Planaria EST Database

DrC_00738

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00738
         (952 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8SUH6|ZA15_ENCCU  Zinc finger C2H2 protein ECU10_0150          44   9e-04
sp|O95625|ZBT11_HUMAN  Zinc finger and BTB domain containing...    39   0.022
sp|Q01954|BNC1_HUMAN  Zinc finger protein basonuclin-1             35   0.24 
sp|Q60436|ARS2_CRIGR  Arsenite-resistance protein 2                35   0.24 
sp|Q9HAZ2|PRD16_HUMAN  PR-domain zinc finger protein 16 (Tra...    35   0.31 
sp|Q8N895|ZN366_HUMAN  Zinc finger protein 366                     35   0.41 
sp|P04133|HEX_ADE05  Hexon protein (Late protein 2)                34   0.53 
sp|Q9CR24|NUDT8_MOUSE  Nucleoside diphosphate-linked moiety ...    34   0.53 
sp|Q9NTW7|ZF64B_HUMAN  Zinc finger protein 64, isoforms 3 an...    34   0.69 
sp|Q92206|ERG1_CANAL  Squalene monooxygenase (Squalene epoxi...    34   0.69 

>sp|Q8SUH6|ZA15_ENCCU Zinc finger C2H2 protein ECU10_0150
          Length = 388

 Score = 43.5 bits (101), Expect = 9e-04
 Identities = 16/39 (41%), Positives = 26/39 (66%)
 Frame = +1

Query: 301 SEENWKCEFCGKEFYSESSIWRHVDNKHHDQLNKAENHV 417
           +E ++KC FCGK F SE  I+ H +NKH +++ + E  +
Sbjct: 295 NENHYKCGFCGKAFESEKFIFNHFNNKHENEIRRIEKGI 333

>sp|O95625|ZBT11_HUMAN Zinc finger and BTB domain containing protein 11
          Length = 1053

 Score = 38.9 bits (89), Expect = 0.022
 Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +1

Query: 280 YSMIKKYS-EENWKCEFCGKEFYSESSIWRHVDNKHHDQLNKAENHV 417
           YS +K +S  E ++C  CGKEFY ++   RHV    H +  +A+ ++
Sbjct: 810 YSHVKSHSVTEPYRCNICGKEFYEKALFRRHVKKATHGKKGRAKQNL 856

>sp|Q01954|BNC1_HUMAN Zinc finger protein basonuclin-1
          Length = 994

 Score = 35.4 bits (80), Expect = 0.24
 Identities = 19/90 (21%), Positives = 40/90 (44%)
 Frame = +1

Query: 166 DIVHKFLRDRILPAYDKMGLVIPKDCLWNTERDVFGRQYSMIKKYSEENWKCEFCGKEFY 345
           ++  + L   +  A    G+  P  CL +++      Q+++ ++  E  ++C+ C K F 
Sbjct: 673 ELQQRLLAGGLFSALSNRGMAFP--CLEDSKELEHVGQHALARQIEENRFQCDICKKTFK 730

Query: 346 SESSIWRHVDNKHHDQLNKAENHVCLGDFC 435
           +  S+       HH  ++  E H C  + C
Sbjct: 731 NACSV-----KIHHKNMHVKEMHTCTVEGC 755

>sp|Q60436|ARS2_CRIGR Arsenite-resistance protein 2
          Length = 290

 Score = 35.4 bits (80), Expect = 0.24
 Identities = 15/62 (24%), Positives = 32/62 (51%)
 Frame = +1

Query: 232 PKDCLWNTERDVFGRQYSMIKKYSEENWKCEFCGKEFYSESSIWRHVDNKHHDQLNKAEN 411
           P+  +  TE++V     S  ++  ++ W C   GK+F     + +H+ NKH +++ + + 
Sbjct: 115 PRRWVVKTEQEVEKFVTSNTQELGKDKWLCPLSGKKFKGPEFVRKHIFNKHAEKIEEVKK 174

Query: 412 HV 417
            V
Sbjct: 175 EV 176

>sp|Q9HAZ2|PRD16_HUMAN PR-domain zinc finger protein 16 (Transcription factor MEL1)
          Length = 1276

 Score = 35.0 bits (79), Expect = 0.31
 Identities = 29/133 (21%), Positives = 61/133 (45%), Gaps = 10/133 (7%)
 Frame = +1

Query: 304  EENWKCEFCGKEFYSESSIWRHVDNKHHDQLNKAENHVCLGDFCQLFRCEILSNRYNKPT 483
            E+ ++C++C + F   S++ RHV N H+ +              + F+C + +  + +  
Sbjct: 976  EQPYRCKYCDRSFSISSNLQRHVRNIHNKE--------------KPFKCHLCNRCFGQ-- 1019

Query: 484  QTNWAKKLCNHNDMNQLKIQCNNIVDNCL-------TNQMANVNVL---RDYLYSTVCDF 633
            QTN  + L  H   N    Q   ++ N L       T++  N  +L    D  +S + +F
Sbjct: 1020 QTNLDRHLKKHEHENAPVSQHPGVLTNHLGTSASSPTSESDNHALLDEKEDSYFSEIRNF 1079

Query: 634  LSCEKYWQSSSKS 672
            ++  +  Q+S+++
Sbjct: 1080 IANSEMNQASTRT 1092

>sp|Q8N895|ZN366_HUMAN Zinc finger protein 366
          Length = 744

 Score = 34.7 bits (78), Expect = 0.41
 Identities = 33/146 (22%), Positives = 60/146 (41%), Gaps = 4/146 (2%)
 Frame = +1

Query: 145 NCSRSDSDIVHKFLRDRILPAYDKMGLVIPKDCLWNTERDVFGRQYSMIKKYSEENWKCE 324
           NCS  D    +       +  +  +   I  +C     +    +Q+S+  K  +E+ KC 
Sbjct: 394 NCSECDKTFQYPSQLQNHMMKHKDIRPYICSECGMEFVQPHHLKQHSLTHKGVKEH-KCG 452

Query: 325 FCGKEFYSESSIWRHVDNKHHDQLNKAENHVCLGDFC--QLFRCEILSNRYNKPTQTNWA 498
            CG+EF   +++ RHV    H  +   + H+C   F   Q  +  ++ +   KP +    
Sbjct: 453 ICGREFTLLANMKRHV--LIHTNIRAYQCHLCYKSFVQKQTLKAHMIVHSDVKPFKCKLC 510

Query: 499 KKLCN--HNDMNQLKIQCNNIVDNCL 570
            K  N  HN M  + +  ++    CL
Sbjct: 511 GKEFNRMHNLMGHMHLHSDSKPFKCL 536

>sp|P04133|HEX_ADE05 Hexon protein (Late protein 2)
          Length = 952

 Score = 34.3 bits (77), Expect = 0.53
 Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 12/173 (6%)
 Frame = +1

Query: 355 SIWRHVDNKHHDQLNKAENHVC---LGDFC----QLFRCEILSNRYNKPTQTN-WAKKLC 510
           S+W    + +   +   ENH     L ++C     +   E L+    K  Q N W K   
Sbjct: 385 SMWNQAVDSYDPDVRIIENHGTEDELPNYCFPLGGVINTETLTKVKPKTGQENGWEKDAT 444

Query: 511 NHNDMNQLKIQCNNIVDNCLTNQMANVNVLRDYLYSTVCDFLSCE-KYWQSSSK-STNWV 684
             +D N++++  N  ++  L     N N+ R++LYS +  +L  + KY  S+ K S N  
Sbjct: 445 EFSDKNEIRVGNNFAMEINL-----NANLWRNFLYSNIALYLPDKLKYSPSNVKISDNPN 499

Query: 685 LNIYIAMAVFIIGLIFYYMALFVR--LNNADSIHFNERSELSHECNRHGINYR 837
              Y+   V   GL+  Y+ L  R  L+  D++     +  +H  N  G+ YR
Sbjct: 500 TYDYMNKRVVAPGLVDCYINLGARWSLDYMDNV-----NPFNHHRNA-GLRYR 546

>sp|Q9CR24|NUDT8_MOUSE Nucleoside diphosphate-linked moiety X motif 8, mitochondrial
           precursor (Nudix motif 8)
          Length = 210

 Score = 34.3 bits (77), Expect = 0.53
 Identities = 15/54 (27%), Positives = 29/54 (53%)
 Frame = +1

Query: 130 AFGETNCSRSDSDIVHKFLRDRILPAYDKMGLVIPKDCLWNTERDVFGRQYSMI 291
           +F    C   D D++H  LR+      +++GL +PK+ +W   + V+ R+ + I
Sbjct: 65  SFPGGKCDPDDQDVIHTALRE----TQEELGLEVPKEHVWGVLQPVYDREKATI 114

>sp|Q9NTW7|ZF64B_HUMAN Zinc finger protein 64, isoforms 3 and 4 (Zinc finger protein 338)
          Length = 645

 Score = 33.9 bits (76), Expect = 0.69
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +1

Query: 313 WKCEFCGKEFYSESSIWRHVDNKHHDQLNKAENHVCLG 426
           +KC+FC  +    SS+ +HVD  H D+  K EN   LG
Sbjct: 523 FKCDFCSFDTKRPSSLAKHVDKVHRDEA-KTENRAPLG 559

>sp|Q92206|ERG1_CANAL Squalene monooxygenase (Squalene epoxidase) (SE)
          Length = 496

 Score = 33.9 bits (76), Expect = 0.69
 Identities = 19/52 (36%), Positives = 26/52 (50%)
 Frame = +1

Query: 163 SDIVHKFLRDRILPAYDKMGLVIPKDCLWNTERDVFGRQYSMIKKYSEENWK 318
           +D V+K+LRD ILPA  K  +   K+ L   +  +   QY    K   EN K
Sbjct: 274 NDAVYKYLRDNILPAIPKETVPAFKEALEERKFRIMPNQYLSAMKQGSENHK 325

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,096,101
Number of Sequences: 369166
Number of extensions: 2120152
Number of successful extensions: 8316
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8232
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9895030780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00738

  1. Dr_sW_019_E02
  2. Dr_sW_005_G14