Planaria EST Database

DrC_00713

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00713
         (891 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9WUL7|ARL3_MOUSE  ADP-ribosylation factor-like protein 3      273   4e-73
sp|P36405|ARL3_HUMAN  ADP-ribosylation factor-like protein 3      273   4e-73
sp|P37996|ARL3_RAT  ADP-ribosylation factor-like protein 3 (...   272   1e-72
sp|O45379|ARL3_CAEEL  ADP-ribosylation factor-like protein 3      223   4e-58
sp|Q9D0J4|ARL2_MOUSE  ADP-ribosylation factor-like protein 2      206   9e-53
sp|O08697|ARL2_RAT  ADP-ribosylation factor-like protein 2        206   9e-53
sp|P36404|ARL2_HUMAN  ADP-ribosylation factor-like protein 2      205   2e-52
sp|Q9ZPX1|ARF5_ARATH  Probable ADP-ribosylation factor At2g1...   182   1e-45
sp|Q06849|ARL2_DROME  GTP-binding ADP-ribosylation factor ho...   177   3e-44
sp|Q19705|ARFM_CAEEL  GTP-binding ADP-ribosylation factor ho...   177   4e-44

>sp|Q9WUL7|ARL3_MOUSE ADP-ribosylation factor-like protein 3
          Length = 182

 Score =  273 bits (699), Expect = 4e-73
 Identities = 131/181 (72%), Positives = 155/181 (85%)
 Frame = +1

Query: 58  MGLLDLLRKMKTKTGQEVRILTLGLDNAGKTTLLKSLASEEINQITPTQGFNVKTVQTKG 237
           MGLL +LRK+K+   QEVRIL LGLDNAGKTTLLK LASE+I+ ITPTQGFN+K+VQ++G
Sbjct: 1   MGLLSILRKLKSAPDQEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQG 60

Query: 238 FKLNVWDIGGQRRIRPYWRNYFENTDVLIYVIDSADKKRFNETSEELNELLMESKLTGVP 417
           FKLNVWDIGGQR+IRPYWR+YFENTD+LIYVIDSAD+KRF ET +EL ELL E KL+ VP
Sbjct: 61  FKLNVWDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVP 120

Query: 418 LLIYANKQDLMNAAPASEISTGLNLLSIRDREWQIQPCSAQTGEGVQQGLEWALSSIEGR 597
           +LI+ANKQDL+ AAPASEI+ GLNL +IRDR WQIQ CSA TGEGVQ G+ W   ++  +
Sbjct: 121 VLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAK 180

Query: 598 K 600
           K
Sbjct: 181 K 181

>sp|P36405|ARL3_HUMAN ADP-ribosylation factor-like protein 3
          Length = 182

 Score =  273 bits (699), Expect = 4e-73
 Identities = 131/181 (72%), Positives = 155/181 (85%)
 Frame = +1

Query: 58  MGLLDLLRKMKTKTGQEVRILTLGLDNAGKTTLLKSLASEEINQITPTQGFNVKTVQTKG 237
           MGLL +LRK+K+   QEVRIL LGLDNAGKTTLLK LASE+I+ ITPTQGFN+K+VQ++G
Sbjct: 1   MGLLSILRKLKSAPDQEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQG 60

Query: 238 FKLNVWDIGGQRRIRPYWRNYFENTDVLIYVIDSADKKRFNETSEELNELLMESKLTGVP 417
           FKLNVWDIGGQR+IRPYW+NYFENTD+LIYVIDSAD+KRF ET +EL ELL E KL+ VP
Sbjct: 61  FKLNVWDIGGQRKIRPYWKNYFENTDILIYVIDSADRKRFEETGQELAELLEEEKLSCVP 120

Query: 418 LLIYANKQDLMNAAPASEISTGLNLLSIRDREWQIQPCSAQTGEGVQQGLEWALSSIEGR 597
           +LI+ANKQDL+ AAPASEI+ GLNL +IRDR WQIQ CSA TGEGVQ G+ W   ++  +
Sbjct: 121 VLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAK 180

Query: 598 K 600
           K
Sbjct: 181 K 181

>sp|P37996|ARL3_RAT ADP-ribosylation factor-like protein 3 (ARD3)
          Length = 182

 Score =  272 bits (695), Expect = 1e-72
 Identities = 129/181 (71%), Positives = 155/181 (85%)
 Frame = +1

Query: 58  MGLLDLLRKMKTKTGQEVRILTLGLDNAGKTTLLKSLASEEINQITPTQGFNVKTVQTKG 237
           MGLL +LRK+K+   QEVRIL LGLDNAGKTTLLK LASE+I+ ITPTQGFN+K+VQ++G
Sbjct: 1   MGLLSILRKLKSAPDQEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQG 60

Query: 238 FKLNVWDIGGQRRIRPYWRNYFENTDVLIYVIDSADKKRFNETSEELNELLMESKLTGVP 417
           FKLNVWDIGGQR+IRPYWR+YFENTD+LIYVIDSAD+KRF ET +EL ELL E KL+ VP
Sbjct: 61  FKLNVWDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVP 120

Query: 418 LLIYANKQDLMNAAPASEISTGLNLLSIRDREWQIQPCSAQTGEGVQQGLEWALSSIEGR 597
           +L++ANKQDL+ AAPA+EI+ GLNL +IRDR WQIQ CSA TGEGVQ G+ W   ++  +
Sbjct: 121 VLVFANKQDLLTAAPAAEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAK 180

Query: 598 K 600
           K
Sbjct: 181 K 181

>sp|O45379|ARL3_CAEEL ADP-ribosylation factor-like protein 3
          Length = 184

 Score =  223 bits (569), Expect = 4e-58
 Identities = 108/179 (60%), Positives = 137/179 (76%), Gaps = 1/179 (0%)
 Frame = +1

Query: 58  MGLLDLLRKMKTKTGQEVRILTLGLDNAGKTTLLKSLASEEINQITPTQGFNVKTVQTKG 237
           MGL+D+L+  K+ +G+E+RIL LGLDNAGKTT+LK L+SE++  +TPT+GFNVKTV   G
Sbjct: 1   MGLIDVLKSFKSPSGREIRILLLGLDNAGKTTILKQLSSEDVQHVTPTKGFNVKTVAAMG 60

Query: 238 -FKLNVWDIGGQRRIRPYWRNYFENTDVLIYVIDSADKKRFNETSEELNELLMESKLTGV 414
             +LNVWDIGGQR IRPYW NY+EN D LI+VIDS DKKRF+E + EL ELL E KL  V
Sbjct: 61  DIRLNVWDIGGQRSIRPYWSNYYENIDTLIFVIDSNDKKRFDEMNIELGELLDEEKLRKV 120

Query: 415 PLLIYANKQDLMNAAPASEISTGLNLLSIRDREWQIQPCSAQTGEGVQQGLEWALSSIE 591
           P+LI+ANKQDL+ AA + EI+  LNL  +RDR W IQ CSA   EG+  G+ W  S+++
Sbjct: 121 PVLIFANKQDLVTAASSEEITRKLNLDLLRDRTWHIQACSALKNEGINDGITWVASNLK 179

>sp|Q9D0J4|ARL2_MOUSE ADP-ribosylation factor-like protein 2
          Length = 184

 Score =  206 bits (523), Expect = 9e-53
 Identities = 98/180 (54%), Positives = 130/180 (72%)
 Frame = +1

Query: 58  MGLLDLLRKMKTKTGQEVRILTLGLDNAGKTTLLKSLASEEINQITPTQGFNVKTVQTKG 237
           MGLL +L+KMK K  +E+R+L LGLDNAGKTT+LK    E+++ I+PT GFN+KT++ +G
Sbjct: 1   MGLLTILKKMKQKE-RELRLLMLGLDNAGKTTILKKFNGEDVDTISPTLGFNIKTLEHRG 59

Query: 238 FKLNVWDIGGQRRIRPYWRNYFENTDVLIYVIDSADKKRFNETSEELNELLMESKLTGVP 417
           FKLN+WD+GGQ+ +R YWRNYFE+TD LI+V+DSAD++R  +   EL  LL+E +L G  
Sbjct: 60  FKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGAT 119

Query: 418 LLIYANKQDLMNAAPASEISTGLNLLSIRDREWQIQPCSAQTGEGVQQGLEWALSSIEGR 597
           LLI+ANKQDL  A   + I   L L SIR   W+IQ CSA TGE +  G++W L  I  R
Sbjct: 120 LLIFANKQDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDISSR 179

>sp|O08697|ARL2_RAT ADP-ribosylation factor-like protein 2
          Length = 184

 Score =  206 bits (523), Expect = 9e-53
 Identities = 98/180 (54%), Positives = 130/180 (72%)
 Frame = +1

Query: 58  MGLLDLLRKMKTKTGQEVRILTLGLDNAGKTTLLKSLASEEINQITPTQGFNVKTVQTKG 237
           MGLL +L+KMK K  ++VR+L LGLDNAGKTT+LK    E+++ I+PT GFN+KT++ +G
Sbjct: 1   MGLLTILKKMKQKE-RDVRLLMLGLDNAGKTTILKKFNGEDVDTISPTLGFNIKTLEHRG 59

Query: 238 FKLNVWDIGGQRRIRPYWRNYFENTDVLIYVIDSADKKRFNETSEELNELLMESKLTGVP 417
           FKLN+WD+GGQ+ +R YWRNYFE+TD LI+V+DSAD++R  +   EL  LL+E +L G  
Sbjct: 60  FKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGAT 119

Query: 418 LLIYANKQDLMNAAPASEISTGLNLLSIRDREWQIQPCSAQTGEGVQQGLEWALSSIEGR 597
           LLI+ANKQDL  A   + I   L L SIR   W+IQ CSA TGE +  G++W L  I  R
Sbjct: 120 LLIFANKQDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDISSR 179

>sp|P36404|ARL2_HUMAN ADP-ribosylation factor-like protein 2
          Length = 184

 Score =  205 bits (521), Expect = 2e-52
 Identities = 99/180 (55%), Positives = 130/180 (72%)
 Frame = +1

Query: 58  MGLLDLLRKMKTKTGQEVRILTLGLDNAGKTTLLKSLASEEINQITPTQGFNVKTVQTKG 237
           MGLL +L+KMK K  +E+R+L LGLDNAGKTT+LK    E+I+ I+PT GFN+KT++ +G
Sbjct: 1   MGLLTILKKMKQKE-RELRLLMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRG 59

Query: 238 FKLNVWDIGGQRRIRPYWRNYFENTDVLIYVIDSADKKRFNETSEELNELLMESKLTGVP 417
           FKLN+WD+GGQ+ +R YWRNYFE+TD LI+V+DSAD++R  +   EL  LL+E +L G  
Sbjct: 60  FKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGAT 119

Query: 418 LLIYANKQDLMNAAPASEISTGLNLLSIRDREWQIQPCSAQTGEGVQQGLEWALSSIEGR 597
           LLI+ANKQDL  A  ++ I   L L SIR   W IQ CSA TGE +  G++W L  I  R
Sbjct: 120 LLIFANKQDLPGALSSNAIREALELDSIRSHHWCIQGCSAVTGENLLPGIDWLLDDISSR 179

>sp|Q9ZPX1|ARF5_ARATH Probable ADP-ribosylation factor At2g18390
          Length = 185

 Score =  182 bits (462), Expect = 1e-45
 Identities = 89/181 (49%), Positives = 126/181 (69%), Gaps = 1/181 (0%)
 Frame = +1

Query: 58  MGLLDLLRKMKTKTGQEVRILTLGLDNAGKTTLLKSLASEEINQITPTQGFNVKTVQTKG 237
           MGLL ++RK+K K  +E+RIL +GLDN+GKTT++  +  E+ + I+PT GFN+KT+  + 
Sbjct: 1   MGLLSIIRKIKKKE-KEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYQK 59

Query: 238 FKLNVWDIGGQRRIRPYWRNYFENTDVLIYVIDSADKKRFNETSEELNELLMESKLTGVP 417
           + LN+WD+GGQ+ IR YWRNYFE TD L++V+DS+D +R ++   EL+ LL E +L G  
Sbjct: 60  YTLNIWDVGGQKTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLAGSS 119

Query: 418 LLIYANKQDLMNAAPASEISTGLNLLSI-RDREWQIQPCSAQTGEGVQQGLEWALSSIEG 594
           LLI ANKQD+  A    EI   LNL S+ + R W+I  CSA TGEG+ +G +W +  I  
Sbjct: 120 LLILANKQDIQGALTPDEIGKVLNLESMDKSRHWKIVGCSAYTGEGLLEGFDWLVQDIAS 179

Query: 595 R 597
           R
Sbjct: 180 R 180

>sp|Q06849|ARL2_DROME GTP-binding ADP-ribosylation factor homolog 2 protein
          Length = 184

 Score =  177 bits (450), Expect = 3e-44
 Identities = 87/180 (48%), Positives = 120/180 (66%)
 Frame = +1

Query: 58  MGLLDLLRKMKTKTGQEVRILTLGLDNAGKTTLLKSLASEEINQITPTQGFNVKTVQTKG 237
           MG L +L+KM+ K  +E+RIL LGLDNAGKTT+LK    E I+ I+PT GFN+KT++  G
Sbjct: 1   MGFLTVLKKMRQKE-REMRILLLGLDNAGKTTILKRFNGEPIDTISPTLGFNIKTLEHNG 59

Query: 238 FKLNVWDIGGQRRIRPYWRNYFENTDVLIYVIDSADKKRFNETSEELNELLMESKLTGVP 417
           + LN+WD+GGQ+ +R YWRNYFE+TD L++V+DSAD+ R     +EL  LL E +L G  
Sbjct: 60  YTLNMWDVGGQKSLRSYWRNYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGAT 119

Query: 418 LLIYANKQDLMNAAPASEISTGLNLLSIRDREWQIQPCSAQTGEGVQQGLEWALSSIEGR 597
           LL+  NKQDL  A  ++EI   L+L  I    W +   SA TGE +   ++W ++ I  R
Sbjct: 120 LLVLCNKQDLPGALSSNEIKEILHLEDITTHHWLVAGVSAVTGEKLLSSMDWLIADIAKR 179

>sp|Q19705|ARFM_CAEEL GTP-binding ADP-ribosylation factor homolog protein evl-20
          Length = 184

 Score =  177 bits (449), Expect = 4e-44
 Identities = 86/180 (47%), Positives = 121/180 (67%)
 Frame = +1

Query: 58  MGLLDLLRKMKTKTGQEVRILTLGLDNAGKTTLLKSLASEEINQITPTQGFNVKTVQTKG 237
           MG L +LRK + +  +E+RIL LGLDNAGKTTL+K    E  + I PT GF++KTV  K 
Sbjct: 1   MGFLKILRKQRARE-REMRILILGLDNAGKTTLMKKFLDEPTDTIEPTLGFDIKTVHFKD 59

Query: 238 FKLNVWDIGGQRRIRPYWRNYFENTDVLIYVIDSADKKRFNETSEELNELLMESKLTGVP 417
           F+LN+WD+GGQ+ +R YW+NYFE+TD LI+V+DS+D++R  + SEEL +LL E +L G  
Sbjct: 60  FQLNLWDVGGQKSLRSYWKNYFESTDALIWVVDSSDRERLLQCSEELKKLLGEERLAGAS 119

Query: 418 LLIYANKQDLMNAAPASEISTGLNLLSIRDREWQIQPCSAQTGEGVQQGLEWALSSIEGR 597
           LL+ ANK DL  A   + I+  L+L SI+   W+I  C A +G+ + Q + W    +  R
Sbjct: 120 LLVLANKSDLPGAIDVNSIAQVLDLHSIKSHHWKIFSCCALSGDRLVQAMTWLCDDVGSR 179

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,070,779
Number of Sequences: 369166
Number of extensions: 1646992
Number of successful extensions: 5519
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5457
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8934348180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00713

  1. Dr_sW_015_C05
  2. Dr_sW_018_L07
  3. Dr_sW_026_B21