Planaria EST Database

DrC_00706

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00706
         (1520 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9HCC0|MCCC2_HUMAN  Methylcrotonoyl-CoA carboxylase beta ...   430   e-120
sp|Q9V9A7|PCCB_DROME  Putative propionyl-CoA carboxylase bet...   404   e-112
sp|P34385|YLPC_CAEEL  Hypothetical protein F02A9.4a in chrom...   394   e-109
sp|Q9LDD8|MCCB_ARATH  Methylcrotonoyl-CoA carboxylase beta c...   321   4e-87
sp|Q8GBW6|12S_PROFR  Methylmalonyl-CoA carboxyltransferase 1...   150   1e-35
sp|P53003|PCCB_SACER  Propionyl-CoA carboxylase beta chain (...   123   2e-27
sp|P05166|PCCB_HUMAN  Propionyl-CoA carboxylase beta chain, ...   122   2e-27
sp|P07633|PCCB_RAT  Propionyl-CoA carboxylase beta chain, mi...   122   4e-27
sp|P96885|PCC5_MYCTU  Probable propionyl-CoA carboxylase bet...   121   6e-27
sp|Q99MN9|PCCB_MOUSE  Propionyl-CoA carboxylase beta chain, ...   121   6e-27

>sp|Q9HCC0|MCCC2_HUMAN Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial precursor
            (3-Methylcrotonyl-CoA carboxylase 2) (MCCase beta
            subunit) (3-methylcrotonyl-CoA:carbon dioxide ligase beta
            subunit) (3-Methylcrotonyl-CoA carboxylase
            non-biotin-containing subunit)
          Length = 563

 Score =  430 bits (1106), Expect = e-120
 Identities = 205/299 (68%), Positives = 247/299 (82%)
 Frame = +2

Query: 494  CRRSGVTDHYAMNDKDAIHITRSIVRNLNRHKRMSVAFEKPEQPRYPADELYGIVGANLK 673
            CR+SGV+DH+A++D  A+H+TR +VRNLN  K++ V  E  E+P +PADELYGIVGANLK
Sbjct: 267  CRKSGVSDHWALDDHHALHLTRKVVRNLNYQKKLDVTIEPSEEPLFPADELYGIVGANLK 326

Query: 674  RTFNMYEVIARIVDGSKMQEFKQLYGETLICGFSRIWGYPVGILANNGVLFSESSLKGAH 853
            R+F++ EVIARIVDGS+  EFK  YG+TL+ GF+RI+GYPVGI+ NNGVLFSES+ KG H
Sbjct: 327  RSFDVREVIARIVDGSRFTEFKAFYGDTLVTGFARIFGYPVGIVGNNGVLFSESAKKGTH 386

Query: 854  FIQLCCQRNIPLIFFQHITGFMVGRDAEAGGIAKNGAKLVTAVATANVPKITVIIGNSYG 1033
            F+QLCCQRNIPL+F Q+ITGFMVGR+ EA GIAK+GAK+V AVA A VPKIT+IIG SYG
Sbjct: 387  FVQLCCQRNIPLLFLQNITGFMVGREYEAEGIAKDGAKMVAAVACAQVPKITLIIGGSYG 446

Query: 1034 AGNYGMCGRAYGPRFLYMWPNSRIIVMGGEQAANVLVQIQKDQKIREGKEMSIGEESEIR 1213
            AGNYGMCGRAY PRFLY+WPN+RI VMGGEQAANVL  I KDQ+ REGK+ S  +E+ ++
Sbjct: 447  AGNYGMCGRAYSPRFLYIWPNARISVMGGEQAANVLATITKDQRAREGKQFSSADEAALK 506

Query: 1214 NPIISKFEKEGHPYYSSARLWDDGIIDPQDTRSVLALSLSACFNREYSNDSTRFGLFRM 1390
             PII KFE+EG+PYYSSAR+WDDGIIDP DTR VL LS SA  N     + T FG+FRM
Sbjct: 507  EPIIKKFEEEGNPYYSSARVWDDGIIDPADTRLVLGLSFSAALNAPI--EKTDFGIFRM 563

>sp|Q9V9A7|PCCB_DROME Putative propionyl-CoA carboxylase beta chain, mitochondrial
            precursor (PCCase beta subunit) (Propanoyl-CoA:carbon
            dioxide ligase beta subunit)
          Length = 578

 Score =  404 bits (1038), Expect = e-112
 Identities = 202/315 (64%), Positives = 242/315 (76%), Gaps = 16/315 (5%)
 Frame = +2

Query: 494  CRRSGVTDHYAMNDKDAIHITRSIVRNLNRHKRMS----------VAFEKP------EQP 625
            C+ SGVTDHYA++D+ A+++ R IV NLN     S          V F+        E+P
Sbjct: 266  CKTSGVTDHYALDDEHALYLARQIVSNLNLSATNSYNDQLMHSSQVNFQTATPPSAVEEP 325

Query: 626  RYPADELYGIVGANLKRTFNMYEVIARIVDGSKMQEFKQLYGETLICGFSRIWGYPVGIL 805
            RY A+ELYGIVG NL ++F++ EVIARIVDGS+  EFK+LYGETL+CGF++++G+ VGI+
Sbjct: 326  RYDAEELYGIVGPNLTKSFDVREVIARIVDGSRFTEFKKLYGETLVCGFAKLYGHTVGIV 385

Query: 806  ANNGVLFSESSLKGAHFIQLCCQRNIPLIFFQHITGFMVGRDAEAGGIAKNGAKLVTAVA 985
             NNGVLFSES+LKGAHFIQLC QR IPL+F Q+ITGFMVGRDAEA GIAKNGAK+VTAVA
Sbjct: 386  GNNGVLFSESALKGAHFIQLCAQRKIPLVFLQNITGFMVGRDAEANGIAKNGAKMVTAVA 445

Query: 986  TANVPKITVIIGNSYGAGNYGMCGRAYGPRFLYMWPNSRIIVMGGEQAANVLVQIQKDQK 1165
             ANVPK TVIIG SYGAGNYGMCGRAY PRFLYMWPNSRI VMGG QAANV+ QI +DQ+
Sbjct: 446  CANVPKFTVIIGGSYGAGNYGMCGRAYSPRFLYMWPNSRISVMGGTQAANVMAQITEDQR 505

Query: 1166 IREGKEMSIGEESEIRNPIISKFEKEGHPYYSSARLWDDGIIDPQDTRSVLALSLSACFN 1345
             R GKE S  E  +++ PI+  FE EG PYYS+ARLWDDGIIDP +TR +L LSL A  N
Sbjct: 506  KRAGKEFSEEEAQKLKAPIVEMFEAEGSPYYSTARLWDDGIIDPANTRQILGLSLKAALN 565

Query: 1346 REYSNDSTRFGLFRM 1390
               +   T+FG+FRM
Sbjct: 566  N--AGQETKFGVFRM 578

>sp|P34385|YLPC_CAEEL Hypothetical protein F02A9.4a in chromosome III
          Length = 608

 Score =  394 bits (1013), Expect = e-109
 Identities = 187/299 (62%), Positives = 238/299 (79%)
 Frame = +2

Query: 494  CRRSGVTDHYAMNDKDAIHITRSIVRNLNRHKRMSVAFEKPEQPRYPADELYGIVGANLK 673
            C  SGVTD+YA NDK A+++ RS +  L   +         ++P YPA+E+YGIVG+NLK
Sbjct: 312  CGESGVTDYYAHNDKHALYLARSCIAGLPPVEEHMTFNPNADEPLYPAEEIYGIVGSNLK 371

Query: 674  RTFNMYEVIARIVDGSKMQEFKQLYGETLICGFSRIWGYPVGILANNGVLFSESSLKGAH 853
            +T+++ EVIARIVDGS+  EFK+ YGETL+ GF+ I+G  VGILANNGVLF+ES++KG+H
Sbjct: 372  KTYDVREVIARIVDGSRFHEFKERYGETLVTGFATIYGQRVGILANNGVLFAESAMKGSH 431

Query: 854  FIQLCCQRNIPLIFFQHITGFMVGRDAEAGGIAKNGAKLVTAVATANVPKITVIIGNSYG 1033
            FI+LCCQR IPL+F Q+ITGFMVGRDAEAGGIAK+GAKLVTAVA A VPKITV++G SYG
Sbjct: 432  FIELCCQRKIPLLFLQNITGFMVGRDAEAGGIAKHGAKLVTAVACAKVPKITVLVGGSYG 491

Query: 1034 AGNYGMCGRAYGPRFLYMWPNSRIIVMGGEQAANVLVQIQKDQKIREGKEMSIGEESEIR 1213
            AGNYGMCGR Y PR+++MWPNSRI VMGGEQAANVL  +QK++K REG + +  ++ E+R
Sbjct: 492  AGNYGMCGRGYSPRYVFMWPNSRISVMGGEQAANVLSTVQKEKKKREGADWTDQQDLELR 551

Query: 1214 NPIISKFEKEGHPYYSSARLWDDGIIDPQDTRSVLALSLSACFNREYSNDSTRFGLFRM 1390
             P+  KFEKEGHPY++SARLWDDG+IDP+DTR VL L+  +   +      T+FG+FRM
Sbjct: 552  KPVEEKFEKEGHPYFASARLWDDGVIDPKDTRKVLGLAFQSTLQKPI--PETKFGVFRM 608

>sp|Q9LDD8|MCCB_ARATH Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial precursor
            (3-Methylcrotonyl-CoA carboxylase 2) (MCCase beta
            subunit) (3-methylcrotonyl-CoA:carbon dioxide ligase beta
            subunit)
          Length = 587

 Score =  321 bits (822), Expect = 4e-87
 Identities = 163/305 (53%), Positives = 216/305 (70%), Gaps = 6/305 (1%)
 Frame = +2

Query: 494  CRRSGVTDHYAMNDKDAIHITRSIVRNLNRHKR--MSVAFEKP----EQPRYPADELYGI 655
            C  SGV+D++A ++   + I R+IV+NL+   +  M   F       ++P Y  +EL  I
Sbjct: 285  CTVSGVSDYFAQDELHGLAIGRNIVKNLHMAAKQGMEGTFGSKNLVYKEPLYDINELRSI 344

Query: 656  VGANLKRTFNMYEVIARIVDGSKMQEFKQLYGETLICGFSRIWGYPVGILANNGVLFSES 835
               + K+ F++  +IARIVDGS+  EFK+ YG TL+ GF+RI+G  VGI+ NNG+LF+ES
Sbjct: 345  APVDHKQQFDVRSIIARIVDGSEFDEFKKQYGTTLVTGFARIYGQTVGIIGNNGILFNES 404

Query: 836  SLKGAHFIQLCCQRNIPLIFFQHITGFMVGRDAEAGGIAKNGAKLVTAVATANVPKITVI 1015
            +LKGAHFI+LC QR IPL+F Q+ITGFMVG  AEA GIAK GAK+V AV+ A VPKIT+I
Sbjct: 405  ALKGAHFIELCSQRKIPLVFLQNITGFMVGSRAEANGIAKAGAKMVMAVSCAKVPKITII 464

Query: 1016 IGNSYGAGNYGMCGRAYGPRFLYMWPNSRIIVMGGEQAANVLVQIQKDQKIREGKEMSIG 1195
             G S+GAGNY MCGRAY P F+++WPN+RI +MGG QAA VL QI++  K R+G + +  
Sbjct: 465  TGASFGAGNYAMCGRAYSPDFMFIWPNARIGIMGGAQAAGVLTQIERATKKRQGIKWTEE 524

Query: 1196 EESEIRNPIISKFEKEGHPYYSSARLWDDGIIDPQDTRSVLALSLSACFNREYSNDSTRF 1375
            EE   +   +  +E+E +PYYS+ARLWDDG+IDP DTR VL L LSA  NR    + TRF
Sbjct: 525  EEEAFKKKTVDAYEREANPYYSTARLWDDGVIDPCDTRKVLGLCLSAALNRPL--EDTRF 582

Query: 1376 GLFRM 1390
            G+FRM
Sbjct: 583  GVFRM 587

>sp|Q8GBW6|12S_PROFR Methylmalonyl-CoA carboxyltransferase 12S subunit (Transcarboxylase
            12S subunit)
          Length = 611

 Score =  150 bits (378), Expect = 1e-35
 Identities = 96/279 (34%), Positives = 146/279 (52%), Gaps = 8/279 (2%)
 Frame = +2

Query: 518  HYAMNDKDAIH-ITRSIVRNLNRHKRMSVAFEKPEQPRYPADELYGIVGANLKRTFNMYE 694
            H+   D DA   I + ++  L ++     +F  P     P  EL  IV  + K+ +++ +
Sbjct: 236  HFVAEDDDAAELIAKKLLSFLPQNNTEEASFVNPNNDVSPNTELRDIVPIDGKKGYDVRD 295

Query: 695  VIARIVDGSKMQEFKQLYGETLICGFSRIWGYPVGILAN-----NGVLFSESSLKGAHFI 859
            VIA+IVD     E K  Y   L+  F+R+ G  VGI+AN     +G L   +S K A F+
Sbjct: 296  VIAKIVDWGDYLEVKAGYATNLVTAFARVNGRSVGIVANQPSVMSGCLDINASDKAAEFV 355

Query: 860  QLCCQRNIPLIFFQHITGFMVGRDAEAGGIAKNGAKLVTAVATANVPKITVIIGNSYGAG 1039
              C   NIPL+    + GF+ G   E GGI ++GAK++ A + A VPKITV++  +YG  
Sbjct: 356  NFCDSFNIPLVQLVDVPGFLPGVQQEYGGIIRHGAKMLYAYSEATVPKITVVLRKAYGGS 415

Query: 1040 NYGMCGRAYGPRFLYMWPNSRIIVMGGEQAANVLVQIQKDQKIREGKEMSIGEESE-IRN 1216
               MC R  G   +Y WP++ I VMG E AANV+ +          KE+   ++ + +R 
Sbjct: 416  YLAMCNRDLGADAVYAWPSAEIAVMGAEGAANVIFR----------KEIKAADDPDAMRA 465

Query: 1217 PIISKFEKE-GHPYYSSARLWDDGIIDPQDTRSVLALSL 1330
              I +++     PY ++AR   D +IDP DTR  +A +L
Sbjct: 466  EKIEEYQNAFNTPYVAAARGQVDDVIDPADTRRKIASAL 504

>sp|P53003|PCCB_SACER Propionyl-CoA carboxylase beta chain (PCCase) (Propanoyl-CoA:carbon
            dioxide ligase)
          Length = 546

 Score =  123 bits (308), Expect = 2e-27
 Identities = 89/292 (30%), Positives = 144/292 (49%), Gaps = 15/292 (5%)
 Frame = +2

Query: 500  RSGVTDHYAMNDKDAIHITRSIVRNL-NRHKRMSVAFEKPE-QPRYPAD-------ELYG 652
            RSG   + A ++ DAI   + ++  L + +   S  F   E +    AD       EL  
Sbjct: 240  RSGNAHYLATDEDDAISYVKELLSFLPSNNLSSSPVFPGAEVEEGSVADGVGDADLELDA 299

Query: 653  IVGANLKRTFNMYEVIARIVDGSKMQEFKQLYGETLICGFSRIWGYPVGILANN-----G 817
            +V  +  + ++M EVI R+VD  +  E   L+   ++CGF RI G  VG++AN      G
Sbjct: 300  LVPDSPNQPYDMREVITRLVDEGEFLEVSALFAPNMLCGFGRIEGASVGVVANQPMQLAG 359

Query: 818  VLFSESSLKGAHFIQLCCQRNIPLIFFQHITGFMVGRDAEAGGIAKNGAKLVTAVATANV 997
             L  ++S K A F++ C   NIP++    + GF+ G   +   I + GAKL+ A A A V
Sbjct: 360  TLDIDASEKAARFVRFCDAFNIPVLTLVDVPGFLPGTGQDWNAIIRRGAKLLYAYAEATV 419

Query: 998  PKITVIIGNSYGAGNYGMCGRAYGPRFLYMWPNSRIIVMGGEQAANVLVQIQKDQKIREG 1177
            P +TVI   +YG     M  +  G      WP ++I VMG + AAN+L + Q  +    G
Sbjct: 420  PLVTVITRKAYGGAYDVMGSKHLGADINLAWPTAQIAVMGAQGAANILYRRQLAEAAERG 479

Query: 1178 KEMSIGEESEIRNPIISKFEKE-GHPYYSSARLWDDGIIDPQDTRSVLALSL 1330
            +++       +R  +  ++E    +PY ++ R + D +I P  TR  +A +L
Sbjct: 480  EDV-----EALRARLQQEYEDTLCNPYVAAERGYVDSVIPPSHTRGHVARAL 526

>sp|P05166|PCCB_HUMAN Propionyl-CoA carboxylase beta chain, mitochondrial precursor (PCCase
            beta subunit) (Propanoyl-CoA:carbon dioxide ligase beta
            subunit)
          Length = 539

 Score =  122 bits (307), Expect = 2e-27
 Identities = 91/289 (31%), Positives = 134/289 (46%), Gaps = 6/289 (2%)
 Frame = +2

Query: 503  SGVTDHYAMNDKDAIHITRSIVRNLNRHKRMSVAFEKPEQPRYP-ADELYGIVGANLKRT 679
            SGV      ND DA+   R     L    +   +  +   P      EL  IV     + 
Sbjct: 254  SGVAHRAFENDVDALCNLRDFFNYLPLSSQDPASVRECHDPSDRLVPELDTIVPLESTKA 313

Query: 680  FNMYEVIARIVDGSKMQEFKQLYGETLICGFSRIWGYPVGILAN-----NGVLFSESSLK 844
            +NM ++I  +VD  +  E    Y + +I GF+R+ G  VGI+ N     +G L   SS+K
Sbjct: 314  YNMVDIIHSVVDEREFFEIMPNYAKNIIVGFARMNGRTVGIVGNQPKVASGCLDINSSVK 373

Query: 845  GAHFIQLCCQRNIPLIFFQHITGFMVGRDAEAGGIAKNGAKLVTAVATANVPKITVIIGN 1024
            GA F++ C   NIPLI F  + GF+ G   E GGI ++GAKL+ A A A VPK+TVI   
Sbjct: 374  GARFVRFCDAFNIPLITFVDVPGFLPGTAQEYGGIIRHGAKLLYAFAEATVPKVTVITRK 433

Query: 1025 SYGAGNYGMCGRAYGPRFLYMWPNSRIIVMGGEQAANVLVQIQKDQKIREGKEMSIGEES 1204
            +YG     M  +       Y WP + I VMG + A  +         I +G E     ++
Sbjct: 434  AYGGAYDVMSSKHLCGDTNYAWPTAEIAVMGAKGAVEI---------IFKGHENVEAAQA 484

Query: 1205 EIRNPIISKFEKEGHPYYSSARLWDDGIIDPQDTRSVLALSLSACFNRE 1351
            E         EK  +P+ ++ R + D II P  TR+ +   L    +++
Sbjct: 485  EY-------IEKFANPFPAAVRGFVDDIIQPSSTRARICCDLDVLASKK 526

>sp|P07633|PCCB_RAT Propionyl-CoA carboxylase beta chain, mitochondrial precursor (PCCase
            beta subunit) (Propanoyl-CoA:carbon dioxide ligase beta
            subunit)
          Length = 541

 Score =  122 bits (305), Expect = 4e-27
 Identities = 85/289 (29%), Positives = 136/289 (47%), Gaps = 6/289 (2%)
 Frame = +2

Query: 503  SGVTDHYAMNDKDAIHITRSIVRNLNRHKRMSVAFEKPEQPRYP-ADELYGIVGANLKRT 679
            SGV      ND DA+   R  +  L    +   +  +   P      EL  +V     + 
Sbjct: 256  SGVAHRAFDNDVDALCNLREFLNFLPLSNQDPASIRECHDPSDRLVPELDTVVPLESSKA 315

Query: 680  FNMYEVIARIVDGSKMQEFKQLYGETLICGFSRIWGYPVGILAN-----NGVLFSESSLK 844
            +NM ++I  ++D  +  E    Y + ++ GF+R+ G  VGI+ N     +G L   SS+K
Sbjct: 316  YNMLDIIHAVIDEREFFEIMPNYAKNIVIGFARMNGRTVGIVGNQPNVASGCLDINSSVK 375

Query: 845  GAHFIQLCCQRNIPLIFFQHITGFMVGRDAEAGGIAKNGAKLVTAVATANVPKITVIIGN 1024
            GA F++ C   +IPLI F  + GF+ G   E GGI ++GAKL+ A A A VPKITVI   
Sbjct: 376  GARFVRFCDAFSIPLITFVDVPGFLPGTAQEYGGIIRHGAKLLYAFAEATVPKITVITRK 435

Query: 1025 SYGAGNYGMCGRAYGPRFLYMWPNSRIIVMGGEQAANVLVQIQKDQKIREGKEMSIGEES 1204
            +YG     M  +       Y WP + I VMG + A  ++ +  +D +  + + +      
Sbjct: 436  AYGGAYDVMSSKHLLGDTNYAWPTAEIAVMGAKGAVEIIFKGHEDVEAAQAEYV------ 489

Query: 1205 EIRNPIISKFEKEGHPYYSSARLWDDGIIDPQDTRSVLALSLSACFNRE 1351
                      EK  +P+ ++ R + D II P  TR+ +   L    +++
Sbjct: 490  ----------EKFANPFPAAVRGFVDDIIQPSSTRARICCDLEVLASKK 528

>sp|P96885|PCC5_MYCTU Probable propionyl-CoA carboxylase beta chain 5 (PCCase)
            (Propanoyl-CoA:carbon dioxide ligase)
          Length = 548

 Score =  121 bits (303), Expect = 6e-27
 Identities = 84/291 (28%), Positives = 139/291 (47%), Gaps = 14/291 (4%)
 Frame = +2

Query: 500  RSGVTDHYAMNDKDAIHITRSIVRNLNRHKRMSVAFEKPEQPRYPADE--------LYGI 655
            +SG   + A  ++DA    R ++  L  +        +   P  P +E        L  +
Sbjct: 244  KSGTAHYAASGEQDAFDYVRELLSYLPPNNSTDAPRYQAAAPTGPIEENLTDEDLELDTL 303

Query: 656  VGANLKRTFNMYEVIARIVDGSKMQEFKQLYGETLICGFSRIWGYPVGILANN-----GV 820
            +  +  + ++M+EVI R++D  +  E +  Y + ++ GF RI G PVGI+AN      G 
Sbjct: 304  IPDSPNQPYDMHEVITRLLD-DEFLEIQAGYAQNIVVGFGRIDGRPVGIVANQPTHFAGC 362

Query: 821  LFSESSLKGAHFIQLCCQRNIPLIFFQHITGFMVGRDAEAGGIAKNGAKLVTAVATANVP 1000
            L   +S K A F++ C   NIP++    + GF+ G D E  GI + GAKL+ A   A VP
Sbjct: 363  LDINASEKAARFVRTCDCFNIPIVMLVDVPGFLPGTDQEYNGIIRRGAKLLYAYGEATVP 422

Query: 1001 KITVIIGNSYGAGNYGMCGRAYGPRFLYMWPNSRIIVMGGEQAANVLVQIQKDQKIREGK 1180
            KITVI   +YG     M  +  G      WP ++I VMG   A   + + Q  +    G+
Sbjct: 423  KITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIAVMGASGAVGFVYRQQLAEAAANGE 482

Query: 1181 EMSIGEESEIRNPIISKFEKE-GHPYYSSARLWDDGIIDPQDTRSVLALSL 1330
            ++      ++R  +  ++E    +PY ++ R + D +I P  TR  +  +L
Sbjct: 483  DI-----DKLRLRLQQEYEDTLVNPYVAAERGYVDAVIPPSHTRGYIGTAL 528

>sp|Q99MN9|PCCB_MOUSE Propionyl-CoA carboxylase beta chain, mitochondrial precursor (PCCase
            beta subunit) (Propanoyl-CoA:carbon dioxide ligase beta
            subunit)
          Length = 541

 Score =  121 bits (303), Expect = 6e-27
 Identities = 86/289 (29%), Positives = 133/289 (46%), Gaps = 6/289 (2%)
 Frame = +2

Query: 503  SGVTDHYAMNDKDAIHITRSIVRNLNRHKRMSVAFEKPEQPRYP-ADELYGIVGANLKRT 679
            SGV      ND DA+   R     L    +      +   P      EL  +V     + 
Sbjct: 256  SGVAHRAFDNDVDALCNLREFFNFLPLSSQDPAPIRECHDPSDRLVPELDTVVPLESSKA 315

Query: 680  FNMYEVIARIVDGSKMQEFKQLYGETLICGFSRIWGYPVGILAN-----NGVLFSESSLK 844
            +NM ++I  ++D  +  E    Y   ++ GF+R+ G  VGI+ N     +G L   SS+K
Sbjct: 316  YNMLDIIHAVIDEREFFEIMPSYALNIVVGFARMNGRTVGIVGNQPNVASGCLDINSSVK 375

Query: 845  GAHFIQLCCQRNIPLIFFQHITGFMVGRDAEAGGIAKNGAKLVTAVATANVPKITVIIGN 1024
            GA F++ C   NIPLI F  + GF+ G   E GGI ++GAKL+ A A A VPKITVI   
Sbjct: 376  GARFVRFCDAFNIPLITFVDVPGFLPGTAQEYGGIIRHGAKLLYAFAEATVPKITVITRK 435

Query: 1025 SYGAGNYGMCGRAYGPRFLYMWPNSRIIVMGGEQAANVLVQIQKDQKIREGKEMSIGEES 1204
            +YG     M  +       Y WP + I VMG + A  ++ +  +D +  + + +      
Sbjct: 436  AYGGAYDVMSSKHLLGDTNYAWPTAEIAVMGAKGAVEIIFKGHQDVEAAQAEYV------ 489

Query: 1205 EIRNPIISKFEKEGHPYYSSARLWDDGIIDPQDTRSVLALSLSACFNRE 1351
                      EK  +P+ ++ R + D II P  TR+ +   L    +++
Sbjct: 490  ----------EKFANPFPAAVRGFVDDIIQPSSTRARICCDLEVLASKK 528

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 165,476,996
Number of Sequences: 369166
Number of extensions: 3366883
Number of successful extensions: 8450
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8425
length of database: 68,354,980
effective HSP length: 115
effective length of database: 47,110,455
effective search space used: 18420187905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00706

  1. Dr_sW_018_H01
  2. Dr_sW_021_A04