DrC_00637
- Cluster detail
- GO Category :
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_00637 (585 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|P35135|UBC4_LYCES Ubiquitin-conjugating enzyme E2-17 kDa... 190 2e-48 sp|P35134|UBCB_ARATH Ubiquitin-conjugating enzyme E2-17 kDa... 189 6e-48 sp|P35131|UBC8_ARATH Ubiquitin-conjugating enzyme E2-17 kDa... 188 7e-48 sp|P35132|UBC9_ARATH Ubiquitin-conjugating enzyme E2-17 kDa... 188 7e-48 sp|P25867|UBCD1_DROME Ubiquitin-conjugating enzyme E2-17 kD... 188 1e-47 sp|P35133|UBCA_ARATH Ubiquitin-conjugating enzyme E2-17 kDa... 187 1e-47 sp|P62839|UB2D2_RAT Ubiquitin-conjugating enzyme E2 D2 (Ubi... 186 4e-47 sp|P35129|UBC2_CAEEL Ubiquitin-conjugating enzyme E2 2 (Ubi... 184 1e-46 sp|P61078|UB2D3_RAT Ubiquitin-conjugating enzyme E2 D3 (Ubi... 184 1e-46 sp|P61080|UB2D1_MOUSE Ubiquitin-conjugating enzyme E2 D1 (U... 182 4e-46
>sp|P35135|UBC4_LYCES Ubiquitin-conjugating enzyme E2-17 kDa (Ubiquitin-protein ligase) (Ubiquitin carrier protein) Length = 148 Score = 190 bits (483), Expect = 2e-48 Identities = 88/114 (77%), Positives = 95/114 (83%) Frame = +1 Query: 139 WAATIMGPADSPYEGGIFSLSIEFPPDYPFKPPMVKFDTKIFHPNINSNGSICLDILKGQ 318 W ATIMGP DSPY GG+F +SI FPPDYPFKPP V F TK+FHPNINSNGSICLDILK Q Sbjct: 33 WQATIMGPTDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ 92 Query: 319 WSPALTISKVLLSICSLLCDPNADDPLDSNAANLYKKDRKKFDETARSWTMKYA 480 WSPALTISKVLLSICSLL DPN DDPL A++YK DR K++ TARSWT KYA Sbjct: 93 WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 146
Score = 42.7 bits (99), Expect = 7e-04
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = +3
Query: 42 MALKRIQSELRSLMSDPPAQCSAGPKESDMVH 137
MA KRI EL+ L DPP CSAGP DM H
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFH 32
>sp|P35134|UBCB_ARATH Ubiquitin-conjugating enzyme E2-17 kDa 11 (Ubiquitin-protein ligase 11) (Ubiquitin carrier protein 11) Length = 148 Score = 189 bits (479), Expect = 6e-48 Identities = 86/114 (75%), Positives = 95/114 (83%) Frame = +1 Query: 139 WAATIMGPADSPYEGGIFSLSIEFPPDYPFKPPMVKFDTKIFHPNINSNGSICLDILKGQ 318 W ATIMGP +SPY GG+F +SI FPPDYPFKPP V F TK++HPNINSNGSICLDILK Q Sbjct: 33 WQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQ 92 Query: 319 WSPALTISKVLLSICSLLCDPNADDPLDSNAANLYKKDRKKFDETARSWTMKYA 480 WSPALTISKVLLSICSLL DPN DDPL A++YK DR K++ TARSWT KYA Sbjct: 93 WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYESTARSWTQKYA 146
Score = 43.1 bits (100), Expect = 5e-04
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = +3
Query: 42 MALKRIQSELRSLMSDPPAQCSAGPKESDMVH 137
MA KRI EL+ L DPP+ CSAGP DM H
Sbjct: 1 MASKRILKELKDLQKDPPSNCSAGPVAEDMFH 32
>sp|P35131|UBC8_ARATH Ubiquitin-conjugating enzyme E2-17 kDa 8 (Ubiquitin-protein ligase 8) (Ubiquitin carrier protein 8) (UBCAT4A) Length = 148 Score = 188 bits (478), Expect = 7e-48 Identities = 86/114 (75%), Positives = 96/114 (84%) Frame = +1 Query: 139 WAATIMGPADSPYEGGIFSLSIEFPPDYPFKPPMVKFDTKIFHPNINSNGSICLDILKGQ 318 W ATIMGPA+SPY GG+F ++I FPPDYPFKPP V F TK+FHPNINSNGSICLDILK Q Sbjct: 33 WQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ 92 Query: 319 WSPALTISKVLLSICSLLCDPNADDPLDSNAANLYKKDRKKFDETARSWTMKYA 480 WSPALTISKVLLSICSLL DPN DDPL A++YK DR K++ TAR+WT KYA Sbjct: 93 WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARNWTQKYA 146
Score = 42.7 bits (99), Expect = 7e-04
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = +3
Query: 42 MALKRIQSELRSLMSDPPAQCSAGPKESDMVH 137
MA KRI EL+ L DPP CSAGP DM H
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFH 32
>sp|P35132|UBC9_ARATH Ubiquitin-conjugating enzyme E2-17 kDa 9 (Ubiquitin-protein ligase 9) (Ubiquitin carrier protein 9) (UBCAT4B) Length = 148 Score = 188 bits (478), Expect = 7e-48 Identities = 85/114 (74%), Positives = 96/114 (84%) Frame = +1 Query: 139 WAATIMGPADSPYEGGIFSLSIEFPPDYPFKPPMVKFDTKIFHPNINSNGSICLDILKGQ 318 W ATIMGP+DSPY GG+F ++I FPPDYPFKPP V F TK+FHPNINSNGSICLDILK Q Sbjct: 33 WQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ 92 Query: 319 WSPALTISKVLLSICSLLCDPNADDPLDSNAANLYKKDRKKFDETARSWTMKYA 480 WSPALTISKVLLSICSLL DPN DDPL A++YK D+ K++ TAR+WT KYA Sbjct: 93 WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARTWTQKYA 146
Score = 43.5 bits (101), Expect = 4e-04
Identities = 21/41 (51%), Positives = 22/41 (53%)
Frame = +3
Query: 42 MALKRIQSELRSLMSDPPAQCSAGPKESDMVHLGRNYYGTS 164
MA KRI EL+ L DPP CSAGP DM H G S
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPS 41
>sp|P25867|UBCD1_DROME Ubiquitin-conjugating enzyme E2-17 kDa (Ubiquitin-protein ligase) (Ubiquitin carrier protein) (Effete protein) Length = 147 Score = 188 bits (477), Expect = 1e-47 Identities = 85/114 (74%), Positives = 95/114 (83%) Frame = +1 Query: 139 WAATIMGPADSPYEGGIFSLSIEFPPDYPFKPPMVKFDTKIFHPNINSNGSICLDILKGQ 318 W ATIMGP DSPY+GG+F L+I FP DYPFKPP V F T+I+HPNINSNGSICLDIL+ Q Sbjct: 33 WQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ 92 Query: 319 WSPALTISKVLLSICSLLCDPNADDPLDSNAANLYKKDRKKFDETARSWTMKYA 480 WSPALTISKVLLSICSLLCDPN DDPL A +YK DR+K++E AR WT KYA Sbjct: 93 WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYA 146
Score = 45.8 bits (107), Expect = 8e-05
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = +3
Query: 42 MALKRIQSELRSLMSDPPAQCSAGPKESDMVH 137
MALKRI EL+ L DPPAQCSAGP D+ H
Sbjct: 1 MALKRINKELQDLGRDPPAQCSAGPVGDDLFH 32
>sp|P35133|UBCA_ARATH Ubiquitin-conjugating enzyme E2-17 kDa 10/12 (Ubiquitin-protein ligase 10/12) (Ubiquitin carrier protein 10/12) Length = 148 Score = 187 bits (476), Expect = 1e-47 Identities = 85/114 (74%), Positives = 96/114 (84%) Frame = +1 Query: 139 WAATIMGPADSPYEGGIFSLSIEFPPDYPFKPPMVKFDTKIFHPNINSNGSICLDILKGQ 318 W ATIMGP++SPY GG+F ++I FPPDYPFKPP V F TK+FHPNINSNGSICLDILK Q Sbjct: 33 WQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ 92 Query: 319 WSPALTISKVLLSICSLLCDPNADDPLDSNAANLYKKDRKKFDETARSWTMKYA 480 WSPALTISKVLLSICSLL DPN DDPL A++YK D+ K++ TARSWT KYA Sbjct: 93 WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARSWTQKYA 146
Score = 43.5 bits (101), Expect = 4e-04
Identities = 21/41 (51%), Positives = 22/41 (53%)
Frame = +3
Query: 42 MALKRIQSELRSLMSDPPAQCSAGPKESDMVHLGRNYYGTS 164
MA KRI EL+ L DPP CSAGP DM H G S
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPS 41
>sp|P62839|UB2D2_RAT Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2) (Ubiquitin carrier protein D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB 2) sp|P62838|UB2D2_MOUSE Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2) (Ubiquitin carrier protein D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB 2) sp|P62837|UB2D2_HUMAN Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2) (Ubiquitin carrier protein D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB 2) sp|P62840|UB5B_XENLA Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2) (Ubiquitin carrier protein D2) (Xubc4) Length = 147 Score = 186 bits (472), Expect = 4e-47 Identities = 84/114 (73%), Positives = 94/114 (82%) Frame = +1 Query: 139 WAATIMGPADSPYEGGIFSLSIEFPPDYPFKPPMVKFDTKIFHPNINSNGSICLDILKGQ 318 W ATIMGP DSPY+GG+F L+I FP DYPFKPP V F T+I+HPNINSNGSICLDIL+ Q Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ 92 Query: 319 WSPALTISKVLLSICSLLCDPNADDPLDSNAANLYKKDRKKFDETARSWTMKYA 480 WSPALTISKVLLSICSLLCDPN DDPL A +YK DR+K++ AR WT KYA Sbjct: 93 WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYA 146
Score = 47.4 bits (111), Expect = 3e-05
Identities = 22/32 (68%), Positives = 22/32 (68%)
Frame = +3
Query: 42 MALKRIQSELRSLMSDPPAQCSAGPKESDMVH 137
MALKRI EL L DPPAQCSAGP DM H
Sbjct: 1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFH 32
>sp|P35129|UBC2_CAEEL Ubiquitin-conjugating enzyme E2 2 (Ubiquitin-protein ligase 2) (Ubiquitin carrier protein 2) Length = 147 Score = 184 bits (468), Expect = 1e-46 Identities = 82/114 (71%), Positives = 95/114 (83%) Frame = +1 Query: 139 WAATIMGPADSPYEGGIFSLSIEFPPDYPFKPPMVKFDTKIFHPNINSNGSICLDILKGQ 318 W ATIMGP +SPY+GG+F L+I FP DYPFKPP V F T+I+HPNINSNGSICLDIL+ Q Sbjct: 33 WQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ 92 Query: 319 WSPALTISKVLLSICSLLCDPNADDPLDSNAANLYKKDRKKFDETARSWTMKYA 480 WSPALTISKVLLSICSLLCDPN DDPL A +YK DR+++++ AR WT KYA Sbjct: 93 WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYA 146
Score = 47.8 bits (112), Expect = 2e-05
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +3
Query: 42 MALKRIQSELRSLMSDPPAQCSAGPKESDMVH 137
MALKRIQ EL+ L DPPAQCSAGP D+ H
Sbjct: 1 MALKRIQKELQDLGRDPPAQCSAGPVGDDLFH 32
>sp|P61078|UB2D3_RAT Ubiquitin-conjugating enzyme E2 D3 (Ubiquitin-protein ligase D3) (Ubiquitin carrier protein D3) (Ubiquitin-conjugating enzyme E2-17 kDa 3) (E2(17)KB 3) (Phosphoarginine phosphatase) (PAPase) sp|P61079|UB2D3_MOUSE Ubiquitin-conjugating enzyme E2 D3 (Ubiquitin-protein ligase D3) (Ubiquitin carrier protein D3) (Ubiquitin-conjugating enzyme E2-17 kDa 3) (E2(17)KB 3) sp|P61077|UB2D3_HUMAN Ubiquitin-conjugating enzyme E2 D3 (Ubiquitin-protein ligase D3) (Ubiquitin carrier protein D3) (Ubiquitin-conjugating enzyme E2-17 kDa 3) (E2(17)KB 3) Length = 147 Score = 184 bits (467), Expect = 1e-46 Identities = 83/114 (72%), Positives = 93/114 (81%) Frame = +1 Query: 139 WAATIMGPADSPYEGGIFSLSIEFPPDYPFKPPMVKFDTKIFHPNINSNGSICLDILKGQ 318 W ATIMGP DSPY+GG+F L+I FP DYPFKPP V F T+I+HPNINSNGSICLDIL+ Q Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ 92 Query: 319 WSPALTISKVLLSICSLLCDPNADDPLDSNAANLYKKDRKKFDETARSWTMKYA 480 WSPALTISKVLLSICSLLCDPN DDPL A +YK DR K++ +R WT KYA Sbjct: 93 WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYA 146
Score = 47.0 bits (110), Expect = 3e-05
Identities = 22/32 (68%), Positives = 22/32 (68%)
Frame = +3
Query: 42 MALKRIQSELRSLMSDPPAQCSAGPKESDMVH 137
MALKRI EL L DPPAQCSAGP DM H
Sbjct: 1 MALKRINKELSDLARDPPAQCSAGPVGDDMFH 32
>sp|P61080|UB2D1_MOUSE Ubiquitin-conjugating enzyme E2 D1 (Ubiquitin-protein ligase D1) (Ubiquitin carrier protein D1) (Ubiquitin-conjugating enzyme E2-17 kDa 1) (E2(17)KB 1) sp|P51668|UB2D1_HUMAN Ubiquitin-conjugating enzyme E2 D1 (Ubiquitin-protein ligase D1) (Ubiquitin carrier protein D1) (UbcH5) (Ubiquitin-conjugating enzyme E2-17 kDa 1) (E2(17)KB 1) Length = 147 Score = 182 bits (463), Expect = 4e-46 Identities = 80/114 (70%), Positives = 94/114 (82%) Frame = +1 Query: 139 WAATIMGPADSPYEGGIFSLSIEFPPDYPFKPPMVKFDTKIFHPNINSNGSICLDILKGQ 318 W ATIMGP DS Y+GG+F L++ FP DYPFKPP + F TKI+HPNINSNGSICLDIL+ Q Sbjct: 33 WQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQ 92 Query: 319 WSPALTISKVLLSICSLLCDPNADDPLDSNAANLYKKDRKKFDETARSWTMKYA 480 WSPALT+SKVLLSICSLLCDPN DDPL + A +YK D++K++ AR WT KYA Sbjct: 93 WSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQKYA 146
Score = 46.2 bits (108), Expect = 6e-05
Identities = 21/32 (65%), Positives = 22/32 (68%)
Frame = +3
Query: 42 MALKRIQSELRSLMSDPPAQCSAGPKESDMVH 137
MALKRIQ EL L DPPA CSAGP D+ H
Sbjct: 1 MALKRIQKELSDLQRDPPAHCSAGPVGDDLFH 32
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,362,032
Number of Sequences: 369166
Number of extensions: 1350541
Number of successful extensions: 3293
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3239
length of database: 68,354,980
effective HSP length: 105
effective length of database: 48,957,805
effective search space used: 4357244645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Cluster detail
