DrC_00774
- Cluster detail
- GO Category : Not Available
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_00774 (603 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|P74148|Y1388_SYNY3 Hypothetical protein sll1388 51 2e-06 sp|P72745|Y1101_SYNY3 Hypothetical protein slr1101 44 2e-04 sp|P64922|YK28_MYCBO Hypothetical protein Mb2028c >gi|54042... 42 0.002 sp|P42297|YXIE_BACSU Hypothetical protein yxiE precursor 40 0.005 sp|Q57951|Y531_METJA Hypothetical protein MJ0531 38 0.023 sp|P10506|BYR1_SCHPO Protein kinase byr1 (MAPK kinase) (MAPKK) 35 0.19 sp|Q57997|Y577_METJA Protein MJ0577 35 0.19 sp|O62653|SUIS_SUNMU Sucrase-isomaltase, intestinal [Contai... 33 0.73 sp|O07552|NHAX_BACSU Stress response protein nhaX 32 1.2 sp|P72817|Y1654_SYNY3 Hypothetical protein sll1654 32 1.6
>sp|P74148|Y1388_SYNY3 Hypothetical protein sll1388 Length = 154 Score = 51.2 bits (121), Expect = 2e-06 Identities = 25/76 (32%), Positives = 41/76 (53%) Frame = +1 Query: 256 LQKLQAEAQTLEAKFMEQCKKNDLKCSWKTSLGSPNLNLVHAVEENNADLVVMGSRGLNL 435 L++ Q EA+ ++Q +++ + C W +G P + + +ADLVV+G RGL Sbjct: 69 LEEQQTEAREWLQSIVQQVQEDGVACEWDVKVGEPGRWIRDMAKNWDADLVVLGRRGLKG 128 Query: 436 FRRTLVGSVSTYVTQH 483 +GSVS+YV H Sbjct: 129 LAEVFLGSVSSYVIHH 144
>sp|P72745|Y1101_SYNY3 Hypothetical protein slr1101 Length = 108 Score = 44.3 bits (103), Expect = 2e-04 Identities = 24/77 (31%), Positives = 38/77 (49%) Frame = +1 Query: 253 QLQKLQAEAQTLEAKFMEQCKKNDLKCSWKTSLGSPNLNLVHAVEENNADLVVMGSRGLN 432 Q Q + E K +Q D++C + LGSP + +++N+D++V+G RG Sbjct: 20 QWQTFEQEGLDTLEKRRQQALALDIECQAEQILGSPGKIICQRAKQDNSDIIVVGHRGRW 79 Query: 433 LFRRTLVGSVSTYVTQH 483 L+GSV YV H Sbjct: 80 GLSEILLGSVGNYVFHH 96
>sp|P64922|YK28_MYCBO Hypothetical protein Mb2028c sp|P64921|YK05_MYCTU Hypothetical protein Rv2005c/MT2061 Length = 295 Score = 41.6 bits (96), Expect = 0.002 Identities = 39/140 (27%), Positives = 60/140 (42%), Gaps = 2/140 (1%) Frame = +1 Query: 55 PINKRTVVIGIDGSKYSDDAFNWFQNHYAQPNTDEIILHHSICPSASVSAPIFKGIPTNP 234 P + VV+G+DGS SD A W A N ++H V+A + P Sbjct: 4 PRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVH-------VVNADVATWPPMPY 56 Query: 235 DKDYTVQLQKLQAEAQTLEAKFMEQCKKNDLKCSWKTSL--GSPNLNLVHAVEENNADLV 408 + + V + + K ++ D K S K+ L +P +V N A++V Sbjct: 57 PETWGVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSELVFSTPVPTMVEI--SNEAEMV 114 Query: 409 VMGSRGLNLFRRTLVGSVST 468 V+GS G R L+GSVS+ Sbjct: 115 VLGSSGRGALARGLLGSVSS 134
>sp|P42297|YXIE_BACSU Hypothetical protein yxiE precursor Length = 148 Score = 40.0 bits (92), Expect = 0.005 Identities = 32/136 (23%), Positives = 63/136 (46%) Frame = +1 Query: 73 VVIGIDGSKYSDDAFNWFQNHYAQPNTDEIILHHSICPSASVSAPIFKGIPTNPDKDYTV 252 +++ IDGS S A + H A+ E+ + H + A V+ GI P+ Sbjct: 5 MLVAIDGSDMSAKALD-AAVHLAKEQQAELSILH-VGREAVVTTSSLTGIVYVPEHFIDE 62 Query: 253 QLQKLQAEAQTLEAKFMEQCKKNDLKCSWKTSLGSPNLNLVHAVEENNADLVVMGSRGLN 432 +++ E + E+ + ++ + G P +++ +E L+V+GSRG++ Sbjct: 63 IRNEVKKEGLKILENAKEKAAEKGVQAETIYANGEPAHEILNHAKEKGVSLIVVGSRGIS 122 Query: 433 LFRRTLVGSVSTYVTQ 480 + ++GSVS V+Q Sbjct: 123 GLKEMMLGSVSHKVSQ 138
>sp|Q57951|Y531_METJA Hypothetical protein MJ0531 Length = 170 Score = 37.7 bits (86), Expect = 0.023 Identities = 35/139 (25%), Positives = 60/139 (43%) Frame = +1 Query: 67 RTVVIGIDGSKYSDDAFNWFQNHYAQPNTDEIILHHSICPSASVSAPIFKGIPTNPDKDY 246 + +VI DGS S +A N + + + ++ V F G+P + Sbjct: 27 KKIVIPTDGSDVSLEAAKHAINIAKEFDAEVYAIY-------VVDVSPFVGLPAEGSWEL 79 Query: 247 TVQLQKLQAEAQTLEAKFMEQCKKNDLKCSWKTSLGSPNLNLVHAVEENNADLVVMGSRG 426 +L L+ E Q K + ++ +K + G P +V E+ ADL+VMG+ G Sbjct: 80 ISEL--LKEEGQEALKKVKKMAEEWGVKIHTEMLEGVPANEIVEFAEKKKADLIVMGTTG 137 Query: 427 LNLFRRTLVGSVSTYVTQH 483 R L+GSV+ V ++ Sbjct: 138 KTGLERILLGSVAERVIKN 156
>sp|P10506|BYR1_SCHPO Protein kinase byr1 (MAPK kinase) (MAPKK) Length = 340 Score = 34.7 bits (78), Expect = 0.19 Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 9/93 (9%) Frame = +1 Query: 214 KGIPTNP-------DKDYTVQLQKLQAEAQTLEAKFMEQCKKNDLKCSWKTSLGSPNLNL 372 KG+ NP D D+ +L Q ++ FMEQC + + +W + L + +L + Sbjct: 9 KGLVLNPNASVKSSDNDHKEELINNQKSFESNVEAFMEQCAHMNRRPAWISDLDNSSLEV 68 Query: 373 V-HAVEENNADLVVMGSRGLNLFRRTL-VGSVS 465 V H E N + ++ R + + R+T+ VGS S Sbjct: 69 VRHLGEGNGGAVSLVKHRNIFMARKTVYVGSDS 101
>sp|Q57997|Y577_METJA Protein MJ0577 Length = 162 Score = 34.7 bits (78), Expect = 0.19 Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 6/113 (5%) Frame = +1 Query: 154 DEIILHHSICPSASVSAPIFK------GIPTNPDKDYTVQLQKLQAEAQTLEAKFMEQCK 315 +E+IL H I IF G+ + ++ KL EA+ ++ + Sbjct: 34 EEVILLHVIDEREIKKRDIFSLLLGVAGLNKSVEEFENELKNKLTEEAKNKMENIKKELE 93 Query: 316 KNDLKCSWKTSLGSPNLNLVHAVEENNADLVVMGSRGLNLFRRTLVGSVSTYV 474 K +G P+ +V E+ D+++MGS G + L+GSV+ V Sbjct: 94 DVGFKVKDIIVVGIPHEEIVKIAEDEGVDIIIMGSHGKTNLKEILLGSVTENV 146
>sp|O62653|SUIS_SUNMU Sucrase-isomaltase, intestinal [Contains: Sucrase ; Isomaltase ] Length = 1813 Score = 32.7 bits (73), Expect = 0.73 Identities = 18/72 (25%), Positives = 35/72 (48%) Frame = +1 Query: 148 NTDEIILHHSICPSASVSAPIFKGIPTNPDKDYTVQLQKLQAEAQTLEAKFMEQCKKNDL 327 N + I+H+S AS + I + N K++TVQ ++ +++ ++ F + +N Sbjct: 880 NNQQTIIHNSFTYHASNQSLIIDNLKLNLGKNFTVQWNQVSLDSEKIDC-FPDNNPENKQ 938 Query: 328 KCSWKTSLGSPN 363 C + L PN Sbjct: 939 NCEERGCLWEPN 950
>sp|O07552|NHAX_BACSU Stress response protein nhaX Length = 166 Score = 32.0 bits (71), Expect = 1.2 Identities = 31/150 (20%), Positives = 63/150 (42%), Gaps = 7/150 (4%) Frame = +1 Query: 37 ILYDKMPINKRTVVIGIDGSKYSDDAFNWFQNHYAQPNTDEIILHHSICPSASVSA---- 204 + +D +K+ ++ ID +K + A +H + N I ++ +S Sbjct: 9 VAFDGSENSKKALLTAIDLAKTVNAAITVAHSHDMKDNQTVIDPPRPAAEASYISGGMTS 68 Query: 205 ---PIFKGIPTNPDKDYTVQLQKLQAEAQTLEAKFMEQCKKNDLKCSWKTSLGSPNLNLV 375 P+ + + Y + +++ AEA+ + EQ D+ G P +++ Sbjct: 69 VPDPLISDVTSPEPMIYEDRTEEVIAEARMM---LNEQQADGDIDILE----GDPAESII 121 Query: 376 HAVEENNADLVVMGSRGLNLFRRTLVGSVS 465 +AD++V GSR N ++ + GSVS Sbjct: 122 EHANRISADMIVTGSRDQNRLKKLIFGSVS 151
>sp|P72817|Y1654_SYNY3 Hypothetical protein sll1654 Length = 157 Score = 31.6 bits (70), Expect = 1.6 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = +1 Query: 352 GSPNLNLVHAVEENNADLVVMGSRGLNLFRRTLVGSVSTYV 474 G + + +E NADL+VMG RGL L + SV+ V Sbjct: 105 GMASFTICDVADEVNADLIVMGCRGLGLTTEGVAESVTARV 145
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,723,493
Number of Sequences: 369166
Number of extensions: 1088772
Number of successful extensions: 3018
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3016
length of database: 68,354,980
effective HSP length: 105
effective length of database: 48,957,805
effective search space used: 4650991475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Cluster detail
