Planaria EST Database

DrC_00795

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00795
         (830 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9Y5Y2|NUBP2_HUMAN  Nucleotide binding protein 2 (NBP 2)       222   9e-58
sp|Q9R060|NUBP1_MOUSE  Nucleotide-binding protein 1 (NBP 1)       218   1e-56
sp|Q9R061|NUBP2_MOUSE  Nucleotide binding protein 2 (NBP 2)       213   4e-55
sp|P53384|NUBP1_HUMAN  Nucleotide-binding protein 1 (NBP 1)       207   4e-53
sp|P40558|YIA3_YEAST  Hypothetical 31.9 kDa protein in BET1-...   206   5e-53
sp|P52920|NBP35_YEAST  NBP35 protein                              189   8e-48
sp|Q93459|MRPL_CAEEL  Mrp-family putative nucleotide-binding...   188   1e-47
sp|Q57731|Y283_METJA  Hypothetical ATP-binding protein MJ0283     171   2e-42
sp|Q9V0D9|Y851_PYRAB  Hypothetical ATP-binding protein PYRAB...   160   4e-39
sp|O58667|Y949_PYRHO  Hypothetical ATP-binding protein PH0949     155   2e-37

>sp|Q9Y5Y2|NUBP2_HUMAN Nucleotide binding protein 2 (NBP 2)
          Length = 271

 Score =  222 bits (566), Expect = 9e-58
 Identities = 108/262 (41%), Positives = 166/262 (63%), Gaps = 1/262 (0%)
 Frame = +3

Query: 6   IGNVKQIVFXXXXXXXXXXXTVATQLALSLWRSNHSVGLLDIDLCGPSIPRMLGVENKEV 185
           +  V+ I+            T++T+LAL+L  +   VG+LD+DLCGPSIPRMLG + + V
Sbjct: 10  LAGVRHIILVLSGKGGVGKSTISTELALALRHAGKKVGILDVDLCGPSIPRMLGAQGRAV 69

Query: 186 RKCDSSWLPVYADAGSAESSPRFAVMSIGFLLARPTDSVIWKGAKKDSMIKSLLNQVQWG 365
            +CD  W PV+ D   + S     +MS+GFLL +P ++V+W+G KK+++IK  ++ V WG
Sbjct: 70  HQCDRGWAPVFLDREQSIS-----LMSVGFLLEKPDEAVVWRGPKKNALIKQFVSDVAWG 124

Query: 366 SLDFLIIDTPPGTSDEKI-TLATVIKQQHLSRFSGAILVSTPQMVALSDVRKEISFYQKI 542
            LD+L++DTPPGTSDE + T+  +   Q L    GA++V+TPQ V++ DVR+E++F +K 
Sbjct: 125 ELDYLVVDTPPGTSDEHMATIEALRPYQPL----GALVVTTPQAVSVGDVRRELTFCRKT 180

Query: 543 NLPILGLIENMSGLCCPRCGNIDRVFSTGGGEALAAARQIPFLGCLPMLPDIAASADTDH 722
            L ++G++ENMSG  CP C     VFS GGGE LA    +PFLG +P+ P +  + +  H
Sbjct: 181 GLRVMGIVENMSGFTCPHCTECTSVFSRGGGEELAQLAGVPFLGSVPLDPALMRTLEEGH 240

Query: 723 GFLVKSGCCPSNSAFSDLMAKI 788
            F+ +    P+ +A + +  KI
Sbjct: 241 DFIQEFPGSPAFAALTSIAQKI 262

>sp|Q9R060|NUBP1_MOUSE Nucleotide-binding protein 1 (NBP 1)
          Length = 320

 Score =  218 bits (556), Expect = 1e-56
 Identities = 105/227 (46%), Positives = 150/227 (66%), Gaps = 2/227 (0%)
 Frame = +3

Query: 114 VGLLDIDLCGPSIPRMLGVENKEVRKCDSSWLPVYADAGSAESSPRFAVMSIGFLLARPT 293
           V LLDID+CGPSIP+++G+E ++V +  S W PVY D           VMS+GFLL+ P 
Sbjct: 87  VALLDIDICGPSIPKIMGLEGEQVHQSGSGWSPVYVD-------DNLGVMSVGFLLSSPD 139

Query: 294 DSVIWKGAKKDSMIKSLLNQVQWGSLDFLIIDTPPGTSDEKITLATVIKQQHLSRFSGAI 473
           D+VIW+G KK+ MIK  L  V WG +D+LI+DTPPGTSDE +++   +   H+    GA+
Sbjct: 140 DAVIWRGPKKNGMIKQFLRDVDWGDVDYLIVDTPPGTSDEHLSVVQYLAAAHI---DGAV 196

Query: 474 LVSTPQMVALSDVRKEISFYQKINLPILGLIENMSGLCCPRCGNIDRVF--STGGGEALA 647
           +++TPQ VAL DVRKEISF  K+ LPI+G++ENMSG  CP+C    ++F  +TGG EA+ 
Sbjct: 197 ILTTPQEVALQDVRKEISFCHKVKLPIIGVVENMSGFICPKCKKESQIFPPTTGGAEAMC 256

Query: 648 AARQIPFLGCLPMLPDIAASADTDHGFLVKSGCCPSNSAFSDLMAKI 788
              +IP LG +P+ P I  S D    F V++   P+ +A+  ++ +I
Sbjct: 257 QDLRIPLLGKVPLDPHIGKSCDKGQSFFVEAPDSPATAAYRSIIQRI 303

>sp|Q9R061|NUBP2_MOUSE Nucleotide binding protein 2 (NBP 2)
          Length = 275

 Score =  213 bits (543), Expect = 4e-55
 Identities = 104/257 (40%), Positives = 158/257 (61%)
 Frame = +3

Query: 6   IGNVKQIVFXXXXXXXXXXXTVATQLALSLWRSNHSVGLLDIDLCGPSIPRMLGVENKEV 185
           +  V+ I+            T++T+LAL+L      VG+LD+DLCGPSIP ML  + K V
Sbjct: 14  LAGVRHIILVLSGKGGVGKSTISTELALALRHQGKKVGILDVDLCGPSIPHMLRAQGKAV 73

Query: 186 RKCDSSWLPVYADAGSAESSPRFAVMSIGFLLARPTDSVIWKGAKKDSMIKSLLNQVQWG 365
            +CD+ W+PV+ D   + S     +MS+GFLL  P ++V+W+G KK ++IK  ++ V WG
Sbjct: 74  HQCDNGWVPVFVDQEQSIS-----LMSVGFLLENPDEAVVWRGPKKHALIKQFVSDVAWG 128

Query: 366 SLDFLIIDTPPGTSDEKITLATVIKQQHLSRFSGAILVSTPQMVALSDVRKEISFYQKIN 545
            LD+L++DTPPGTSDE +     ++     R  GA++V+TPQ V++ DVR+E++F +K  
Sbjct: 129 QLDYLVVDTPPGTSDEHMATMEALRPY---RPLGALVVTTPQAVSIGDVRRELTFCKKTG 185

Query: 546 LPILGLIENMSGLCCPRCGNIDRVFSTGGGEALAAARQIPFLGCLPMLPDIAASADTDHG 725
           L ++G+IENMSG  CP C     VFS+G GE LA    +PFLG +P+   +  S +    
Sbjct: 186 LQVIGVIENMSGFTCPHCAECTNVFSSGSGEELARLAGVPFLGSVPLDSQLTRSLEEGRD 245

Query: 726 FLVKSGCCPSNSAFSDL 776
           F+ +    P ++A+S L
Sbjct: 246 FIQE---FPKSTAYSAL 259

>sp|P53384|NUBP1_HUMAN Nucleotide-binding protein 1 (NBP 1)
          Length = 320

 Score =  207 bits (526), Expect = 4e-53
 Identities = 96/231 (41%), Positives = 149/231 (64%), Gaps = 2/231 (0%)
 Frame = +3

Query: 105 NHSVGLLDIDLCGPSIPRMLGVENKEVRKCDSSWLPVYADAGSAESSPRFAVMSIGFLLA 284
           N  + LLDID+CGPSIP+++G+E ++V +  S W PVY +           VMS+GFLL+
Sbjct: 84  NTQIALLDIDICGPSIPKIMGLEGEQVHQSGSGWSPVYVE-------DNLGVMSVGFLLS 136

Query: 285 RPTDSVIWKGAKKDSMIKSLLNQVQWGSLDFLIIDTPPGTSDEKITLATVIKQQHLSRFS 464
            P D+VIW+G KK+ MIK  L  V WG +D+LI+DTPPGTSDE +++   +   H+    
Sbjct: 137 SPDDAVIWRGPKKNGMIKQFLRDVDWGEVDYLIVDTPPGTSDEHLSVVRYLATAHI---D 193

Query: 465 GAILVSTPQMVALSDVRKEISFYQKINLPILGLIENMSGLCCPRCGNIDRVF--STGGGE 638
           GA++++TPQ ++L DVRKEI+F +K+ LPI+G++ENMS   CP+C    ++F  +TGG E
Sbjct: 194 GAVIITTPQELSLQDVRKEINFCRKVKLPIIGVVENMSPFICPKCKKESQIFPPTTGGAE 253

Query: 639 ALAAARQIPFLGCLPMLPDIAASADTDHGFLVKSGCCPSNSAFSDLMAKIE 791
            +    ++P LG +P+ P I  + D    F + +   P+  A+  ++ +I+
Sbjct: 254 LMCQDLEVPLLGRVPLDPLIGKNCDKGQSFFIDAPDSPATLAYRSIIQRIQ 304

>sp|P40558|YIA3_YEAST Hypothetical 31.9 kDa protein in BET1-PAN1 intergenic region
          Length = 293

 Score =  206 bits (525), Expect = 5e-53
 Identities = 112/268 (41%), Positives = 161/268 (60%), Gaps = 7/268 (2%)
 Frame = +3

Query: 6   IGNVKQIVFXXXXXXXXXXXTVATQLALSLWRSNHSVGLLDIDLCGPSIPRMLGVENKEV 185
           +  +K I+            +V TQ AL+L      VG+LDIDL GPS+PRM G+EN+ +
Sbjct: 13  LAGIKHIILILSGKGGVGKSSVTTQTALTLCSMGFKVGVLDIDLTGPSLPRMFGLENESI 72

Query: 186 RKCDSSWLPVYADAGSAESSPRFAVMSIGFLLARPTDSVIWKGAKKDSMIKSLLNQVQWG 365
            +    W PV  +  S  S    +V+S+GFLL    +SVIW+G KK SMIK  ++ V WG
Sbjct: 73  YQGPEGWQPVKVETNSTGS---LSVISLGFLLGDRGNSVIWRGPKKTSMIKQFISDVAWG 129

Query: 366 SLDFLIIDTPPGTSDEKITLATVIKQQHLSRFSGAILVSTPQMVALSDVRKEISFYQKIN 545
            LD+L+IDTPPGTSDE I++A  ++    S+  G I+V+TPQ VA +DV+KEI+F +K++
Sbjct: 130 ELDYLLIDTPPGTSDEHISIAEELRY---SKPDGGIVVTTPQSVATADVKKEINFCKKVD 186

Query: 546 LPILGLIENMSGLCCPRCGNIDRVFSTGGGEALAAARQIPFLGCLP-------MLPDIAA 704
           L ILG+IENMSG  CP C     +FS+GGG+ L+    +P+LG +P       M+ +  +
Sbjct: 187 LKILGIIENMSGFVCPHCAECTNIFSSGGGKRLSEQFSVPYLGNVPIDPKFVEMIENQVS 246

Query: 705 SADTDHGFLVKSGCCPSNSAFSDLMAKI 788
           S  T      +S  CP    F ++M K+
Sbjct: 247 SKKTLVEMYRESSLCP---IFEEIMKKL 271

>sp|P52920|NBP35_YEAST NBP35 protein
          Length = 328

 Score =  189 bits (480), Expect = 8e-48
 Identities = 99/219 (45%), Positives = 135/219 (61%), Gaps = 2/219 (0%)
 Frame = +3

Query: 114 VGLLDIDLCGPSIPRMLGVENKEVRKCDSSWLPVYADAGSAESSPRFAVMSIGFLLARPT 293
           VG +D+D+CGPS+P MLG   + V + +S W PVY        +   A MSI ++L    
Sbjct: 105 VGAMDLDICGPSLPHMLGCIKETVHESNSGWTPVYV-------TDNLATMSIQYMLPEDD 157

Query: 294 DSVIWKGAKKDSMIKSLLNQVQWGSLDFLIIDTPPGTSDEKITLATVIKQQHLSRFSGAI 473
            ++IW+G+KK+ +IK  L  V W  LD+L+IDTPPGTSDE I++   +++   S   GA+
Sbjct: 158 SAIIWRGSKKNLLIKKFLKDVDWDKLDYLVIDTPPGTSDEHISINKYMRE---SGIDGAL 214

Query: 474 LVSTPQMVALSDVRKEISFYQKINLPILGLIENMSGLCCPRCGNIDRVF--STGGGEALA 647
           +V+TPQ VAL DVRKEI F +K  + ILGL+ENMSG  CP C    ++F  +TGGGEAL 
Sbjct: 215 VVTTPQEVALLDVRKEIDFCKKAGINILGLVENMSGFVCPNCKGESQIFKATTGGGEALC 274

Query: 648 AARQIPFLGCLPMLPDIAASADTDHGFLVKSGCCPSNSA 764
               I FLG +P+ P I  S D    FL      P++SA
Sbjct: 275 KELGIKFLGSVPLDPRIGKSCDMGESFLDNYPDSPASSA 313

>sp|Q93459|MRPL_CAEEL Mrp-family putative nucleotide-binding protein F10G8.6
          Length = 313

 Score =  188 bits (478), Expect = 1e-47
 Identities = 103/245 (42%), Positives = 142/245 (57%), Gaps = 3/245 (1%)
 Frame = +3

Query: 66  TVATQLALSLWRS-NHSVGLLDIDLCGPSIPRMLGVENKEVRKCDSSWLPVYADAGSAES 242
           T+ + LA +L    +  V +LD+D+CGPS PRM+GVE++EV      W PV         
Sbjct: 74  TLTSNLARALASDPSKQVAILDVDICGPSQPRMMGVEDEEVHNSADGWTPVGIQ------ 127

Query: 243 SPRFAVMSIGFLLARPTDSVIWKGAKKDSMIKSLLNQVQWGSLDFLIIDTPPGTSDEKIT 422
            P   +MSI FLL    D+VIW+GA+K+ MIK  L  V WG +D+L+IDTPPGTSDE I+
Sbjct: 128 -PNLTLMSIAFLLGDKNDAVIWRGARKNGMIKQFLKDVDWGEVDYLLIDTPPGTSDEHIS 186

Query: 423 LATVIKQQHLSRFSGAILVSTPQMVALSDVRKEISFYQKINLPILGLIENMSGLCCPRCG 602
           L   + Q       GA++VSTPQ V+L DVRKE+SF  K  +PILG++ENM+   CP C 
Sbjct: 187 LVQFLLQ--AGPLDGALIVSTPQEVSLLDVRKEVSFCVKTKVPILGVVENMARFVCPNCA 244

Query: 603 NIDRVF--STGGGEALAAARQIPFLGCLPMLPDIAASADTDHGFLVKSGCCPSNSAFSDL 776
           +   +F  STGG E +     +  L  LP+ P +A + D    F   +       +F DL
Sbjct: 245 HTTLLFPTSTGGAEQMCKDSNLELLAQLPLEPALAKALDNGEDFFETNPDSTLAKSFLDL 304

Query: 777 MAKIE 791
             K++
Sbjct: 305 AEKVK 309

>sp|Q57731|Y283_METJA Hypothetical ATP-binding protein MJ0283
          Length = 290

 Score =  171 bits (433), Expect = 2e-42
 Identities = 94/241 (39%), Positives = 135/241 (56%)
 Frame = +3

Query: 66  TVATQLALSLWRSNHSVGLLDIDLCGPSIPRMLGVENKEVRKCDSSWLPVYADAGSAESS 245
           TV   LA +L      VG+LD D+ GP+IP+MLGVEN +     +   P+    G     
Sbjct: 55  TVTVNLAAALNLMGKKVGVLDADIHGPNIPKMLGVENTQPMAGPAGIFPIVTKDG----- 109

Query: 246 PRFAVMSIGFLLARPTDSVIWKGAKKDSMIKSLLNQVQWGSLDFLIIDTPPGTSDEKITL 425
                MSIG+LL      VIW+G K    I+  L+ V WG LD+L+IDTPPGT DE++T+
Sbjct: 110 --IKTMSIGYLLPDDKTPVIWRGPKVSGAIRQFLSDVVWGELDYLLIDTPPGTGDEQLTI 167

Query: 426 ATVIKQQHLSRFSGAILVSTPQMVALSDVRKEISFYQKINLPILGLIENMSGLCCPRCGN 605
                 Q +    GAI+V+TP+ V++ DV+K I   + +N+PI+G+IENMSG  CP C  
Sbjct: 168 -----MQSIPDIDGAIIVTTPEEVSVLDVKKSIMMAKMLNIPIIGIIENMSGFVCPYCNK 222

Query: 606 IDRVFSTGGGEALAAARQIPFLGCLPMLPDIAASADTDHGFLVKSGCCPSNSAFSDLMAK 785
           +  +F  GGGE  A    + FLG +P+  DI A   +D G  +    C ++  F  ++ +
Sbjct: 223 VVDIFGRGGGEKAAKELGVEFLGRIPL--DIKAREASDKGIPMVLLDCKASEEFKKIVKR 280

Query: 786 I 788
           I
Sbjct: 281 I 281

>sp|Q9V0D9|Y851_PYRAB Hypothetical ATP-binding protein PYRAB08510
          Length = 295

 Score =  160 bits (405), Expect = 4e-39
 Identities = 100/248 (40%), Positives = 144/248 (58%), Gaps = 7/248 (2%)
 Frame = +3

Query: 66  TVATQLALSLWRSNHSVGLLDIDLCGPSIPRMLGVENKEV--RKCDSS---WLPVYADAG 230
           TVA  L  +L +  + VG+LD D+ GP++ +MLGVE +E+   K D      +P  AD  
Sbjct: 46  TVAVNLTAALAKMGYFVGILDADIHGPNVAKMLGVEKEEIYAEKFDDGHFEMIPPMADF- 104

Query: 231 SAESSPRFAVMSIGFLLARPTDS-VIWKGAKKDSMIKSLLNQVQWGSLDFLIIDTPPGTS 407
             + +P   VMS+G ++  P D  +IW+GA     IK LL  V+WGSLDF+IID PPGT 
Sbjct: 105 MGQVTP-IKVMSMGMMV--PEDQPIIWRGALVTKAIKQLLGDVKWGSLDFMIIDFPPGTG 161

Query: 408 DEKITLATVIKQQHLSRFSGAILVSTPQMVALSDVRKEISFYQKINLPILGLIENMSGLC 587
           DE +T+   I+         AI+V+TPQ VAL D  K ++  +K+ +P + ++ENMS L 
Sbjct: 162 DEILTVVQSIQ------LDAAIIVTTPQEVALLDTGKAVNMMKKMEVPYIAVVENMSYLI 215

Query: 588 CPRCGNIDRVFSTGGGEALAAARQIPFLGCLPMLPDIAASADTDHGF-LVKSGCCPSNSA 764
           CP CGN   +F  GGGE LA    + FLG +P+  D+ A   +D G  +V  G  P+  A
Sbjct: 216 CPHCGNKIDIFGEGGGEKLAEKEGVDFLGKIPI--DLKAREASDLGIPIVLYGDTPAAKA 273

Query: 765 FSDLMAKI 788
           F ++  K+
Sbjct: 274 FMEIAEKL 281

>sp|O58667|Y949_PYRHO Hypothetical ATP-binding protein PH0949
          Length = 295

 Score =  155 bits (391), Expect = 2e-37
 Identities = 100/248 (40%), Positives = 141/248 (56%), Gaps = 7/248 (2%)
 Frame = +3

Query: 66  TVATQLALSLWRSNHSVGLLDIDLCGPSIPRMLGVENKEV--RKCDSS---WLPVYADAG 230
           TVA  L  +L +  + VG+LD D+ GP++ +MLGV+ +EV   K D      +P   D  
Sbjct: 46  TVAVNLTAALAKMGYFVGILDADIHGPNVAKMLGVDKEEVYAEKFDDGHFEMIPPTTDF- 104

Query: 231 SAESSPRFAVMSIGFLLARPTDS-VIWKGAKKDSMIKSLLNQVQWGSLDFLIIDTPPGTS 407
             + +P   VMS+G ++  P D  VIW+G      IK LL  V+WGSLDF+IID PPGT 
Sbjct: 105 MGQVTP-IKVMSMGMMV--PEDQPVIWRGPLVTKAIKQLLGDVKWGSLDFMIIDFPPGTG 161

Query: 408 DEKITLATVIKQQHLSRFSGAILVSTPQMVALSDVRKEISFYQKINLPILGLIENMSGLC 587
           DE +T+   IK         AI+V+TPQ VAL D  K ++  +K+ +P + ++ENMS L 
Sbjct: 162 DEILTVVQSIK------LDAAIIVTTPQEVALLDTGKAVNMMKKMEVPYVAVVENMSYLI 215

Query: 588 CPRCGNIDRVFSTGGGEALAAARQIPFLGCLPMLPDIAASADTDHGF-LVKSGCCPSNSA 764
           CP CGN   +F  GGGE LA    + FLG +P+  D+ A   +D G  +V     P+  A
Sbjct: 216 CPHCGNKIDIFGEGGGEKLAQKEGVDFLGKIPI--DLKAREASDLGIPIVLYEDTPAAKA 273

Query: 765 FSDLMAKI 788
           F +L  K+
Sbjct: 274 FMELAEKL 281

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,968,901
Number of Sequences: 369166
Number of extensions: 2510815
Number of successful extensions: 7890
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7823
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8052550455
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00795

  1. Dr_sW_020_I01
  2. Dr_sW_021_G22
  3. Dr_sW_014_D22