DrC_00712
- Cluster detail
- GO Category : Not Available
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_00712 (1529 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|Q8WXA9|SFR12_HUMAN Splicing factor, arginine/serine-rich... 66 3e-10 sp|P35663|CYLC1_HUMAN Cylicin-1 (Cylicin I) (Multiple-band ... 60 1e-08 sp|P35662|CYL1_BOVIN Cylicin-1 (Cylicin I) (Multiple-band p... 56 3e-07 sp|Q8BZX4|SFR12_MOUSE Splicing factor, arginine/serine-rich... 55 4e-07 sp|P54705|SNWA_DICDI Protein snwA 55 5e-07 sp|Q5T200|K0853_HUMAN Protein KIAA0853 54 1e-06 sp|Q9JKL7|SFR12_RAT Splicing factor, arginine/serine-rich 1... 52 6e-06 sp|P49756|RBM25_HUMAN Probable RNA-binding protein 25 (RNA-... 51 8e-06 sp|O01159|RSP7_CAEEL Probable splicing factor, arginine/ser... 51 1e-05 sp|Q9U7E0|ATRX_CAEEL Transcriptional regulator ATRX homolog... 50 1e-05
>sp|Q8WXA9|SFR12_HUMAN Splicing factor, arginine/serine-rich 12 (Serine-arginine-rich splicing regulatory protein 86) (SRrp86) (Splicing regulatory protein 508) (SRrp508) Length = 508 Score = 65.9 bits (159), Expect = 3e-10 Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 5/229 (2%) Frame = +3 Query: 627 DKIRVRESDIKKDIGREMRESENKRREMNKDRKESKAVDKEFQKDTRQVXXXXXXXXXXX 806 +K RV+E D +K+ RE + K R NKDR DKE +KD Sbjct: 270 EKERVKEKDREKEREREKEREKEKERGKNKDR------DKEREKD--------------- 308 Query: 807 XXXXXXXXNKSTNEFEREVTKDKGSDKFTRRSYETSRNTDKDAMKTGKKEMDSRNSKSEF 986 + E +RE ++K +K + E ++ +K+ K KE+D + K Sbjct: 309 --------REKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKK--- 357 Query: 987 DRDDRKPKSYRDIDARDSAGDRSQRLVDSKPRNERSEQQRKDNDSEKRFLKDSRSKLYES 1166 D+ R P + R + R +R + R+ S + + + + KR S S + Sbjct: 358 DKKSRTPPRSYNASRRSRSSSRERR----RRRSRSSSRSPRTSKTIKRKSSRSPSPRSRN 413 Query: 1167 KDDRKDLKRK--ISEEKDNSMHTSNRQPSGD---KQKLLLHSDTKKRRE 1298 K D+K K + ISE ++ TS R+ S D K+KL +S + K +E Sbjct: 414 KKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKE 462
Score = 41.2 bits (95), Expect = 0.008
Identities = 28/120 (23%), Positives = 50/120 (41%)
Frame = +3
Query: 24 RRKDSYKDREYNKKDYVNDSVKDLRKERENIRDSRDAGKESRAREHREPMKENKDIDRRS 203
R KD KDRE ++ + KD KE+E +D ++ R++E E K++K
Sbjct: 309 REKDKEKDRERERE---KEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPP 365
Query: 204 KIVSDEKDGRQEQRDINKXXXXXXXXXXXXPKYNEREIRRDPKESDRDLKRDSKTNEKEH 383
+ + + R R+ + K +R+ R P R+ K + E++H
Sbjct: 366 RSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDH 425
Score = 40.4 bits (93), Expect = 0.014
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Frame = +3
Query: 24 RRKDSYKDREYNKKDYVNDSVKDLR---KERENIRDSRDAGKESRAREHREPMKE---NK 185
+R S + R+ + + D KD R KE+E +++ +D KE + RE KE NK
Sbjct: 241 KRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKE-KDREKEREREKEREKEKERGKNK 299
Query: 186 DID--RRSKIVSDEKDGRQEQRDINKXXXXXXXXXXXXPKYNEREIRRDPKESDRDLKRD 359
D D R D++ R+ +R+ K ERE R KE D K+D
Sbjct: 300 DRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRS-KEIDEKRKKD 358
Query: 360 SKT 368
K+
Sbjct: 359 KKS 361
Score = 38.1 bits (87), Expect = 0.069
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Frame = +3
Query: 24 RRKDSYKDREYNKKDYVNDSVKDLRKERENIRDSRDAGKESRAR-EHREPMKENKDIDRR 200
R + KDR +K + S R++ + SRD K++R + + +E +KE DR
Sbjct: 224 RSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEK---DRE 280
Query: 201 SKIVSDEKDGRQEQRDINKXXXXXXXXXXXXPKYNEREIRRDPK-ESDRDLKRDSKTNEK 377
+ +++ ++++R NK K +RE R+ + E DRD K K +K
Sbjct: 281 KEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRD-KEKEKEQDK 339
Query: 378 E 380
E
Sbjct: 340 E 340
Score = 33.5 bits (75), Expect = 1.7
Identities = 23/104 (22%), Positives = 42/104 (40%)
Frame = +3
Query: 987 DRDDRKPKSYRDIDARDSAGDRSQRLVDSKPRNERSEQQRKDNDSEKRFLKDSRSKLYES 1166
+R + +S+ +R S+ S+R RS + + ++R K K +S
Sbjct: 186 ERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKS 245
Query: 1167 KDDRKDLKRKISEEKDNSMHTSNRQPSGDKQKLLLHSDTKKRRE 1298
++ RK R S +K ++ K+K D +K RE
Sbjct: 246 RERRKSRSRSHSRDKRKDTREKIKEKERVKEK-----DREKERE 284
>sp|P35663|CYLC1_HUMAN Cylicin-1 (Cylicin I) (Multiple-band polypeptide I) Length = 651 Score = 60.5 bits (145), Expect = 1e-08 Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 13/227 (5%) Frame = +3 Query: 657 KKDIGREMRESENKRREMNKD-RKESKAVDKEFQKDTRQVXXXXXXXXXXXXXXXXXXXN 833 KKD + ++S + E +KD +K+SK V K +KD ++ Sbjct: 285 KKDTKKNAKKSSDAESEDSKDAKKDSKKVKKNVKKDDKKKDVKKDTESTDAESGDSKDER 344 Query: 834 KSTNEFEREVTKDKGSDKFTRRSYETSRNTDKDAMKTGKKEMDSRNSKSEFDRDDRK--- 1004 K T + ++++ KD K + Y S +T+ K + DSRN K DD+K Sbjct: 345 KDTKKDKKKLKKD--DKKKDTKKYPESTDTESGDAKDARN--DSRNLKKASKNDDKKKDA 400 Query: 1005 ------PKSYRDIDARDSAGDRSQRLVDSKPRNERS---EQQRKDNDSEKRFLKDSRSKL 1157 S ++++++S D + DSK N++S +++ D DSE + DS+ Sbjct: 401 KKITFSTDSESELESKESQKDEKKDKKDSKTDNKKSVKNDEESTDADSEPK--GDSKKGK 458 Query: 1158 YESKDDRKDLKRKISEEKDNSMHTSNRQPSGDKQKLLLHSDTKKRRE 1298 + K +KD K K ++KD + + + D L L D K +E Sbjct: 459 KDEKKGKKDSK-KDDKKKDAKKNAESTEMESD---LELKKDKKHSKE 501
Score = 54.3 bits (129), Expect = 9e-07
Identities = 46/227 (20%), Positives = 93/227 (40%), Gaps = 8/227 (3%)
Frame = +3
Query: 630 KIRVRESDIKKDIGREMRESENKRREMNKDRKESKAVDKEFQKDTRQVXXXXXXXXXXXX 809
K V++ D KKD+ ++ ++ + + +RK++K K+ +KD ++
Sbjct: 314 KKNVKKDDKKKDVKKDTESTDAESGDSKDERKDTKKDKKKLKKDDKK------------- 360
Query: 810 XXXXXXXNKSTNEFEREVTKDKGSDKFTRRSYETSRNTDK--DAMKTGKKEMDSRNSKSE 983
K T ++ + G K R + K D K KK S +S+SE
Sbjct: 361 --------KDTKKYPESTDTESGDAKDARNDSRNLKKASKNDDKKKDAKKITFSTDSESE 412
Query: 984 FD-----RDDRKPKSYRDIDARDSA-GDRSQRLVDSKPRNERSEQQRKDNDSEKRFLKDS 1145
+ +D++K K D + S D DS+P+ + + ++ + +K KD
Sbjct: 413 LESKESQKDEKKDKKDSKTDNKKSVKNDEESTDADSEPKGDSKKGKKDEKKGKKDSKKDD 472
Query: 1146 RSKLYESKDDRKDLKRKISEEKDNSMHTSNRQPSGDKQKLLLHSDTK 1286
+ K + + +++ + +KD H+ ++ S K DT+
Sbjct: 473 KKKDAKKNAESTEMESDLELKKDKK-HSKEKKGSKKDIKKDARKDTE 518
Score = 38.5 bits (88), Expect = 0.053
Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 12/131 (9%)
Frame = +3
Query: 27 RKDSYKDREYNKKDYVNDSVKDLRKERENIR----DSRDAGKESRAREHREPMKENKDID 194
+KDS K ++ KKD D KD++K+ E+ DS+D K+++ ++ ++ K++K D
Sbjct: 307 KKDSKKVKKNVKKD---DKKKDVKKDTESTDAESGDSKDERKDTK-KDKKKLKKDDKKKD 362
Query: 195 RRSKIVS------DEKDGRQEQRDINKXXXXXXXXXXXXPKY--NEREIRRDPKESDRDL 350
+ S D KD R + R++ K + E + KES +D
Sbjct: 363 TKKYPESTDTESGDAKDARNDSRNLKKASKNDDKKKDAKKITFSTDSESELESKESQKDE 422
Query: 351 KRDSKTNEKEH 383
K+D K ++ ++
Sbjct: 423 KKDKKDSKTDN 433
Score = 36.2 bits (82), Expect = 0.26
Identities = 32/125 (25%), Positives = 55/125 (44%)
Frame = +3
Query: 6 DMHRDLRRKDSYKDREYNKKDYVNDSVKDLRKERENIRDSRDAGKESRAREHREPMKENK 185
D +L K+S KD + +KKD D+ K ++ + E S DA E P ++K
Sbjct: 408 DSESELESKESQKDEKKDKKDSKTDNKKSVKNDEE----STDADSE--------PKGDSK 455
Query: 186 DIDRRSKIVSDEKDGRQEQRDINKXXXXXXXXXXXXPKYNEREIRRDPKESDRDLKRDSK 365
K DEK G+++ + +K K ++ ESD +LK+D K
Sbjct: 456 ------KGKKDEKKGKKDSKKDDK------------KKDAKKNAESTEMESDLELKKDKK 497
Query: 366 TNEKE 380
++++
Sbjct: 498 HSKEK 502
Score = 35.8 bits (81), Expect = 0.34
Identities = 48/217 (22%), Positives = 86/217 (39%), Gaps = 17/217 (7%)
Frame = +3
Query: 645 ESDIKKDIGREMRESENKRREMNKDRKESKAVDKEF-QKDTRQVXXXXXXXXXXXXXXXX 821
++ +K E + E N + + SK V K QKD +
Sbjct: 160 KTPLKSSHENEQSKKSKSSSETNPESQNSKTVSKNCSQKDKKD-----SKNSKKTNTEFL 214
Query: 822 XXXNKSTNEFEREVTKDKGSDKFTRRSYETSRNTDKDAMKTGKKEMDS------------ 965
N + +R T + D + E S N D M G+ + +S
Sbjct: 215 HTKNNPKKDLKRSKTSN---DPISEICSENSLNVDF-LMLVGQSDDESINFDAWLRNYSQ 270
Query: 966 RNSKSEFDRDDRKPKSYRDIDARDSAGDRSQRLVDSKPRNERSEQQRKDNDSEKRFLKDS 1145
NSK+ + + K +A+ S+ S+ D+K +++ ++ K +D +K KD+
Sbjct: 271 NNSKNYSLKYTKYTKKDTKKNAKKSSDAESEDSKDAKKDSKKVKKNVKKDDKKKDVKKDT 330
Query: 1146 RS---KLYESKDDRKDLKR-KISEEKDNSMHTSNRQP 1244
S + +SKD+RKD K+ K +KD+ + + P
Sbjct: 331 ESTDAESGDSKDERKDTKKDKKKLKKDDKKKDTKKYP 367
Score = 34.7 bits (78), Expect = 0.76
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 3/118 (2%)
Frame = +3
Query: 30 KDSYKDREYNKKDYVNDSVKDLRKERENIRDSRDAGKESRAREHREPMKENKD---IDRR 200
KD+ D KK ND D +K+ + I S D+ E ++E ++ K++K D +
Sbjct: 378 KDARNDSRNLKKASKND---DKKKDAKKITFSTDSESELESKESQKDEKKDKKDSKTDNK 434
Query: 201 SKIVSDEKDGRQEQRDINKXXXXXXXXXXXXPKYNEREIRRDPKESDRDLKRDSKTNE 374
+ +DE E D + PK + ++ ++D K+ +D K+D K +
Sbjct: 435 KSVKNDE-----ESTDADS-----------EPKGDSKKGKKDEKKGKKDSKKDDKKKD 476
Score = 33.9 bits (76), Expect = 1.3
Identities = 27/118 (22%), Positives = 53/118 (44%)
Frame = +3
Query: 900 SYETSRNTDKDAMKTGKKEMDSRNSKSEFDRDDRKPKSYRDIDARDSAGDRSQRLVDSKP 1079
S S+N K KK+ N+K D + D++D+ D S+++ +
Sbjct: 269 SQNNSKNYSLKYTKYTKKDTKK-NAKKSSDAESE--------DSKDAKKD-SKKVKKNVK 318
Query: 1080 RNERSEQQRKDNDSEKRFLKDSRSKLYESKDDRKDLKRKISEEKDNSMHTSNRQPSGD 1253
++++ + +KD +S DS+ + ++K D+K LK+ ++ S SGD
Sbjct: 319 KDDKKKDVKKDTESTDAESGDSKDERKDTKKDKKKLKKDDKKKDTKKYPESTDTESGD 376
Score = 31.2 bits (69), Expect = 8.4
Identities = 17/109 (15%), Positives = 50/109 (45%)
Frame = +3
Query: 48 REYNKKDYVNDSVKDLRKERENIRDSRDAGKESRAREHREPMKENKDIDRRSKIVSDEKD 227
R Y++ + N S+K + +++ + + ++ + + ++ K++K + + K +KD
Sbjct: 266 RNYSQNNSKNYSLKYTKYTKKDTKKNAKKSSDAESEDSKDAKKDSKKVKKNVKKDDKKKD 325
Query: 228 GRQEQRDINKXXXXXXXXXXXXPKYNEREIRRDPKESDRDLKRDSKTNE 374
+++ + + ++ R+D K+ + LK+D K +
Sbjct: 326 VKKDTESTDAESG------------DSKDERKDTKKDKKKLKKDDKKKD 362
>sp|P35662|CYL1_BOVIN Cylicin-1 (Cylicin I) (Multiple-band polypeptide I) Length = 667 Score = 55.8 bits (133), Expect = 3e-07 Identities = 45/216 (20%), Positives = 96/216 (44%), Gaps = 6/216 (2%) Frame = +3 Query: 660 KDIGREMRESENKRREMNKDRKESKAVDKEFQKDTRQVXXXXXXXXXXXXXXXXXXXNKS 839 KD + ++ + D K++K KE +KD ++ +K Sbjct: 315 KDTKKGAKKDTESTDAESGDSKDAKKGKKESKKDKKK------DAKKDAASDAESGDSKD 368 Query: 840 TNEFEREVTKDKGSDKFTRRSYETSRNTDKDAMKTGKKEMDSRNSKSEFDRDDRKPKSYR 1019 + ++ KD D + + + + +TD ++ + + DS+ K + +DD+K + + Sbjct: 369 AKKDSKKGKKDSKKDNKKKDAKKDAESTDAESGDSKDAKKDSKKGKKDSKKDDKKKDAKK 428 Query: 1020 DIDARDS-AGDRSQRLVDSK--PRNERSEQQRKD---NDSEKRFLKDSRSKLYESKDDRK 1181 D ++ D+ +GD DSK ++++ + +KD D++ D++ +SK D+K Sbjct: 429 DAESTDAESGDSKNAKKDSKKGKKDDKKKDAKKDAVSTDADSESEGDAKKSKKDSKKDKK 488 Query: 1182 DLKRKISEEKDNSMHTSNRQPSGDKQKLLLHSDTKK 1289 DLK K ++K + + D + + D+KK Sbjct: 489 DLK-KDDQKKPAMKSKESTETESDWESKKVKRDSKK 523
Score = 51.6 bits (122), Expect = 6e-06
Identities = 48/220 (21%), Positives = 91/220 (41%), Gaps = 2/220 (0%)
Frame = +3
Query: 645 ESDIKKDIGREMRESEN-KRREMNKDRK-ESKAVDKEFQKDTRQVXXXXXXXXXXXXXXX 818
+ D KKD + ++E+ ++ KD+K +K K +KDT
Sbjct: 284 KKDAKKDAKGKGSDAESVDSKDAKKDKKGATKDTKKGAKKDTESTDAESGD--------- 334
Query: 819 XXXXNKSTNEFEREVTKDKGSDKFTRRSYETSRNTDKDAMKTGKKEMDSRNSKSEFDRDD 998
+K + ++E KDK D + + KDA K DS+ K + +D+
Sbjct: 335 ----SKDAKKGKKESKKDKKKDAKKDAASDAESGDSKDAKK------DSKKGKKDSKKDN 384
Query: 999 RKPKSYRDIDARDSAGDRSQRLVDSKPRNERSEQQRKDNDSEKRFLKDSRSKLYESKDDR 1178
+K + +D ++ D+ S+ D+K +++ ++ K +D +K KD+ S ES D +
Sbjct: 385 KKKDAKKDAESTDAESGDSK---DAKKDSKKGKKDSKKDDKKKDAKKDAESTDAESGDSK 441
Query: 1179 KDLKRKISEEKDNSMHTSNRQPSGDKQKLLLHSDTKKRRE 1298
K +KD+ + + D KK ++
Sbjct: 442 NAKKDSKKGKKDDKKKDAKKDAVSTDADSESEGDAKKSKK 481
Score = 43.9 bits (102), Expect = 0.001
Identities = 40/194 (20%), Positives = 89/194 (45%), Gaps = 20/194 (10%)
Frame = +3
Query: 651 DIKKDI--GREMRESENKRREMNKDRK-------ESKAVDKEFQKDTRQVXXXXXXXXXX 803
D KKD G++ + +NK+++ KD + +SK K+ +K +
Sbjct: 368 DAKKDSKKGKKDSKKDNKKKDAKKDAESTDAESGDSKDAKKDSKKGKKDSKKDDKKKDAK 427
Query: 804 XXXXXXXXXNKSTNEFEREVTKDKGSDKFTRRSYETSRNTDKDAMKTG---KKEMDSRNS 974
+ + +++ K K DK + + + + +TD D+ G K + DS+
Sbjct: 428 KDAESTDAESGDSKNAKKDSKKGKKDDK-KKDAKKDAVSTDADSESEGDAKKSKKDSKKD 486
Query: 975 KSEFDRDDRKPKSYRDIDARDSAGDRSQRLV--DSKPRNERSEQQRKDND------SEKR 1130
K + +DD+K + + ++ ++ D + V DSK +++ ++ ++ S KR
Sbjct: 487 KKDLKKDDQKKPAMKSKESTETESDWESKKVKRDSKKDTKKTAKKATESSGAESDVSSKR 546
Query: 1131 FLKDSRSKLYESKD 1172
+LK ++++++S D
Sbjct: 547 YLK--KTEMFKSSD 558
Score = 41.2 bits (95), Expect = 0.008
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Frame = +3
Query: 30 KDSYKDREYNKKDYVNDS-VKDLRKERENI----RDSRDAGKESRAREHREPMKENKDID 194
KD+ KD + KKD D+ KD +K+ E+ DS+DA K+S+ + ++ K++K D
Sbjct: 367 KDAKKDSKKGKKDSKKDNKKKDAKKDAESTDAESGDSKDAKKDSK-KGKKDSKKDDKKKD 425
Query: 195 RRSKIVS------DEKDGRQEQRDINKXXXXXXXXXXXXPKYNEREIRRDPKESDRDLKR 356
+ S D K+ +++ + K + E D K+S +D K+
Sbjct: 426 AKKDAESTDAESGDSKNAKKDSKKGKKDDKKKDAKKDAVSTDADSESEGDAKKSKKDSKK 485
Query: 357 DSKTNEKE 380
D K +K+
Sbjct: 486 DKKDLKKD 493
Score = 40.0 bits (92), Expect = 0.018
Identities = 40/214 (18%), Positives = 75/214 (35%), Gaps = 2/214 (0%)
Frame = +3
Query: 657 KKDIGREMRESENKRREMNKDRKESKAVDKEFQKDTRQVXXXXXXXXXXXXXXXXXXXNK 836
K G ++ + + E N + K+S +V + QK ++ +
Sbjct: 174 KSSHGSQLSKKSKSKSETNPESKDSISVSIKHQKKEKRYSKDSKEMDFESTSTKKYSKSS 233
Query: 837 STNEFEREVTKDKGSDKFTRRSYETSRNTDKDAMKTGKKEMDSRNSKSEFDRDDRKPKSY 1016
N T K S + + + K NSK +D +K
Sbjct: 234 KNNSDAVSETCSKNSSNVGLMVHLGESDAESMEFDMWLKNYSQNNSKKPTKKDAKKDAKG 293
Query: 1017 RDIDAR--DSAGDRSQRLVDSKPRNERSEQQRKDNDSEKRFLKDSRSKLYESKDDRKDLK 1190
+ DA DS + + +K + +++ + D+E KD++ ESK D+K
Sbjct: 294 KGSDAESVDSKDAKKDKKGATKDTKKGAKKDTESTDAESGDSKDAKKGKKESKKDKKKDA 353
Query: 1191 RKISEEKDNSMHTSNRQPSGDKQKLLLHSDTKKR 1292
+K + S + + + K K D KK+
Sbjct: 354 KKDAASDAESGDSKDAKKDSKKGKKDSKKDNKKK 387
Score = 39.7 bits (91), Expect = 0.024
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 13/130 (10%)
Frame = +3
Query: 30 KDSYKDREYNKKD-YVNDSVKDLRKERENI----RDSRDAGKESRAREHREPMKENK--- 185
KD+ KD + KKD +D KD +K+ E+ DS++A K+S+ + + K+ K
Sbjct: 404 KDAKKDSKKGKKDSKKDDKKKDAKKDAESTDAESGDSKNAKKDSKKGKKDDKKKDAKKDA 463
Query: 186 -----DIDRRSKIVSDEKDGRQEQRDINKXXXXXXXXXXXXPKYNEREIRRDPKESDRDL 350
D + +KD +++++D+ K + E E + K+ RD
Sbjct: 464 VSTDADSESEGDAKKSKKDSKKDKKDLKK--DDQKKPAMKSKESTETESDWESKKVKRDS 521
Query: 351 KRDSKTNEKE 380
K+D+K K+
Sbjct: 522 KKDTKKTAKK 531
Score = 36.2 bits (82), Expect = 0.26
Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 3/120 (2%)
Frame = +3
Query: 30 KDSYKDREYNKKDYVNDSVKDLRKERENIRDSRDAG--KESRAREHREPMKENKDIDRRS 203
KD+ KD++ KD + KD DS+DA K+ ++ ++ K++ D S
Sbjct: 304 KDAKKDKKGATKDTKKGAKKDTESTDAESGDSKDAKKGKKESKKDKKKDAKKDAASDAES 363
Query: 204 KIVSD-EKDGRQEQRDINKXXXXXXXXXXXXPKYNEREIRRDPKESDRDLKRDSKTNEKE 380
D +KD ++ ++D K E +D K+ + K+DSK ++K+
Sbjct: 364 GDSKDAKKDSKKGKKDSKKDNKKKDAKKDAESTDAESGDSKDAKKDSKKGKKDSKKDDKK 423
>sp|Q8BZX4|SFR12_MOUSE Splicing factor, arginine/serine-rich 12 (Serine-arginine-rich splicing regulatory protein 86) (SRrp86) Length = 494 Score = 55.5 bits (132), Expect = 4e-07 Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 13/223 (5%) Frame = +3 Query: 627 DKIRVRESDIKKDIGREMRESENKRREMNKDRKESKAVDKEFQKDTRQVXXXXXXXXXXX 806 ++ R R+ D ++ + + +K RE K R S++ DK +KDTR+ Sbjct: 226 NRSRSRQKDRRRS--KSPHKKRSKSRERRKSRSRSRSRDK--RKDTRE------------ 269 Query: 807 XXXXXXXXNKSTNEFEREVTKDKGSDKFTRRSYETSRNTDKDAMKTGKKEMDSRNSK--- 977 + E ERE KD+ DK ++ + R +KD K KE + K Sbjct: 270 --KVKERVKEKEREKEREREKDREKDKERGKNKDKDREKEKDHEKERDKEKEKEQDKDKE 327 Query: 978 ------SEFDRDDRKPKSYRDIDARDSAGDRSQRLVDSKPRNERSEQQRKDNDSEKRFLK 1139 E D +K K R +A RS+ + R R S+ K Sbjct: 328 REKDRSKETDEKRKKEKKSRTPPRSYNASRRSRSTSRERRRRRSRSSSRSPRTSKTVKRK 387 Query: 1140 DSRSKLYESKDDRKDLKRK----ISEEKDNSMHTSNRQPSGDK 1256 SRS ++ ++ + K IS+ ++ TS ++ SGD+ Sbjct: 388 SSRSPSPRGRNKKEKKREKERDHISDRRERERSTSTKKSSGDR 430
Score = 38.9 bits (89), Expect = 0.040
Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 5/125 (4%)
Frame = +3
Query: 24 RRKDSYKDREYNK-----KDYVNDSVKDLRKERENIRDSRDAGKESRAREHREPMKENKD 188
R KD KD+E K ++ D K+ KE+E +D ++ R++E E K+ K
Sbjct: 286 REKDREKDKERGKNKDKDREKEKDHEKERDKEKEKEQDKDKEREKDRSKETDEKRKKEKK 345
Query: 189 IDRRSKIVSDEKDGRQEQRDINKXXXXXXXXXXXXPKYNEREIRRDPKESDRDLKRDSKT 368
+ + + R R+ + K +R+ R P R+ K +
Sbjct: 346 SRTPPRSYNASRRSRSTSRERRRRRSRSSSRSPRTSKTVKRKSSRSPSPRGRNKKEKKRE 405
Query: 369 NEKEH 383
E++H
Sbjct: 406 KERDH 410
Score = 37.4 bits (85), Expect = 0.12
Identities = 29/146 (19%), Positives = 64/146 (43%), Gaps = 1/146 (0%)
Frame = +3
Query: 864 TKDKGSDK-FTRRSYETSRNTDKDAMKTGKKEMDSRNSKSEFDRDDRKPKSYRDIDARDS 1040
+K + S K +RR S++ + ++ ++ D R SKS + + KS +R
Sbjct: 201 SKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKK---RSKSRERRKSRSR 257
Query: 1041 AGDRSQRLVDSKPRNERSEQQRKDNDSEKRFLKDSRSKLYESKDDRKDLKRKISEEKDNS 1220
+ R +R + ER +++ ++ + E+ KD K+ KD +++ EK+
Sbjct: 258 SRSRDKRKDTREKVKERVKEKEREKERERE--KDREKDKERGKNKDKDREKEKDHEKERD 315
Query: 1221 MHTSNRQPSGDKQKLLLHSDTKKRRE 1298
Q +++ +T ++R+
Sbjct: 316 KEKEKEQDKDKEREKDRSKETDEKRK 341
Score = 37.4 bits (85), Expect = 0.12
Identities = 31/118 (26%), Positives = 54/118 (45%)
Frame = +3
Query: 24 RRKDSYKDREYNKKDYVNDSVKDLRKERENIRDSRDAGKESRAREHREPMKENKDIDRRS 203
R + KDR +K + S R++ + SRD K++R + +E +KE + R
Sbjct: 227 RSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSRSRDKRKDTREKV-KERVKEKEREKERE 285
Query: 204 KIVSDEKDGRQEQRDINKXXXXXXXXXXXXPKYNEREIRRDPKESDRDLKRDSKTNEK 377
+ EKD ++R NK + E+E +D K+ +R+ R +T+EK
Sbjct: 286 REKDREKD---KERGKNKDKDREKEKDHEKERDKEKEKEQD-KDKEREKDRSKETDEK 339
Score = 34.7 bits (78), Expect = 0.76
Identities = 33/115 (28%), Positives = 52/115 (45%)
Frame = +3
Query: 24 RRKDSYKDREYNKKDYVNDSVKDLRKERENIRDSRDAGKESRAREHREPMKENKDIDRRS 203
RRK + R +K+ + VK+ KE+E ++ + + RE + +NKD DR
Sbjct: 251 RRKSRSRSRSRDKRKDTREKVKERVKEKEREKER----EREKDREKDKERGKNKDKDREK 306
Query: 204 KIVSDEKDGRQEQRDINKXXXXXXXXXXXXPKYNEREIRRDPKESDRDLKRDSKT 368
EKD +++RD K K ERE R KE+D K++ K+
Sbjct: 307 -----EKD-HEKERDKEK--------EKEQDKDKEREKDRS-KETDEKRKKEKKS 346
>sp|P54705|SNWA_DICDI Protein snwA Length = 685 Score = 55.1 bits (131), Expect = 5e-07 Identities = 46/206 (22%), Positives = 83/206 (40%), Gaps = 2/206 (0%) Frame = +3 Query: 630 KIRVRESDIKKDIGREMRESENKRREMNKDRKESKAVDKEFQKDTRQVXXXXXXXXXXXX 809 K+ +E + K+D+ R++ E R ++ ++ + + D Sbjct: 331 KLAQKEKERKQDMLRKLAEDVRNERSGIIQQRYTRKDNSDSDNDNDNDSSSDEDKNKRTP 390 Query: 810 XXXXXXXNKSTNEFEREVTKDKGSDKFTRRSYETSRNTDKDAMKTGKKEMDSRNSKSEFD 989 ++ST D D++ + +R D + + DSR+S+ D Sbjct: 391 PMNRRSRSRSTERIPSRNDNDDDDDRYRIKDNRDNRGRDNIDSRDNRDSRDSRDSRDSRD 450 Query: 990 -RDDRKPKSYRDI-DARDSAGDRSQRLVDSKPRNERSEQQRKDNDSEKRFLKDSRSKLYE 1163 RD R + RD D+RD+ +R R D +R ++R D+DS DS S + Sbjct: 451 SRDSRDSRDNRDSRDSRDNRDNRDNRRRDDSNDRDRYSKRRSDSDS------DSDSDSSD 504 Query: 1164 SKDDRKDLKRKISEEKDNSMHTSNRQ 1241 S+D+R +RK E+D R+ Sbjct: 505 SEDERVRRERKEKLERDKIRMEKKRE 530
Score = 42.4 bits (98), Expect = 0.004
Identities = 51/220 (23%), Positives = 95/220 (43%), Gaps = 1/220 (0%)
Frame = +3
Query: 639 VRESDIKKDIGREMRESENKRREMNKDRKESKAVDKEFQKDTRQVXXXXXXXXXXXXXXX 818
+ ES+ ++++ E E K + K+RK+ ++ +D R
Sbjct: 313 IAESNAREEVSARA-ELERKLAQKEKERKQDML--RKLAEDVRN-ERSGIIQQRYTRKDN 368
Query: 819 XXXXNKSTNEFEREVTKDKGSDKFTRRSYETSRNTDKDAMKTGKKEMDSRNSKSEFDRDD 998
N + N+ + K+K + RRS SR+T++ + + D R +D+
Sbjct: 369 SDSDNDNDNDSSSDEDKNKRTPPMNRRS--RSRSTERIPSRNDNDDDDDRYRI----KDN 422
Query: 999 RKPKSYRDIDARDSAGDRSQRLVDSKP-RNERSEQQRKDNDSEKRFLKDSRSKLYESKDD 1175
R + +ID+RD+ R R DS+ R+ R + +DN R +DSR +++D+
Sbjct: 423 RDNRGRDNIDSRDNRDSRDSR--DSRDSRDSRDSRDSRDN----RDSRDSR----DNRDN 472
Query: 1176 RKDLKRKISEEKDNSMHTSNRQPSGDKQKLLLHSDTKKRR 1295
R + +R S ++D S R+ D SD++ R
Sbjct: 473 RDNRRRDDSNDRD---RYSKRRSDSDSDSDSDSSDSEDER 509
Score = 32.3 bits (72), Expect = 3.8
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Frame = +3
Query: 12 HRDLRRKDSYKDREYNKKDYVNDSVKDLRKERENIRDSRDAGKESRAREHREPMKENKDI 191
+RD R +D+ R+ N +D R R++ RDSRD+ R+ R+ +
Sbjct: 422 NRDNRGRDNIDSRD-------NRDSRDSRDSRDS-RDSRDSRDSRDNRDSRDSRDNRDNR 473
Query: 192 DRRSKIVSDEKDGRQEQRDINKXXXXXXXXXXXXPKYNEREIRRDPKES-DRDLKRDSKT 368
D R + S+++D ++R + + +RR+ KE +RD R K
Sbjct: 474 DNRRRDDSNDRDRYSKRRSDSDSDSDSDSSDS-----EDERVRRERKEKLERDKIRMEKK 528
Query: 369 NEKE 380
E E
Sbjct: 529 RELE 532
>sp|Q5T200|K0853_HUMAN Protein KIAA0853 Length = 1668 Score = 53.9 bits (128), Expect = 1e-06 Identities = 45/226 (19%), Positives = 90/226 (39%), Gaps = 2/226 (0%) Frame = +3 Query: 627 DKIRVRESDIKKDIGREMRESENKRREMNKDRKESKAVDKEFQKDTRQVXXXXXXXXXXX 806 D+ R R+ + +++ RE K RE+ ++R + ++E ++D + Sbjct: 680 DRERERDRERERERERERDREREKERELERERAREREREREKERDRERDRDRDHDRERER 739 Query: 807 XXXXXXXXNKSTNEFEREVTKDKGSDKFTRRSYETSRNTDKDAMKTGKKEMDSRNSKSEF 986 + ERE +++ ++ R E R ++D + +++ + ++ Sbjct: 740 ERERDREKEREREREERERERERERERERERERERERARERDKERERQRDWEDKDK---- 795 Query: 987 DRDDRKPKSYRDIDARDSAGDRSQRLVDSKPRNERSEQQRKDNDSEKRFLKDSRSKLYES 1166 RDDR+ K + R+ +R + RNE S R+ + DS + Y S Sbjct: 796 GRDDRREKREEIREDRNPRDGHDERKSKKRYRNEGSPSPRQSPKRRREHSPDSDA--YNS 853 Query: 1167 KDDRKDLKRKISE--EKDNSMHTSNRQPSGDKQKLLLHSDTKKRRE 1298 DD+ + R +S+ S S + D+Q D K R+ Sbjct: 854 GDDKNEKHRLLSQVVRPQESRSLSPSHLTEDRQGRWKEEDRKPERK 899
Score = 49.3 bits (116), Expect = 3e-05
Identities = 48/222 (21%), Positives = 95/222 (42%), Gaps = 3/222 (1%)
Frame = +3
Query: 642 RESDIKKDIGREMRESE---NKRREMNKDRKESKAVDKEFQKDTRQVXXXXXXXXXXXXX 812
R ++++D RE R + ++R E ++R + D+E +++ +
Sbjct: 650 RNDELERDERREERRVDRVDDRRDERARERDRERERDRERERERER-------------- 695
Query: 813 XXXXXXNKSTNEFEREVTKDKGSDKFTRRSYETSRNTDKDAMKTGKKEMDSRNSKSEFDR 992
+ E ERE +++ ++ R E R+ D D + ++E D R + E +R
Sbjct: 696 -ERDREREKERELERERAREREREREKERDRERDRDRDHDRERERERERD-REKERERER 753
Query: 993 DDRKPKSYRDIDARDSAGDRSQRLVDSKPRNERSEQQRKDNDSEKRFLKDSRSKLYESKD 1172
++R+ + R+ R+ +R + ++ R++ E+QR D +K D R K E ++
Sbjct: 754 EERERERERE---RERERERERERERARERDKERERQRDWEDKDKG-RDDRREKREEIRE 809
Query: 1173 DRKDLKRKISEEKDNSMHTSNRQPSGDKQKLLLHSDTKKRRE 1298
DR + E K + + PS K+RRE
Sbjct: 810 DRNP-RDGHDERKSKKRYRNEGSPSP-------RQSPKRRRE 843
Score = 42.0 bits (97), Expect = 0.005
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 2/137 (1%)
Frame = +3
Query: 834 KSTNEFEREVTKDKGSDKFTRRSYETSRNTDKDAMKTGKKEMDSRNSKSEFDRDDRKPKS 1013
K ++ ER + D+ R +T D++ ++E + S S RDDR+P+
Sbjct: 398 KGRHDHERT---SQSHDRRHERREDTRGKRDREKDSREEREYEQDQSSSRDHRDDREPRD 454
Query: 1014 YRD-IDARDSAGDRSQRLVDSKPRNERSEQQRKDNDS-EKRFLKDSRSKLYESKDDRKDL 1187
RD DARD+ R R DS+ + E + D+ E R +DSRS D +D
Sbjct: 455 GRDRRDARDTRDRRELR--DSRDMRDSREMRDYSRDTKESRDPRDSRST--RDAHDYRDR 510
Query: 1188 KRKISEEKDNSMHTSNR 1238
+ + + K+++ +R
Sbjct: 511 EGRDTHRKEDTYPEESR 527
Score = 39.3 bits (90), Expect = 0.031
Identities = 32/126 (25%), Positives = 62/126 (49%)
Frame = +3
Query: 3 NDMHRDLRRKDSYKDREYNKKDYVNDSVKDLRKERENIRDSRDAGKESRAREHREPMKEN 182
+++ RD RR++ DR +++D + ++ +ERE R+ + R RE RE +E
Sbjct: 652 DELERDERREERRVDRVDDRRD---ERARERDRERERDRERERERERERDRE-REKEREL 707
Query: 183 KDIDRRSKIVSDEKDGRQEQRDINKXXXXXXXXXXXXPKYNEREIRRDPKESDRDLKRDS 362
+ R + EK+ R +RD ++ + ERE R+ +E +R+ +R+
Sbjct: 708 ERERAREREREREKE-RDRERDRDRDHDRERERERERDREKEREREREERERERERERE- 765
Query: 363 KTNEKE 380
+ E+E
Sbjct: 766 RERERE 771
Score = 36.2 bits (82), Expect = 0.26
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 16/94 (17%)
Frame = +3
Query: 24 RRKDSYKDREYNK-----KDYVND----------SVKDLRKERENIRDSRDAGKESRARE 158
R KDS ++REY + +D+ +D +D R RE +RDSRD R+
Sbjct: 426 REKDSREEREYEQDQSSSRDHRDDREPRDGRDRRDARDTRDRRE-LRDSRDMRDSREMRD 484
Query: 159 HREPMKENKDIDRRSKIVSDEKDGR-QEQRDINK 257
+ KE++D R S+ D D R +E RD ++
Sbjct: 485 YSRDTKESRD-PRDSRSTRDAHDYRDREGRDTHR 517
Score = 36.2 bits (82), Expect = 0.26
Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 10/132 (7%)
Frame = +3
Query: 15 RDLRRKDSYKDREYNKKDYVNDSVKDLRKERENIRDSRDAGKESRAREH-------REPM 173
RD R +D + ++ +D R+E + D D ++ RARE RE
Sbjct: 632 RDNRERDQRPSSPIRHQGRNDELERDERREERRV-DRVDDRRDERARERDRERERDRERE 690
Query: 174 KE---NKDIDRRSKIVSDEKDGRQEQRDINKXXXXXXXXXXXXPKYNEREIRRDPKESDR 344
+E +D +R + + + R+ +R+ K + ERE RD +E +R
Sbjct: 691 RERERERDREREKERELERERAREREREREKERDRERDRDRDHDRERERERERD-REKER 749
Query: 345 DLKRDSKTNEKE 380
+ +R+ + E+E
Sbjct: 750 EREREERERERE 761
Score = 36.2 bits (82), Expect = 0.26
Identities = 27/120 (22%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
Frame = +3
Query: 24 RRKDSYKDREYNKKDYVNDSVKDLRKERENIRDSRDAGKESRAREHREPMKENKDIDRRS 203
R ++ +DRE K+ + ++ +ERE R+ + R R+H + ++ DR
Sbjct: 691 RERERERDREREKE---RELERERAREREREREKERDRERDRDRDHDRERERERERDREK 747
Query: 204 KIVSD-EKDGRQEQRDINKXXXXXXXXXXXXPKYNEREIRRDPKESDRDLKRDSKTNEKE 380
+ + E+ R+ +R+ + + ERE +RD D+D RD + ++E
Sbjct: 748 EREREREERERERERERERERERERERERARERDKERERQRD--WEDKDKGRDDRREKRE 805
Score = 34.7 bits (78), Expect = 0.76
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Frame = +3
Query: 855 REVTKDKGSDKFTRRSYETSRNTDKDAMKTGKK--EMDSRNSKSEFDRDDRKPKSYRDI- 1025
R ++KG R S R ++ GK+ E DSR + E+++D + +RD
Sbjct: 392 RSPMREKGRHDHERTSQSHDRRHERREDTRGKRDREKDSREER-EYEQDQSSSRDHRDDR 450
Query: 1026 DARDSAGDRSQRLVDSKPRNE-RSEQQRKDNDSEKRFLKDSRSKLYESKDDR 1178
+ RD R R D++ R E R + +D+ + + +D++ ES+D R
Sbjct: 451 EPRDGRDRRDAR--DTRDRRELRDSRDMRDSREMRDYSRDTK----ESRDPR 496
Score = 34.7 bits (78), Expect = 0.76
Identities = 43/196 (21%), Positives = 77/196 (39%), Gaps = 18/196 (9%)
Frame = +3
Query: 660 KDIGREMRESENKRREMNKDRKESKAVDKEFQKDTRQVXXXXXXXXXXXXXXXXXXXNKS 839
++ GR E ++ + +R+E ++ +KD+R+
Sbjct: 396 REKGRHDHERTSQSHDRRHERREDTRGKRDREKDSRE----------------------- 432
Query: 840 TNEFEREVTKDKGSDKFTR--------RSYETSRNT-DKDAMKTGKKEMDSRNSK----- 977
ERE +D+ S + R R +R+T D+ ++ + DSR +
Sbjct: 433 ----EREYEQDQSSSRDHRDDREPRDGRDRRDARDTRDRRELRDSRDMRDSREMRDYSRD 488
Query: 978 SEFDRDDRKPKSYRDI-DARDSAGDRSQRLVDSKPRNERS--EQQRKDNDSEKRFLKDSR 1148
++ RD R +S RD D RD G + R D+ P RS ++ S +SR
Sbjct: 489 TKESRDPRDSRSTRDAHDYRDREGRDTHRKEDTYPEESRSYGRNHLREESSRTEIRNESR 548
Query: 1149 SK-LYESKDDRKDLKR 1193
++ E ++DR R
Sbjct: 549 NESRSEIRNDRMGRSR 564
Score = 34.7 bits (78), Expect = 0.76
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 10/136 (7%)
Frame = +3
Query: 3 NDMHRDLRRKDSYKDR----EYNKKDYVNDSVKDLRKERENIRDSRDAGKE-SRAREHR- 164
++ H + SY +R E + +D DS + R + RD+R+ + S H+
Sbjct: 590 SNYHDSWETRSSYPERDRYPERDNRDQARDSSFERRHGERDRRDNRERDQRPSSPIRHQG 649
Query: 165 ---EPMKENKDIDRRSKIVSDEKDGRQEQRDINKXXXXXXXXXXXXPKYNEREIRRD-PK 332
E ++ + +RR V D +D R +RD + + ERE RD +
Sbjct: 650 RNDELERDERREERRVDRVDDRRDERARERDRER--------ERDRERERERERERDRER 701
Query: 333 ESDRDLKRDSKTNEKE 380
E +R+L+R+ + E+E
Sbjct: 702 EKERELERE-RARERE 716
Score = 34.7 bits (78), Expect = 0.76
Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 9/127 (7%)
Frame = +3
Query: 24 RRKDSYKDREYNKKDYVNDSVKDLRKERENIRDSRDAGKESRAREHREPMKENKDIDRRS 203
R +D K+RE +++ + ++ +ERE R+ RARE + + +D + +
Sbjct: 741 RERDREKEREREREERERERERERERERERERE------RERARERDKERERQRDWEDKD 794
Query: 204 KIVSDEKDGRQEQR---------DINKXXXXXXXXXXXXPKYNEREIRRDPKESDRDLKR 356
K D ++ R+E R D K P+ + + R +SD
Sbjct: 795 KGRDDRREKREEIREDRNPRDGHDERKSKKRYRNEGSPSPRQSPKRRREHSPDSDAYNSG 854
Query: 357 DSKTNEK 377
D K NEK
Sbjct: 855 DDK-NEK 860
Score = 32.3 bits (72), Expect = 3.8
Identities = 43/219 (19%), Positives = 78/219 (35%), Gaps = 26/219 (11%)
Frame = +3
Query: 636 RVRESDIKKDIGREMRESENKRREMNKDRKESKAVDKEFQKDTR---QVXXXXXXXXXXX 806
R RE D +++ RE + ++ R+ DR+ D+ +DTR ++
Sbjct: 424 RDREKDSREE--REYEQDQSSSRDHRDDREPRDGRDRRDARDTRDRRELRDSRDMRDSRE 481
Query: 807 XXXXXXXXNKSTNEFEREVTKD-------------KGSDKFTRRSYETSRNTDKDAMKTG 947
+S + + T+D + D + S RN ++
Sbjct: 482 MRDYSRDTKESRDPRDSRSTRDAHDYRDREGRDTHRKEDTYPEESRSYGRNHLREESSRT 541
Query: 948 KKEMDSRNSKSEFDRDDRKPKSYRDIDARDSAGDRSQR--LVDSKPRNE--------RSE 1097
+ +SRN R+DR +S + G R R +DS N RS
Sbjct: 542 EIRNESRNESRSEIRNDRMGRSRGRVPELPEKGSRGSRGSQIDSHSSNSNYHDSWETRSS 601
Query: 1098 QQRKDNDSEKRFLKDSRSKLYESKDDRKDLKRKISEEKD 1214
+D E+ +R +E + +D R+ + E+D
Sbjct: 602 YPERDRYPERDNRDQARDSSFERRHGERD--RRDNRERD 638
>sp|Q9JKL7|SFR12_RAT Splicing factor, arginine/serine-rich 12 (Serine-arginine-rich splicing regulatory protein 86) (SRrp86) (SR-related protein of 86 kDa) Length = 494 Score = 51.6 bits (122), Expect = 6e-06 Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 3/198 (1%) Frame = +3 Query: 636 RVRESDIKKDIGREMRESENKR-REMNKDRKESKAVDKEFQKDTRQVXXXXXXXXXXXXX 812 R R D +KD +++E +R RE K+R++ + DKE K+ + Sbjct: 257 RSRSRDKRKDTREKVKERVKEREREKEKEREKEREKDKERGKNKDK-------------- 302 Query: 813 XXXXXXNKSTNEFEREVTKDKGSDKFTRRSYETSRNTDKDAMKTGKKEMDSRNSKSEFDR 992 + +E ER+ K+K DK R + S+ D+ KKE SR ++ Sbjct: 303 ---DREKEKDHEKERDKEKEKEQDKDKEREKDRSKEADEKR----KKEKKSRTPPRSYNS 355 Query: 993 DDRKPKSYRDIDARDS-AGDRSQRLVDS-KPRNERSEQQRKDNDSEKRFLKDSRSKLYES 1166 R + R+ R S + RS R + K ++ RS R N EK+ R K + Sbjct: 356 SRRSRSASRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRGRNKKEKK-----REKERDH 410 Query: 1167 KDDRKDLKRKISEEKDNS 1220 DR++ +R S +K +S Sbjct: 411 ISDRRERERSTSTKKSSS 428
Score = 48.9 bits (115), Expect = 4e-05
Identities = 49/219 (22%), Positives = 87/219 (39%), Gaps = 9/219 (4%)
Frame = +3
Query: 627 DKIRVRESDIKKDIGREMRESENKRREMNKDRKESKAVDKEFQKDTRQVXXXXXXXXXXX 806
++ R R+ D + + + +K RE K R S++ DK +KDTR+
Sbjct: 226 NRSRSRQKDRARS--KSPHKKRSKSRERRKSRSRSRSRDK--RKDTRE----------KV 271
Query: 807 XXXXXXXXNKSTNEFEREVTKDKGSDKFTRRSYETSRNTDKDAMKTGKKEMD-----SRN 971
+ E E+E KDK K + E ++ +K+ K +KE D ++
Sbjct: 272 KERVKEREREKEKEREKEREKDKERGKNKDKDREKEKDHEKERDKEKEKEQDKDKEREKD 331
Query: 972 SKSEFDRDDRKPKSYRDIDARDSAGDRSQRLVDSKPRNERSEQQRKDNDSEKRFLKDSRS 1151
E D +K K R ++ RS+ + R R S+ K SRS
Sbjct: 332 RSKEADEKRKKEKKSRTPPRSYNSSRRSRSASRERRRRRSRSSSRSPRTSKTIKRKSSRS 391
Query: 1152 KLYESKDDRKDLKRK----ISEEKDNSMHTSNRQPSGDK 1256
++ ++ + K IS+ ++ TS ++ S D+
Sbjct: 392 PSPRGRNKKEKKREKERDHISDRRERERSTSTKKSSSDR 430
Score = 38.1 bits (87), Expect = 0.069
Identities = 28/120 (23%), Positives = 48/120 (40%)
Frame = +3
Query: 24 RRKDSYKDREYNKKDYVNDSVKDLRKERENIRDSRDAGKESRAREHREPMKENKDIDRRS 203
R K+ KDRE K D K+ KE+E +D ++ R++E E K+ K
Sbjct: 296 RGKNKDKDREKEK-----DHEKERDKEKEKEQDKDKEREKDRSKEADEKRKKEKKSRTPP 350
Query: 204 KIVSDEKDGRQEQRDINKXXXXXXXXXXXXPKYNEREIRRDPKESDRDLKRDSKTNEKEH 383
+ + + R R+ + K +R+ R P R+ K + E++H
Sbjct: 351 RSYNSSRRSRSASRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRGRNKKEKKREKERDH 410
Score = 37.4 bits (85), Expect = 0.12
Identities = 30/156 (19%), Positives = 71/156 (45%)
Frame = +3
Query: 831 NKSTNEFEREVTKDKGSDKFTRRSYETSRNTDKDAMKTGKKEMDSRNSKSEFDRDDRKPK 1010
+KS + + + + K RS+ SR+ KD ++ K + SKS R+ RK +
Sbjct: 201 SKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRARS--KSPHKKRSKS---RERRKSR 255
Query: 1011 SYRDIDARDSAGDRSQRLVDSKPRNERSEQQRKDNDSEKRFLKDSRSKLYESKDDRKDLK 1190
S +RD D +++ ER +++ ++ + E+ ++ + ++KD ++ +
Sbjct: 256 SRSR--SRDKRKDTREKV------KERVKEREREKEKEREKEREKDKERGKNKDKDREKE 307
Query: 1191 RKISEEKDNSMHTSNRQPSGDKQKLLLHSDTKKRRE 1298
+ +E+D + ++ +D K+++E
Sbjct: 308 KDHEKERDKEKEKEQDKDKEREKDRSKEADEKRKKE 343
Score = 36.6 bits (83), Expect = 0.20
Identities = 34/115 (29%), Positives = 52/115 (45%)
Frame = +3
Query: 24 RRKDSYKDREYNKKDYVNDSVKDLRKERENIRDSRDAGKESRAREHREPMKENKDIDRRS 203
RRK + R +K+ + VK+ KERE ++ + + RE + +NKD DR
Sbjct: 251 RRKSRSRSRSRDKRKDTREKVKERVKEREREKEK----EREKEREKDKERGKNKDKDREK 306
Query: 204 KIVSDEKDGRQEQRDINKXXXXXXXXXXXXPKYNEREIRRDPKESDRDLKRDSKT 368
EKD +++RD K K ERE R KE+D K++ K+
Sbjct: 307 -----EKD-HEKERDKEK--------EKEQDKDKEREKDRS-KEADEKRKKEKKS 346
>sp|P49756|RBM25_HUMAN Probable RNA-binding protein 25 (RNA-binding motif protein 25) (RNA-binding region containing protein 7) (Protein S164) Length = 784 Score = 51.2 bits (121), Expect = 8e-06 Identities = 38/190 (20%), Positives = 82/190 (43%), Gaps = 3/190 (1%) Frame = +3 Query: 651 DIKKDIGREMRESENKRREMNKDRKESKAVDKEFQKDTRQVXXXXXXXXXXXXXXXXXXX 830 D K + E + E +R+E+ K+R+E + ++E +++ R+ Sbjct: 227 DTHKKLEEEKGKKEKERQEIEKERRERER-ERERERERRE-------------------- 265 Query: 831 NKSTNEFEREVTKDKGSDKFTRRSYETSRNTDKDAMKTGKKEMDSRNSKSEFDRDDRKPK 1010 + E ERE K+K ++ R + R ++D + +++ D +S DR Sbjct: 266 REREREREREREKEKERERERERDRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRS 325 Query: 1011 SYRDIDARDSAGDRSQRLVDSKPRNERSEQQRKDNDSEKRFLKDSRSKLYESKDD---RK 1181 + D +R + + ER ++ ++ + E+ KD + E ++D R+ Sbjct: 326 REKSRDREREREREREREREREREREREREREREREREREREKDKKRDREEDEEDAYERR 385 Query: 1182 DLKRKISEEK 1211 L+RK+ E++ Sbjct: 386 KLERKLREKE 395
Score = 47.4 bits (111), Expect = 1e-04
Identities = 40/228 (17%), Positives = 94/228 (41%), Gaps = 15/228 (6%)
Frame = +3
Query: 627 DKIRVRESDIKKDIGREMRESENKRREMNKDRKESKAVDKEFQKDTRQVXXXXXXXXXXX 806
++ R +E + +++ R+ K R+ ++DR+ + D+E D +
Sbjct: 273 EREREKEKERERERERDRDRDRTKERDRDRDRERDRDRDRERSSDRNK------------ 320
Query: 807 XXXXXXXXNKSTNEFEREVTKDKGSDKFTRRSYETSRNTDKDAMKTGKKEMDSRNSKSEF 986
+ + + ERE +++ ++ R E R +++ + ++E D + + E
Sbjct: 321 ---DRSRSREKSRDREREREREREREREREREREREREREREREREREREKDKKRDREE- 376
Query: 987 DRDDRKPKSYRDIDARDSAGDRSQRLVDSKPRN-----------ERSEQQRKDNDSEKRF 1133
D +D + + R+ +RL + + R ER E++R++ E +
Sbjct: 377 DEEDAYERRKLERKLREKEAAYQERLKNWEIRERKKTREYEKEAEREEERRREMAKEAKR 436
Query: 1134 LKDSRSKLYESKDDRKDLK----RKISEEKDNSMHTSNRQPSGDKQKL 1265
LK+ + +DD K + +K +++ M R +K++L
Sbjct: 437 LKEFLEDYDDDRDDPKYYRGSALQKRLRDREKEMEADERDRKREKEEL 484
Score = 43.5 bits (101), Expect = 0.002
Identities = 47/226 (20%), Positives = 86/226 (38%), Gaps = 2/226 (0%)
Frame = +3
Query: 627 DKIRVRESDIKKDIGREMRESENKRREMNKDRKESKAVDKEFQKDTRQVXXXXXXXXXXX 806
++ R RE + +++ RE + RE KD+K + D+E + R++
Sbjct: 339 EREREREREREREREREREREREREREREKDKKRDREEDEEDAYERRKL-------ERKL 391
Query: 807 XXXXXXXXNKSTNEFEREVTKDKGSDKFTRRSYETSRNTDKDAMKTGKKEMDSRNSKSEF 986
+ N RE K + +K R E R K+A + + ++
Sbjct: 392 REKEAAYQERLKNWEIRERKKTREYEKEAEREEERRREMAKEAKRL-------KEFLEDY 444
Query: 987 DRDDRKPKSYRDIDARDSAGDRSQRLVDSKPRNERSEQQRKDNDSEKRFLKDSRSKLYES 1166
D D PK YR G Q+ + + R + E +D EK L++ R +L
Sbjct: 445 DDDRDDPKYYR--------GSALQKRL--RDREKEMEADERDRKREKEELEEIRQRLLAE 494
Query: 1167 --KDDRKDLKRKISEEKDNSMHTSNRQPSGDKQKLLLHSDTKKRRE 1298
D +L+R E + ++P ++++ +KR E
Sbjct: 495 GHPDPDAELQRMEQEAERRRQPQIKQEPESEEEEEEKQEKEEKREE 540
Score = 41.2 bits (95), Expect = 0.008
Identities = 31/135 (22%), Positives = 60/135 (44%), Gaps = 10/135 (7%)
Frame = +3
Query: 6 DMHRDLRRKDSYKDREYNKKDYVNDSVKDLRKERENIRD-----SRDAGKESRAREHREP 170
+ R R ++ ++RE +++ + ++ KE+E R+ RD KE R R+
Sbjct: 247 EKERRERERERERERERREREREREREREREKEKERERERERDRDRDRTKE-RDRDRDRE 305
Query: 171 MKENKDIDRRSKIVSDEKDGRQEQRDINKXXXXXXXXXXXXPKYNEREIRRD-----PKE 335
++D +R S D R++ RD + + ERE R+ +E
Sbjct: 306 RDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERERERERERERE 365
Query: 336 SDRDLKRDSKTNEKE 380
++D KRD + +E++
Sbjct: 366 REKDKKRDREEDEED 380
Score = 35.4 bits (80), Expect = 0.45
Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Frame = +3
Query: 30 KDSYK--DREYNKKDYVNDSVKDLRKERENIRDSRDAGKESRAREHREPMKENKDIDRRS 203
+D++K + E KK+ ++ R+ERE R+ R+ + R RE + K+ +R
Sbjct: 226 RDTHKKLEEEKGKKEKERQEIEKERRERERERE-RERERREREREREREREREKEKERER 284
Query: 204 KIVSDEKDGRQEQRDINKXXXXXXXXXXXXPKYNEREIRRDPKESDRDLKRDSKTNEK 377
+ D R ++RD ++ ER+ RD + S K S++ EK
Sbjct: 285 ERERDRDRDRTKERDRDRD--------------RERDRDRDRERSSDRNKDRSRSREK 328
Score = 34.7 bits (78), Expect = 0.76
Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 1/121 (0%)
Frame = +3
Query: 6 DMHRDLRRK-DSYKDREYNKKDYVNDSVKDLRKERENIRDSRDAGKESRAREHREPMKEN 182
D RD R D KDR ++ D ++ +ERE R+ + R RE +
Sbjct: 307 DRDRDRERSSDRNKDRS-RSREKSRDRERERERERERERERERERERERERERERERERE 365
Query: 183 KDIDRRSKIVSDEKDGRQEQRDINKXXXXXXXXXXXXPKYNEREIRRDPKESDRDLKRDS 362
++ D++ DE+D + ++ K + RE R+ +E +++ +R+
Sbjct: 366 REKDKKRDREEDEEDAYERRKLERKLREKEAAYQERLKNWEIRE-RKKTREYEKEAEREE 424
Query: 363 K 365
+
Sbjct: 425 E 425
>sp|O01159|RSP7_CAEEL Probable splicing factor, arginine/serine-rich 7 (p54) Length = 452 Score = 50.8 bits (120), Expect = 1e-05 Identities = 42/133 (31%), Positives = 70/133 (52%), Gaps = 2/133 (1%) Frame = +3 Query: 867 KDKGSDKFTRRSYET-SRNTDKDAMKTGKKEMDSRNSKSEFDRDDRKPKSYRDIDARDSA 1043 +D+ D+ RRS + SR+ D+D ++ D + S+S RD ++ RD RD Sbjct: 295 RDRDRDRDRRRSRDRRSRSRDRD------RDRDRKRSRS---RDRKRRSRSRDNKDRDRK 345 Query: 1044 GDRSQ-RLVDSKPRNERSEQQRKDNDSEKRFLKDSRSKLYESKDDRKDLKRKISEEKDNS 1220 RS+ R SK R+ + E+ R + KR K SRS+ E + D++D K +E+K+N Sbjct: 346 RSRSRDRRRRSKSRDRKRERSRSRSKDRKRDKKRSRSRSPEKRRDKEDRK---TEKKENE 402 Query: 1221 MHTSNRQPSGDKQ 1259 +S R+ +K+ Sbjct: 403 NESSLREKLLEKK 415
Score = 45.4 bits (106), Expect = 4e-04
Identities = 34/144 (23%), Positives = 65/144 (45%), Gaps = 1/144 (0%)
Frame = +3
Query: 834 KSTNEFEREVTKDKGSDKFTRRSYETSRNTDKDAMKTGKKEMDSRNSKSEFDRDDRKPKS 1013
++ E E + + D RR SR+ + + ++ DSR+ + DRD R+ +
Sbjct: 252 QALGEIEEAIRMGRNGDDRDRRR---SRSPRRRRSPSPRRRRDSRDRDRDRDRDRRRSRD 308
Query: 1014 YRDIDARDSAGDRSQRLVDSKPRNERSEQQRKDNDSEKRFLKDSRSKLYESKDDRKDLKR 1193
R +RD DR ++ S+ R RS + + KR R + +S+D +++ R
Sbjct: 309 RRS-RSRDRDRDRDRKRSRSRDRKRRSRSRDNKDRDRKRSRSRDRRRRSKSRDRKRERSR 367
Query: 1194 KISEE-KDNSMHTSNRQPSGDKQK 1262
S++ K + + +R P + K
Sbjct: 368 SRSKDRKRDKKRSRSRSPEKRRDK 391
Score = 45.4 bits (106), Expect = 4e-04
Identities = 33/123 (26%), Positives = 55/123 (44%)
Frame = +3
Query: 927 KDAMKTGKKEMDSRNSKSEFDRDDRKPKSYRDIDARDSAGDRSQRLVDSKPRNERSEQQR 1106
++A++ G+ D +S R R P R D+RD DR + S+ R RS +
Sbjct: 258 EEAIRMGRNGDDRDRRRSRSPRRRRSPSPRRRRDSRDRDRDRDRDRRRSRDRRSRSRDRD 317
Query: 1107 KDNDSEKRFLKDSRSKLYESKDDRKDLKRKISEEKDNSMHTSNRQPSGDKQKLLLHSDTK 1286
+D D ++ +D + + D KD RK S +D R S D+++ S +K
Sbjct: 318 RDRDRKRSRSRDRKRR--SRSRDNKDRDRKRSRSRDR----RRRSKSRDRKRERSRSRSK 371
Query: 1287 KRR 1295
R+
Sbjct: 372 DRK 374
Score = 44.7 bits (104), Expect = 7e-04
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Frame = +3
Query: 897 RSYETSRNTDKDAMKTGKKEMDSRNSKSEFDRD-DRKPKSYRDIDARDSAGDRSQRLVDS 1073
R SR+ D+D + ++ D R+ + DRD DRK RD R + D R
Sbjct: 287 RRRRDSRDRDRDRDRDRRRSRDRRSRSRDRDRDRDRKRSRSRDRKRRSRSRDNKDR---- 342
Query: 1074 KPRNERSEQQRKDNDSEKRFLKDSRSKLYESKDDRKDLKRKISEEKDNSMHTSNRQ 1241
+ RS +R+ + S R + SRS+ SKD ++D KR S + +R+
Sbjct: 343 DRKRSRSRDRRRRSKSRDRKRERSRSR---SKDRKRDKKRSRSRSPEKRRDKEDRK 395
Score = 44.3 bits (103), Expect = 0.001
Identities = 45/186 (24%), Positives = 69/186 (37%), Gaps = 6/186 (3%)
Frame = +3
Query: 672 REMRESENKRREMNKDRKESKAVDKEFQKDTRQVXXXXXXXXXXXXXXXXXXXNKSTNEF 851
R R +RR ++DR + D+ +D
Sbjct: 279 RRRRSPSPRRRRDSRDRDRDRDRDRRRSRD------------------------------ 308
Query: 852 EREVTKDKGSDKFTRRSYETSRNTDKDAMKTGKKEMDSRNSKSEFDRDDRKPKSYRDIDA 1031
R ++D+ D+ +RS SR+ + + K+ D + S+S RD R+ RD
Sbjct: 309 RRSRSRDRDRDRDRKRS--RSRDRKRRSRSRDNKDRDRKRSRS---RDRRRRSKSRDRKR 363
Query: 1032 RDSAGDRSQRLVDSKPRNERSEQQRKDNDSEKRFLKDS------RSKLYESKDDRKDLKR 1193
S R D K RS ++R+D + K K++ R KL E K RKD
Sbjct: 364 ERSRSRSKDRKRDKKRSRSRSPEKRRDKEDRKTEKKENENESSLREKLLEKKAARKDSSD 423
Query: 1194 KISEEK 1211
EEK
Sbjct: 424 DEWEEK 429
Score = 32.7 bits (73), Expect = 2.9
Identities = 35/140 (25%), Positives = 49/140 (35%), Gaps = 14/140 (10%)
Frame = +3
Query: 3 NDMHRDLRRKDSYKDREYNKKDYVNDSVKDLRKERENIRDSRDAGKESRARE-------- 158
N RD RR S + R DS R + R SRD SR R+
Sbjct: 266 NGDDRDRRRSRSPRRRRSPSPRRRRDSRDRDRDRDRDRRRSRDRRSRSRDRDRDRDRKRS 325
Query: 159 ------HREPMKENKDIDRRSKIVSDEKDGRQEQRDINKXXXXXXXXXXXXPKYNEREIR 320
R ++NKD DR+ + S ++ R + RD + K R
Sbjct: 326 RSRDRKRRSRSRDNKDRDRK-RSRSRDRRRRSKSRDRKRERSRSRSKDRKRDKKRSRSRS 384
Query: 321 RDPKESDRDLKRDSKTNEKE 380
+ + D K + K NE E
Sbjct: 385 PEKRRDKEDRKTEKKENENE 404
>sp|Q9U7E0|ATRX_CAEEL Transcriptional regulator ATRX homolog (X-linked nuclear protein 1) Length = 1359 Score = 50.4 bits (119), Expect = 1e-05 Identities = 48/220 (21%), Positives = 96/220 (43%), Gaps = 8/220 (3%) Frame = +3 Query: 657 KKDIGREMRESENKRREMNKDRKESKAVDKEFQKDTRQVXXXXXXXXXXXXXXXXXXXNK 836 KK R ESE+ + +DRK+SK+ K QK + + Sbjct: 80 KKSRKRAKSESESDESDEEEDRKKSKSKKKVDQKKKEK-----------------SKKKR 122 Query: 837 STNEFEREVTKDKGSDKFTRRSYETSRNTDKDAMKTGKKEMDSRNSKSEFDRDDRK-PKS 1013 +T+ E E + ++ K ++S +T + T ++ + ++E + SK ++ +K ++ Sbjct: 123 TTSSSEDEDSDEEREQKSKKKSKKTKKQTSSESSEESEEERKVKKSKKNKEKSVKKRAET 182 Query: 1014 YRDIDARDSAGDRSQRLVDSKPRNERSEQQRKDNDSEKRFLKDSRS---KLYESKDD--- 1175 + D + +S++ + K ++E SE + +D K+ K S+ K ES+D+ Sbjct: 183 SEESDEDEKPSKKSKKGLKKKAKSE-SESESEDEKEVKKSKKKSKKVVKKESESEDEAPE 241 Query: 1176 -RKDLKRKISEEKDNSMHTSNRQPSGDKQKLLLHSDTKKR 1292 +K KRK S+ S + +++K KK+ Sbjct: 242 KKKTEKRKRSKTSSEESSESEKSDEEEEEKESSPKPKKKK 281
Score = 42.4 bits (98), Expect = 0.004
Identities = 41/229 (17%), Positives = 95/229 (41%), Gaps = 11/229 (4%)
Frame = +3
Query: 645 ESDIKKDIGREMRESENKRREMNKDRKESKAVDKEFQKDTRQVXXXXXXXXXXXXXXXXX 824
ES + + R++++S+ + + K R E+ E +K +++
Sbjct: 154 ESSEESEEERKVKKSKKNKEKSVKKRAETSEESDEDEKPSKK--------SKKGLKKKAK 205
Query: 825 XXNKSTNEFEREVTKDKGSDKFTRRSYETSRNTDKDAMKTGKK-------EMDSRNSKSE 983
++S +E E+EV K K K + S + + KT K+ E S + KS+
Sbjct: 206 SESESESEDEKEVKKSKKKSKKVVKKESESEDEAPEKKKTEKRKRSKTSSEESSESEKSD 265
Query: 984 FDRDDR----KPKSYRDIDARDSAGDRSQRLVDSKPRNERSEQQRKDNDSEKRFLKDSRS 1151
+ +++ KPK + + + + D D + ++ ++ S+ KD +S
Sbjct: 266 EEEEEKESSPKPKKKKPLAVKKLSSDEESEESDVEVLPQKKKRGAVTLISDSEDEKDQKS 325
Query: 1152 KLYESKDDRKDLKRKISEEKDNSMHTSNRQPSGDKQKLLLHSDTKKRRE 1298
+ + D++ K+S++K +S + + ++ +KK+ +
Sbjct: 326 E-----SEASDVEEKVSKKKAKKQESSESGSDSSEGSITVNRKSKKKEK 369
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,316,354
Number of Sequences: 369166
Number of extensions: 1982918
Number of successful extensions: 10486
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9900
length of database: 68,354,980
effective HSP length: 115
effective length of database: 47,110,455
effective search space used: 18561519270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Cluster detail
