Planarian EST Database

DrC_00752

Cluster detail
GO Category :
Consensus Sequence :
>DrC_00752 CTGCTGAAAAGAAACAGAAAGAAAATCTATCAAAGAAACAAGCTAAATTGAATAAAAAGA AAGATGAAGAAGATGAAGATATTGGTCCAACCGAGTTATTGGAGAAGCCTAAAGAATATC AAGTCAAGTTTGATTTTCCAAATCCACAAAAACTAAGCGGATCCATTCTTAGTTTAACTA ATGTTTCATTTGCTTATTCCAAAACATCAACTGATCTCTTTACAAAAGTTGATTTTGGAG TTGATATGAACTCAAGAGTCTCAATAGTTGGACCGAACGGCGTGGGAAAATCAACATTTT TGAAGCTGTTAACTGGAGAAATCGAACCGACAATCGGAGAACGATCATTGAACCACCGAA TCAAATTGGGCAAATACAATCAGCATTCCGGCGACCAGTTGAACATGAAAGAAACACCAG TTGAATACCTGCGCAGGTTATTCAATCTGGGTTACCAAGACGCCAGACAGAACCTGGGCA GATTTGGTCTCGAGAGTCACGCGCACGAAATACCGAACTCCAGTTTAAGTGGAGGTCAAA GGGCAAGAGTTGCTTTTGCTCAGCTCGCTCTAACGAAACCTGATTTGTTGATTTTGGATG AACCTACAAACAATTTGGATCTGGAATCCATTGAGGCTCTCTGTAAAGCCATCGAGCAAT ACGAAGGAGGAGTCGTTGTTGTCACTCACGACGAAAGGCTCATTAGACAAACTGATTGCT CGCTTTGGGTGGTTGAAAACAAAAATATTTTTGAAATCGATGGAGAATTTGATGATTACA GAAAAGAAGTGTTGAATGCTCTTAACGAAGAAATTTCCAATCCCTCCGCTGTTGCTGCCG CAGCAGGTGTTATGGATTAAATTGGTGATCCAATCGATGCTTCTTTCTGTTTTCAAATAA ATTTTATCAGATTGC

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00752
         (915 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6P542|ABCF1_MOUSE  ATP-binding cassette sub-family F mem...   304   3e-82
sp|Q6MG08|ABCF1_RAT  ATP-binding cassette sub-family F membe...   303   4e-82
sp|Q767L0|ABCF1_PIG  ATP-binding cassette sub-family F member 1   301   1e-81
sp|Q8NE71|ABCF1_HUMAN  ATP-binding cassette sub-family F mem...   300   4e-81
sp|Q7YR37|ABCF1_PANTR  ATP-binding cassette sub-family F mem...   300   4e-81
sp|P40024|YEM6_YEAST  Probable ATP-dependent transporter YER...   192   8e-49
sp|Q9UG63|ABCF2_HUMAN  ATP-binding cassette sub-family F mem...   186   8e-47
sp|Q99LE6|ABCF2_MOUSE  ATP-binding cassette sub-family F mem...   186   8e-47
sp|P43535|GCN20_YEAST  Protein GCN20                              157   3e-38
sp|P63390|YHES_ECO57  Hypothetical ABC transporter ATP-bindi...   151   2e-36

>sp|Q6P542|ABCF1_MOUSE ATP-binding cassette sub-family F member 1
          Length = 837

 Score =  304 bits (778), Expect = 3e-82
 Identities = 149/245 (60%), Positives = 189/245 (77%)
 Frame = +3

Query: 87   PTELLEKPKEYQVKFDFPNPQKLSGSILSLTNVSFAYSKTSTDLFTKVDFGVDMNSRVSI 266
            P ELL++PKEY V+F FP+P  LS  +L L  V+F Y +    LF  +DFG+DM+SR+ I
Sbjct: 590  PPELLKRPKEYTVRFTFPDPPPLSPPVLGLHGVTFGY-EGQKPLFKNLDFGIDMDSRICI 648

Query: 267  VGPNGVGKSTFLKLLTGEIEPTIGERSLNHRIKLGKYNQHSGDQLNMKETPVEYLRRLFN 446
            VGPNGVGKST L LLTG++ PT GE   NHR+K+G +NQ   +QL+M+ETP EYL+R FN
Sbjct: 649  VGPNGVGKSTLLLLLTGKLTPTNGEMRKNHRLKIGFFNQQYAEQLHMEETPTEYLQRSFN 708

Query: 447  LGYQDARQNLGRFGLESHAHEIPNSSLSGGQRARVAFAQLALTKPDLLILDEPTNNLDLE 626
            L YQDAR+ LGRFGLESHAH I    LSGGQ+ARV FA+LA  +PD+LILDEPTNNLD+E
Sbjct: 709  LPYQDARKCLGRFGLESHAHTIQICKLSGGQKARVVFAELACREPDVLILDEPTNNLDIE 768

Query: 627  SIEALCKAIEQYEGGVVVVTHDERLIRQTDCSLWVVENKNIFEIDGEFDDYRKEVLNALN 806
            SI+AL +AI  Y+G V+VV+HD RLI +T+C LWVVE + + +IDG+FDDY++EVL AL 
Sbjct: 769  SIDALGEAINDYKGAVIVVSHDARLITETNCQLWVVEEQGVSQIDGDFDDYKREVLEALG 828

Query: 807  EEISN 821
            E + N
Sbjct: 829  EVMVN 833


 Score = 74.3 bits (181), Expect = 4e-13
 Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 31/230 (13%)
 Frame = +3

Query: 189 FAYSKTSTDLFTKVDFGVDMNSRVSIVGPNGVGKSTFLKLLTGE---IEPTIGE------ 341
           F+ S    +LF   D  +    R  +VGPNG GK+T LK +      I P I        
Sbjct: 301 FSISAHGKELFVNADLYIVAGRRYGLVGPNGKGKTTLLKHIANRALSIPPNIDVLLCEQE 360

Query: 342 -------------RSLNHRIKLGKYNQHSGDQLNM-KETPVEYLRRLFN--------LGY 455
                        R+   R++L +  +    QL    +T  E L +++            
Sbjct: 361 VVADETPAVQAVLRADTKRLRLLEEERRLQGQLEQGDDTAAEKLEKVYEELRATGAAAAE 420

Query: 456 QDARQNLGRFGLESHAHEIPNSSLSGGQRARVAFAQLALTKPDLLILDEPTNNLDLESIE 635
             AR+ L   G +      P    SGG R RV+ A+    +P LL+LDEPTN+LDL ++ 
Sbjct: 421 AKARRILAGLGFDPEMQNRPTQKFSGGWRMRVSLARALFMEPTLLMLDEPTNHLDLNAVI 480

Query: 636 ALCKAIEQYEGGVVVVTHDERLIRQTDCSLWVVENKNIFEIDGEFDDYRK 785
            L   ++ +   +++V+HD+  +      +  ++ + +    G +  ++K
Sbjct: 481 WLNNYLQGWRKTLLIVSHDQGFLDDVCTDIIHLDTQRLHYYRGNYMTFKK 530

>sp|Q6MG08|ABCF1_RAT ATP-binding cassette sub-family F member 1 (ATP-binding cassette 50)
          Length = 839

 Score =  303 bits (776), Expect = 4e-82
 Identities = 148/245 (60%), Positives = 191/245 (77%)
 Frame = +3

Query: 87   PTELLEKPKEYQVKFDFPNPQKLSGSILSLTNVSFAYSKTSTDLFTKVDFGVDMNSRVSI 266
            P ELL++P+EY V+F FP+P  LS  +L L  V+F Y +    LF  +DFG+DM+SR+ I
Sbjct: 592  PPELLKRpreYTVRFTFPDPPPLSPPVLGLHGVTFGY-EGQKPLFKNLDFGIDMDSRICI 650

Query: 267  VGPNGVGKSTFLKLLTGEIEPTIGERSLNHRIKLGKYNQHSGDQLNMKETPVEYLRRLFN 446
            VGPNGVGKST L LLTG++ PT GE   NHR+K+G +NQ   +QL+M+ETP EYL+R FN
Sbjct: 651  VGPNGVGKSTLLLLLTGKLTPTNGEMRKNHRLKIGFFNQQYAEQLHMEETPTEYLQRGFN 710

Query: 447  LGYQDARQNLGRFGLESHAHEIPNSSLSGGQRARVAFAQLALTKPDLLILDEPTNNLDLE 626
            L YQDAR+ LGRFGLESHAH I    LSGGQ+ARV FA+LA  +PD+LILDEPTNNLD+E
Sbjct: 711  LPYQDARKCLGRFGLESHAHTIQICKLSGGQKARVVFAELACREPDVLILDEPTNNLDIE 770

Query: 627  SIEALCKAIEQYEGGVVVVTHDERLIRQTDCSLWVVENKNIFEIDGEFDDYRKEVLNALN 806
            SI+AL +AI +Y+G V+VV+HD RLI +T+C LWVVE +++ +IDG+FDDY++EVL AL 
Sbjct: 771  SIDALGEAINEYKGAVIVVSHDARLITETNCQLWVVEEQSVSQIDGDFDDYKREVLEALG 830

Query: 807  EEISN 821
            E + N
Sbjct: 831  EVMVN 835


 Score = 74.3 bits (181), Expect = 4e-13
 Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 31/230 (13%)
 Frame = +3

Query: 189 FAYSKTSTDLFTKVDFGVDMNSRVSIVGPNGVGKSTFLKLLTGE---IEPTIGE------ 341
           F+ S    +LF   D  +    R  +VGPNG GK+T LK +      I P I        
Sbjct: 303 FSISAHGKELFVNADLYIVAGRRYGLVGPNGKGKTTLLKHIANRALSIPPNIDVLLCEQE 362

Query: 342 -------------RSLNHRIKLGKYNQHSGDQLNM-KETPVEYLRRLFN--------LGY 455
                        R+   R++L +  +    QL    +T  E L +++            
Sbjct: 363 VVADETPAVQAVLRADTKRLRLLEEEKRLQGQLEQGDDTAAEKLEKVYEELRATGAAAAE 422

Query: 456 QDARQNLGRFGLESHAHEIPNSSLSGGQRARVAFAQLALTKPDLLILDEPTNNLDLESIE 635
             AR+ L   G +      P    SGG R RV+ A+    +P LL+LDEPTN+LDL ++ 
Sbjct: 423 AKARRILAGLGFDPEMQNRPTQKFSGGWRMRVSLARALFMEPTLLMLDEPTNHLDLNAVI 482

Query: 636 ALCKAIEQYEGGVVVVTHDERLIRQTDCSLWVVENKNIFEIDGEFDDYRK 785
            L   ++ +   +++V+HD+  +      +  ++ + +    G +  ++K
Sbjct: 483 WLNNYLQGWRKTLLIVSHDQGFLDDVCTDIIHLDTQRLHYYRGNYMTFKK 532

>sp|Q767L0|ABCF1_PIG ATP-binding cassette sub-family F member 1
          Length = 807

 Score =  301 bits (772), Expect = 1e-81
 Identities = 154/269 (57%), Positives = 196/269 (72%)
 Frame = +3

Query: 3    AEKKQKENLSXXXXXXXXXXXXXXXXIGPTELLEKPKEYQVKFDFPNPQKLSGSILSLTN 182
            AEK+ KE L+                  P ELL++PKEY V+F FP+P  LS  +L L  
Sbjct: 533  AEKQTKEALTRKQQKCRRKNQDEESQEAP-ELLKRPKEYTVRFTFPDPPPLSPPVLGLHG 591

Query: 183  VSFAYSKTSTDLFTKVDFGVDMNSRVSIVGPNGVGKSTFLKLLTGEIEPTIGERSLNHRI 362
            V+F Y +    LF  +DFG+DM+SR+ IVGPNGVGKST L LLTG++ PT GE   NHR+
Sbjct: 592  VTFGY-EGQKPLFKNLDFGIDMDSRICIVGPNGVGKSTLLLLLTGKLTPTRGEMRKNHRL 650

Query: 363  KLGKYNQHSGDQLNMKETPVEYLRRLFNLGYQDARQNLGRFGLESHAHEIPNSSLSGGQR 542
            K+G +NQ   +QL M+ETP EYL+R FNL YQDAR+ LGRFGLESHAH I    LSGGQ+
Sbjct: 651  KIGFFNQQYAEQLRMEETPTEYLQRGFNLPYQDARKCLGRFGLESHAHTIQICKLSGGQK 710

Query: 543  ARVAFAQLALTKPDLLILDEPTNNLDLESIEALCKAIEQYEGGVVVVTHDERLIRQTDCS 722
            ARV FA+LA  +PD+LILDEPTNNLD+ESI+AL +AI +Y+G V+VV+HD RLI +T+C 
Sbjct: 711  ARVVFAELACREPDVLILDEPTNNLDIESIDALGEAINEYKGAVIVVSHDARLITETNCQ 770

Query: 723  LWVVENKNIFEIDGEFDDYRKEVLNALNE 809
            LWVVE +++ +IDG+FDDY++EVL AL E
Sbjct: 771  LWVVEEQSVSQIDGDFDDYKREVLEALGE 799


 Score = 73.6 bits (179), Expect = 7e-13
 Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 31/230 (13%)
 Frame = +3

Query: 189 FAYSKTSTDLFTKVDFGVDMNSRVSIVGPNGVGKSTFLKLLTGE---IEPTIGE------ 341
           F+ S    +LF   D  +    R  +VGPNG GK+T LK +      I P I        
Sbjct: 271 FSISAHGKELFVNADLYIVAGRRYGLVGPNGKGKTTLLKHIANRALSIPPNIDVLLCEQE 330

Query: 342 -------------RSLNHRIKLGKYNQHSGDQLNM-KETPVEYLRRLFN--------LGY 455
                        R+   R+KL +  +    QL    +T  + L +++            
Sbjct: 331 VVADETPAVQAVLRADTKRLKLLEEERRLQGQLEQGDDTAADRLEKVYEELRATGAAAAE 390

Query: 456 QDARQNLGRFGLESHAHEIPNSSLSGGQRARVAFAQLALTKPDLLILDEPTNNLDLESIE 635
             AR+ L   G +      P    SGG R RV+ A+    +P LL+LDEPTN+LDL ++ 
Sbjct: 391 AKARRILAGLGFDPEMQNRPTQKFSGGWRMRVSLARALFMEPTLLMLDEPTNHLDLNAVI 450

Query: 636 ALCKAIEQYEGGVVVVTHDERLIRQTDCSLWVVENKNIFEIDGEFDDYRK 785
            L   ++ +   +++V+HD+  +      +  ++ + +    G +  ++K
Sbjct: 451 WLNNYLQGWRKTLLIVSHDQGFLDDVCTDIIHLDAQRLHYYRGNYMTFKK 500

>sp|Q8NE71|ABCF1_HUMAN ATP-binding cassette sub-family F member 1 (ATP-binding cassette 50)
            (TNF-alpha-stimulated ABC protein)
          Length = 845

 Score =  300 bits (768), Expect = 4e-81
 Identities = 153/269 (56%), Positives = 196/269 (72%)
 Frame = +3

Query: 3    AEKKQKENLSXXXXXXXXXXXXXXXXIGPTELLEKPKEYQVKFDFPNPQKLSGSILSLTN 182
            AEK+ KE L+                  P ELL++PKEY V+F FP+P  LS  +L L  
Sbjct: 571  AEKQTKEALTRKQQKCRRKNQDEESQEAP-ELLKRPKEYTVRFTFPDPPPLSPPVLGLHG 629

Query: 183  VSFAYSKTSTDLFTKVDFGVDMNSRVSIVGPNGVGKSTFLKLLTGEIEPTIGERSLNHRI 362
            V+F Y +    LF  +DFG+DM+SR+ IVGPNGVGKST L LLTG++ PT GE   NHR+
Sbjct: 630  VTFGY-QGQKPLFKNLDFGIDMDSRICIVGPNGVGKSTLLLLLTGKLTPTHGEMRKNHRL 688

Query: 363  KLGKYNQHSGDQLNMKETPVEYLRRLFNLGYQDARQNLGRFGLESHAHEIPNSSLSGGQR 542
            K+G +NQ   +QL M+ETP EYL+R FNL YQDAR+ LGRFGLESHAH I    LSGGQ+
Sbjct: 689  KIGFFNQQYAEQLRMEETPTEYLQRGFNLPYQDARKCLGRFGLESHAHTIQICKLSGGQK 748

Query: 543  ARVAFAQLALTKPDLLILDEPTNNLDLESIEALCKAIEQYEGGVVVVTHDERLIRQTDCS 722
            ARV FA+LA  +PD+LILDEPTNNLD+ESI+AL +AI +Y+G V+VV+HD RLI +T+C 
Sbjct: 749  ARVVFAELACREPDVLILDEPTNNLDIESIDALGEAINEYKGAVIVVSHDARLITETNCQ 808

Query: 723  LWVVENKNIFEIDGEFDDYRKEVLNALNE 809
            LWVVE +++ +IDG+F+DY++EVL AL E
Sbjct: 809  LWVVEEQSVSQIDGDFEDYKREVLEALGE 837


 Score = 74.7 bits (182), Expect = 3e-13
 Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 31/230 (13%)
 Frame = +3

Query: 189 FAYSKTSTDLFTKVDFGVDMNSRVSIVGPNGVGKSTFLKLLTGE---IEPTIGE------ 341
           F+ S    +LF   D  +    R  +VGPNG GK+T LK +      I P I        
Sbjct: 309 FSISAHGKELFVNADLYIVAGRRYGLVGPNGKGKTTLLKHIANRALSIPPNIDVLLCEQE 368

Query: 342 -------------RSLNHRIKLGKYNQHSGDQLNM-KETPVEYLRRLFN--------LGY 455
                        R+   R+KL +  +    QL    +T  E L +++            
Sbjct: 369 VVADETPAVQAVLRADTKRLKLLEEERRLQGQLEQGDDTAAERLEKVYEELRATGAAAAE 428

Query: 456 QDARQNLGRFGLESHAHEIPNSSLSGGQRARVAFAQLALTKPDLLILDEPTNNLDLESIE 635
             AR+ L   G +      P    SGG R RV+ A+    +P LL+LDEPTN+LDL ++ 
Sbjct: 429 AKARRILAGLGFDPEMQNRPTQKFSGGWRMRVSLARALFMEPTLLMLDEPTNHLDLNAVI 488

Query: 636 ALCKAIEQYEGGVVVVTHDERLIRQTDCSLWVVENKNIFEIDGEFDDYRK 785
            L   ++ +   +++V+HD+  +      +  ++ + +    G +  ++K
Sbjct: 489 WLNNYLQGWRKTLLIVSHDQGFLDDVCTDIIHLDAQRLHYYRGNYMTFKK 538

>sp|Q7YR37|ABCF1_PANTR ATP-binding cassette sub-family F member 1 (ATP-binding cassette 50)
          Length = 807

 Score =  300 bits (768), Expect = 4e-81
 Identities = 153/269 (56%), Positives = 196/269 (72%)
 Frame = +3

Query: 3    AEKKQKENLSXXXXXXXXXXXXXXXXIGPTELLEKPKEYQVKFDFPNPQKLSGSILSLTN 182
            AEK+ KE L+                  P ELL++PKEY V+F FP+P  LS  +L L  
Sbjct: 533  AEKQTKEALTRKQQKCRRKNQDEESQEAP-ELLKRPKEYTVRFTFPDPPPLSPPVLGLHG 591

Query: 183  VSFAYSKTSTDLFTKVDFGVDMNSRVSIVGPNGVGKSTFLKLLTGEIEPTIGERSLNHRI 362
            V+F Y +    LF  +DFG+DM+SR+ IVGPNGVGKST L LLTG++ PT GE   NHR+
Sbjct: 592  VTFGY-EGQKPLFKNLDFGIDMDSRICIVGPNGVGKSTLLLLLTGKLTPTHGEMRKNHRL 650

Query: 363  KLGKYNQHSGDQLNMKETPVEYLRRLFNLGYQDARQNLGRFGLESHAHEIPNSSLSGGQR 542
            K+G +NQ   +QL M+ETP EYL+R FNL YQDAR+ LGRFGLESHAH I    LSGGQ+
Sbjct: 651  KIGFFNQQYAEQLRMEETPTEYLQRGFNLPYQDARKCLGRFGLESHAHTIQICKLSGGQK 710

Query: 543  ARVAFAQLALTKPDLLILDEPTNNLDLESIEALCKAIEQYEGGVVVVTHDERLIRQTDCS 722
            ARV FA+LA  +PD+LILDEPTNNLD+ESI+AL +AI +Y+G V+VV+HD RLI +T+C 
Sbjct: 711  ARVVFAELACREPDVLILDEPTNNLDIESIDALGEAINEYKGAVIVVSHDARLITETNCQ 770

Query: 723  LWVVENKNIFEIDGEFDDYRKEVLNALNE 809
            LWVVE +++ +IDG+F+DY++EVL AL E
Sbjct: 771  LWVVEEQSVSQIDGDFEDYKREVLEALGE 799


 Score = 75.1 bits (183), Expect = 3e-13
 Identities = 58/230 (25%), Positives = 99/230 (43%), Gaps = 31/230 (13%)
 Frame = +3

Query: 189 FAYSKTSTDLFTKVDFGVDMNSRVSIVGPNGVGKSTFLKLLTGE---IEPTIGE------ 341
           F+ S    +LF   D  +  + R  +VGPNG GK+T LK +      I P I        
Sbjct: 271 FSISAHGKELFVNADLYIVASRRYGLVGPNGKGKTTLLKHIANRALSIPPNIDVLLCEQE 330

Query: 342 -------------RSLNHRIKLGKYNQHSGDQLNM-KETPVEYLRRLFN--------LGY 455
                        R+   R+KL +  +    QL    +T  E L +++            
Sbjct: 331 VVADETPAVQAVLRADTKRLKLLEEERRLQGQLEQGDDTAAERLEKVYEELRATGAAAAE 390

Query: 456 QDARQNLGRFGLESHAHEIPNSSLSGGQRARVAFAQLALTKPDLLILDEPTNNLDLESIE 635
             AR+ L   G +      P    SGG R RV+ A+    +P LL+LDEPTN+LDL ++ 
Sbjct: 391 AKARRILAGLGFDPEMQNRPTQKFSGGWRMRVSLARALFMEPTLLMLDEPTNHLDLNAVI 450

Query: 636 ALCKAIEQYEGGVVVVTHDERLIRQTDCSLWVVENKNIFEIDGEFDDYRK 785
            L   ++ +   +++V+HD+  +      +  ++ + +    G +  ++K
Sbjct: 451 WLNNYLQGWRKTLLIVSHDQGFLDDVCTDIIHLDAQRLHYYRGNYMTFKK 500

>sp|P40024|YEM6_YEAST Probable ATP-dependent transporter YER036C
          Length = 610

 Score =  192 bits (489), Expect = 8e-49
 Identities = 100/225 (44%), Positives = 152/225 (67%), Gaps = 4/225 (1%)
 Frame = +3

Query: 129  FDFPNPQKLSGSILSLTNVSFAY-SKTSTDLFTKVDFGVDMNSRVSIVGPNGVGKSTFLK 305
            F FP  ++L   +L+  ++SF Y S  S +L+  ++FGVDM+SR+++VGPNGVGKST LK
Sbjct: 380  FRFPQVERLPPPVLAFDDISFHYESNPSENLYEHLNFGVDMDSRIALVGPNGVGKSTLLK 439

Query: 306  LLTGEIEPTIGERSLNHRIKLGKYNQHSGDQLNMKETPVEYLRRLFNLGYQDA---RQNL 476
            ++TGE+ P  G  S +  +KLG Y+QHS DQL++ ++ +E++R  ++   QD    R  L
Sbjct: 440  IMTGELTPQSGRVSRHTHVKLGVYSQHSQDQLDLTKSALEFVRDKYSNISQDFQFWRGQL 499

Query: 477  GRFGLESHAHEIPNSSLSGGQRARVAFAQLALTKPDLLILDEPTNNLDLESIEALCKAIE 656
            GR+GL      +  ++LS GQR+RV FA LAL +P++L+LDEPTN LD+ +I++L  AI 
Sbjct: 500  GRYGLTGEGQTVQMATLSEGQRSRVVFALLALEQPNVLLLDEPTNGLDIPTIDSLADAIN 559

Query: 657  QYEGGVVVVTHDERLIRQTDCSLWVVENKNIFEIDGEFDDYRKEV 791
            ++ GGVVVV+HD RL+ +    ++VVENK     DG    Y+ ++
Sbjct: 560  EFNGGVVVVSHDFRLLDKIAQDIFVVENKTATRWDGSILQYKNKL 604


 Score = 60.8 bits (146), Expect = 5e-09
 Identities = 63/247 (25%), Positives = 106/247 (42%), Gaps = 41/247 (16%)
 Frame = +3

Query: 231 DFGVDMN--SRVSIVGPNGVGKSTFLK----------------LLTGEIEPT------IG 338
           D G+++N   R  ++G NG GKSTFLK                LL    EP+        
Sbjct: 99  DSGLELNYGRRYGLLGENGCGKSTFLKALATREYPIPEHIDIYLLDEPAEPSELSALDYV 158

Query: 339 ERSLNHRIK-----LGKYNQHSGDQLNMKETPVEYLRRLFNLGYQDARQNLGRFGLESHA 503
                H +K     + K     G +  + E   E +  L    ++ +R  +   GL  + 
Sbjct: 159 VTEAQHELKRIEDLVEKTILEDGPESELLEPLYERMDSLDPDTFE-SRAAIILIGLGFNK 217

Query: 504 HEI--PNSSLSGGQRARVAFAQLALTKPDLLILDEPTNNLDLESIEALCKAIEQYEGGVV 677
             I      +SGG + RVA A+    KP LL+LD+PT +LDLE+   L + +++++  +V
Sbjct: 218 KTILKKTKDMSGGWKMRVALAKALFVKPTLLLLDDPTAHLDLEACVWLEEYLKRFDRTLV 277

Query: 678 VVTHDERLIRQTDCSLWVVENKNIFEIDGEFDDYRK----------EVLNALNEEISNPS 827
           +V+H +  +     ++  +  + +    G +D Y K          +  N   EEI +  
Sbjct: 278 LVSHSQDFLNGVCTNMIDMRAQKLTAYGGNYDSYHKTRSELETNQMKQYNKQQEEIQHIK 337

Query: 828 AVAAAAG 848
              A+AG
Sbjct: 338 KFIASAG 344

>sp|Q9UG63|ABCF2_HUMAN ATP-binding cassette sub-family F member 2 (Iron-inhibited ABC
            transporter 2)
          Length = 623

 Score =  186 bits (472), Expect = 8e-47
 Identities = 93/232 (40%), Positives = 151/232 (65%), Gaps = 2/232 (0%)
 Frame = +3

Query: 123  VKFDFPNPQKLSGSILSLTNVSFAYSKTSTDLFTKVDFGVDMNSRVSIVGPNGVGKSTFL 302
            + F FP   K+   ++ + NVSF Y+K    ++  ++FG+D+++RV++VGPNG GKST L
Sbjct: 381  LSFYFPPCGKIPPPVIMVQNVSFKYTKDGPCIYNNLEFGIDLDTRVALVGPNGAGKSTLL 440

Query: 303  KLLTGEIEPTIGERSLNHRIKLGKYNQHSGDQLNMKETPVEYLRRLFN--LGYQDARQNL 476
            KLLTGE+ PT G    +  +K+G+Y+QH  +QL++  +P+EY+ + +      ++ R+ +
Sbjct: 441  KLLTGELLPTDGMIRKHSHVKIGRYHQHLQEQLDLDLSPLEYMMKCYPEIKEKEEMRKII 500

Query: 477  GRFGLESHAHEIPNSSLSGGQRARVAFAQLALTKPDLLILDEPTNNLDLESIEALCKAIE 656
            GR+GL       P  +LS GQ+ RV  A LA   P +L LDEPTN+LD+E+I+AL  AI 
Sbjct: 501  GRYGLTGKQQVSPIRNLSDGQKCRVCLAWLAWQNPHMLFLDEPTNHLDIETIDALADAIN 560

Query: 657  QYEGGVVVVTHDERLIRQTDCSLWVVENKNIFEIDGEFDDYRKEVLNALNEE 812
            ++EGG+++V+HD RLI+Q    +WV E + I +  G+   Y++ + + L +E
Sbjct: 561  EFEGGMMLVSHDFRLIQQVAQEIWVCEKQTITKWPGDILAYKEHLKSKLVDE 612


 Score = 60.5 bits (145), Expect = 7e-09
 Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 30/215 (13%)
 Frame = +3

Query: 231 DFGVDMNS--RVSIVGPNGVGKSTFLKL----------------LTGEIEPTIGERSLNH 356
           D  +++NS  R  ++G NG+GKS  L                  LT E+ P+  +++  H
Sbjct: 103 DTKLELNSGRRYGLIGLNGIGKSMLLSAIGKREVPIPEHIDIYHLTREMPPS--DKTPLH 160

Query: 357 --------RIKLGKYNQHSGDQLNMKETPVEYLRRLFNLGYQDARQNLGRF----GLESH 500
                   R  L K  +    +    E  +E   RL  L    A     R     G    
Sbjct: 161 CVMEVDTERAMLEKEAERLAHEDAECEKLMELYERLEELDADKAEMRASRILHGLGFTPA 220

Query: 501 AHEIPNSSLSGGQRARVAFAQLALTKPDLLILDEPTNNLDLESIEALCKAIEQYEGGVVV 680
                    SGG R RVA A+    +P +L+LDEPTN+LDL++   L + ++ ++  +V+
Sbjct: 221 MQRKKLKDFSGGWRMRVALARALFIRPFMLLLDEPTNHLDLDACVWLEEELKTFKRILVL 280

Query: 681 VTHDERLIRQTDCSLWVVENKNIFEIDGEFDDYRK 785
           V+H +  +     ++  + NK +    G +D Y K
Sbjct: 281 VSHSQDFLNGVCTNIIHMHNKKLKYYTGNYDQYVK 315

>sp|Q99LE6|ABCF2_MOUSE ATP-binding cassette sub-family F member 2
          Length = 628

 Score =  186 bits (472), Expect = 8e-47
 Identities = 93/232 (40%), Positives = 151/232 (65%), Gaps = 2/232 (0%)
 Frame = +3

Query: 123  VKFDFPNPQKLSGSILSLTNVSFAYSKTSTDLFTKVDFGVDMNSRVSIVGPNGVGKSTFL 302
            + F FP   K+   ++ + NVSF Y+K    ++  ++FG+D+++RV++VGPNG GKST L
Sbjct: 386  LSFYFPPCGKIPPPVIMVQNVSFKYTKDGPCIYNNLEFGIDLDTRVALVGPNGAGKSTLL 445

Query: 303  KLLTGEIEPTIGERSLNHRIKLGKYNQHSGDQLNMKETPVEYLRRLFN--LGYQDARQNL 476
            KLLTGE+ PT G    +  +K+G+Y+QH  +QL++  +P+EY+ + +      ++ R+ +
Sbjct: 446  KLLTGELLPTDGMIRKHSHVKIGRYHQHLQEQLDLDLSPLEYMMKCYPEIKEKEEMRKII 505

Query: 477  GRFGLESHAHEIPNSSLSGGQRARVAFAQLALTKPDLLILDEPTNNLDLESIEALCKAIE 656
            GR+GL       P  +LS GQ+ RV  A LA   P +L LDEPTN+LD+E+I+AL  AI 
Sbjct: 506  GRYGLTGKQQVSPIRNLSDGQKCRVCLAWLAWQNPHMLFLDEPTNHLDIETIDALADAIN 565

Query: 657  QYEGGVVVVTHDERLIRQTDCSLWVVENKNIFEIDGEFDDYRKEVLNALNEE 812
            ++EGG+++V+HD RLI+Q    +WV E + I +  G+   Y++ + + L +E
Sbjct: 566  EFEGGMMLVSHDFRLIQQVAQEIWVCEKQTITKWPGDILAYKEHLKSKLVDE 617


 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 28/213 (13%)
 Frame = +3

Query: 231 DFGVDMNS--RVSIVGPNGVGKSTFLKLLTGEIEPTIGERSLNHRIKLGKYNQHSGDQLN 404
           D  +++NS  R  ++G NG+GKS  L  +     P      + H  +    ++ +  Q  
Sbjct: 108 DTKLELNSGRRYGLIGLNGIGKSMLLSAIGKREVPIPEHIDIYHLTREMPPSEKTPLQCV 167

Query: 405 MK----------------------ETPVEYLRRLFNLGYQDARQNLGRF----GLESHAH 506
           M+                      E  +E   RL  L    A     R     G      
Sbjct: 168 MEVDTERAMLEREAERLAHEDAECEKLMELYERLEELDADKAEMRASRILHGLGFTPAMQ 227

Query: 507 EIPNSSLSGGQRARVAFAQLALTKPDLLILDEPTNNLDLESIEALCKAIEQYEGGVVVVT 686
                  SGG R RVA A+    +P +L+LDEPTN+LDL++   L + ++ ++  +V+V+
Sbjct: 228 RKKLKDFSGGWRMRVALARALFIRPFMLLLDEPTNHLDLDACVWLEEELKTFKRILVLVS 287

Query: 687 HDERLIRQTDCSLWVVENKNIFEIDGEFDDYRK 785
           H +  +     ++  + NK +    G +D Y K
Sbjct: 288 HSQDFLNGVCTNIIHMHNKKLKYYTGNYDQYVK 320

>sp|P43535|GCN20_YEAST Protein GCN20
          Length = 752

 Score =  157 bits (398), Expect = 3e-38
 Identities = 85/237 (35%), Positives = 142/237 (59%), Gaps = 2/237 (0%)
 Frame = +3

Query: 96   LLEKPKEYQ-VKFDFPNPQKLSGSILSLTNVSFAYSKTSTDLFTKVDFGVDMNSRVSIVG 272
            +LE P++ + + F FP   KLS  I+ L +VSF Y + +  L   V+  V M+SR+++VG
Sbjct: 507  VLEPPEQDKTIDFKFPECDKLSPPIIQLQDVSFGYDENNL-LLKDVNLDVQMDSRIALVG 565

Query: 273  PNGVGKSTFLKLLTGEIEPTIGERSLNHRIKLGKYNQHSGDQLNMKETPVEYLRRLF-NL 449
             NG GK+T LK++  ++ P  G  S N R+++G + QH  D +++  + V+++ + F   
Sbjct: 566  ANGCGKTTLLKIMMEQLRPLKGFVSRNPRLRIGYFTQHHVDSMDLTTSAVDWMSKSFPGK 625

Query: 450  GYQDARQNLGRFGLESHAHEIPNSSLSGGQRARVAFAQLALTKPDLLILDEPTNNLDLES 629
              ++ R++LG FG+           LSGGQ++RVAFA L L  P +L+LDEP+N+LD   
Sbjct: 626  TDEEYRRHLGSFGITGTLGLQKMQLLSGGQKSRVAFAALCLNNPHILVLDEPSNHLDTTG 685

Query: 630  IEALCKAIEQYEGGVVVVTHDERLIRQTDCSLWVVENKNIFEIDGEFDDYRKEVLNA 800
            ++AL +A++ + GGV++V+HD  +I      +WV E   +   +G   DYR  +L +
Sbjct: 686  LDALVEALKNFNGGVLMVSHDISVIDSVCKEIWVSEQGTVKRFEGTIYDYRDYILQS 742


 Score = 64.3 bits (155), Expect = 5e-10
 Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
 Frame = +3

Query: 486 GLESHAHEIPNSSLSGGQRARVAFAQLALTKPDLLILDEPTNNLDLESIEALCKAIEQYE 665
           G  + A + P +S SGG R R++ A+    +PDLL+LDEP+N LD+ SI  L + ++ Y 
Sbjct: 355 GFSTEAQQQPTNSFSGGWRMRLSLARALFCQPDLLLLDEPSNMLDVPSIAYLAEYLKTYP 414

Query: 666 GGVVVVTHDERLIRQTDCSLWVVENKNIFEIDG-EFDDY 779
             V+ V+HD   + +    +    N+ +    G +FD +
Sbjct: 415 NTVLTVSHDRAFLNEVATDIIYQHNERLDYYRGQDFDTF 453

>sp|P63390|YHES_ECO57 Hypothetical ABC transporter ATP-binding protein yheS
 sp|P63389|YHES_ECOLI Hypothetical ABC transporter ATP-binding protein yheS
          Length = 637

 Score =  151 bits (382), Expect = 2e-36
 Identities = 82/230 (35%), Positives = 130/230 (56%), Gaps = 1/230 (0%)
 Frame = +3

Query: 126 KFDFPNPQKLSGSILSLTNVSFAYSKTSTDLFTKVDFGVDMNSRVSIVGPNGVGKSTFLK 305
           +F F  P+ L   +L +  VS  Y      +   +   +   SR+ ++G NG GKST +K
Sbjct: 299 RFSFRAPESLPNPLLKMEKVSAGYGDRI--ILDSIKLNLVPGSRIGLLGRNGAGKSTLIK 356

Query: 306 LLTGEIEPTIGERSLNHRIKLGKYNQHSGDQLNMKETPVEYLRRLFNLGY-QDARQNLGR 482
           LL GE+ P  GE  L   IKLG + QH  + L   E+P+++L RL      Q  R  LG 
Sbjct: 357 LLAGELAPVSGEIGLAKGIKLGYFAQHQLEYLRADESPIQHLARLAPQELEQKLRDYLGG 416

Query: 483 FGLESHAHEIPNSSLSGGQRARVAFAQLALTKPDLLILDEPTNNLDLESIEALCKAIEQY 662
           FG +           SGG++AR+  A +   +P+LL+LDEPTN+LDL+  +AL +A+ ++
Sbjct: 417 FGFQGDKVTEETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIEF 476

Query: 663 EGGVVVVTHDERLIRQTDCSLWVVENKNIFEIDGEFDDYRKEVLNALNEE 812
           EG +VVV+HD  L+R T   L++V ++ +   DG+ +DY++ + +   +E
Sbjct: 477 EGALVVVSHDRHLLRSTTDDLYLVHDRKVEPFDGDLEDYQQWLSDVQKQE 526


 Score = 78.6 bits (192), Expect = 2e-14
 Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 34/225 (15%)
 Frame = +3

Query: 240 VDMNSRVSIVGPNGVGKSTFLKLLTGEIEPTIGERSLNHRIKLGKYNQHSGDQLNMKETP 419
           ++   +V +VG NG GKST L LL  EI    G  +     +L   NQ +     + +  
Sbjct: 24  INPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTFPGSWQLAWVNQETPA---LPQAA 80

Query: 420 VEYL------RRLFNLGYQDARQN----------------------------LGRFGLES 497
           +EY+       R       DA +                             L   G  +
Sbjct: 81  LEYVIDGDREYRQLEAQLHDANERNDGHAIATIHGKLDAIDAWSIRSRAASLLHGLGFSN 140

Query: 498 HAHEIPNSSLSGGQRARVAFAQLALTKPDLLILDEPTNNLDLESIEALCKAIEQYEGGVV 677
              E P S  SGG R R+  AQ  + + DLL+LDEPTN+LDL+++  L K ++ Y+G ++
Sbjct: 141 EQLERPVSDFSGGWRMRLNLAQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYQGTLI 200

Query: 678 VVTHDERLIRQTDCSLWVVENKNIFEIDGEFDDYRKEVLNALNEE 812
           +++HD   +      +  +E +++FE  G +  +  +    L ++
Sbjct: 201 LISHDRDFLDPIVDKIIHIEQQSMFEYTGNYSSFEVQRATRLAQQ 245

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,679,725
Number of Sequences: 369166
Number of extensions: 1950833
Number of successful extensions: 10775
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10205
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9318621220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00752

Planaria EST Database

DrC_00752

BLASTX 2.2.13 [Nov-27-2005]

Cluster detail