Planaria EST Database

DrC_00800

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00800
         (1030 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q60803|TRAF3_MOUSE  TNF receptor-associated factor 3 (CD4...   122   1e-27
sp|O00463|TRAF5_HUMAN  TNF receptor-associated factor 5 (RIN...   120   5e-27
sp|Q13114|TRAF3_HUMAN  TNF receptor-associated factor 3 (CD4...   120   8e-27
sp|P70191|TRAF5_MOUSE  TNF receptor-associated factor 5           115   2e-25
sp|Q12933|TRAF2_HUMAN  TNF receptor-associated factor 2 (Tum...   115   3e-25
sp|P39429|TRAF2_MOUSE  TNF receptor-associated factor 2           115   3e-25
sp|P39428|TRAF1_MOUSE  TNF receptor-associated factor 1           105   2e-22
sp|Q61382|TRAF4_MOUSE  TNF receptor-associated factor 4 (Cys...   105   3e-22
sp|Q13077|TRAF1_HUMAN  TNF receptor-associated factor 1 (Eps...   104   4e-22
sp|Q9BUZ4|TRAF4_HUMAN  TNF receptor-associated factor 4 (Cys...   104   5e-22

>sp|Q60803|TRAF3_MOUSE TNF receptor-associated factor 3 (CD40 receptor associated factor 1)
            (CRAF1) (TRAFAMN)
          Length = 567

 Score =  122 bits (307), Expect = 1e-27
 Identities = 82/309 (26%), Positives = 157/309 (50%), Gaps = 8/309 (2%)
 Frame = +2

Query: 14   LRNVDKYMRDDVDELKLDGKRKQVEIDTLNKKLQEMESKFEIETKSIIEKEFDKLNLDGE 193
            L+     +   V  L+ +   K   I +L+ ++   E + E + + +   E   L+L   
Sbjct: 262  LKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHL--- 318

Query: 194  RKEKSIESLQKKCEQLNKQIEQFNNKYQQIENKFVNAKLERENKEKDLMRNIDETKNKQI 373
              ++ I+S  +K ++L+K+I  F   +++ ++  + + +E        + ++D++  +  
Sbjct: 319  --QRVIDSQAEKLKELDKEIRPFRQNWEEADS--MKSSVESLQNRVTELESVDKSAGQAA 374

Query: 374  EMT----TRSNKIDETMKNVENKLLEIEINQNKMK----NGEFVWRIDKINDKMKDAKNG 529
              T    ++ ++ D+T+   + +L ++++    ++    NG  +W+I     + ++A  G
Sbjct: 375  RNTGLLESQLSRHDQTLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMG 434

Query: 530  INTKIYSDSFYTHKHGYKMCLRVDPDGNGAGKGTHLTVGFHLMKGEFDDISQWPFKYDVT 709
                +YS  FYT   GYKMC RV  +G+G GKGTHL++ F +M+GE+D +  WPFK  VT
Sbjct: 435  KTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVT 494

Query: 710  FSLINQQTRLVHHSETIKYDELPNNKNWNKPIDERNGRMGKFKFIELSELSTNANLILNN 889
              L++Q +   H  +  K D  PN+ ++ KP  E N   G   F+  + L  N   I ++
Sbjct: 495  LMLMDQGSSRRHLGDAFKPD--PNSSSFKKPTGEMNIASGCPVFVAQTVLE-NGTYIKDD 551

Query: 890  QIFIKCSVN 916
             IFIK  V+
Sbjct: 552  TIFIKVIVD 560

>sp|O00463|TRAF5_HUMAN TNF receptor-associated factor 5 (RING finger protein 84)
          Length = 557

 Score =  120 bits (302), Expect = 5e-27
 Identities = 84/295 (28%), Positives = 152/295 (51%), Gaps = 17/295 (5%)
 Frame = +2

Query: 86   EIDTLNKKLQEMESKFE--IETKSIIEKEFDKLNLDGERKEKSIESLQKKCEQLNK---- 247
            +I  L+K L++ ESK +   ET   +EKEF +      +    + ++Q     ++K    
Sbjct: 263  QISDLHKSLEQKESKIQQLAETIKKLEKEFKQFAQLFGKNGSFLPNIQVFASHIDKSAWL 322

Query: 248  --QIEQFNNKYQQIENKF-VNAKLERENKEKDLMRNIDETKNKQIEMTTRSNKIDETMKN 418
              Q+ Q      Q +NKF +   +E  +  K  +  ++    +   +   +NK D T  N
Sbjct: 323  EAQVHQLLQMVNQQQNKFDLRPLMEAVDTVKQKITLLENNDQRLAVLEEETNKHD-THIN 381

Query: 419  VENKLLEIEINQNKMK-------NGEFVWRIDKINDKMKDAKNGINTKIYSDSFYTHKHG 577
            +     ++  N+ + K       NG+ +W++     K ++A +G    I+S SFYT + G
Sbjct: 382  IHKA--QLSKNEERFKLLEGTCYNGKLIWKVTDYKMKKREAVDGHTVSIFSQSFYTSRCG 439

Query: 578  YKMCLRVDPDGNGAGKGTHLTVGFHLMKGEFDDISQWPFKYDVTFSLINQQTRLVHHSET 757
            Y++C R   +G+G+G+G+HL++ F +M+GEFD + QWPF+  VT  L++Q  +  +  ET
Sbjct: 440  YRLCARAYLNGDGSGRGSHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGK-KNIMET 498

Query: 758  IKYDELPNNKNWNKPIDERNGRMGKFKFIELSELSTNAN-LILNNQIFIKCSVNI 919
             K D  PN+ ++ +P  E N   G  +F+  S L    N  I ++ +F+K +V++
Sbjct: 499  FKPD--PNSSSFKRPDGEMNIASGCPRFVAHSVLENAKNAYIKDDTLFLKVAVDL 551

>sp|Q13114|TRAF3_HUMAN TNF receptor-associated factor 3 (CD40 receptor associated factor 1)
            (CRAF1) (CD40 binding protein) (CD40BP) (LMP1 associated
            protein) (LAP1) (CAP-1)
          Length = 568

 Score =  120 bits (300), Expect = 8e-27
 Identities = 81/309 (26%), Positives = 156/309 (50%), Gaps = 8/309 (2%)
 Frame = +2

Query: 14   LRNVDKYMRDDVDELKLDGKRKQVEIDTLNKKLQEMESKFEIETKSIIEKEFDKLNLDGE 193
            L+     +   V  L+ +   K   I +L+ ++   E + E + + +   E   L+L   
Sbjct: 263  LKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHL--- 319

Query: 194  RKEKSIESLQKKCEQLNKQIEQFNNKYQQIENKFVNAKLERENKEKDLMRNIDETKNKQI 373
              ++ I+S  +K ++L+K+I  F   +++ ++  + + +E        + ++D++  +  
Sbjct: 320  --QRVIDSQAEKLKELDKEIRPFRQNWEEADS--MKSSVESLQNRVTELESVDKSAGQVA 375

Query: 374  EMT----TRSNKIDETMKNVENKLLEIEINQNKMK----NGEFVWRIDKINDKMKDAKNG 529
              T    ++ ++ D+ +   + +L ++++    ++    NG  +W+I     + ++A  G
Sbjct: 376  RNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMG 435

Query: 530  INTKIYSDSFYTHKHGYKMCLRVDPDGNGAGKGTHLTVGFHLMKGEFDDISQWPFKYDVT 709
                +YS  FYT   GYKMC RV  +G+G GKGTHL++ F +M+GE+D +  WPFK  VT
Sbjct: 436  KTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVT 495

Query: 710  FSLINQQTRLVHHSETIKYDELPNNKNWNKPIDERNGRMGKFKFIELSELSTNANLILNN 889
              L++Q +   H  +  K D  PN+ ++ KP  E N   G   F+  + L  N   I ++
Sbjct: 496  LMLMDQGSSRRHLGDAFKPD--PNSSSFKKPTGEMNIASGCPVFVAQTVLE-NGTYIKDD 552

Query: 890  QIFIKCSVN 916
             IFIK  V+
Sbjct: 553  TIFIKVIVD 561

>sp|P70191|TRAF5_MOUSE TNF receptor-associated factor 5
          Length = 558

 Score =  115 bits (289), Expect = 2e-25
 Identities = 75/301 (24%), Positives = 145/301 (48%), Gaps = 40/301 (13%)
 Frame = +2

Query: 137  IETKSIIEKEFDKLNLDGERKEKSIESLQKKCEQLNKQIEQFNNKYQQIENKFVNAKLER 316
            +E    +E+    L    E+KE  I+ L +  ++  K+++QF   + +      N +   
Sbjct: 254  LEKNYQLEQRISDLYQSLEQKESKIQQLAETVKKFEKELKQFTQMFGRNGTFLSNVQALT 313

Query: 317  ENKEKD-------------------------LMRNIDETKNKQIEMTTRSNKI----DET 409
             + +K                          L+  +D  K +  ++     ++     ET
Sbjct: 314  SHTDKSAWLEAQVRQLLQIVNQQPSRLDLRSLVDAVDSVKQRITQLEASDQRLVLLEGET 373

Query: 410  MKNVEN-KLLEIEINQNKMK---------NGEFVWRIDKINDKMKDAKNGINTKIYSDSF 559
             K+  +  + + ++N+N+ +         +G+ +W++     K ++A  G    ++S  F
Sbjct: 374  SKHDAHINIHKAQLNKNEERFKQLEGACYSGKLIWKVTDYRVKKREAVEGHTVSVFSQPF 433

Query: 560  YTHKHGYKMCLRVDPDGNGAGKGTHLTVGFHLMKGEFDDISQWPFKYDVTFSLINQQTRL 739
            YT + GY++C R   +G+G+GKGTHL++ F +M+GEFD + QWPF+  VT  L++Q  + 
Sbjct: 434  YTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKK 493

Query: 740  VHHSETIKYDELPNNKNWNKPIDERNGRMGKFKFIELSELSTNAN-LILNNQIFIKCSVN 916
             H  ET K D  PN+ ++ +P  E N   G  +F+  S L  + N  I ++ +F+K +V+
Sbjct: 494  NHIVETFKAD--PNSSSFKRPDGEMNIASGCPRFVSHSTLENSKNTYIKDDTLFLKVAVD 551

Query: 917  I 919
            +
Sbjct: 552  L 552

>sp|Q12933|TRAF2_HUMAN TNF receptor-associated factor 2 (Tumor necrosis factor type 2
            receptor-associated protein 3)
          Length = 501

 Score =  115 bits (287), Expect = 3e-25
 Identities = 80/286 (27%), Positives = 149/286 (52%), Gaps = 3/286 (1%)
 Frame = +2

Query: 71   KRKQVEIDTLNKKLQEMESKFEIETKSIIEKEFDKLNLDGERKEKSIESLQKKCEQLNKQ 250
            K+++ E+  L + L  + S   +E K ++          G++     E LQ+ CE L K+
Sbjct: 231  KQQEHEVQWLREHLAMLLSSV-LEAKPLL----------GDQSHAGSELLQR-CESLEKK 278

Query: 251  IEQFNNKYQQIENKFVNAKLERE--NKEKDLMRNIDETKNKQIEMTTRSNKI-DETMKNV 421
               F N    +  +     +  E  +++  L ++  E  + +++   RS  + D  M ++
Sbjct: 279  TATFENIVCVLNREVERVAMTAEACSRQHRLDQDKIEALSSKVQQLERSIGLKDLAMADL 338

Query: 422  ENKLLEIEINQNKMKNGEFVWRIDKINDKMKDAKNGINTKIYSDSFYTHKHGYKMCLRVD 601
            E K+LE+E +     +G F+W+I     K ++A  G    I+S +FYT ++GYKMCLR+ 
Sbjct: 339  EQKVLEMEASTY---DGVFIWKISDFARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIY 395

Query: 602  PDGNGAGKGTHLTVGFHLMKGEFDDISQWPFKYDVTFSLINQQTRLVHHSETIKYDELPN 781
             +G+G G+GTHL++ F +MKG  D + +WPF   VT  L++Q  R  H  +  + D    
Sbjct: 396  LNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQNNR-EHVIDAFRPD--VT 452

Query: 782  NKNWNKPIDERNGRMGKFKFIELSELSTNANLILNNQIFIKCSVNI 919
            + ++ +P+++ N   G   F  +S++    + + ++ IFIK  V++
Sbjct: 453  SSSFQRPVNDMNIASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVDL 498

>sp|P39429|TRAF2_MOUSE TNF receptor-associated factor 2
          Length = 501

 Score =  115 bits (287), Expect = 3e-25
 Identities = 81/289 (28%), Positives = 143/289 (49%), Gaps = 5/289 (1%)
 Frame = +2

Query: 68   GKRKQVEIDTL-NKKLQEMESKFEIETKSIIEKEFDKLNLDGERKEKSIESLQKKCEQLN 244
            G  + VE + L + +LQ +     +   S +E +     L+    E     L ++C+ L 
Sbjct: 222  GCSEMVETENLQDHELQRLREHLALLLSSFLEAQASPGTLNQVGPE-----LLQRCQILE 276

Query: 245  KQIEQFNNKY----QQIENKFVNAKLERENKEKDLMRNIDETKNKQIEMTTRSNKIDETM 412
            ++I  F N      +++E   V A+        D    I+   NK  ++       D  M
Sbjct: 277  QKIATFENIVCVLNREVERVAVTAEACSRQHRLD-QDKIEALSNKVQQLERSIGLKDLAM 335

Query: 413  KNVENKLLEIEINQNKMKNGEFVWRIDKINDKMKDAKNGINTKIYSDSFYTHKHGYKMCL 592
             ++E K+ E+E++     +G F+W+I     K ++A  G    I+S +FYT ++GYKMCL
Sbjct: 336  ADLEQKVSELEVSTY---DGVFIWKISDFTRKRQEAVAGRTPAIFSPAFYTSRYGYKMCL 392

Query: 593  RVDPDGNGAGKGTHLTVGFHLMKGEFDDISQWPFKYDVTFSLINQQTRLVHHSETIKYDE 772
            RV  +G+G G+GTHL++ F +MKG  D + QWPF   VT  L++   R  H  +  + D 
Sbjct: 393  RVYLNGDGTGRGTHLSLFFVVMKGPNDALLQWPFNQKVTLMLLDHNNR-EHVIDAFRPD- 450

Query: 773  LPNNKNWNKPIDERNGRMGKFKFIELSELSTNANLILNNQIFIKCSVNI 919
               + ++ +P+ + N   G   F  +S++    + + ++ IFIK  V++
Sbjct: 451  -VTSSSFQRPVSDMNIASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVDL 498

>sp|P39428|TRAF1_MOUSE TNF receptor-associated factor 1
          Length = 409

 Score =  105 bits (263), Expect = 2e-22
 Identities = 70/285 (24%), Positives = 149/285 (52%), Gaps = 9/285 (3%)
 Frame = +2

Query: 98  LNKKLQEMESKFEIETKSIIEKEFDKLNLDGERKEKSIESL--QKKCEQLNKQIEQFNN- 268
           L + L E++ +  +E    +E +  +      ++E +++ L  +K   QL +++  F N 
Sbjct: 134 LERNLSELQLQAAVEATGDLEVDCYRAPCCESQEELALQHLVKEKLLAQLEEKLRVFANI 193

Query: 269 -----KYQQIENKFVNAKLERENKEKDLMRNIDETKNKQIEMTTRSNKIDETMKNVENKL 433
                K  +  +  + A + +   +++ + ++++   + +E+     + D+ +  +E+ L
Sbjct: 194 VAVLNKEVEASHLALAASIHQSQLDREHLLSLEQ---RVVELQQTLAQKDQVLGKLEHSL 250

Query: 434 LEIEINQNKMKNGEFVWRIDKINDKMKDAKNGINTKIYSDSFYTHKHGYKMCLRVDPDGN 613
               + +    +G F+W+I  +  +  ++  G    ++S +FYT K+GYK+CLR+  +G+
Sbjct: 251 ---RLMEEASFDGTFLWKITNVTKRCHESVCGRTVSLFSPAFYTAKYGYKLCLRLYLNGD 307

Query: 614 GAGKGTHLTVGFHLMKGEFDDISQWPFKYDVTFSLINQQTRLVHHSETIKYDELPNNKNW 793
           G+GK THL++   +M+GE+D +  WPF+  VTF L++Q  R  H  +  + D   ++ ++
Sbjct: 308 GSGKKTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNR-EHAIDAFRPD--LSSASF 364

Query: 794 NKPIDERNGRMGKFKFIELSEL-STNANLILNNQIFIKCSVNIPA 925
            +P  E N   G   F  LS+L S     + ++ +F+KC V+  A
Sbjct: 365 QRPQSETNVASGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVDTSA 409

>sp|Q61382|TRAF4_MOUSE TNF receptor-associated factor 4 (Cysteine-rich motif associated to
           RING and Traf domains protein 1)
          Length = 470

 Score =  105 bits (261), Expect = 3e-22
 Identities = 62/205 (30%), Positives = 113/205 (55%), Gaps = 11/205 (5%)
 Frame = +2

Query: 341 RNIDETKNKQIEMTTRS-NKIDETMKNVENKLLEIEINQNKMKNGEFVWRIDKINDKMKD 517
           R+++E+    + M     ++  + ++ +  +L E+ I  +    G  +W+I     ++++
Sbjct: 268 RHVEESVKPHLAMMCALVSRQRQELQELRRELEELSIGSD----GVLIWKIGSYGRRLQE 323

Query: 518 AKNGINTKIYSDSFYTHKHGYKMCLRVDPDGNGAGKGTHLTVGFHLMKGEFDDISQWPFK 697
           AK   N + +S +FYTHK+GYK+ +    +GNG+G+GTHL++   ++ G FD++ +WP  
Sbjct: 324 AKAKPNLECFSPAFYTHKYGYKLQVSASLNGNGSGEGTHLSIYIRVLPGAFDNLLEWPLA 383

Query: 698 YDVTFSLINQQ----TRLVHHSETIKYDELPNNKNWNKP------IDERNGRMGKFKFIE 847
             VTFSL++Q      +  H +ET   D  PN KN+ KP      +DE +   G  KFI 
Sbjct: 384 RRVTFSLLDQSDPGLAKPQHVTETFHPD--PNWKNFQKPGTWRGSLDESSLGFGYPKFIS 441

Query: 848 LSELSTNANLILNNQIFIKCSVNIP 922
             ++    N + ++ +FI+ SV +P
Sbjct: 442 HQDI-RKRNYVRDDAVFIRASVELP 465

>sp|Q13077|TRAF1_HUMAN TNF receptor-associated factor 1 (Epstein-Barr virus-induced
           protein 6)
          Length = 416

 Score =  104 bits (260), Expect = 4e-22
 Identities = 70/280 (25%), Positives = 141/280 (50%), Gaps = 8/280 (2%)
 Frame = +2

Query: 98  LNKKLQEMESKFEIETKSIIEKEFDKLNLDGERKEKSIESLQKKCEQLNKQIEQFNNKYQ 277
           L + L +++ +  +E    +E +  +      ++E +++   K+     K + +   K +
Sbjct: 141 LEQNLSDLQLQAAVEVAGDLEVDCYRAPCSESQEELALQHFMKE-----KLLAELEGKLR 195

Query: 278 QIENKFVNAKLERENKEKDLMRNIDET---KNKQIEMTTRSNKIDETMKNVENKLLEIEI 448
             EN       E E     L  +I ++   + + + +  R  ++ +T+   +  L ++E 
Sbjct: 196 VFENIVAVLNKEVEASHLALATSIHQSQLDRERILSLEQRVVELQQTLAQKDQALGKLEQ 255

Query: 449 NQNKMK----NGEFVWRIDKINDKMKDAKNGINTKIYSDSFYTHKHGYKMCLRVDPDGNG 616
           +   M+    +G F+W+I  +  +  ++  G    ++S +FYT K+GYK+CLR+  +G+G
Sbjct: 256 SLRLMEEASFDGTFLWKITNVTRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDG 315

Query: 617 AGKGTHLTVGFHLMKGEFDDISQWPFKYDVTFSLINQQTRLVHHSETIKYDELPNNKNWN 796
            GK THL++   +M+GE+D +  WPF+  VTF L++Q  R  H  +  + D   ++ ++ 
Sbjct: 316 TGKRTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNR-EHAIDAFRPD--LSSASFQ 372

Query: 797 KPIDERNGRMGKFKFIELSEL-STNANLILNNQIFIKCSV 913
           +P  E N   G   F  LS+L S     + ++ +F+KC V
Sbjct: 373 RPQSETNVASGCPLFFPLSKLQSPKHAYVKDDTMFLKCIV 412

>sp|Q9BUZ4|TRAF4_HUMAN TNF receptor-associated factor 4 (Cysteine-rich domain associated
           with RING and Traf domains protein 1) (Malignant 62)
           (RING finger protein 83)
          Length = 470

 Score =  104 bits (259), Expect = 5e-22
 Identities = 61/207 (29%), Positives = 115/207 (55%), Gaps = 11/207 (5%)
 Frame = +2

Query: 335 LMRNIDETKNKQIEMTTRS-NKIDETMKNVENKLLEIEINQNKMKNGEFVWRIDKINDKM 511
           + R+++E+    + M     ++  + ++ +  +L E+ +  +    G  +W+I     ++
Sbjct: 266 MARHVEESVKPHLAMMCALVSRQRQELQELRRELEELSVGSD----GVLIWKIGSYGRRL 321

Query: 512 KDAKNGINTKIYSDSFYTHKHGYKMCLRVDPDGNGAGKGTHLTVGFHLMKGEFDDISQWP 691
           ++AK   N + +S +FYTHK+GYK+ +    +GNG+G+GTHL++   ++ G FD++ +WP
Sbjct: 322 QEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSLYIRVLPGAFDNLLEWP 381

Query: 692 FKYDVTFSLINQQ----TRLVHHSETIKYDELPNNKNWNKP------IDERNGRMGKFKF 841
           F   VTFSL++Q      +  H +ET   D  PN KN+ KP      +DE +   G  KF
Sbjct: 382 FARRVTFSLLDQSDPGLAKPQHVTETFHPD--PNWKNFQKPGTWRGSLDESSLGFGYPKF 439

Query: 842 IELSELSTNANLILNNQIFIKCSVNIP 922
           I   ++    N + ++ +FI+ +V +P
Sbjct: 440 ISHQDI-RKRNYVRDDAVFIRAAVELP 465

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,781,850
Number of Sequences: 369166
Number of extensions: 1995264
Number of successful extensions: 10411
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9978
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 11053210245
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00800

  1. Dr_sW_020_J12
  2. Dr_sW_026_G20