Planaria EST Database


DrC_00743

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00743
         (599 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q15185|TEBP_HUMAN  Telomerase-binding protein p23 (Hsp90 ...    88   1e-17
sp|Q9R0Q7|TEBP_MOUSE  Telomerase-binding protein p23 (Hsp90 ...    88   2e-17
sp|Q90955|TEBP_CHICK  Telomerase-binding protein p23 (Hsp90 ...    78   2e-14
sp|Q23280|YOCA_CAEEL  Hypothetical protein ZC395.10 in chrom...    75   2e-13
sp|Q9VH95|YC17_DROME  Hypothetical protein CG16817                 67   3e-11
sp|Q11118|WOS2_SCHPO  Protein wos2 (p21)                           65   1e-10
sp|Q6ID70|Y3377_ARATH  Protein At3g03773                           61   2e-09
sp|P28707|SBA1_YEAST  Co-chaperone protein SBA1                    49   1e-05
sp|O48850|VA725_ARATH  Vesicle-associated membrane protein 7...    35   0.14 
sp|Q01053|VG58_SHV21  Gene 58 protein                              31   2.1  
>sp|Q15185|TEBP_HUMAN Telomerase-binding protein p23 (Hsp90 co-chaperone) (Progesterone
           receptor complex p23)
          Length = 160

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 50/155 (32%), Positives = 80/155 (51%), Gaps = 2/155 (1%)
 Frame = +3

Query: 54  WAQRKDYLYITICIGDIKDKNMSIKEDSFSFNGISGVPPKPYAVKLDFHSKVHTDDYKQI 233
           W  R+DY++I  C+ D KD N++ ++   +F+ + G     +  ++D    +  +D K  
Sbjct: 8   WYDRRDYVFIEFCVEDSKDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCIDPNDSKHK 67

Query: 234 STDREIVLLIKKSTSG-FWPSLITKRGPKPHWLKTDFNRWKXXXXXXXXXXXXXXXXXXQ 410
            TDR I+  ++K  SG  WP L TK   K +WL  DFN WK                  +
Sbjct: 68  RTDRSILCCLRKGESGQSWPRL-TKERAKLNWLSVDFNNWK-DWEDDSDEDMSNFDRFSE 125

Query: 411 MMSQMGEFNDAG-KDAEVAEEDTVDSDDEELPDLK 512
           MM+ MG   D    + + A++D+ DSDDE++PDL+
Sbjct: 126 MMNNMGGDEDVDLPEVDGADDDSQDSDDEKMPDLE 160
>sp|Q9R0Q7|TEBP_MOUSE Telomerase-binding protein p23 (Hsp90 co-chaperone) (Progesterone
           receptor complex p23) (Sid 3177)
          Length = 160

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 50/155 (32%), Positives = 79/155 (50%), Gaps = 2/155 (1%)
 Frame = +3

Query: 54  WAQRKDYLYITICIGDIKDKNMSIKEDSFSFNGISGVPPKPYAVKLDFHSKVHTDDYKQI 233
           W  R+DY++I  C+ D KD N++ ++   +F+ + G     +  ++D    +  +D K  
Sbjct: 8   WYDRRDYVFIEFCVEDSKDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCIDPNDSKHK 67

Query: 234 STDREIVLLIKKSTSG-FWPSLITKRGPKPHWLKTDFNRWKXXXXXXXXXXXXXXXXXXQ 410
            TDR I+  ++K  SG  WP L TK   K +WL  DFN WK                  +
Sbjct: 68  RTDRSILCCLRKGESGQSWPRL-TKERAKLNWLSVDFNNWK-DWEDDSDEDMSNFDRFSE 125

Query: 411 MMSQMGEFNDAG-KDAEVAEEDTVDSDDEELPDLK 512
           MM  MG   D    + + A++D+ DSDDE++PDL+
Sbjct: 126 MMDHMGGDEDVDLPEVDGADDDSQDSDDEKMPDLE 160
>sp|Q90955|TEBP_CHICK Telomerase-binding protein p23 (Hsp90 co-chaperone) (Progesterone
           receptor complex p23)
          Length = 146

 Score = 77.8 bits (190), Expect = 2e-14
 Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 2/148 (1%)
 Frame = +3

Query: 75  LYITICIGDIKDKNMSIKEDSFSFNGISGVPPKPYAVKLDFHSKVHTDDYKQISTDREIV 254
           ++I  C+ D KD N++ ++   +F+ + G     +  ++D  + +  ++ K   TDR I+
Sbjct: 1   VFIEFCVEDSKDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFNNIDPNESKHKRTDRSIL 60

Query: 255 LLIKKSTSG-FWPSLITKRGPKPHWLKTDFNRWKXXXXXXXXXXXXXXXXXXQMMSQMGE 431
             ++K  SG  WP L TK   K +WL  DFN WK                  +MM+ MG 
Sbjct: 61  CCLRKGESGQAWPRL-TKERAKLNWLSVDFNNWK-DWEDDSDEDMSNFDRFSEMMNNMGG 118

Query: 432 FNDAG-KDAEVAEEDTVDSDDEELPDLK 512
            +D    + + A++D+ DSDDE++PDL+
Sbjct: 119 DDDVDLPEVDGADDDSPDSDDEKMPDLE 146
>sp|Q23280|YOCA_CAEEL Hypothetical protein ZC395.10 in chromosome III
          Length = 175

 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 9/167 (5%)
 Frame = +3

Query: 42  PTVLWAQRKDYLYITICIGDIKDKNMSIKEDSFSFNGISGVPPKPYAVKLDFHSKVHTDD 221
           PTVLWAQR+  +Y+TI + + K + +  + +   F G S      Y   L+F  ++    
Sbjct: 5   PTVLWAQRESLVYLTIEVDEAKIEELKGEGNKLHFQGSSKTDK--YEATLEFFDEIDPAS 62

Query: 222 YKQI-STDREIVLLIKKSTSGFWPSLITKRGPKPHWLKTDFNRWK--------XXXXXXX 374
            K   S+ R + + ++K T  +WP L+  +G K HWLK DF +WK               
Sbjct: 63  VKHTGSSTRVVEITVQKKTPAWWPRLLQNKG-KVHWLKVDFGKWKDEDEDDEAEDAGAGI 121

Query: 375 XXXXXXXXXXXQMMSQMGEFNDAGKDAEVAEEDTVDSDDEELPDLKE 515
                      Q MSQMG     G D    E+   D +D+++PDL++
Sbjct: 122 GGGMANGFDLNQYMSQMG--GAGGADFGGLED---DEEDDDMPDLED 163
>sp|Q9VH95|YC17_DROME Hypothetical protein CG16817
          Length = 184

 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 2/163 (1%)
 Frame = +3

Query: 33  ILHPTVLWAQRKDYLYITICIGDIKDKNMSIKEDSFSFNGISGVPP-KPYAVKLDFHSKV 209
           ++ P V WAQR D +Y+ I + + KD    + E +F+F G++ + P K Y V L+F  +V
Sbjct: 7   LIPPPVSWAQRNDLIYVIIDV-ECKDIEHKVTEKTFTFKGVNVLDPSKKYEVTLNFLHEV 65

Query: 210 HTDDYKQISTDREIVLLIKKSTSG-FWPSLITKRGPKPHWLKTDFNRWKXXXXXXXXXXX 386
             +     +  R +   I K  +G +W SL T +  K H+LK +F +W+           
Sbjct: 66  DPEKVTSKNIGRCLEFTIPKKAAGPYWSSLTTDK-TKLHFLKANFAKWRDESDDEEGDQK 124

Query: 387 XXXXXXXQMMSQMGEFNDAGKDAEVAEEDTVDSDDEELPDLKE 515
                   + S  G++N+   D  V +E+  +  D+ +P L +
Sbjct: 125 DNSMFGNFLNSPGGDWNNKFDDFNVDDEE--EDSDDNIPSLSQ 165
>sp|Q11118|WOS2_SCHPO Protein wos2 (p21)
          Length = 186

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
 Frame = +3

Query: 42  PTVLWAQR-------KDYLYITICIGDIKDKNMSIKEDSFSFNGISGVPPKPYAVKLDFH 200
           P VLWAQR       K+ +Y+T+ I D  D  +++  +    +  SG     YAV++DF 
Sbjct: 8   PEVLWAQRSNKDDAEKNVIYLTVLIPDAVDPKINLTPEKLVIDSKSGANAH-YAVQIDFF 66

Query: 201 SKVHTDDYKQISTDREI--VLLIKKSTSGFWPSLITKRGPKPHWLKTDFNRW 350
             +  +  K   T R I  VL  K+    FWP L TK   + HWL+TDF+RW
Sbjct: 67  KDIDVEKSKYSVTGRYIFFVLYKKELQEEFWPRL-TKEKLRLHWLRTDFDRW 117
>sp|Q6ID70|Y3377_ARATH Protein At3g03773
          Length = 150

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
 Frame = +3

Query: 39  HPTVLWAQRKDYLYITICIGDIKDKNMSIK-EDSFSFNGISGVPPKPYAVKLDFHSKVHT 215
           +P VLWAQR D +Y+T+ + D KD ++  + +  FSF+ + G   + +   L+ + K+ T
Sbjct: 4   NPEVLWAQRSDKVYLTVALPDAKDISVKCEPQGLFSFSAL-GAQGERFEFSLELYGKIMT 62

Query: 216 DDYKQISTDREIVLLIKKSTSGFWPSLITKRGPKPHWLKTDFNRW 350
           +  K +   R I+  I+K    +W  L+        ++K D+N+W
Sbjct: 63  EYRKNVGL-RNIIFSIQKEERSWWTRLLKSEEKPAPYIKVDWNKW 106
>sp|P28707|SBA1_YEAST Co-chaperone protein SBA1
          Length = 216

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 19/126 (15%)
 Frame = +3

Query: 30  EILHPTVLWAQR-------KDYLYITICIGDIKDKNMSIKEDSFSFNGISGVPPKPYAVK 188
           ++++P V WAQR       ++Y+ IT+ I D     ++IK         S    KP+   
Sbjct: 4   KVINPQVAWAQRSSTTDPERNYVLITVSIADCDAPELTIKPSYIELKAQS----KPHVGD 59

Query: 189 LDFHS-KVHTDDYKQISTDREI----------VLLIKKST-SGFWPSLITKRGPKPHWLK 332
            + H  ++H D YK+I  ++ +          + L KK   S +WP L TK   K  ++K
Sbjct: 60  ENVHHYQLHIDLYKEIIPEKTMHKVANGQHYFLKLYKKDLESEYWPRL-TKEKVKYPYIK 118

Query: 333 TDFNRW 350
           TDF++W
Sbjct: 119 TDFDKW 124
>sp|O48850|VA725_ARATH Vesicle-associated membrane protein 725 (AtVAMP725)
          Length = 285

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 17/40 (42%), Positives = 24/40 (60%)
 Frame = -1

Query: 182 SIGLWWNSRNAIK*KGIFFNTHVFILNITNTYGDIQIIFS 63
           S+ LWWNS+N I+    FF    F+L +T T G   +I+S
Sbjct: 39  SLSLWWNSKNRIRGCVWFF----FLLRVTRTMGQQNLIYS 74
>sp|Q01053|VG58_SHV21 Gene 58 protein
          Length = 357

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
 Frame = +1

Query: 16  LVIMLKFYTLLYCGLREKIICISPYVLVILRIKT*VLKKIPFHLM------AFLEFHQSP 177
           +V +  F T  Y  L      +  YV+V  R+   V+   PF L       A   FH+ P
Sbjct: 125 IVYLCPFITYKYYELGFLNAMLLYYVMVANRMYLSVIFMCPFVLFLGMGVFALKNFHEHP 184

Query: 178 MLSNLISTAKFILMIINKFQRIG 246
           +  N++ T K I    NK++  G
Sbjct: 185 VFENILITCKPIFTAKNKYKTKG 207
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,310,353
Number of Sequences: 369166
Number of extensions: 1047748
Number of successful extensions: 2569
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2549
length of database: 68,354,980
effective HSP length: 105
effective length of database: 48,957,805
effective search space used: 4602033670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00743

  1. Dr_sW_028_O10
  2. Dr_sW_019_F24
  3. Dr_sW_023_J17
  4. Dr_sW_022_I07
  5. Dr_sW_018_B10
  6. Dr_sW_019_L16