Planarian EST Database

DrC_00610

Cluster detail
GO Category :
Consensus Sequence :
>DrC_00610 CTGGGGATAATGTCAGACGACAAAATGTTTTGGCTGCTCAAACAATTGCCAATATTGTTA AAACAAGCTTGGGTCCAGTTGGATTAGACAAAATGCTTGTTGATGATGTTGGTGAAGTTA CTATTAGTAATGATGGCGCAACTATATTAAAACTATTGGAAGTTGAACATCCTGCGGCCA AAATTCTAGTTGAATTAGCTCAGCTTCAAGATGAAGAAGTTGGTGATGGAACTACTTCAG TCGTTATAATTGCTGCTGAGTTACTAAAATTAGCAGAAGAACAAATCAAACAAAAAATTC ACCCTACAACTATAATTAGTGGCTACAGAATTGCATGCCGTGAAGCTTGTAAATACTTAC AGTCCAATTTAACAATCGATGTTGATAAGCTTGGTAAAGAATGTATCATAAATGCTGCTA AAACATCAATGTCTTCAAAGTTAATCGGATGTGATAGTGATTTTTTTGCTAATATGGCCG TTGATGCAACAATGGCGATAAGAGTATCTGATGGAAAAGGAGGTTTCAGATATCCCATTA AGGCTATCAATATCTTGAAAGCTCATGGAAAATCAATGAAAGAAAGCATGTTGATCCAAG GTTATGCTTTGAATTGTACCATCGCTTGTCAACAGATGCCAAGAACTATAAAAGGAGCTA AAATTGCTTTATTAGATTTCAACTTGCAAAAAACCAAATTGAAACTTGGCGTTCAAATTT TAGTTACCGATCCAGAAAAGTTAGATGAAATACGTAAGCGTGAAGCAGAAATTACCAAAG AAAAAATTGAAAAGATTTTGAAAACTGGTGCAAATGTAATTTTAACTACCGGTGGAATTG AGGATATGTGTATGAAATATTTTGTCGAAGCGAAAGCAATGGCCATAAGAAGATGTAAAA AAGTTGATTTAAAAAGAATTGCCAAAGCTACAGGAGGGGTGTTGGGGGTCAGTCTTGCCA CAATGGATGGAGATGAAGCTTTTGATCCAGCGTATCTCGGTTATGCTGAAGATGTTAGCC AAGAGAGAATATGCGATGAAGAATTGGTTCTTATTCGTGGTTGCAAAGCCAGATCAGCTG CCAGTGTTATATTACGAGGAGCTAATGACTTTTATGTTGATGAAATGGAAAGATCTTTAC ACGATTCTCTATGTGTTGTTAAGCGTG

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00610
         (1167 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q94757|TCPA_SCHMA  T-complex protein 1, alpha subunit (TC...   534   e-151
sp|Q9XT06|TCPA_MONDO  T-complex protein 1, alpha subunit (TC...   525   e-148
sp|P17987|TCPA_HUMAN  T-complex protein 1, alpha subunit (TC...   521   e-147
sp|P12613|TCPA_DROME  T-complex protein 1, alpha subunit (TC...   520   e-147
sp|P18279|TCPA_CRIGR  T-complex protein 1, alpha subunit (TC...   518   e-146
sp|Q9W790|TCPA_PALPA  T-complex protein 1, alpha subunit (TC...   518   e-146
sp|P28480|TCPA_RAT  T-complex protein 1, alpha subunit (TCP-...   514   e-145
sp|P11984|TCPA1_MOUSE  T-complex protein 1, alpha subunit A ...   512   e-145
sp|P11983|TCPA2_MOUSE  T-complex protein 1, alpha subunit B ...   510   e-144
sp|P41988|TCPA_CAEEL  T-complex protein 1, alpha subunit (TC...   499   e-141

>sp|Q94757|TCPA_SCHMA T-complex protein 1, alpha subunit (TCP-1-alpha) (CCT-alpha)
          Length = 545

 Score =  534 bits (1375), Expect = e-151
 Identities = 272/388 (70%), Positives = 318/388 (81%)
 Frame = +3

Query: 3    GDNVRRQNVLAAQTIANIVKTSLGPVGLDKMLVDDVGEVTISNDGATILKLLEVEHPAAK 182
            G++VR+QNVLAA + AN VKTSLGPVGLDKMLVDDVG+VTI+NDGATILKLL+VEHPAAK
Sbjct: 11   GESVRKQNVLAACSFANFVKTSLGPVGLDKMLVDDVGDVTITNDGATILKLLDVEHPAAK 70

Query: 183  ILVELAQLQDEEVGDGTTSVVIIAAELLKLAEEQIKQKIHPTTIISGYRIACREACKYLQ 362
            ILV+LAQLQDEEVGDGTTSVVI+AA LLK A+E I + +HPTT+I+GYR+ACREACKY+Q
Sbjct: 71   ILVQLAQLQDEEVGDGTTSVVILAAALLKNADELISRFVHPTTVINGYRLACREACKYIQ 130

Query: 363  SNLTIDVDKLGKECIINAAKTSMSSKLIGCDSDFFANMAVDATMAIRVSDGKGGFRYPIK 542
             ++  DV+KLGK  +IN A+T+MSSKLI  D+D F+ MAVDA MA+ VS G  G  YPIK
Sbjct: 131  EHMAYDVNKLGKAGLINVARTAMSSKLINLDADMFSQMAVDALMAVEVSGGPKGPVYPIK 190

Query: 543  AINILKAHGKSMKESMLIQGYALNCTIACQQMPRTIKGAKIALLDFNLQKTKLKLGVQIL 722
            A+NILKAHG+SM ESMLI GYALNCT A QQMPR IK AKIA LDF+LQK K+KLGVQ++
Sbjct: 191  AVNILKAHGRSMSESMLIDGYALNCTAASQQMPRIIKKAKIAFLDFSLQKVKMKLGVQVV 250

Query: 723  VTDPEKLDXXXXXXXXXXXXXXXXXXXXGANVILTTGGIEDMCMKYFVEAKAMAIRRCKK 902
            V DP +L+                    GANVILTTGGI+D+CMKYFVE  AMA+RRCKK
Sbjct: 251  VKDPAQLEAIRQREADITKERIQKILNAGANVILTTGGIDDLCMKYFVEVNAMAVRRCKK 310

Query: 903  VDLKRIAKATGGVLGVSLATMDGDEAFDPAYLGYAEDVSQERICDEELVLIRGCKARSAA 1082
            VDLK +AKATGG L VSLA M+GDE FDP  LG AE+VSQERICD+EL+++RG K   +A
Sbjct: 311  VDLKNMAKATGGQLIVSLADMEGDEVFDPTKLGNAEEVSQERICDDELIILRGPKVHPSA 370

Query: 1083 SVILRGANDFYVDEMERSLHDSLCVVKR 1166
            S+ILRGANDFYVDEMERSLHD+L VVKR
Sbjct: 371  SIILRGANDFYVDEMERSLHDALLVVKR 398

>sp|Q9XT06|TCPA_MONDO T-complex protein 1, alpha subunit (TCP-1-alpha) (CCT-alpha)
          Length = 557

 Score =  525 bits (1352), Expect = e-148
 Identities = 260/388 (67%), Positives = 321/388 (82%)
 Frame = +3

Query: 3    GDNVRRQNVLAAQTIANIVKTSLGPVGLDKMLVDDVGEVTISNDGATILKLLEVEHPAAK 182
            G+++R QNV+AA +IANIVK+SLGPVGLDKMLVDD+G+VTI+NDGATILKLLEVEHPAAK
Sbjct: 14   GESIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAK 73

Query: 183  ILVELAQLQDEEVGDGTTSVVIIAAELLKLAEEQIKQKIHPTTIISGYRIACREACKYLQ 362
            +L ELA LQD+EVGDGTTSVVIIAAELLK A+E +KQKIHPT+II GYR+AC+EA +Y+ 
Sbjct: 74   VLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSIIGGYRLACKEAVRYIN 133

Query: 363  SNLTIDVDKLGKECIINAAKTSMSSKLIGCDSDFFANMAVDATMAIRVSDGKGGFRYPIK 542
             NL I+ D+LGK+C+INAAKTSMSSK+IG D DFFANM VDA +A++ +D KG  RYP+ 
Sbjct: 134  ENLIINTDELGKDCLINAAKTSMSSKIIGIDGDFFANMVVDAVLAVKYTDVKGQPRYPVN 193

Query: 543  AINILKAHGKSMKESMLIQGYALNCTIACQQMPRTIKGAKIALLDFNLQKTKLKLGVQIL 722
            +IN+LKAHG+S KESMLI GYALNC +A Q MP+ I  AKIA LDF+LQKTK+KLGVQ++
Sbjct: 194  SINVLKAHGRSQKESMLINGYALNCVVASQGMPKRIVNAKIACLDFSLQKTKMKLGVQVV 253

Query: 723  VTDPEKLDXXXXXXXXXXXXXXXXXXXXGANVILTTGGIEDMCMKYFVEAKAMAIRRCKK 902
            +TDPEKLD                    GANVILTTGGI+DMC+KYFVE+  +A+RR  K
Sbjct: 254  ITDPEKLDQIRKREADITKERIQKILATGANVILTTGGIDDMCLKYFVESMTIAVRRVLK 313

Query: 903  VDLKRIAKATGGVLGVSLATMDGDEAFDPAYLGYAEDVSQERICDEELVLIRGCKARSAA 1082
             DLKRIAKA+G  +  +LA+++G+E+F+ + LG AE+V QERICD+EL+LI+  KAR++A
Sbjct: 314  RDLKRIAKASGATILSTLASLEGEESFEASMLGQAEEVVQERICDDELILIKNTKARTSA 373

Query: 1083 SVILRGANDFYVDEMERSLHDSLCVVKR 1166
            S+ILRGANDF  DEMERSLHD+LCVVKR
Sbjct: 374  SIILRGANDFMCDEMERSLHDALCVVKR 401

>sp|P17987|TCPA_HUMAN T-complex protein 1, alpha subunit (TCP-1-alpha) (CCT-alpha)
          Length = 556

 Score =  521 bits (1343), Expect = e-147
 Identities = 259/388 (66%), Positives = 318/388 (81%)
 Frame = +3

Query: 3    GDNVRRQNVLAAQTIANIVKTSLGPVGLDKMLVDDVGEVTISNDGATILKLLEVEHPAAK 182
            G+ +R QNV+AA +IANIVK+SLGPVGLDKMLVDD+G+VTI+NDGATILKLLEVEHPAAK
Sbjct: 14   GETIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAK 73

Query: 183  ILVELAQLQDEEVGDGTTSVVIIAAELLKLAEEQIKQKIHPTTIISGYRIACREACKYLQ 362
            +L ELA LQD+EVGDGTTSVVIIAAELLK A+E +KQKIHPT++ISGYR+AC+EA +Y+ 
Sbjct: 74   VLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYIN 133

Query: 363  SNLTIDVDKLGKECIINAAKTSMSSKLIGCDSDFFANMAVDATMAIRVSDGKGGFRYPIK 542
             NL ++ D+LG++C+INAAKTSMSSK+IG + DFFANM VDA +AI+ +D +G  RYP+ 
Sbjct: 134  ENLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTDIRGQPRYPVN 193

Query: 543  AINILKAHGKSMKESMLIQGYALNCTIACQQMPRTIKGAKIALLDFNLQKTKLKLGVQIL 722
            ++NILKAHG+S  ESMLI GYALNC +  Q MP+ I  AKIA LDF+LQKTK+KLGVQ++
Sbjct: 194  SVNILKAHGRSQMESMLISGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVV 253

Query: 723  VTDPEKLDXXXXXXXXXXXXXXXXXXXXGANVILTTGGIEDMCMKYFVEAKAMAIRRCKK 902
            +TDPEKLD                    GANVILTTGGI+DMC+KYFVEA AMA+RR  K
Sbjct: 254  ITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLK 313

Query: 903  VDLKRIAKATGGVLGVSLATMDGDEAFDPAYLGYAEDVSQERICDEELVLIRGCKARSAA 1082
             DLKRIAKA+G  +  +LA ++G+E F+ A LG AE+V QERICD+EL+LI+  KAR++A
Sbjct: 314  RDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDELILIKNTKARTSA 373

Query: 1083 SVILRGANDFYVDEMERSLHDSLCVVKR 1166
            S+ILRGANDF  DEMERSLHD+LCVVKR
Sbjct: 374  SIILRGANDFMCDEMERSLHDALCVVKR 401

>sp|P12613|TCPA_DROME T-complex protein 1, alpha subunit (TCP-1-alpha) (CCT-alpha)
          Length = 557

 Score =  520 bits (1339), Expect = e-147
 Identities = 257/388 (66%), Positives = 319/388 (82%)
 Frame = +3

Query: 3    GDNVRRQNVLAAQTIANIVKTSLGPVGLDKMLVDDVGEVTISNDGATILKLLEVEHPAAK 182
            G +VR QNV+AA +I+NIVK+SLGPVGLDKMLVDD+G+VT++NDGATIL+LLEVEHPAAK
Sbjct: 17   GASVRTQNVMAALSISNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEHPAAK 76

Query: 183  ILVELAQLQDEEVGDGTTSVVIIAAELLKLAEEQIKQKIHPTTIISGYRIACREACKYLQ 362
            +LVELAQLQDEEVGDGTTSVVI+AAELLK A+E +KQKIHPT+IISGYRIAC+EACKY+ 
Sbjct: 77   VLVELAQLQDEEVGDGTTSVVILAAELLKNADELVKQKIHPTSIISGYRIACKEACKYIS 136

Query: 363  SNLTIDVDKLGKECIINAAKTSMSSKLIGCDSDFFANMAVDATMAIRVSDGKGGFRYPIK 542
             +LT  VD+LG++ +IN AKTSMSSK+IG D++FF+ M VDA  +++++D +G   Y IK
Sbjct: 137  EHLTAPVDELGRDSLINIAKTSMSSKIIGADAEFFSAMVVDAAQSVKITDPRGQAAYSIK 196

Query: 543  AINILKAHGKSMKESMLIQGYALNCTIACQQMPRTIKGAKIALLDFNLQKTKLKLGVQIL 722
            AIN+LKAHGKS +ES+LI GYALNCTIA QQMP+ I  AKIA LDF+LQKTK+K+GVQ+L
Sbjct: 197  AINVLKAHGKSARESVLIPGYALNCTIASQQMPKKIVNAKIACLDFSLQKTKMKMGVQVL 256

Query: 723  VTDPEKLDXXXXXXXXXXXXXXXXXXXXGANVILTTGGIEDMCMKYFVEAKAMAIRRCKK 902
            + DP+KL+                    G NV+L +GG++D+CMKYFVEA AMA+RR KK
Sbjct: 257  INDPDKLEAIRARELDITKERINMILGTGVNVVLVSGGVDDLCMKYFVEAGAMAVRRVKK 316

Query: 903  VDLKRIAKATGGVLGVSLATMDGDEAFDPAYLGYAEDVSQERICDEELVLIRGCKARSAA 1082
             DLK IAKATG     SL  MDG+E+FD + +G A +V+QERICD+EL+LI+G KAR+AA
Sbjct: 317  SDLKIIAKATGAAFITSLTNMDGEESFDASMVGEAAEVAQERICDDELILIKGTKARAAA 376

Query: 1083 SVILRGANDFYVDEMERSLHDSLCVVKR 1166
            S+ILRG NDFY DEMERS+HD+LCVVKR
Sbjct: 377  SIILRGPNDFYCDEMERSVHDALCVVKR 404

>sp|P18279|TCPA_CRIGR T-complex protein 1, alpha subunit (TCP-1-alpha) (CCT-alpha) (65 kDa
            antigen)
          Length = 556

 Score =  518 bits (1334), Expect = e-146
 Identities = 258/388 (66%), Positives = 317/388 (81%)
 Frame = +3

Query: 3    GDNVRRQNVLAAQTIANIVKTSLGPVGLDKMLVDDVGEVTISNDGATILKLLEVEHPAAK 182
            G+ +R QNV+AA +IANIVK+SLGPVGLDKMLVDD+G+VTI+NDGATILKLLEVEHPAAK
Sbjct: 14   GEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAK 73

Query: 183  ILVELAQLQDEEVGDGTTSVVIIAAELLKLAEEQIKQKIHPTTIISGYRIACREACKYLQ 362
            +L ELA LQD+EVGDGTTSVVIIAAELLK A+E +KQKIHPT++ISGYR+AC+EA +Y+ 
Sbjct: 74   VLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYIS 133

Query: 363  SNLTIDVDKLGKECIINAAKTSMSSKLIGCDSDFFANMAVDATMAIRVSDGKGGFRYPIK 542
             NL I+ D+LG++C+INAAKTSMSSK+IG + DFFANM VDA +A++ +D +G  RYP+ 
Sbjct: 134  ENLIINTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAVKYTDLRGQPRYPVN 193

Query: 543  AINILKAHGKSMKESMLIQGYALNCTIACQQMPRTIKGAKIALLDFNLQKTKLKLGVQIL 722
            ++NILKAHG+S  ESMLI GYALNC +  Q MP+ I  AKIA LDF+LQKTK+KLGVQ++
Sbjct: 194  SVNILKAHGRSQVESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVV 253

Query: 723  VTDPEKLDXXXXXXXXXXXXXXXXXXXXGANVILTTGGIEDMCMKYFVEAKAMAIRRCKK 902
            +TDPEKLD                    GANVILTTGGI+DMC+KYFVEA AMA+RR  K
Sbjct: 254  ITDPEKLDQIRQRESDITKERIEKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLK 313

Query: 903  VDLKRIAKATGGVLGVSLATMDGDEAFDPAYLGYAEDVSQERICDEELVLIRGCKARSAA 1082
             DLKRIAKA+G  +  +LA ++G+E F+   LG AE+V QERICD+EL+LI+  KAR++A
Sbjct: 314  RDLKRIAKASGASILSTLANLEGEETFEATMLGQAEEVVQERICDDELILIKNTKARTSA 373

Query: 1083 SVILRGANDFYVDEMERSLHDSLCVVKR 1166
            S+ILRGANDF  DEMERSLHD+LCVVKR
Sbjct: 374  SIILRGANDFMCDEMERSLHDALCVVKR 401

>sp|Q9W790|TCPA_PALPA T-complex protein 1, alpha subunit (TCP-1-alpha) (CCT-alpha)
          Length = 559

 Score =  518 bits (1334), Expect = e-146
 Identities = 256/388 (65%), Positives = 317/388 (81%)
 Frame = +3

Query: 3    GDNVRRQNVLAAQTIANIVKTSLGPVGLDKMLVDDVGEVTISNDGATILKLLEVEHPAAK 182
            GD VR QNV AA TIANIVK+SLGPVGLDKMLVDD+G+VTI+NDGATILKLLEVEHPAAK
Sbjct: 17   GDTVRNQNVTAAATIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAK 76

Query: 183  ILVELAQLQDEEVGDGTTSVVIIAAELLKLAEEQIKQKIHPTTIISGYRIACREACKYLQ 362
            +L ELA+LQD+EVGDGTTSVVIIAAELLK ++E +KQKIHPT+II GYR+AC+EA +Y+ 
Sbjct: 77   VLCELAELQDKEVGDGTTSVVIIAAELLKNSDELVKQKIHPTSIIGGYRLACKEAVRYIN 136

Query: 363  SNLTIDVDKLGKECIINAAKTSMSSKLIGCDSDFFANMAVDATMAIRVSDGKGGFRYPIK 542
             NL I+ D+LG++C+IN+AKTSMSSK+IG D DFFA+M VDA  A++ +D KG  RYPI 
Sbjct: 137  ENLIINTDELGRDCLINSAKTSMSSKIIGIDGDFFASMVVDAASAVKYTDQKGQARYPIN 196

Query: 543  AINILKAHGKSMKESMLIQGYALNCTIACQQMPRTIKGAKIALLDFNLQKTKLKLGVQIL 722
            +IN+LKAHG+S KES+L+ GYALNC +  Q M + I  AKIA LDF+LQKTK+KLGVQ++
Sbjct: 197  SINVLKAHGRSQKESILVNGYALNCVVGSQGMTKRIVNAKIACLDFSLQKTKMKLGVQVV 256

Query: 723  VTDPEKLDXXXXXXXXXXXXXXXXXXXXGANVILTTGGIEDMCMKYFVEAKAMAIRRCKK 902
            +TDPEKLD                    GANVILTTGGI+DMC+KYFV+A AMA+RR  K
Sbjct: 257  ITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVDAGAMAVRRVLK 316

Query: 903  VDLKRIAKATGGVLGVSLATMDGDEAFDPAYLGYAEDVSQERICDEELVLIRGCKARSAA 1082
             DLKRIAKA+G  +  +LA ++G+E+F+ + LG AE+V QER+CD+EL+LI+  KAR++A
Sbjct: 317  KDLKRIAKASGATVCSTLANLEGEESFEASMLGQAEEVVQERVCDDELILIKNTKARTSA 376

Query: 1083 SVILRGANDFYVDEMERSLHDSLCVVKR 1166
            S+ILRGANDF  DEMERS+HD+LCVVKR
Sbjct: 377  SIILRGANDFMCDEMERSIHDALCVVKR 404

>sp|P28480|TCPA_RAT T-complex protein 1, alpha subunit (TCP-1-alpha) (CCT-alpha)
          Length = 556

 Score =  514 bits (1323), Expect = e-145
 Identities = 257/388 (66%), Positives = 316/388 (81%)
 Frame = +3

Query: 3    GDNVRRQNVLAAQTIANIVKTSLGPVGLDKMLVDDVGEVTISNDGATILKLLEVEHPAAK 182
            G+ +R QNV+AA +IANIVK+SLGPVGLDKMLVDD+G+VTI+NDGATILKLLEVEHPAAK
Sbjct: 14   GEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAK 73

Query: 183  ILVELAQLQDEEVGDGTTSVVIIAAELLKLAEEQIKQKIHPTTIISGYRIACREACKYLQ 362
            +L ELA LQD+EVGDGTTSVVIIAAELLK A+E +KQKIHPT++ISGYR+AC+EA +Y+ 
Sbjct: 74   VLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYIN 133

Query: 363  SNLTIDVDKLGKECIINAAKTSMSSKLIGCDSDFFANMAVDATMAIRVSDGKGGFRYPIK 542
             NL I+ D+LG++C+INAAKTSMSSK+IG + DFFANM VDA +A++ +D +G  RYP+ 
Sbjct: 134  ENLIINTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAVKYTDIRGQPRYPVN 193

Query: 543  AINILKAHGKSMKESMLIQGYALNCTIACQQMPRTIKGAKIALLDFNLQKTKLKLGVQIL 722
            ++NILKAHG+S  ESMLI GYALNC +  Q M + I  AKIA LDF+LQKTK+KLGVQ++
Sbjct: 194  SVNILKAHGRSQIESMLINGYALNCVVGSQGMLKRIVNAKIACLDFSLQKTKMKLGVQVV 253

Query: 723  VTDPEKLDXXXXXXXXXXXXXXXXXXXXGANVILTTGGIEDMCMKYFVEAKAMAIRRCKK 902
            +TDPEKLD                    GANVILTTGGI+DMC+KYFVEA AMA+RR  K
Sbjct: 254  ITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLK 313

Query: 903  VDLKRIAKATGGVLGVSLATMDGDEAFDPAYLGYAEDVSQERICDEELVLIRGCKARSAA 1082
             DLKRIAKA+G  +  +LA ++G+E F+   LG AE+V QERICD+EL+LI+  KAR++A
Sbjct: 314  RDLKRIAKASGASILSTLANLEGEETFEATMLGQAEEVVQERICDDELILIKNTKARTSA 373

Query: 1083 SVILRGANDFYVDEMERSLHDSLCVVKR 1166
            S+ILRGANDF  DEMERSLHD+LCVVKR
Sbjct: 374  SIILRGANDFMCDEMERSLHDALCVVKR 401

>sp|P11984|TCPA1_MOUSE T-complex protein 1, alpha subunit A (TCP-1-alpha) (CCT-alpha)
            (Tailless complex polypeptide 1A) (TCP-1-A)
          Length = 556

 Score =  512 bits (1318), Expect = e-145
 Identities = 254/388 (65%), Positives = 314/388 (80%)
 Frame = +3

Query: 3    GDNVRRQNVLAAQTIANIVKTSLGPVGLDKMLVDDVGEVTISNDGATILKLLEVEHPAAK 182
            G+ +R QNV+AA +IANIVK+SLGPVGLDKMLVDD+G+VTI+NDGATILKLLEVEHPAAK
Sbjct: 14   GEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAK 73

Query: 183  ILVELAQLQDEEVGDGTTSVVIIAAELLKLAEEQIKQKIHPTTIISGYRIACREACKYLQ 362
            +L ELA LQD+EVGDGTTSVVIIAAELLK A+E +KQKIHPT++ISGYR+AC+EA +Y+ 
Sbjct: 74   VLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYIN 133

Query: 363  SNLTIDVDKLGKECIINAAKTSMSSKLIGCDSDFFANMAVDATMAIRVSDGKGGFRYPIK 542
             NL I+ D+LG++C+ N AKTSMSSK+IG + D+FANM VDA +A++ +D +G  RYPI 
Sbjct: 134  ENLIINADELGRDCLTNTAKTSMSSKIIGINGDYFANMVVDAVLAVKYTDARGQPRYPIN 193

Query: 543  AINILKAHGKSMKESMLIQGYALNCTIACQQMPRTIKGAKIALLDFNLQKTKLKLGVQIL 722
            ++NILKAHG+S  ESMLI GYALNC +  Q MP+ I  AKIA LDF+LQKTK+KLGVQ++
Sbjct: 194  SVNILKAHGRSQIESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVV 253

Query: 723  VTDPEKLDXXXXXXXXXXXXXXXXXXXXGANVILTTGGIEDMCMKYFVEAKAMAIRRCKK 902
            +TDPEKLD                    GANVILTTGGI+DMC+KYFVEA AMA+RR  K
Sbjct: 254  ITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLK 313

Query: 903  VDLKRIAKATGGVLGVSLATMDGDEAFDPAYLGYAEDVSQERICDEELVLIRGCKARSAA 1082
             DLK +AKA+G  +  +LA ++G+E F+   LG AE+V QERICD+EL+LI+  KAR++A
Sbjct: 314  RDLKCVAKASGATILSTLANLEGEETFEVTMLGQAEEVVQERICDDELILIKNTKARTSA 373

Query: 1083 SVILRGANDFYVDEMERSLHDSLCVVKR 1166
            S+ILRGANDF  DEMERSLHD+LCVVKR
Sbjct: 374  SIILRGANDFMCDEMERSLHDALCVVKR 401

>sp|P11983|TCPA2_MOUSE T-complex protein 1, alpha subunit B (TCP-1-alpha) (CCT-alpha)
            (Tailless complex polypeptide 1B) (TCP-1-B)
          Length = 556

 Score =  510 bits (1313), Expect = e-144
 Identities = 254/388 (65%), Positives = 314/388 (80%)
 Frame = +3

Query: 3    GDNVRRQNVLAAQTIANIVKTSLGPVGLDKMLVDDVGEVTISNDGATILKLLEVEHPAAK 182
            G+ VR QNV+AA +IANIVK+S GPVGLDKMLVDD+G+VTI+NDGATILKLLEVEHPAAK
Sbjct: 14   GEAVRSQNVMAAASIANIVKSSFGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAK 73

Query: 183  ILVELAQLQDEEVGDGTTSVVIIAAELLKLAEEQIKQKIHPTTIISGYRIACREACKYLQ 362
            +L ELA LQD+EVGDGTTSVVIIAAELLK A+E +KQKIHPT++ISGYR+AC+EA +Y+ 
Sbjct: 74   VLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYIN 133

Query: 363  SNLTIDVDKLGKECIINAAKTSMSSKLIGCDSDFFANMAVDATMAIRVSDGKGGFRYPIK 542
             NL I+ D+LG++C+INAAKTSMSSK+IG + D+FANM VDA +A++ +D +G  RYP+ 
Sbjct: 134  ENLIINTDELGRDCLINAAKTSMSSKIIGINGDYFANMVVDAVLAVKYTDARGQPRYPVN 193

Query: 543  AINILKAHGKSMKESMLIQGYALNCTIACQQMPRTIKGAKIALLDFNLQKTKLKLGVQIL 722
            ++NILKAHG+S  ESMLI GYALNC +  Q MP+ I  AKIA LDF+LQKTK+KLGVQ++
Sbjct: 194  SVNILKAHGRSQIESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVV 253

Query: 723  VTDPEKLDXXXXXXXXXXXXXXXXXXXXGANVILTTGGIEDMCMKYFVEAKAMAIRRCKK 902
            +TDPEKLD                    GANVILTTGGI+DM +KYFVEA AMA+RR  K
Sbjct: 254  ITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMYLKYFVEAGAMAVRRVLK 313

Query: 903  VDLKRIAKATGGVLGVSLATMDGDEAFDPAYLGYAEDVSQERICDEELVLIRGCKARSAA 1082
             DLK +AKA+G  +  +LA ++G+E F+   LG AE+V QERICD+EL+LI+  KAR++A
Sbjct: 314  RDLKHVAKASGASILSTLANLEGEETFEVTMLGQAEEVVQERICDDELILIKNTKARTSA 373

Query: 1083 SVILRGANDFYVDEMERSLHDSLCVVKR 1166
            S+ILRGANDF  DEMERSLHD+LCVVKR
Sbjct: 374  SIILRGANDFMCDEMERSLHDALCVVKR 401

>sp|P41988|TCPA_CAEEL T-complex protein 1, alpha subunit (TCP-1-alpha) (CCT-alpha)
          Length = 549

 Score =  499 bits (1285), Expect = e-141
 Identities = 246/388 (63%), Positives = 310/388 (79%)
 Frame = +3

Query: 3    GDNVRRQNVLAAQTIANIVKTSLGPVGLDKMLVDDVGEVTISNDGATILKLLEVEHPAAK 182
            G  +R QNV AA  IANIVK+SLGPVGLDKMLVDDVG+V ++NDGATILK LEVEHPA K
Sbjct: 18   GQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGK 77

Query: 183  ILVELAQLQDEEVGDGTTSVVIIAAELLKLAEEQIKQKIHPTTIISGYRIACREACKYLQ 362
            +LVELAQLQDEEVGDGTTSVVI+AAELLK A+E +KQK+HPTTII+GYR+AC+EA KY+ 
Sbjct: 78   VLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYIS 137

Query: 363  SNLTIDVDKLGKECIINAAKTSMSSKLIGCDSDFFANMAVDATMAIRVSDGKGGFRYPIK 542
             N++   D +G++ ++NAAKTSMSSK+IG D+DFF  + VDA  A+RV +  G   YPI 
Sbjct: 138  ENISFTSDSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVRV-ENNGKVTYPIN 196

Query: 543  AINILKAHGKSMKESMLIQGYALNCTIACQQMPRTIKGAKIALLDFNLQKTKLKLGVQIL 722
            A+N+LKAHGKS +ES+L++GYALNCT+A Q MP  ++ AKIA LDF+L K K+ LG+ ++
Sbjct: 197  AVNVLKAHGKSARESVLVKGYALNCTVASQAMPLRVQNAKIACLDFSLMKAKMHLGISVV 256

Query: 723  VTDPEKLDXXXXXXXXXXXXXXXXXXXXGANVILTTGGIEDMCMKYFVEAKAMAIRRCKK 902
            V DP KL+                    GANV+LTTGGI+D+C+K FVE+ AMA+RRCKK
Sbjct: 257  VEDPAKLEAIRREEFDITKRRIDKILKAGANVVLTTGGIDDLCLKQFVESGAMAVRRCKK 316

Query: 903  VDLKRIAKATGGVLGVSLATMDGDEAFDPAYLGYAEDVSQERICDEELVLIRGCKARSAA 1082
             DLKRIAKATG  L VSLAT++GDEAFD + LG+A+++ QERI D+EL+LI+G K+R+A+
Sbjct: 317  SDLKRIAKATGATLTVSLATLEGDEAFDASLLGHADEIVQERISDDELILIKGPKSRTAS 376

Query: 1083 SVILRGANDFYVDEMERSLHDSLCVVKR 1166
            S+ILRGAND  +DEMERS+HDSLCVV+R
Sbjct: 377  SIILRGANDVMLDEMERSVHDSLCVVRR 404

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 122,610,875
Number of Sequences: 369166
Number of extensions: 2294062
Number of successful extensions: 7703
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7112
length of database: 68,354,980
effective HSP length: 113
effective length of database: 47,479,925
effective search space used: 13056979375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00610

Planaria EST Database

DrC_00610

BLASTX 2.2.13 [Nov-27-2005]

Cluster detail