Planaria EST Database

DrC_00779

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00779
         (1389 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P35224|CTNB_URECA  Beta-catenin                                139   3e-32
sp|P18824|ARM_DROME  Armadillo segment polarity protein           137   7e-32
sp|Q02453|ARM_MUSDO  Armadillo segment polarity protein           135   4e-31
sp|P35223|CTNB_TRIGR  Beta-catenin                                133   1e-30
sp|P26233|CTNB_XENLA  Beta-catenin                                133   1e-30
sp|Q02248|CTNB1_MOUSE  Beta-catenin                               133   1e-30
sp|P35222|CTNB1_HUMAN  Beta-catenin                               133   1e-30
sp|Q9WU82|CTNB1_RAT  Beta-catenin                                 133   1e-30
sp|P14923|PLAK_HUMAN  Junction plakoglobin (Desmoplakin III)      126   1e-28
sp|Q8SPJ1|PLAK_BOVIN  Junction plakoglobin (Desmoplakin III)      126   1e-28

>sp|P35224|CTNB_URECA Beta-catenin
          Length = 818

 Score =  139 bits (349), Expect = 3e-32
 Identities = 85/251 (33%), Positives = 138/251 (54%), Gaps = 4/251 (1%)
 Frame = +2

Query: 5    EPCICTLRHISSRHEEAEAAQASILHFQGLQILIRIIEMQLGPDLFHMQSHQPIMPNLFL 184
            EP +C LRH++SRH EAE AQ ++    GL +L++++             H P       
Sbjct: 484  EPAVCALRHLTSRHGEAEMAQNAVRLHYGLPVLVKLL-------------HPPS------ 524

Query: 185  SYYKINWSLIKAIIGLIRNLAMSPCNFVPIREKGFGWPMIVLINRAQIDLLNKTACASIS 364
                  W LIKA++GLIRNLA+ P N  P+RE G    ++ L+ RA  D   +    S +
Sbjct: 525  -----RWPLIKAVVGLIRNLALCPANHAPLREHGAIPRIVQLLIRAHQDTQRRATAGSGN 579

Query: 365  PKDKL----LEEIIEVSCGALHMLAKDPGIRSQIISMKIWQRLINYPQQIGTQSCVFVIA 532
                +    +EEI+E + GALH++A++   R+ I  +                +C+ + A
Sbjct: 580  TSAYVDGVRMEEIVEGTVGALHIMAREAHNRAVIRGL----------------NCISLFA 623

Query: 533  SLLFNHLESIQRVTAGLLVEVSGERMGLELIISQIVITNKLSEMVHSNNEAISTYASAIL 712
             LL++ +++IQRV AG+L E++ ++ G E+ I Q   T  L+E++HS NE ++TYA+A+L
Sbjct: 624  QLLYSPIDNIQRVAAGVLCELAADKEGAEM-IEQEGTTAPLTELLHSRNEGVATYAAAVL 682

Query: 713  IRATEEKNKRY 745
             R +E+K + Y
Sbjct: 683  FRMSEDKPQDY 693

>sp|P18824|ARM_DROME Armadillo segment polarity protein
          Length = 843

 Score =  137 bits (345), Expect = 7e-32
 Identities = 90/282 (31%), Positives = 147/282 (52%), Gaps = 12/282 (4%)
 Frame = +2

Query: 5    EPCICTLRHISSRHEEAEAAQASILHFQGLQILIRIIEMQLGPDLFHMQSHQPIMPNLFL 184
            EP +C LRH++SRH ++E AQ ++    GL ++++++             H P       
Sbjct: 470  EPAVCALRHLTSRHVDSELAQNAVRLNYGLSVIVKLL-------------HPPS------ 510

Query: 185  SYYKINWSLIKAIIGLIRNLAMSPCNFVPIREKGFGWPMIVLINRAQIDLLNKTACASIS 364
                  W LIKA+IGLIRNLA+ P N  P+RE G    ++ L+ RA  D   + +  + +
Sbjct: 511  -----RWPLIKAVIGLIRNLALCPANHAPLREHGAIHHLVRLLMRAFQDTERQRSSIATT 565

Query: 365  PKDK--------LLEEIIEVSCGALHMLAKDPGIRSQIISMKIWQRLINYPQQIGTQSCV 520
               +         +EEI+E + GALH+LA++   R+                 I  QS +
Sbjct: 566  GSQQPSAYADGVRMEEIVEGTVGALHILARESHNRA----------------LIRQQSVI 609

Query: 521  FVIASLLFNHLESIQRVTAGLLVEVSGERMGLELIISQIVITNKLSEMVHSNNEAISTYA 700
             +   LLFN +E+IQRV AG+L E++ ++ G E II Q   T  L++++HS NE ++TYA
Sbjct: 610  PIFVRLLFNEIENIQRVAAGVLCELAADKEGAE-IIEQEGATGPLTDLLHSRNEGVATYA 668

Query: 701  SAILIRATEEK----NKRYATSHNYNVAQNPNNLRNNLSISL 814
            +A+L R +E+K     KR +     ++ +  NN+  N  + +
Sbjct: 669  AAVLFRMSEDKPQDYKKRLSIELTNSLLREDNNIWANADLGM 710

>sp|Q02453|ARM_MUSDO Armadillo segment polarity protein
          Length = 813

 Score =  135 bits (339), Expect = 4e-31
 Identities = 89/283 (31%), Positives = 145/283 (51%), Gaps = 13/283 (4%)
 Frame = +2

Query: 5    EPCICTLRHISSRHEEAEAAQASILHFQGLQILIRIIEMQLGPDLFHMQSHQPIMPNLFL 184
            EP +C LRH+++RH ++E AQ ++    GL ++++++             H P       
Sbjct: 460  EPAVCALRHLTTRHADSEMAQNAVRLNYGLSVIVKLL-------------HPPS------ 500

Query: 185  SYYKINWSLIKAIIGLIRNLAMSPCNFVPIREKGFGWPMIVLINRAQIDLLNKTACASIS 364
                  W LIKA IGL+RNLA+ P N  P+RE G    ++ L+ RA  D   + +  + +
Sbjct: 501  -----RWPLIKAAIGLVRNLALCPANAAPLREHGAIHHLVRLLMRAFQDTERQRSSVATT 555

Query: 365  PKDK--------LLEEIIEVSCGALHMLAKDPGIRSQIISMKIWQRLINYPQQIGTQSCV 520
               +         +EEI+E + GALH+LA++   R+                 I  QS +
Sbjct: 556  GSQQPAAYADGVRMEEIVEGTVGALHILARESHNRA----------------LIRQQSVI 599

Query: 521  FVIASLLFNHLESIQRVTAGLLVEVSGERMGLELIISQIVITNKLSEMVHSNNEAISTYA 700
             +   LLFN +E+IQRV AG+L E++ ++ G E II Q   T  L++++HS NE ++TYA
Sbjct: 600  PIFVRLLFNEIENIQRVAAGVLCELAADKEGAE-IIEQEGATGPLTDLLHSRNEGVATYA 658

Query: 701  SAILIRATEEKNKRYATSHNYNVAQN-----PNNLRNNLSISL 814
            +A+L R +E+K + Y    +  +  N      NN+  N  + L
Sbjct: 659  AAVLFRMSEDKPQDYKKRLSIELTTNSLLREDNNIWGNADLGL 701

>sp|P35223|CTNB_TRIGR Beta-catenin
          Length = 820

 Score =  133 bits (335), Expect = 1e-30
 Identities = 83/253 (32%), Positives = 136/253 (53%), Gaps = 6/253 (2%)
 Frame = +2

Query: 5    EPCICTLRHISSRHEEAEAAQASILHFQGLQILIRIIEMQLGPDLFHMQSHQPIMPNLFL 184
            EP +C LRH++SRH  AE  Q ++    G+ ++++++             H P       
Sbjct: 478  EPAVCALRHVTSRHPGAEMGQNTVRLNYGIPVIVKLL-------------HPPS------ 518

Query: 185  SYYKINWSLIKAIIGLIRNLAMSPCNFVPIREKGFGWPMIVLINRAQIDLLNKTACASIS 364
                  W LIKA +GLIRNLA+   N  P+RE+G    ++ L+ RA  D   +++  S  
Sbjct: 519  -----RWPLIKATVGLIRNLALCSANHAPLREQGALHRLVQLLMRAHQDTQRRSSMGSTG 573

Query: 365  PK------DKLLEEIIEVSCGALHMLAKDPGIRSQIISMKIWQRLINYPQQIGTQSCVFV 526
             +         +E+I+E + GALH+LA+D   R+ I  +                +C+ +
Sbjct: 574  SQGGNYADGVRMEDIVEGTTGALHILARDSHNRALIQGL----------------NCIPL 617

Query: 527  IASLLFNHLESIQRVTAGLLVEVSGERMGLELIISQIVITNKLSEMVHSNNEAISTYASA 706
               LL+N++E+IQRV AG+L E+S E+ G E+ I Q   T  L+E++HS NE ++TYA+A
Sbjct: 618  FVQLLYNNIENIQRVAAGVLSELSLEKQGAEM-IEQEGATAPLTELLHSRNEGVATYAAA 676

Query: 707  ILIRATEEKNKRY 745
            +L R +++K + Y
Sbjct: 677  VLYRMSDDKPQDY 689

>sp|P26233|CTNB_XENLA Beta-catenin
          Length = 781

 Score =  133 bits (335), Expect = 1e-30
 Identities = 86/250 (34%), Positives = 138/250 (55%), Gaps = 3/250 (1%)
 Frame = +2

Query: 5    EPCICTLRHISSRHEEAEAAQASILHFQGLQILIRIIEMQLGPDLFHMQSHQPIMPNLFL 184
            EP IC LRH++SRH+EAE AQ ++    GL ++++++         H  SH         
Sbjct: 462  EPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLL---------HPPSH--------- 503

Query: 185  SYYKINWSLIKAIIGLIRNLAMSPCNFVPIREKGFGWPMIVLINRAQIDLLNKTACASIS 364
                  W LIKA +GLIRNLA+ P N  P+RE+G    ++ L+ RA  D   +T+     
Sbjct: 504  ------WPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSIGGTQ 557

Query: 365  P---KDKLLEEIIEVSCGALHMLAKDPGIRSQIISMKIWQRLINYPQQIGTQSCVFVIAS 535
                +   +EEI+E   GALH+LA+D  I ++I+              I   + + +   
Sbjct: 558  QQFVEGVRMEEIVEGCTGALHILARD--IHNRIV--------------IRGLNTIPLFVQ 601

Query: 536  LLFNHLESIQRVTAGLLVEVSGERMGLELIISQIVITNKLSEMVHSNNEAISTYASAILI 715
            LL++ +E+IQRV AG+L +V+ ++   E I ++   T  L+E++HS NE ++TYA+A+L 
Sbjct: 602  LLYSPIENIQRVAAGVLCDVAQDKEAAEAIEAE-GATAPLTELLHSRNEGVATYAAAVLF 660

Query: 716  RATEEKNKRY 745
            R +E+K + Y
Sbjct: 661  RMSEDKPQDY 670

>sp|Q02248|CTNB1_MOUSE Beta-catenin
          Length = 781

 Score =  133 bits (334), Expect = 1e-30
 Identities = 85/250 (34%), Positives = 138/250 (55%), Gaps = 3/250 (1%)
 Frame = +2

Query: 5    EPCICTLRHISSRHEEAEAAQASILHFQGLQILIRIIEMQLGPDLFHMQSHQPIMPNLFL 184
            EP IC LRH++SRH+EAE AQ ++    GL ++++++         H  SH         
Sbjct: 462  EPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLL---------HPPSH--------- 503

Query: 185  SYYKINWSLIKAIIGLIRNLAMSPCNFVPIREKGFGWPMIVLINRAQIDLLNKTACASIS 364
                  W LIKA +GLIRNLA+ P N  P+RE+G    ++ L+ RA  D   +T+     
Sbjct: 504  ------WPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQ 557

Query: 365  P---KDKLLEEIIEVSCGALHMLAKDPGIRSQIISMKIWQRLINYPQQIGTQSCVFVIAS 535
                +   +EEI+E   GALH+LA+D  + ++I+              I   + + +   
Sbjct: 558  QQFVEGVRMEEIVEGCTGALHILARD--VHNRIV--------------IRGLNTIPLFVQ 601

Query: 536  LLFNHLESIQRVTAGLLVEVSGERMGLELIISQIVITNKLSEMVHSNNEAISTYASAILI 715
            LL++ +E+IQRV AG+L E++ ++   E I ++   T  L+E++HS NE ++TYA+A+L 
Sbjct: 602  LLYSPIENIQRVAAGVLCELAQDKEAAEAIEAE-GATAPLTELLHSRNEGVATYAAAVLF 660

Query: 716  RATEEKNKRY 745
            R +E+K + Y
Sbjct: 661  RMSEDKPQDY 670

>sp|P35222|CTNB1_HUMAN Beta-catenin
          Length = 781

 Score =  133 bits (334), Expect = 1e-30
 Identities = 85/250 (34%), Positives = 138/250 (55%), Gaps = 3/250 (1%)
 Frame = +2

Query: 5    EPCICTLRHISSRHEEAEAAQASILHFQGLQILIRIIEMQLGPDLFHMQSHQPIMPNLFL 184
            EP IC LRH++SRH+EAE AQ ++    GL ++++++         H  SH         
Sbjct: 462  EPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLL---------HPPSH--------- 503

Query: 185  SYYKINWSLIKAIIGLIRNLAMSPCNFVPIREKGFGWPMIVLINRAQIDLLNKTACASIS 364
                  W LIKA +GLIRNLA+ P N  P+RE+G    ++ L+ RA  D   +T+     
Sbjct: 504  ------WPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQ 557

Query: 365  P---KDKLLEEIIEVSCGALHMLAKDPGIRSQIISMKIWQRLINYPQQIGTQSCVFVIAS 535
                +   +EEI+E   GALH+LA+D  + ++I+              I   + + +   
Sbjct: 558  QQFVEGVRMEEIVEGCTGALHILARD--VHNRIV--------------IRGLNTIPLFVQ 601

Query: 536  LLFNHLESIQRVTAGLLVEVSGERMGLELIISQIVITNKLSEMVHSNNEAISTYASAILI 715
            LL++ +E+IQRV AG+L E++ ++   E I ++   T  L+E++HS NE ++TYA+A+L 
Sbjct: 602  LLYSPIENIQRVAAGVLCELAQDKEAAEAIEAE-GATAPLTELLHSRNEGVATYAAAVLF 660

Query: 716  RATEEKNKRY 745
            R +E+K + Y
Sbjct: 661  RMSEDKPQDY 670

>sp|Q9WU82|CTNB1_RAT Beta-catenin
          Length = 781

 Score =  133 bits (334), Expect = 1e-30
 Identities = 85/250 (34%), Positives = 138/250 (55%), Gaps = 3/250 (1%)
 Frame = +2

Query: 5    EPCICTLRHISSRHEEAEAAQASILHFQGLQILIRIIEMQLGPDLFHMQSHQPIMPNLFL 184
            EP IC LRH++SRH+EAE AQ ++    GL ++++++         H  SH         
Sbjct: 462  EPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLL---------HPPSH--------- 503

Query: 185  SYYKINWSLIKAIIGLIRNLAMSPCNFVPIREKGFGWPMIVLINRAQIDLLNKTACASIS 364
                  W LIKA +GLIRNLA+ P N  P+RE+G    ++ L+ RA  D   +T+     
Sbjct: 504  ------WPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQ 557

Query: 365  P---KDKLLEEIIEVSCGALHMLAKDPGIRSQIISMKIWQRLINYPQQIGTQSCVFVIAS 535
                +   +EEI+E   GALH+LA+D  + ++I+              I   + + +   
Sbjct: 558  QQFVEGVRMEEIVEGCTGALHILARD--VHNRIV--------------IRGLNTIPLFVQ 601

Query: 536  LLFNHLESIQRVTAGLLVEVSGERMGLELIISQIVITNKLSEMVHSNNEAISTYASAILI 715
            LL++ +E+IQRV AG+L E++ ++   E I ++   T  L+E++HS NE ++TYA+A+L 
Sbjct: 602  LLYSPIENIQRVAAGVLCELAQDKEAAEAIEAE-GATAPLTELLHSRNEGVATYAAAVLF 660

Query: 716  RATEEKNKRY 745
            R +E+K + Y
Sbjct: 661  RMSEDKPQDY 670

>sp|P14923|PLAK_HUMAN Junction plakoglobin (Desmoplakin III)
          Length = 744

 Score =  126 bits (317), Expect = 1e-28
 Identities = 84/249 (33%), Positives = 129/249 (51%), Gaps = 2/249 (0%)
 Frame = +2

Query: 5    EPCICTLRHISSRHEEAEAAQASILHFQGLQILIRIIEMQLGPDLFHMQSHQPIMPNLFL 184
            EP +C LRH++SRH EAE AQ S+    G+  +++++                  PN   
Sbjct: 452  EPAVCALRHLTSRHPEAEMAQNSVRLNYGIPAIVKLLNQ----------------PN--- 492

Query: 185  SYYKINWSLIKAIIGLIRNLAMSPCNFVPIREKGFGWPMIVLINRAQIDLLNKTACASIS 364
                  W L+KA IGLIRNLA+ P N  P++E      ++ L+ +A  D     A  +  
Sbjct: 493  -----QWPLVKATIGLIRNLALCPANHAPLQEAAVIPRLVQLLVKAHQDAQRHVAAGTQQ 547

Query: 365  P--KDKLLEEIIEVSCGALHMLAKDPGIRSQIISMKIWQRLINYPQQIGTQSCVFVIASL 538
            P      +EEI+E   GALH+LA+DP  R +I       RL   P          +   L
Sbjct: 548  PYTDGVRMEEIVEGCTGALHILARDPMNRMEIF------RLNTIP----------LFVQL 591

Query: 539  LFNHLESIQRVTAGLLVEVSGERMGLELIISQIVITNKLSEMVHSNNEAISTYASAILIR 718
            L++ +E+IQRV AG+L E++ ++   + I ++   +  L E++HS NE  +TYA+A+L R
Sbjct: 592  LYSSVENIQRVAAGVLCELAQDKEAADAIDAE-GASAPLMELLHSRNEGTATYAAAVLFR 650

Query: 719  ATEEKNKRY 745
             +E+KN  Y
Sbjct: 651  ISEDKNPDY 659

>sp|Q8SPJ1|PLAK_BOVIN Junction plakoglobin (Desmoplakin III)
          Length = 745

 Score =  126 bits (317), Expect = 1e-28
 Identities = 84/249 (33%), Positives = 129/249 (51%), Gaps = 2/249 (0%)
 Frame = +2

Query: 5    EPCICTLRHISSRHEEAEAAQASILHFQGLQILIRIIEMQLGPDLFHMQSHQPIMPNLFL 184
            EP +C LRH++SRH EAE AQ S+    G+  +++++                  PN   
Sbjct: 453  EPAVCALRHLTSRHPEAEMAQNSVRLNYGIPAIVKLLNQ----------------PN--- 493

Query: 185  SYYKINWSLIKAIIGLIRNLAMSPCNFVPIREKGFGWPMIVLINRAQIDLLNKTACASIS 364
                  W L+KA IGLIRNLA+ P N  P++E      ++ L+ +A  D     A  +  
Sbjct: 494  -----QWPLVKATIGLIRNLALCPANHAPLQEAAVIPRLVQLLVKAHQDAQRHVAAGTQQ 548

Query: 365  P--KDKLLEEIIEVSCGALHMLAKDPGIRSQIISMKIWQRLINYPQQIGTQSCVFVIASL 538
            P      +EEI+E   GALH+LA+DP  R +I       RL   P          +   L
Sbjct: 549  PYTDGVRMEEIVEGCTGALHILARDPMNRMEIF------RLNTIP----------LFVQL 592

Query: 539  LFNHLESIQRVTAGLLVEVSGERMGLELIISQIVITNKLSEMVHSNNEAISTYASAILIR 718
            L++ +E+IQRV AG+L E++ ++   + I ++   +  L E++HS NE  +TYA+A+L R
Sbjct: 593  LYSSVENIQRVAAGVLCELAQDKEAADAIDAE-GASAPLMELLHSRNEGTATYAAAVLFR 651

Query: 719  ATEEKNKRY 745
             +E+KN  Y
Sbjct: 652  ISEDKNPDY 660

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 157,569,630
Number of Sequences: 369166
Number of extensions: 3193927
Number of successful extensions: 7644
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7583
length of database: 68,354,980
effective HSP length: 114
effective length of database: 47,295,190
effective search space used: 16458726120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00779

  1. Dr_sW_020_C07
  2. Dr_sW_006_L13