Planaria EST Database

DrC_00716

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00716
         (865 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P15178|SYD_RAT  Aspartyl-tRNA synthetase (Aspartate--tRNA...   333   4e-91
sp|Q922B2|SYD_MOUSE  Aspartyl-tRNA synthetase (Aspartate--tR...   333   5e-91
sp|P14868|SYD_HUMAN  Aspartyl-tRNA synthetase (Aspartate--tR...   332   1e-90
sp|Q03577|SYD_CAEEL  Aspartyl-tRNA synthetase (Aspartate--tR...   320   3e-87
sp|P04802|SYDC_YEAST  Aspartyl-tRNA synthetase, cytoplasmic ...   298   2e-80
sp|Q979P6|SYD_THEVO  Aspartyl-tRNA synthetase (Aspartate--tR...   177   3e-44
sp|Q8TQ68|SYD_METAC  Aspartyl-tRNA synthetase (Aspartate--tR...   172   8e-43
sp|Q58950|SYD_METJA  Aspartyl-tRNA synthetase (Aspartate--tR...   168   2e-41
sp|Q8Q0R2|SYD_METMA  Aspartyl-tRNA synthetase (Aspartate--tR...   167   3e-41
sp|Q8TXG4|SYD_METKA  Aspartyl-tRNA synthetase (Aspartate--tR...   166   6e-41

>sp|P15178|SYD_RAT Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS)
          Length = 501

 Score =  333 bits (854), Expect = 4e-91
 Identities = 162/254 (63%), Positives = 188/254 (74%)
 Frame = +2

Query: 2    QSPQLYNQMCIVGGMEKVFAIGPVFRAENSNTHRHLTEFTGLDMEMQFNNHYHEVLNTIC 181
            QSPQLY QMCI    EKVF IGPVFRAE+SNTHRHLTEF GLD+EM FN HYHEV+  I 
Sbjct: 248  QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYHEVVEEIA 307

Query: 182  ETLVHIFKQLETNFSAEIACVRKQFDSEPFEYLEPTLILTFAEGVAMLNEAGIEMSEHED 361
            +TLV IFK L+  F  EI  V KQF  EPF++LEPTL L + E +AML EAG+EM + ED
Sbjct: 308  DTLVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLRLEYCEALAMLREAGVEMDDEED 367

Query: 362  LSTTNEXXXXXXXXXXXXTDFYVLDKFPLSVRPFYTMPDEDYPGFSNSYDVFMRGEEIMS 541
            LST NE            TDFYVLDK+PL+VRPFYTMPD   P  SNSYD+FMRGEEI+S
Sbjct: 368  LSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILS 427

Query: 542  GAQRVHDAAKLRESAMKHRINLDTIKDYLESFEYGCKPHAGGGIGLDRVVMLYLGLDNIR 721
            GAQR+HD   L E A+ H I+L+ IK Y++SF +G  PHAGGGIGL+RV ML+LGL N+R
Sbjct: 428  GAQRIHDPQLLTERALHHGIDLEKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVR 487

Query: 722  RVSMFPRDPNRYRP 763
            + SMFPRDP R  P
Sbjct: 488  QTSMFPRDPKRLTP 501

>sp|Q922B2|SYD_MOUSE Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS)
          Length = 501

 Score =  333 bits (853), Expect = 5e-91
 Identities = 162/254 (63%), Positives = 188/254 (74%)
 Frame = +2

Query: 2    QSPQLYNQMCIVGGMEKVFAIGPVFRAENSNTHRHLTEFTGLDMEMQFNNHYHEVLNTIC 181
            QSPQLY QMCI    EKVF IGPVFRAE+SNTHRHLTEF GLD+EM FN HYHEV+  I 
Sbjct: 248  QSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYHEVVEEIA 307

Query: 182  ETLVHIFKQLETNFSAEIACVRKQFDSEPFEYLEPTLILTFAEGVAMLNEAGIEMSEHED 361
            +TLV IFK L+  F  EI  V KQF  EPF++LEPTL L + E +AML EAG+EM + ED
Sbjct: 308  DTLVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLRLEYCEALAMLREAGVEMDDEED 367

Query: 362  LSTTNEXXXXXXXXXXXXTDFYVLDKFPLSVRPFYTMPDEDYPGFSNSYDVFMRGEEIMS 541
            LST NE            TDFYVLDK+PL+VRPFYTMPD   P  SNSYD+FMRGEEI+S
Sbjct: 368  LSTPNEKLLGRLVKEKYDTDFYVLDKYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILS 427

Query: 542  GAQRVHDAAKLRESAMKHRINLDTIKDYLESFEYGCKPHAGGGIGLDRVVMLYLGLDNIR 721
            GAQR+HD   L E A+ H I+L+ IK Y++SF +G  PHAGGGIGL+RV ML+LGL N+R
Sbjct: 428  GAQRIHDPQLLTERALHHGIDLEKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVR 487

Query: 722  RVSMFPRDPNRYRP 763
            + SMFPRDP R  P
Sbjct: 488  QTSMFPRDPKRLTP 501

>sp|P14868|SYD_HUMAN Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS)
          Length = 501

 Score =  332 bits (850), Expect = 1e-90
 Identities = 159/254 (62%), Positives = 189/254 (74%)
 Frame = +2

Query: 2    QSPQLYNQMCIVGGMEKVFAIGPVFRAENSNTHRHLTEFTGLDMEMQFNNHYHEVLNTIC 181
            QSPQLY QMCI    EKVF+IGPVFRAE+SNTHRHLTEF GLD+EM FN HYHEV+  I 
Sbjct: 248  QSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYHEVMEEIA 307

Query: 182  ETLVHIFKQLETNFSAEIACVRKQFDSEPFEYLEPTLILTFAEGVAMLNEAGIEMSEHED 361
            +T+V IFK L+  F  EI  V KQF  EPF++LEPTL L + E +AML EAG+EM + +D
Sbjct: 308  DTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLRLEYCEALAMLREAGVEMGDEDD 367

Query: 362  LSTTNEXXXXXXXXXXXXTDFYVLDKFPLSVRPFYTMPDEDYPGFSNSYDVFMRGEEIMS 541
            LST NE            TDFY+LDK+PL+VRPFYTMPD   P  SNSYD+FMRGEEI+S
Sbjct: 368  LSTPNEKLLGHLVKEKYDTDFYILDKYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILS 427

Query: 542  GAQRVHDAAKLRESAMKHRINLDTIKDYLESFEYGCKPHAGGGIGLDRVVMLYLGLDNIR 721
            GAQR+HD   L E A+ H I+L+ IK Y++SF +G  PHAGGGIGL+RV ML+LGL N+R
Sbjct: 428  GAQRIHDPQLLTERALHHGIDLEKIKAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVR 487

Query: 722  RVSMFPRDPNRYRP 763
            + SMFPRDP R  P
Sbjct: 488  QTSMFPRDPKRLTP 501

>sp|Q03577|SYD_CAEEL Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS)
          Length = 531

 Score =  320 bits (820), Expect = 3e-87
 Identities = 153/254 (60%), Positives = 186/254 (73%)
 Frame = +2

Query: 2    QSPQLYNQMCIVGGMEKVFAIGPVFRAENSNTHRHLTEFTGLDMEMQFNNHYHEVLNTIC 181
            QSPQLY QM I G  EKV+ IGPVFRAE+SNTHRH+TEF GLD+EM FN HYHEV+ TI 
Sbjct: 278  QSPQLYKQMAIAGDFEKVYTIGPVFRAEDSNTHRHMTEFVGLDLEMAFNFHYHEVMETIA 337

Query: 182  ETLVHIFKQLETNFSAEIACVRKQFDSEPFEYLEPTLILTFAEGVAMLNEAGIEMSEHED 361
            E L  +FK L+ N+  EIA V  Q+ +EPF++ EP LIL + + + +L E GIE+ + +D
Sbjct: 338  EVLTQMFKGLQQNYQDEIAAVGNQYPAEPFQFCEPPLILKYPDAITLLRENGIEIGDEDD 397

Query: 362  LSTTNEXXXXXXXXXXXXTDFYVLDKFPLSVRPFYTMPDEDYPGFSNSYDVFMRGEEIMS 541
            LST  E            TDFYVLDKFPLSVRPFYTMPD     +SNSYD+FMRGEEI+S
Sbjct: 398  LSTPVEKFLGKLVKEKYSTDFYVLDKFPLSVRPFYTMPDAHDERYSNSYDMFMRGEEILS 457

Query: 542  GAQRVHDAAKLRESAMKHRINLDTIKDYLESFEYGCKPHAGGGIGLDRVVMLYLGLDNIR 721
            GAQR+HDA  L E A  H+++L  I+ Y++SF+YGC PHAGGGIGL+RV ML+LGL NIR
Sbjct: 458  GAQRIHDADMLVERAKHHQVDLAKIQSYIDSFKYGCPPHAGGGIGLERVTMLFLGLHNIR 517

Query: 722  RVSMFPRDPNRYRP 763
              S+FPRDP R  P
Sbjct: 518  LASLFPRDPKRLTP 531

>sp|P04802|SYDC_YEAST Aspartyl-tRNA synthetase, cytoplasmic (Aspartate--tRNA ligase)
            (AspRS)
          Length = 557

 Score =  298 bits (762), Expect = 2e-80
 Identities = 150/258 (58%), Positives = 178/258 (68%), Gaps = 4/258 (1%)
 Frame = +2

Query: 2    QSPQLYNQMCIVGGMEKVFAIGPVFRAENSNTHRHLTEFTGLDMEMQFNNHYHEVLNTIC 181
            QSPQ   Q  IV   E+V+ IGPVFRAENSNTHRH+TEFTGLDMEM F  HYHEVL+T+ 
Sbjct: 300  QSPQFNKQQLIVADFERVYEIGPVFRAENSNTHRHMTEFTGLDMEMAFEEHYHEVLDTLS 359

Query: 182  ETLVHIFKQLETNFSAEIACVRKQFDSEPFEYLEPTLI--LTFAEGVAMLNEAGIEMSEH 355
            E  V IF +L   F+ EI  VRKQ+  E F+  +   +  LT+ EG+ ML  AG E+ + 
Sbjct: 360  ELFVFIFSELPKRFAHEIELVRKQYPVEEFKLPKDGKMVRLTYKEGIEMLRAAGKEIGDF 419

Query: 356  EDLSTTNEXXXXXXXXXXXXTDFYVLDKFPLSVRPFYTMPDEDYPGFSNSYDVFMRGEEI 535
            EDLST NE            TDFY+LDKFPL +RPFYTMPD   P +SNSYD FMRGEEI
Sbjct: 420  EDLSTENEKFLGKLVRDKYDTDFYILDKFPLEIRPFYTMPDPANPKYSNSYDFFMRGEEI 479

Query: 536  MSGAQRVHDAAKLRESAMKHRINLDT--IKDYLESFEYGCKPHAGGGIGLDRVVMLYLGL 709
            +SGAQR+HD A L+E    H ++ +   +KDY + F YGC PHAGGGIGL+RVVM YL L
Sbjct: 480  LSGAQRIHDHALLQERMKAHGLSPEDPGLKDYCDGFSYGCPPHAGGGIGLERVVMFYLDL 539

Query: 710  DNIRRVSMFPRDPNRYRP 763
             NIRR S+FPRDP R RP
Sbjct: 540  KNIRRASLFPRDPKRLRP 557

>sp|Q979P6|SYD_THEVO Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS)
          Length = 428

 Score =  177 bits (450), Expect = 3e-44
 Identities = 100/257 (38%), Positives = 141/257 (54%), Gaps = 3/257 (1%)
 Frame = +2

Query: 2   QSPQLYNQMCIVGGMEKVFAIGPVFRAENSNTHRHLTEFTGLDMEMQFNNHYHEVLNTIC 181
           QSPQLY ++ +  G EKVF +GP FRAE  NT RHL EFT +D+EM F +H     N   
Sbjct: 185 QSPQLYKEILMSSGFEKVFEVGPAFRAEEHNTTRHLNEFTSIDIEMSFADH-----NDAM 239

Query: 182 ETLVHIFKQLETNFSAEIACVRKQFDSEPFEYLEPTLI---LTFAEGVAMLNEAGIEMSE 352
             L +  K    N   E     K           P +    +T+ E + +L + G+E   
Sbjct: 240 RILENAVKSGIENMINENG---KDLQENGINISIPEIPFPRITYKECIKLLEKEGLEFQF 296

Query: 353 HEDLSTTNEXXXXXXXXXXXXTDFYVLDKFPLSVRPFYTMPDEDYPGFSNSYDVFMRGEE 532
             D S                 DFY + ++P S+RPFYTMP+ D P  +NS+D+  R  E
Sbjct: 297 GNDFSPEE-----LRIIGRNFKDFYFITEWPSSLRPFYTMPNRDDPTITNSFDLQYREVE 351

Query: 533 IMSGAQRVHDAAKLRESAMKHRINLDTIKDYLESFEYGCKPHAGGGIGLDRVVMLYLGLD 712
           + SGAQRVHD   L +   + ++N+D+ K Y+++F+YG  PHAG G+GL+R+ M+ LGL+
Sbjct: 352 VTSGAQRVHDPDLLLKRFNEKKLNIDSFKFYIQAFKYGMPPHAGWGLGLERLTMIVLGLN 411

Query: 713 NIRRVSMFPRDPNRYRP 763
           NIR  ++FPRD  R  P
Sbjct: 412 NIRETTLFPRDRTRIIP 428

>sp|Q8TQ68|SYD_METAC Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS)
          Length = 444

 Score =  172 bits (437), Expect = 8e-43
 Identities = 99/257 (38%), Positives = 142/257 (55%), Gaps = 3/257 (1%)
 Frame = +2

Query: 2   QSPQLYNQMCIVGGMEKVFAIGPVFRAENSNTHRHLTEFTGLDMEMQFNNHYHEVLNTIC 181
           QSPQL+ Q+ + GG ++VF IGP+FRAE  +T RHL E T +D+E+ F +H+ +V+  + 
Sbjct: 195 QSPQLFKQILMGGGFDRVFEIGPIFRAEEHDTRRHLNEATSIDVEVSFADHF-DVMEILE 253

Query: 182 ETLVHIFKQLETNFSA--EIACVRKQFDSEPFEYLEPTLILTFAEGVAMLNEAGIE-MSE 352
             + HI+ ++  N  A  EI  V  +    PF      L LT+ E + ++N    E M  
Sbjct: 254 NLVAHIYTRVIENCKASLEILGVELKVPKTPF------LKLTYDEVIEIVNSRCEEKMHW 307

Query: 353 HEDLSTTNEXXXXXXXXXXXXTDFYVLDKFPLSVRPFYTMPDEDYPGFSNSYDVFMRGEE 532
            +DL T  E               Y +  +P  ++PFY MP ED P FS S+D+  R  E
Sbjct: 308 GDDLGTLGEHTVGNYVYETTGESHYFIIDWPTEIKPFYAMPYEDRPEFSKSFDMMHRTME 367

Query: 533 IMSGAQRVHDAAKLRESAMKHRINLDTIKDYLESFEYGCKPHAGGGIGLDRVVMLYLGLD 712
           + SGAQR+H +  L+       +N D  + YL++FEYG  PHAG G+G +R VM  LG +
Sbjct: 368 LSSGAQRIHISELLKSRIESQGLNPDGFEFYLKAFEYGMPPHAGWGMGCERFVMTMLGTE 427

Query: 713 NIRRVSMFPRDPNRYRP 763
           NIR   +FPRD  R  P
Sbjct: 428 NIRDTVLFPRDRRRLSP 444

>sp|Q58950|SYD_METJA Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS)
          Length = 438

 Score =  168 bits (425), Expect = 2e-41
 Identities = 95/254 (37%), Positives = 138/254 (54%)
 Frame = +2

Query: 2   QSPQLYNQMCIVGGMEKVFAIGPVFRAENSNTHRHLTEFTGLDMEMQFNNHYHEVLNTIC 181
           QSPQLY QM +  G+++VF I P+FRAE  NT RHL E T +D+EM F +   + ++ + 
Sbjct: 195 QSPQLYKQMLMATGLDRVFEIAPIFRAEEHNTRRHLNEATSIDIEMAFADD-KDAMDILE 253

Query: 182 ETLVHIFKQLETNFSAEIACVRKQFDSEPFEYLEPTLILTFAEGVAMLNEAGIEMSEHED 361
           + + + F  +  N   EI  +  +F+  P ++      +T+ E + + N  G+E+S  ED
Sbjct: 254 KVVYNAFVDVYENRKKEIETLGIEFELPPEKFDR----ITYDEAIDIANAKGVEISWGED 309

Query: 362 LSTTNEXXXXXXXXXXXXTDFYVLDKFPLSVRPFYTMPDEDYPGFSNSYDVFMRGEEIMS 541
           LS   E               Y +  +P  +RPFYTMPDE  P    ++D+  +  EI S
Sbjct: 310 LSREAEKAIGEEMEG-----LYFITDWPSEIRPFYTMPDEKNPNICKAFDLMYKDLEISS 364

Query: 542 GAQRVHDAAKLRESAMKHRINLDTIKDYLESFEYGCKPHAGGGIGLDRVVMLYLGLDNIR 721
           GAQR+H    L E+  K  +N D    YLE+F+YG  PHAG G+G DR  M+    +NIR
Sbjct: 365 GAQRIHLYDLLVENIKKKGLNPDGFTYYLEAFKYGMPPHAGWGLGADRFTMVLTQQENIR 424

Query: 722 RVSMFPRDPNRYRP 763
              +FPRD  R  P
Sbjct: 425 ECVLFPRDRQRLTP 438

>sp|Q8Q0R2|SYD_METMA Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS)
          Length = 444

 Score =  167 bits (424), Expect = 3e-41
 Identities = 95/257 (36%), Positives = 142/257 (55%), Gaps = 3/257 (1%)
 Frame = +2

Query: 2   QSPQLYNQMCIVGGMEKVFAIGPVFRAENSNTHRHLTEFTGLDMEMQFNNHYHEVLNTIC 181
           QSPQL+ Q+ + GG ++VF IGP+FRAE  +T RHL E T +D+E+ F +H+ +V+  + 
Sbjct: 195 QSPQLFKQILMSGGFDRVFEIGPIFRAEEHDTRRHLNEATSIDVEVSFADHF-DVMELLE 253

Query: 182 ETLVHIFKQLETNF--SAEIACVRKQFDSEPFEYLEPTLILTFAEGVAMLNEAGIE-MSE 352
             + +++ ++  N   S E+  V  +    PF      L LT+ E + ++N    E M  
Sbjct: 254 NLVAYVYTRVIENCKSSLEVLGVDLKVPKTPF------LKLTYDEVIEIINSRCEEKMHW 307

Query: 353 HEDLSTTNEXXXXXXXXXXXXTDFYVLDKFPLSVRPFYTMPDEDYPGFSNSYDVFMRGEE 532
            +DL T  E               Y +  +P  ++PFY MP ED P FS S+D+  R  E
Sbjct: 308 GDDLGTLGEHTVGDHVYETTGESHYFIIDWPTEIKPFYAMPYEDRPEFSKSFDMMHRTME 367

Query: 533 IMSGAQRVHDAAKLRESAMKHRINLDTIKDYLESFEYGCKPHAGGGIGLDRVVMLYLGLD 712
           + SGAQR+H  + L+       +N D  + YL++FE+G  PHAG G+G +R VM  LG +
Sbjct: 368 LSSGAQRIHIPSLLKNRIESQGLNPDGFEFYLKAFEFGMPPHAGWGMGCERFVMTMLGTE 427

Query: 713 NIRRVSMFPRDPNRYRP 763
           NIR   +FPRD  R  P
Sbjct: 428 NIRDTVLFPRDRRRLSP 444

>sp|Q8TXG4|SYD_METKA Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS)
          Length = 431

 Score =  166 bits (421), Expect = 6e-41
 Identities = 93/254 (36%), Positives = 139/254 (54%)
 Frame = +2

Query: 2   QSPQLYNQMCIVGGMEKVFAIGPVFRAENSNTHRHLTEFTGLDMEMQFNNHYHEVLNTIC 181
           QSPQLY QM +  G E+V+ IGP+FRAE  NT RHL E   +D+EM F     +V+  + 
Sbjct: 189 QSPQLYKQMLMAAGFERVYEIGPIFRAEEHNTRRHLNEAISVDIEMSFIESEEDVMRVLE 248

Query: 182 ETLVHIFKQLETNFSAEIACVRKQFDSEPFEYLEPTLILTFAEGVAMLNEAGIEMSEHED 361
           E L H+F+++      E+    +  D E  E   P   +T+ E + +L+E GIE+   ED
Sbjct: 249 ELLAHVFRKVREECEKEL----EALDRELPELETPFERITYEETLDLLSEHGIEVEWGED 304

Query: 362 LSTTNEXXXXXXXXXXXXTDFYVLDKFPLSVRPFYTMPDEDYPGFSNSYDVFMRGEEIMS 541
           L T  E             + + + ++P   RPFYTM  +D    + ++D+  +G E+ S
Sbjct: 305 LPTEAE-----RKLGEIFEEPFFITEWpreTRPFYTMAKDD--EVTTAFDLMYQGLELAS 357

Query: 542 GAQRVHDAAKLRESAMKHRINLDTIKDYLESFEYGCKPHAGGGIGLDRVVMLYLGLDNIR 721
           GAQR H    L     +  ++ +  + YLE+F+YG  PH G G+GL+R +M   G +NIR
Sbjct: 358 GAQREHRYDVLVRQIEEQGLSPEDFRHYLEAFKYGMPPHGGWGLGLERTLMTITGAENIR 417

Query: 722 RVSMFPRDPNRYRP 763
            V++FPRD  R  P
Sbjct: 418 EVTLFPRDRKRLHP 431

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,996,264
Number of Sequences: 369166
Number of extensions: 2288021
Number of successful extensions: 6911
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6562
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8582957970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00716

  1. Dr_sW_018_L14
  2. Dr_sW_026_K01