Planaria EST Database

DrC_00622

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00622
         (1566 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P34855|NU5M_APILI  NADH-ubiquinone oxidoreductase chain 5...   192   2e-48
sp|P48918|NU5M_ALBCO  NADH-ubiquinone oxidoreductase chain 5...   182   3e-45
sp|P34854|NU5M_ANOGA  NADH-ubiquinone oxidoreductase chain 5...   179   2e-44
sp|P51899|NU5M_ANOAR  NADH-ubiquinone oxidoreductase chain 5...   179   2e-44
sp|P33510|NU5M_ANOQU  NADH-ubiquinone oxidoreductase chain 5...   179   3e-44
sp|P07706|NU5M_DROYA  NADH-ubiquinone oxidoreductase chain 5...   178   3e-44
sp|Q36428|NU5M_LOCMI  NADH-ubiquinone oxidoreductase chain 5...   178   3e-44
sp|Q00232|NU5M_MYTED  NADH-ubiquinone oxidoreductase chain 5...   177   1e-43
sp|P18932|NU5M_DROME  NADH-ubiquinone oxidoreductase chain 5...   177   1e-43
sp|Q9ZYM7|NU5M_RHISA  NADH-ubiquinone oxidoreductase chain 5...   174   8e-43

>sp|P34855|NU5M_APILI NADH-ubiquinone oxidoreductase chain 5 (NADH dehydrogenase subunit 5)
          Length = 554

 Score =  192 bits (489), Expect = 2e-48
 Identities = 119/344 (34%), Positives = 179/344 (52%), Gaps = 17/344 (4%)
 Frame = +1

Query: 58   FDLIRFNSLNFLNYILYFDFYSCLFFMILFSIVFCVYTF--ISYYFFLEVNLFRFIYLLN 231
            +++  FNS+ F N++L  D Y  L F+ L S++F +     ISY    E+ + RF+YL+ 
Sbjct: 36   WNIYTFNSMKF-NFLLLID-YKSLMFIFLVSMIFSMIIIYSISYMDLSELKMDRFLYLMI 93

Query: 232  TFILSMVLLIVSPNLVSLLVGWDGLGFISFLLVC*FGXXXXXXXXLKTFLVNRFGDA--L 405
             F++SM +LI+SPN++S+++GWDGLG IS+ LV  +         + T L+NR GD   L
Sbjct: 94   LFLISMYMLILSPNMLSIILGWDGLGLISYCLVIYYMKMKSFTSGMVTILLNRLGDIGLL 153

Query: 406  FILGLVFIXXXXXXXXXXXXXXVLVLALM---TKRALYPFNSWLPEAMAAPTPVSALVHS 576
             I+GL+                +++  L+   TK A  PF++WLP AM APTPVS+LVHS
Sbjct: 154  LIMGLMTYYGSWNLSFYKMNEFMMIYILLMAFTKSAQIPFSTWLPMAMMAPTPVSSLVHS 213

Query: 577  STLVVSGLYVLFRYFDFLTVNILFFFTCIGLFTLYYRSFQALLAYDSKKLVAYSTLSQXX 756
            STLV +G+Y+L RY + L  N   +   I   T+ +    A    D KK+VAYSTLSQ  
Sbjct: 214  STLVTAGIYLLIRYVNLLDFNYKNYIMLIASLTMLFAGLVANFELDLKKVVAYSTLSQLG 273

Query: 757  XXXXXXXXXXXXXXXXXXXVHAVFKASLFVSVGSYMVVGSHHQDMRYLSSVWFMNPXXXX 936
                               +HA+FK+ +F+ VGSYM     +QD+R    ++++ P    
Sbjct: 274  FMMSMLSIGSTELVFLHLFIHAMFKSLMFMCVGSYMHYMYSNQDIRMYYGMYYIYPMKSM 333

Query: 937  XXXXXXXXXRGLPF----------FSCFFFKELVLSKIVNLNFG 1038
                      G PF             FFF +++   ++NL  G
Sbjct: 334  ILIFSILSLCGFPFLVGYYSKDLIIEMFFFSKMIYFSMINLIIG 377

>sp|P48918|NU5M_ALBCO NADH-ubiquinone oxidoreductase chain 5 (NADH dehydrogenase subunit 5)
          Length = 545

 Score =  182 bits (461), Expect = 3e-45
 Identities = 116/335 (34%), Positives = 163/335 (48%), Gaps = 8/335 (2%)
 Frame = +1

Query: 52   LFFDLIRFNSLNFLNYILYFDFYSCLFFMILFSIVFCVYTFISYYFFLEVNLFRFIYLLN 231
            L F+L    S+NF N  L  D  S  F +++  I  CV+ F + Y   +    RF ++L 
Sbjct: 26   LMFNLFSTQSVNF-NLALICDKVSTSFLVVVLLISSCVFLFANEYMSEDHYNIRFGWILI 84

Query: 232  TFILSMVLLIVSPNLVSLLVGWDGLGFISFLLVC*FGXXXXXXXXLKTFLVNRFGDALFI 411
            +F+ SM +LI+S ++ +LL+GWDGLG  SF L+  +           T + NR GD L I
Sbjct: 85   SFVASMGILILSGSIFTLLLGWDGLGLTSFALIAYYDNYNASSSAFLTLMTNRLGDVLII 144

Query: 412  LGLVFIXXXXXXXXXXXXXXV------LVLALMTKRALYPFNSWLPEAMAAPTPVSALVH 573
                 I              V        +A  TK A YPF++WLP AMAAPTPVSALVH
Sbjct: 145  ATFSVILVTGLTVHFPPYTLVWLSSILFTIASFTKSAQYPFSAWLPAAMAAPTPVSALVH 204

Query: 574  SSTLVVSGLYVLFRYF--DFLTVNILFFFTCIGLFTLYYRSFQALLAYDSKKLVAYSTLS 747
            SSTLV +G+Y++ R F  D     +      +G  T       AL  YD KK++A STLS
Sbjct: 205  SSTLVTAGIYLMIRCFMVDGAPAEMYSLMGLVGSITCLLGGSVALFEYDLKKVIALSTLS 264

Query: 748  QXXXXXXXXXXXXXXXXXXXXXVHAVFKASLFVSVGSYMVVGSHHQDMRYLSSVWFMNPX 927
            Q                      HA+FKA LF+  G  +++    QD+R L S+ + +P 
Sbjct: 265  QLGVMMYSLSLNLPYLALLHLYGHAMFKAMLFLGAGLILMMSYGTQDLRLLGSLLYSSPI 324

Query: 928  XXXXXXXXXXXXRGLPFFSCFFFKELVLSKIVNLN 1032
                         G PF S F+ K L+L K++++N
Sbjct: 325  VISLLNISMLCLMGFPFVSSFYSKHLILEKMLDMN 359

>sp|P34854|NU5M_ANOGA NADH-ubiquinone oxidoreductase chain 5 (NADH dehydrogenase subunit 5)
          Length = 580

 Score =  179 bits (454), Expect = 2e-44
 Identities = 112/336 (33%), Positives = 172/336 (51%), Gaps = 14/336 (4%)
 Frame = +1

Query: 58   FDLIRFNSLNFLNYILYFDFYSCLFFMILFSIVFCVYTFISYYFFLEVNLFRFIYLLNTF 237
            ++++   S++ +   L FD+ S +F   +  I   V  + + Y   + N+ RFI L+  F
Sbjct: 40   WEILSLQSMSIVMTFL-FDWMSLMFMSFVLLISSLVIFYSNQYMEEDYNINRFILLVLMF 98

Query: 238  ILSMVLLIVSPNLVSLLVGWDGLGFISFLLVC*FGXXXXXXXXLKTFLVNRFGDALFILG 417
            ++SM++LI+SPNL+S+L+GWDGLG +S+ LV  F         + T L NR GD   +L 
Sbjct: 99   VMSMMMLIISPNLISILLGWDGLGLVSYCLVIYFQNVKSYNAGMLTALSNRIGDVALLLA 158

Query: 418  LV------------FIXXXXXXXXXXXXXXVLVLALMTKRALYPFNSWLPEAMAAPTPVS 561
            +             ++              +++LA MTK A  PF+SWLP AMAAPTPVS
Sbjct: 159  IAWMLNYGSWNYIFYLDMMKNNIEMMIIGGLVMLAAMTKSAQIPFSSWLPAAMAAPTPVS 218

Query: 562  ALVHSSTLVVSGLYVLFRYFDFLTVN--ILFFFTCIGLFTLYYRSFQALLAYDSKKLVAY 735
            ALVHSSTLV +G+Y+L R+ D L +N  +  F   +   T++     A   +D KK++A 
Sbjct: 219  ALVHSSTLVTAGVYLLIRFNDVL-MNWWMAQFLLLVSGLTMFMAGLGANFEFDLKKIIAL 277

Query: 736  STLSQXXXXXXXXXXXXXXXXXXXXXVHAVFKASLFVSVGSYMVVGSHHQDMRYLSSVWF 915
            STLSQ                      HA+FKA LF+  GS +    + QD+R + S+  
Sbjct: 278  STLSQLGLMMSILSMGFYKLAFFHLLTHALFKALLFMCAGSIIHNMKNSQDIRMMGSLSM 337

Query: 916  MNPXXXXXXXXXXXXXRGLPFFSCFFFKELVLSKIV 1023
              P              G+PF + F+ K+L+L  ++
Sbjct: 338  SMPLTCSCFNVANLALCGMPFLAGFYSKDLILEMVM 373

>sp|P51899|NU5M_ANOAR NADH-ubiquinone oxidoreductase chain 5 (NADH dehydrogenase subunit 5)
          Length = 384

 Score =  179 bits (454), Expect = 2e-44
 Identities = 112/336 (33%), Positives = 172/336 (51%), Gaps = 14/336 (4%)
 Frame = +1

Query: 58   FDLIRFNSLNFLNYILYFDFYSCLFFMILFSIVFCVYTFISYYFFLEVNLFRFIYLLNTF 237
            ++++   S++ +   L FD+ S +F   +  I   V  + + Y   + N+ RFI L+  F
Sbjct: 40   WEILSLQSMSIVMTFL-FDWMSLMFMSFVLLISSLVIFYSNQYMEEDYNINRFILLVLMF 98

Query: 238  ILSMVLLIVSPNLVSLLVGWDGLGFISFLLVC*FGXXXXXXXXLKTFLVNRFGDALFILG 417
            ++SM++LI+SPNL+S+L+GWDGLG +S+ LV  F         + T L NR GD   +L 
Sbjct: 99   VMSMMMLIISPNLISILLGWDGLGLVSYCLVIYFQNVKSYNAGMLTALSNRIGDVALLLA 158

Query: 418  LV------------FIXXXXXXXXXXXXXXVLVLALMTKRALYPFNSWLPEAMAAPTPVS 561
            +             ++              +++LA MTK A  PF+SWLP AMAAPTPVS
Sbjct: 159  IAWMLNYGSWNYIFYLDMMKNNIEMMIIGGLVMLAAMTKSAQIPFSSWLPAAMAAPTPVS 218

Query: 562  ALVHSSTLVVSGLYVLFRYFDFLTVN--ILFFFTCIGLFTLYYRSFQALLAYDSKKLVAY 735
            ALVHSSTLV +G+Y+L R+ D L +N  +  F   +   T++     A   +D KK++A 
Sbjct: 219  ALVHSSTLVTAGVYLLIRFNDVL-MNWWMAQFLLLVSGLTMFMAGLGANFEFDLKKIIAL 277

Query: 736  STLSQXXXXXXXXXXXXXXXXXXXXXVHAVFKASLFVSVGSYMVVGSHHQDMRYLSSVWF 915
            STLSQ                      HA+FKA LF+  GS +    + QD+R + S+  
Sbjct: 278  STLSQLGLMMSILSMGFYKLAFFHLLTHALFKALLFMCAGSIIHNMKNSQDIRMMGSLSM 337

Query: 916  MNPXXXXXXXXXXXXXRGLPFFSCFFFKELVLSKIV 1023
              P              G+PF + F+ K+L+L  ++
Sbjct: 338  SMPLTCSCFNVANLALCGMPFLAGFYSKDLILEMVM 373

>sp|P33510|NU5M_ANOQU NADH-ubiquinone oxidoreductase chain 5 (NADH dehydrogenase subunit 5)
          Length = 576

 Score =  179 bits (453), Expect = 3e-44
 Identities = 116/334 (34%), Positives = 172/334 (51%), Gaps = 13/334 (3%)
 Frame = +1

Query: 73   FNSLNFLNYILYFDFYSCLFFMILFSIVFCVYTFISYYFFLEVNLFRFIYLLNTFILSMV 252
            F S++ +   L FD+ S +F   +  I   V  + + Y   + N+ RFI L+  F++SM+
Sbjct: 41   FKSMSIVMTFL-FDWMSLMFMSFVLLISSLVIFYSNQYMEEDYNINRFILLVLMFVMSMM 99

Query: 253  LLIVSPNLVSLLVGWDGLGFISFLLVC*FGXXXXXXXXLKTFLVNRFGDALFILGLV--- 423
            +LI+SPNL+S+L+GWDGLG +S+ LV  F         + T L NR GD   +L +    
Sbjct: 100  MLIISPNLISILLGWDGLGLVSYCLVIYFQNVKSYNAGMLTALSNRIGDVALLLAIAWML 159

Query: 424  ---------FIXXXXXXXXXXXXXXVLVLALMTKRALYPFNSWLPEAMAAPTPVSALVHS 576
                     ++              +++LA MTK A  PF+SWLP AMAAPTPVSALVHS
Sbjct: 160  NYGSWNYIFYLEMMSKNTEMMIIGGLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHS 219

Query: 577  STLVVSGLYVLFRYFDFLTVNIL-FFFTCIGLFTLYYRSFQALLAYDSKKLVAYSTLSQX 753
            STLV +GLY+L R+   LT   +  F   I   T++     A   +D KK++A STLSQ 
Sbjct: 220  STLVTAGLYLLIRFNILLTDWWMGQFMLLISGLTMFMAGLGANFEFDLKKIIALSTLSQL 279

Query: 754  XXXXXXXXXXXXXXXXXXXXVHAVFKASLFVSVGSYMVVGSHHQDMRYLSSVWFMNPXXX 933
                                 HA+FKA LF+  GS +    + QD+R + S+    P   
Sbjct: 280  GLMMSILSMGFYKLAFFHLLTHALFKALLFMCAGSIIHNMKNSQDIRMMGSLSMSMPLTC 339

Query: 934  XXXXXXXXXXRGLPFFSCFFFKELVLSKIVNLNF 1035
                       G+PF + F+ K+L+L ++V+L++
Sbjct: 340  SCFNVANLALCGMPFLAGFYSKDLIL-EMVSLSY 372

>sp|P07706|NU5M_DROYA NADH-ubiquinone oxidoreductase chain 5 (NADH dehydrogenase subunit 5)
          Length = 573

 Score =  178 bits (452), Expect = 3e-44
 Identities = 115/340 (33%), Positives = 172/340 (50%), Gaps = 15/340 (4%)
 Frame = +1

Query: 58   FDLIRFNSLNFLNYILYFDFYSCLFFMILFSIVFCVYTFISYYFFLEVNLFRFIYLLNTF 237
            ++++  NS++ +   L FD+ S LF   +  I   V  +   Y   + N+ RFI L+  F
Sbjct: 34   WEVVSLNSMSIVMTFL-FDWMSLLFMSFVLMIASLVIFYSKEYMESDENINRFIMLVLMF 92

Query: 238  ILSMVLLIVSPNLVSLLVGWDGLGFISFLLVC*FGXXXXXXXXLKTFLVNRFGDALFILG 417
            +LSM+LLI+SPNLVS+L+GWDGLG +S+ LV  F         + T L NR GD   +L 
Sbjct: 93   VLSMMLLIISPNLVSILLGWDGLGLVSYCLVIYFQNIKSYNAGMLTALSNRIGDVALLLA 152

Query: 418  LV------------FIXXXXXXXXXXXXXXVLVLALMTKRALYPFNSWLPEAMAAPTPVS 561
            +             ++              +++LA MTK A  PF+SWLP AMAAPTPVS
Sbjct: 153  IAWMLNYGSWNYIFYLEVMQNEFSMLMIGSLVMLAAMTKSAQIPFSSWLPAAMAAPTPVS 212

Query: 562  ALVHSSTLVVSGLYVLFRYFDFLTVNIL-FFFTCIGLFTLYYRSFQALLAYDSKKLVAYS 738
            ALVHSSTLV +G+Y+L R+   L+ + L      +   T++     A   +D KK++A S
Sbjct: 213  ALVHSSTLVTAGVYLLIRFNIVLSTSWLGQLLLLLSGLTMFMAGLGANFEFDLKKIIALS 272

Query: 739  TLSQXXXXXXXXXXXXXXXXXXXXXVHAVFKASLFVSVGSYMVVGSHHQDMRYLSSVWFM 918
            TLSQ                      HA+FKA LF+  G+ +   ++ QD+R +  +   
Sbjct: 273  TLSQLGLMMSILSMGFYKLAMFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLSIH 332

Query: 919  NPXXXXXXXXXXXXXRGLPFFSCFFFKELVLS--KIVNLN 1032
             P              G+PF + F+ K+++L    I N+N
Sbjct: 333  MPLTSACFNVSNLALCGMPFLAGFYSKDMILEIVSISNIN 372

>sp|Q36428|NU5M_LOCMI NADH-ubiquinone oxidoreductase chain 5 (NADH dehydrogenase subunit 5)
          Length = 572

 Score =  178 bits (452), Expect = 3e-44
 Identities = 113/326 (34%), Positives = 164/326 (50%), Gaps = 15/326 (4%)
 Frame = +1

Query: 79   SLNFLNYILYF--DFYSCLFFMILFSIVFCVYTFISYYFFLEVNLFRFIYLLNTFILSMV 252
            SLN    ++ F  D+ S +F   +  I   V  + + Y   E N+ RFI ++  FILSM 
Sbjct: 38   SLNSSMVVMTFIIDWMSLVFMSFVMYISSLVIYYSNDYMHNEKNINRFIMIVLMFILSMA 97

Query: 253  LLIVSPNLVSLLVGWDGLGFISFLLVC*FGXXXXXXXXLKTFLVNRFGDALFILGLVFIX 432
             LI+SPNL+S+L+GWDGLG +S+ LV  +         + T L NR GD   ++ + ++ 
Sbjct: 98   FLIISPNLISILLGWDGLGLVSYCLVIYYQNVKSYNAGMLTALSNRIGDVAILISISWML 157

Query: 433  XXXXXXXXXXXXXV------------LVLALMTKRALYPFNSWLPEAMAAPTPVSALVHS 576
                         +            ++LA MTK A  PF+SWLP AMAAPTPVSALVHS
Sbjct: 158  NFGSWNYIYYYYFISDSFEMKIITLLIILAAMTKSAQIPFSSWLPAAMAAPTPVSALVHS 217

Query: 577  STLVVSGLYVLFRYFDFLTV-NILFFFTCIGLFTLYYRSFQALLAYDSKKLVAYSTLSQX 753
            STLV +G+Y+L R+   L V +  ++   IG  T++     A   +D KK++A STLSQ 
Sbjct: 218  STLVTAGVYLLIRFNPMLMVYDFGWYILFIGCLTMFMSGLGANFEFDLKKIIALSTLSQL 277

Query: 754  XXXXXXXXXXXXXXXXXXXXVHAVFKASLFVSVGSYMVVGSHHQDMRYLSSVWFMNPXXX 933
                                 HA+FKA LF+  GS +      QD+R++ S+    P   
Sbjct: 278  GLMMSILSMGYSDLAFFHLLTHALFKALLFMCAGSMIHNLRDSQDIRFMGSIIHFMPLTS 337

Query: 934  XXXXXXXXXXRGLPFFSCFFFKELVL 1011
                       G+PF + F+ K+L+L
Sbjct: 338  ICFNVSSLCLCGMPFLAGFYSKDLIL 363

>sp|Q00232|NU5M_MYTED NADH-ubiquinone oxidoreductase chain 5 (NADH dehydrogenase subunit 5)
          Length = 568

 Score =  177 bits (448), Expect = 1e-43
 Identities = 117/322 (36%), Positives = 160/322 (49%), Gaps = 10/322 (3%)
 Frame = +1

Query: 76   NSLNFLNYILYFDFYSCLFFMILFSIVFCVYTFISYYFFLEVNLFRFIYLLNTFILSMVL 255
            N L+F ++    D  S +F   +  I   V T+  +Y   E+   RF+ L+  F+LSMV 
Sbjct: 40   NCLSF-SFSFLLDNVSMIFVGTVLVISGSVATYCKWYMAEELYYNRFMGLVWLFVLSMVF 98

Query: 256  LIVSPNLVSLLVGWDGLGFISFLLVC*FGXXXXXXXXLKTFLVNRFGDALFILGLV---- 423
            +I+ PNL+ LL+GWDGLG  SFLLV  +         + T L NR GD L ++ +     
Sbjct: 99   MILVPNLLMLLIGWDGLGLTSFLLVAYYQNNKSLSAAMLTALTNRIGDVLVLISISIFLS 158

Query: 424  ----FIXXXXXXXXXXXXXXVLVLALMTKRALYPFNSWLPEAMAAPTPVSALVHSSTLVV 591
                 I              ++V A MTK A  PF +WLP AMAAPTPVS+LVHSSTLV 
Sbjct: 159  EGGWLIYSYHPVQMWLNLGFMVVFAGMTKSAQMPFCAWLPAAMAAPTPVSSLVHSSTLVT 218

Query: 592  SGLYVLFRYFDFLTVN--ILFFFTCIGLFTLYYRSFQALLAYDSKKLVAYSTLSQXXXXX 765
            +G+Y++ R F  ++ N  +      + LFTL      A+ A+D KK++A STLSQ     
Sbjct: 219  AGVYLVLRSFYIISSNPYVTQVLMILSLFTLVLAGSSAVFAFDLKKVIALSTLSQLSLMM 278

Query: 766  XXXXXXXXXXXXXXXXVHAVFKASLFVSVGSYMVVGSHHQDMRYLSSVWFMNPXXXXXXX 945
                             HAVFKA LF+  G  +      QD+R LSS+W   P       
Sbjct: 279  FSISILLPSVAFFHLVTHAVFKALLFLGAGGVIHSNQSIQDIRGLSSLWQGLPVSMGAMS 338

Query: 946  XXXXXXRGLPFFSCFFFKELVL 1011
                   G PF S FF K+L++
Sbjct: 339  VAIVSLSGAPFMSGFFSKDLMI 360

>sp|P18932|NU5M_DROME NADH-ubiquinone oxidoreductase chain 5 (NADH dehydrogenase subunit 5)
          Length = 572

 Score =  177 bits (448), Expect = 1e-43
 Identities = 114/340 (33%), Positives = 172/340 (50%), Gaps = 15/340 (4%)
 Frame = +1

Query: 58   FDLIRFNSLNFLNYILYFDFYSCLFFMILFSIVFCVYTFISYYFFLEVNLFRFIYLLNTF 237
            ++L+  NS++ +   L FD+ S LF   +  I   V  +   Y   + ++ RFI L+  F
Sbjct: 34   WELVSLNSMSIVMTFL-FDWMSLLFMSFVLMISSLVIFYSKEYMMNDNHINRFIMLVLMF 92

Query: 238  ILSMVLLIVSPNLVSLLVGWDGLGFISFLLVC*FGXXXXXXXXLKTFLVNRFGDALFILG 417
            +LSM+LLI+SPNL+S+L+GWDGLG +S+ LV  F         + T L NR GD   +L 
Sbjct: 93   VLSMMLLIISPNLISILLGWDGLGLVSYCLVIYFQNIKSYNAGMLTALSNRIGDVALLLS 152

Query: 418  LV------------FIXXXXXXXXXXXXXXVLVLALMTKRALYPFNSWLPEAMAAPTPVS 561
            +             ++              +++LA MTK A  PF+SWLP AMAAPTPVS
Sbjct: 153  IAWMLNYGSWNYIFYLEIMQNEFEMLMIGSLVMLAAMTKSAQIPFSSWLPAAMAAPTPVS 212

Query: 562  ALVHSSTLVVSGLYVLFRYFDFLTVNIL-FFFTCIGLFTLYYRSFQALLAYDSKKLVAYS 738
            ALVHSSTLV +G+Y+L R+   L+ + L      +   T++     A   +D KK++A S
Sbjct: 213  ALVHSSTLVTAGVYLLIRFNIILSTSWLGQLMLLLSGLTMFMAGLGANFEFDLKKIIALS 272

Query: 739  TLSQXXXXXXXXXXXXXXXXXXXXXVHAVFKASLFVSVGSYMVVGSHHQDMRYLSSVWFM 918
            TLSQ                      HA+FKA LF+  G+ +   ++ QD+R +  +   
Sbjct: 273  TLSQLGLMMSILSMGFLKLAMFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLSIH 332

Query: 919  NPXXXXXXXXXXXXXRGLPFFSCFFFKELVLS--KIVNLN 1032
             P              G+PF + F+ K+++L    I N+N
Sbjct: 333  MPLTSACFNVSNLALCGMPFLAGFYSKDMILEIVSISNVN 372

>sp|Q9ZYM7|NU5M_RHISA NADH-ubiquinone oxidoreductase chain 5 (NADH dehydrogenase subunit 5)
          Length = 552

 Score =  174 bits (440), Expect = 8e-43
 Identities = 109/326 (33%), Positives = 164/326 (50%), Gaps = 8/326 (2%)
 Frame = +1

Query: 58   FDLIRFNSLNFLNYILYFDFYSCLFFMILFSIVFCVYTFISYYFFLEVNLFRFIYLLNTF 237
            ++L+   S  +  YIL  D+ SC+F   +  I   V  +   Y   + N   F +++  F
Sbjct: 34   YNLMSILSFEYKFYIL-LDWMSCMFSFTVLMISSMVLWYSHSYMSSDKNKTSFCWMVLMF 92

Query: 238  ILSMVLLIVSPNLVSLLVGWDGLGFISFLLVC*FGXXXXXXXXLKTFLVNRFGDALFILG 417
            ILSM+LL++ PN+  L++GWDGLG  S+ LV  +         + T + NR GD + I+ 
Sbjct: 93   ILSMLLLVLMPNVFMLILGWDGLGLTSYCLVIFYQSSNSYNSGMMTIISNRVGDVMVIMM 152

Query: 418  LVF------IXXXXXXXXXXXXXXVLVLALMTKRALYPFNSWLPEAMAAPTPVSALVHSS 579
            ++F                     ++++A +TK A  PF++WLP AMAAPTPVSALVHSS
Sbjct: 153  IIFAINFNSFELTSIKSFELIWGLLIIIAGLTKSAQIPFSAWLPAAMAAPTPVSALVHSS 212

Query: 580  TLVVSGLYVLFRYFDFLTVNILF--FFTCIGLFTLYYRSFQALLAYDSKKLVAYSTLSQX 753
            TLV +G+Y+L R FD L  N +F  F   I L T+      A    D KK++A+STLSQ 
Sbjct: 213  TLVTAGVYLLIR-FDLLFNNNIFSAFLMKISLMTMIMSGMNAFFENDLKKIIAFSTLSQL 271

Query: 754  XXXXXXXXXXXXXXXXXXXXVHAVFKASLFVSVGSYMVVGSHHQDMRYLSSVWFMNPXXX 933
                                VHA+FK+ LF+  G  +     +QD+R+LS  +  +P   
Sbjct: 272  SIMMLTLSLSLTNLSFFHLIVHAIFKSMLFLCAGFVIHNLMGNQDIRFLSDFFKFSPLIL 331

Query: 934  XXXXXXXXXXRGLPFFSCFFFKELVL 1011
                       G PF   F+ K++++
Sbjct: 332  SCMMIGMFSLMGFPFIGGFYSKDVIM 357

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,040,242
Number of Sequences: 369166
Number of extensions: 1376369
Number of successful extensions: 6025
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5586
length of database: 68,354,980
effective HSP length: 115
effective length of database: 47,110,455
effective search space used: 19126844730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00622

  1. Dr_sW_016_H17
  2. Dr_sW_019_A07
  3. Dr_sW_009_C20