DrC_00632
- Cluster detail
- GO Category : Not Available
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_00632 (319 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|Q8VD04|GRAP1_MOUSE GRIP1-associated protein 1 (GRASP-1) ... 29 3.8 sp|Q9XCX8|ERA_PSEAE GTP-binding protein era homolog 29 3.8 sp|Q53479|IDSA_METTM Bifunctional short chain isoprenyl dip... 28 5.0 sp|P20967|ODO1_YEAST 2-oxoglutarate dehydrogenase E1 compon... 28 5.0 sp|P40059|DOT6_YEAST Disrupter of telomere silencing protein 6 28 5.0 sp|Q9UNA1|RHG26_HUMAN Rho-GTPase-activating protein 26 (Oli... 28 8.5 sp|Q15835|RK_HUMAN Rhodopsin kinase (RK) (G protein-coupled... 28 8.5 sp|Q9PK57|PT1_CHLMU Phosphoenolpyruvate-protein phosphotran... 28 8.5 sp|Q9I8P5|OTOR_RANCA Otoraplin precursor 28 8.5 sp|P32866|GPRK2_DROME G protein-coupled receptor kinase 2 28 8.5
>sp|Q8VD04|GRAP1_MOUSE GRIP1-associated protein 1 (GRASP-1) (HCMV-interacting protein) Length = 806 Score = 28.9 bits (63), Expect = 3.8 Identities = 22/64 (34%), Positives = 31/64 (48%) Frame = +2 Query: 5 EELAELIGDRGKRVGEALQFHVNDLSHLSDDHKVANKMMLNLWLEGKSSLTPSVANLVAA 184 + LAEL R +R GE L+ H L L D + A LN+ E S L + + A Sbjct: 286 QSLAEL---RDQRQGERLE-HAAALRALQDQIQTAKTQELNMLREQTSELASELQHRQAE 341 Query: 185 FEEI 196 +EE+ Sbjct: 342 YEEL 345
>sp|Q9XCX8|ERA_PSEAE GTP-binding protein era homolog Length = 305 Score = 28.9 bits (63), Expect = 3.8 Identities = 16/42 (38%), Positives = 25/42 (59%) Frame = +2 Query: 20 LIGDRGKRVGEALQFHVNDLSHLSDDHKVANKMMLNLWLEGK 145 +IGD+G+R+ Q D+ L D +K+MLNLW++ K Sbjct: 251 IIGDKGERIKSIGQNARKDMEVLFD-----SKVMLNLWVKVK 287
>sp|Q53479|IDSA_METTM Bifunctional short chain isoprenyl diphosphate synthase [Includes: Farnesyl pyrophosphate synthetase (FPP synthetase) (Dimethylallyltranstransferase); Geranyltranstransferase ] Length = 325 Score = 28.5 bits (62), Expect = 5.0 Identities = 21/68 (30%), Positives = 33/68 (48%) Frame = +2 Query: 5 EELAELIGDRGKRVGEALQFHVNDLSHLSDDHKVANKMMLNLWLEGKSSLTPSVANLVAA 184 E E + D GK +G A Q H + L +SD+ + + ++ EGK +L +V A Sbjct: 193 EREVEALEDYGKFIGLAFQIHDDYLDVVSDEESLGKPVGSDI-AEGKMTLM-----VVKA 246 Query: 185 FEEIGMDD 208 EE +D Sbjct: 247 LEEASEED 254
>sp|P20967|ODO1_YEAST 2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor (Alpha-ketoglutarate dehydrogenase) Length = 1014 Score = 28.5 bits (62), Expect = 5.0 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = +2 Query: 134 LEGKSSLTPSVANLVAAFEEIGMDDIVL 217 LEG S+ P + LV E+G++DIVL Sbjct: 274 LEGLESVVPGIKTLVDRSVELGVEDIVL 301
>sp|P40059|DOT6_YEAST Disrupter of telomere silencing protein 6 Length = 670 Score = 28.5 bits (62), Expect = 5.0 Identities = 10/22 (45%), Positives = 16/22 (72%) Frame = -3 Query: 215 ARYHPSRSPQMQQLDWRRMESG 150 ++Y P+R+P Q WRR++SG Sbjct: 98 SQYFPNRTPNACQFRWRRLKSG 119
>sp|Q9UNA1|RHG26_HUMAN Rho-GTPase-activating protein 26 (Oligophrenin-1-like protein) (GTPase regulator associated with focal adhesion kinase) Length = 814 Score = 27.7 bits (60), Expect = 8.5 Identities = 18/74 (24%), Positives = 38/74 (51%) Frame = +2 Query: 2 IEELAELIGDRGKRVGEALQFHVNDLSHLSDDHKVANKMMLNLWLEGKSSLTPSVANLVA 181 + E+ L+ ++ + LQ +N L++++++HK + NL + +L VA Sbjct: 486 VSEIHSLVHRLPEKNRQMLQLLMNHLANVANNHKQNLMTVANLGVVFGPTLLRPQEETVA 545 Query: 182 AFEEIGMDDIVLKI 223 A +I +IV++I Sbjct: 546 AIMDIKFQNIVIEI 559
>sp|Q15835|RK_HUMAN Rhodopsin kinase (RK) (G protein-coupled receptor kinase 1) Length = 563 Score = 27.7 bits (60), Expect = 8.5 Identities = 8/19 (42%), Positives = 15/19 (78%) Frame = -3 Query: 191 PQMQQLDWRRMESGLIFPP 135 P + L+WR++E+G++ PP Sbjct: 453 PLFKDLNWRQLEAGMLMPP 471
>sp|Q9PK57|PT1_CHLMU Phosphoenolpyruvate-protein phosphotransferase (Phosphotransferase system, enzyme I) Length = 567 Score = 27.7 bits (60), Expect = 8.5 Identities = 13/40 (32%), Positives = 24/40 (60%) Frame = +2 Query: 77 LSHLSDDHKVANKMMLNLWLEGKSSLTPSVANLVAAFEEI 196 + + D H ++N+++ +L + KSSL S NL+ EE+ Sbjct: 140 VDRIQDIHDISNRVIGHLCCQHKSSLGESDQNLIVFSEEL 179
>sp|Q9I8P5|OTOR_RANCA Otoraplin precursor Length = 133 Score = 27.7 bits (60), Expect = 8.5 Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Frame = -1 Query: 205 IHPDLLKCSN*IGDGWSQA*FSLQPEIEHHFIGYF--VVVTEM*EIIHVELQGLPDT 41 I+ L+K ++ G+ WS + +S Q + +GYF +VTE+ + ELQ LP T Sbjct: 71 IYTKLVKENDDAGEFWSGSVYSDQYRDQQGLVGYFPSSLVTEL-TVYKDELQELPTT 126
>sp|P32866|GPRK2_DROME G protein-coupled receptor kinase 2 Length = 714 Score = 27.7 bits (60), Expect = 8.5 Identities = 9/15 (60%), Positives = 14/15 (93%) Frame = -3 Query: 179 QLDWRRMESGLIFPP 135 QL+WRR+E+G++ PP Sbjct: 578 QLNWRRLEAGMLEPP 592
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,620,101
Number of Sequences: 369166
Number of extensions: 706477
Number of successful extensions: 1571
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1570
length of database: 68,354,980
effective HSP length: 74
effective length of database: 54,684,590
effective search space used: 1695222290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Cluster detail
