Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_016_A21
(954 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9XT06|TCPA_MONDO T-complex protein 1, alpha subunit (TC... 413 e-115
sp|Q94757|TCPA_SCHMA T-complex protein 1, alpha subunit (TC... 410 e-114
sp|P17987|TCPA_HUMAN T-complex protein 1, alpha subunit (TC... 409 e-114
sp|P18279|TCPA_CRIGR T-complex protein 1, alpha subunit (TC... 408 e-113
sp|Q9W790|TCPA_PALPA T-complex protein 1, alpha subunit (TC... 407 e-113
sp|P12613|TCPA_DROME T-complex protein 1, alpha subunit (TC... 404 e-112
sp|P11984|TCPA1_MOUSE T-complex protein 1, alpha subunit A ... 404 e-112
sp|P28480|TCPA_RAT T-complex protein 1, alpha subunit (TCP-... 404 e-112
sp|P11983|TCPA2_MOUSE T-complex protein 1, alpha subunit B ... 402 e-112
sp|P41988|TCPA_CAEEL T-complex protein 1, alpha subunit (TC... 381 e-105
>sp|Q9XT06|TCPA_MONDO T-complex protein 1, alpha subunit (TCP-1-alpha) (CCT-alpha)
Length = 557
Score = 413 bits (1061), Expect = e-115
Identities = 206/308 (66%), Positives = 249/308 (80%)
Frame = +3
Query: 3 GDNVRRQNVLAAQTIANIVKTSLGPVGLDKMLVDDVGEVTISNDGATILKLLEVEHPAAK 182
G+++R QNV+AA +IANIVK+SLGPVGLDKMLVDD+G+VTI+NDGATILKLLEVEHPAAK
Sbjct: 14 GESIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAK 73
Query: 183 ILVELAQLQDEEVGDGTTSVVIIAAELLKLAEEQIKQKIHPTTIISGYRIACREACKYLQ 362
+L ELA LQD+EVGDGTTSVVIIAAELLK A+E +KQKIHPT+II GYR+AC+EA +Y+
Sbjct: 74 VLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSIIGGYRLACKEAVRYIN 133
Query: 363 SNLTIDVDKLGKECIINAAKTSMSSKLIGCDSDFFANMAVDATMAIRVSDGKGGFRYPIK 542
NL I+ D+LGK+C+INAAKTSMSSK+IG D DFFANM VDA +A++ +D KG RYP+
Sbjct: 134 ENLIINTDELGKDCLINAAKTSMSSKIIGIDGDFFANMVVDAVLAVKYTDVKGQPRYPVN 193
Query: 543 AINILKAHGKSMKESMLIQGYALNCTIACQQMPRTIKGAKIALLDFNLQKTKLKLGVQIL 722
+IN+LKAHG+S KESMLI GYALNC +A Q MP+ I AKIA LDF+LQKTK+KLGVQ++
Sbjct: 194 SINVLKAHGRSQKESMLINGYALNCVVASQGMPKRIVNAKIACLDFSLQKTKMKLGVQVV 253
Query: 723 VTDPEKLDXXXXXXXXXXXXXXXXXXXXGANVILTTGGIDDMCMKYFVEAKAMAIRRCKK 902
+TDPEKLD GANVILTTGGIDDMC+KYFVE+ +A+RR K
Sbjct: 254 ITDPEKLDQIRKREADITKERIQKILATGANVILTTGGIDDMCLKYFVESMTIAVRRVLK 313
Query: 903 LI*KELPK 926
K + K
Sbjct: 314 RDLKRIAK 321
>sp|Q94757|TCPA_SCHMA T-complex protein 1, alpha subunit (TCP-1-alpha) (CCT-alpha)
Length = 545
Score = 410 bits (1055), Expect = e-114
Identities = 210/308 (68%), Positives = 247/308 (80%)
Frame = +3
Query: 3 GDNVRRQNVLAAQTIANIVKTSLGPVGLDKMLVDDVGEVTISNDGATILKLLEVEHPAAK 182
G++VR+QNVLAA + AN VKTSLGPVGLDKMLVDDVG+VTI+NDGATILKLL+VEHPAAK
Sbjct: 11 GESVRKQNVLAACSFANFVKTSLGPVGLDKMLVDDVGDVTITNDGATILKLLDVEHPAAK 70
Query: 183 ILVELAQLQDEEVGDGTTSVVIIAAELLKLAEEQIKQKIHPTTIISGYRIACREACKYLQ 362
ILV+LAQLQDEEVGDGTTSVVI+AA LLK A+E I + +HPTT+I+GYR+ACREACKY+Q
Sbjct: 71 ILVQLAQLQDEEVGDGTTSVVILAAALLKNADELISRFVHPTTVINGYRLACREACKYIQ 130
Query: 363 SNLTIDVDKLGKECIINAAKTSMSSKLIGCDSDFFANMAVDATMAIRVSDGKGGFRYPIK 542
++ DV+KLGK +IN A+T+MSSKLI D+D F+ MAVDA MA+ VS G G YPIK
Sbjct: 131 EHMAYDVNKLGKAGLINVARTAMSSKLINLDADMFSQMAVDALMAVEVSGGPKGPVYPIK 190
Query: 543 AINILKAHGKSMKESMLIQGYALNCTIACQQMPRTIKGAKIALLDFNLQKTKLKLGVQIL 722
A+NILKAHG+SM ESMLI GYALNCT A QQMPR IK AKIA LDF+LQK K+KLGVQ++
Sbjct: 191 AVNILKAHGRSMSESMLIDGYALNCTAASQQMPRIIKKAKIAFLDFSLQKVKMKLGVQVV 250
Query: 723 VTDPEKLDXXXXXXXXXXXXXXXXXXXXGANVILTTGGIDDMCMKYFVEAKAMAIRRCKK 902
V DP +L+ GANVILTTGGIDD+CMKYFVE AMA+RRCKK
Sbjct: 251 VKDPAQLEAIRQREADITKERIQKILNAGANVILTTGGIDDLCMKYFVEVNAMAVRRCKK 310
Query: 903 LI*KELPK 926
+ K + K
Sbjct: 311 VDLKNMAK 318
>sp|P17987|TCPA_HUMAN T-complex protein 1, alpha subunit (TCP-1-alpha) (CCT-alpha)
Length = 556
Score = 409 bits (1051), Expect = e-114
Identities = 204/308 (66%), Positives = 248/308 (80%)
Frame = +3
Query: 3 GDNVRRQNVLAAQTIANIVKTSLGPVGLDKMLVDDVGEVTISNDGATILKLLEVEHPAAK 182
G+ +R QNV+AA +IANIVK+SLGPVGLDKMLVDD+G+VTI+NDGATILKLLEVEHPAAK
Sbjct: 14 GETIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAK 73
Query: 183 ILVELAQLQDEEVGDGTTSVVIIAAELLKLAEEQIKQKIHPTTIISGYRIACREACKYLQ 362
+L ELA LQD+EVGDGTTSVVIIAAELLK A+E +KQKIHPT++ISGYR+AC+EA +Y+
Sbjct: 74 VLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYIN 133
Query: 363 SNLTIDVDKLGKECIINAAKTSMSSKLIGCDSDFFANMAVDATMAIRVSDGKGGFRYPIK 542
NL ++ D+LG++C+INAAKTSMSSK+IG + DFFANM VDA +AI+ +D +G RYP+
Sbjct: 134 ENLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTDIRGQPRYPVN 193
Query: 543 AINILKAHGKSMKESMLIQGYALNCTIACQQMPRTIKGAKIALLDFNLQKTKLKLGVQIL 722
++NILKAHG+S ESMLI GYALNC + Q MP+ I AKIA LDF+LQKTK+KLGVQ++
Sbjct: 194 SVNILKAHGRSQMESMLISGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVV 253
Query: 723 VTDPEKLDXXXXXXXXXXXXXXXXXXXXGANVILTTGGIDDMCMKYFVEAKAMAIRRCKK 902
+TDPEKLD GANVILTTGGIDDMC+KYFVEA AMA+RR K
Sbjct: 254 ITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLK 313
Query: 903 LI*KELPK 926
K + K
Sbjct: 314 RDLKRIAK 321
>sp|P18279|TCPA_CRIGR T-complex protein 1, alpha subunit (TCP-1-alpha) (CCT-alpha) (65
kDa antigen)
Length = 556
Score = 408 bits (1048), Expect = e-113
Identities = 204/308 (66%), Positives = 248/308 (80%)
Frame = +3
Query: 3 GDNVRRQNVLAAQTIANIVKTSLGPVGLDKMLVDDVGEVTISNDGATILKLLEVEHPAAK 182
G+ +R QNV+AA +IANIVK+SLGPVGLDKMLVDD+G+VTI+NDGATILKLLEVEHPAAK
Sbjct: 14 GEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAK 73
Query: 183 ILVELAQLQDEEVGDGTTSVVIIAAELLKLAEEQIKQKIHPTTIISGYRIACREACKYLQ 362
+L ELA LQD+EVGDGTTSVVIIAAELLK A+E +KQKIHPT++ISGYR+AC+EA +Y+
Sbjct: 74 VLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYIS 133
Query: 363 SNLTIDVDKLGKECIINAAKTSMSSKLIGCDSDFFANMAVDATMAIRVSDGKGGFRYPIK 542
NL I+ D+LG++C+INAAKTSMSSK+IG + DFFANM VDA +A++ +D +G RYP+
Sbjct: 134 ENLIINTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAVKYTDLRGQPRYPVN 193
Query: 543 AINILKAHGKSMKESMLIQGYALNCTIACQQMPRTIKGAKIALLDFNLQKTKLKLGVQIL 722
++NILKAHG+S ESMLI GYALNC + Q MP+ I AKIA LDF+LQKTK+KLGVQ++
Sbjct: 194 SVNILKAHGRSQVESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVV 253
Query: 723 VTDPEKLDXXXXXXXXXXXXXXXXXXXXGANVILTTGGIDDMCMKYFVEAKAMAIRRCKK 902
+TDPEKLD GANVILTTGGIDDMC+KYFVEA AMA+RR K
Sbjct: 254 ITDPEKLDQIRQRESDITKERIEKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLK 313
Query: 903 LI*KELPK 926
K + K
Sbjct: 314 RDLKRIAK 321
>sp|Q9W790|TCPA_PALPA T-complex protein 1, alpha subunit (TCP-1-alpha) (CCT-alpha)
Length = 559
Score = 407 bits (1046), Expect = e-113
Identities = 204/308 (66%), Positives = 246/308 (79%)
Frame = +3
Query: 3 GDNVRRQNVLAAQTIANIVKTSLGPVGLDKMLVDDVGEVTISNDGATILKLLEVEHPAAK 182
GD VR QNV AA TIANIVK+SLGPVGLDKMLVDD+G+VTI+NDGATILKLLEVEHPAAK
Sbjct: 17 GDTVRNQNVTAAATIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAK 76
Query: 183 ILVELAQLQDEEVGDGTTSVVIIAAELLKLAEEQIKQKIHPTTIISGYRIACREACKYLQ 362
+L ELA+LQD+EVGDGTTSVVIIAAELLK ++E +KQKIHPT+II GYR+AC+EA +Y+
Sbjct: 77 VLCELAELQDKEVGDGTTSVVIIAAELLKNSDELVKQKIHPTSIIGGYRLACKEAVRYIN 136
Query: 363 SNLTIDVDKLGKECIINAAKTSMSSKLIGCDSDFFANMAVDATMAIRVSDGKGGFRYPIK 542
NL I+ D+LG++C+IN+AKTSMSSK+IG D DFFA+M VDA A++ +D KG RYPI
Sbjct: 137 ENLIINTDELGRDCLINSAKTSMSSKIIGIDGDFFASMVVDAASAVKYTDQKGQARYPIN 196
Query: 543 AINILKAHGKSMKESMLIQGYALNCTIACQQMPRTIKGAKIALLDFNLQKTKLKLGVQIL 722
+IN+LKAHG+S KES+L+ GYALNC + Q M + I AKIA LDF+LQKTK+KLGVQ++
Sbjct: 197 SINVLKAHGRSQKESILVNGYALNCVVGSQGMTKRIVNAKIACLDFSLQKTKMKLGVQVV 256
Query: 723 VTDPEKLDXXXXXXXXXXXXXXXXXXXXGANVILTTGGIDDMCMKYFVEAKAMAIRRCKK 902
+TDPEKLD GANVILTTGGIDDMC+KYFV+A AMA+RR K
Sbjct: 257 ITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVDAGAMAVRRVLK 316
Query: 903 LI*KELPK 926
K + K
Sbjct: 317 KDLKRIAK 324
>sp|P12613|TCPA_DROME T-complex protein 1, alpha subunit (TCP-1-alpha) (CCT-alpha)
Length = 557
Score = 404 bits (1038), Expect = e-112
Identities = 199/300 (66%), Positives = 247/300 (82%)
Frame = +3
Query: 3 GDNVRRQNVLAAQTIANIVKTSLGPVGLDKMLVDDVGEVTISNDGATILKLLEVEHPAAK 182
G +VR QNV+AA +I+NIVK+SLGPVGLDKMLVDD+G+VT++NDGATIL+LLEVEHPAAK
Sbjct: 17 GASVRTQNVMAALSISNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEHPAAK 76
Query: 183 ILVELAQLQDEEVGDGTTSVVIIAAELLKLAEEQIKQKIHPTTIISGYRIACREACKYLQ 362
+LVELAQLQDEEVGDGTTSVVI+AAELLK A+E +KQKIHPT+IISGYRIAC+EACKY+
Sbjct: 77 VLVELAQLQDEEVGDGTTSVVILAAELLKNADELVKQKIHPTSIISGYRIACKEACKYIS 136
Query: 363 SNLTIDVDKLGKECIINAAKTSMSSKLIGCDSDFFANMAVDATMAIRVSDGKGGFRYPIK 542
+LT VD+LG++ +IN AKTSMSSK+IG D++FF+ M VDA +++++D +G Y IK
Sbjct: 137 EHLTAPVDELGRDSLINIAKTSMSSKIIGADAEFFSAMVVDAAQSVKITDPRGQAAYSIK 196
Query: 543 AINILKAHGKSMKESMLIQGYALNCTIACQQMPRTIKGAKIALLDFNLQKTKLKLGVQIL 722
AIN+LKAHGKS +ES+LI GYALNCTIA QQMP+ I AKIA LDF+LQKTK+K+GVQ+L
Sbjct: 197 AINVLKAHGKSARESVLIPGYALNCTIASQQMPKKIVNAKIACLDFSLQKTKMKMGVQVL 256
Query: 723 VTDPEKLDXXXXXXXXXXXXXXXXXXXXGANVILTTGGIDDMCMKYFVEAKAMAIRRCKK 902
+ DP+KL+ G NV+L +GG+DD+CMKYFVEA AMA+RR KK
Sbjct: 257 INDPDKLEAIRARELDITKERINMILGTGVNVVLVSGGVDDLCMKYFVEAGAMAVRRVKK 316
>sp|P11984|TCPA1_MOUSE T-complex protein 1, alpha subunit A (TCP-1-alpha) (CCT-alpha)
(Tailless complex polypeptide 1A) (TCP-1-A)
Length = 556
Score = 404 bits (1038), Expect = e-112
Identities = 200/300 (66%), Positives = 243/300 (81%)
Frame = +3
Query: 3 GDNVRRQNVLAAQTIANIVKTSLGPVGLDKMLVDDVGEVTISNDGATILKLLEVEHPAAK 182
G+ +R QNV+AA +IANIVK+SLGPVGLDKMLVDD+G+VTI+NDGATILKLLEVEHPAAK
Sbjct: 14 GEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAK 73
Query: 183 ILVELAQLQDEEVGDGTTSVVIIAAELLKLAEEQIKQKIHPTTIISGYRIACREACKYLQ 362
+L ELA LQD+EVGDGTTSVVIIAAELLK A+E +KQKIHPT++ISGYR+AC+EA +Y+
Sbjct: 74 VLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYIN 133
Query: 363 SNLTIDVDKLGKECIINAAKTSMSSKLIGCDSDFFANMAVDATMAIRVSDGKGGFRYPIK 542
NL I+ D+LG++C+ N AKTSMSSK+IG + D+FANM VDA +A++ +D +G RYPI
Sbjct: 134 ENLIINADELGRDCLTNTAKTSMSSKIIGINGDYFANMVVDAVLAVKYTDARGQPRYPIN 193
Query: 543 AINILKAHGKSMKESMLIQGYALNCTIACQQMPRTIKGAKIALLDFNLQKTKLKLGVQIL 722
++NILKAHG+S ESMLI GYALNC + Q MP+ I AKIA LDF+LQKTK+KLGVQ++
Sbjct: 194 SVNILKAHGRSQIESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVV 253
Query: 723 VTDPEKLDXXXXXXXXXXXXXXXXXXXXGANVILTTGGIDDMCMKYFVEAKAMAIRRCKK 902
+TDPEKLD GANVILTTGGIDDMC+KYFVEA AMA+RR K
Sbjct: 254 ITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLK 313
>sp|P28480|TCPA_RAT T-complex protein 1, alpha subunit (TCP-1-alpha) (CCT-alpha)
Length = 556
Score = 404 bits (1037), Expect = e-112
Identities = 203/308 (65%), Positives = 247/308 (80%)
Frame = +3
Query: 3 GDNVRRQNVLAAQTIANIVKTSLGPVGLDKMLVDDVGEVTISNDGATILKLLEVEHPAAK 182
G+ +R QNV+AA +IANIVK+SLGPVGLDKMLVDD+G+VTI+NDGATILKLLEVEHPAAK
Sbjct: 14 GEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAK 73
Query: 183 ILVELAQLQDEEVGDGTTSVVIIAAELLKLAEEQIKQKIHPTTIISGYRIACREACKYLQ 362
+L ELA LQD+EVGDGTTSVVIIAAELLK A+E +KQKIHPT++ISGYR+AC+EA +Y+
Sbjct: 74 VLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYIN 133
Query: 363 SNLTIDVDKLGKECIINAAKTSMSSKLIGCDSDFFANMAVDATMAIRVSDGKGGFRYPIK 542
NL I+ D+LG++C+INAAKTSMSSK+IG + DFFANM VDA +A++ +D +G RYP+
Sbjct: 134 ENLIINTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAVKYTDIRGQPRYPVN 193
Query: 543 AINILKAHGKSMKESMLIQGYALNCTIACQQMPRTIKGAKIALLDFNLQKTKLKLGVQIL 722
++NILKAHG+S ESMLI GYALNC + Q M + I AKIA LDF+LQKTK+KLGVQ++
Sbjct: 194 SVNILKAHGRSQIESMLINGYALNCVVGSQGMLKRIVNAKIACLDFSLQKTKMKLGVQVV 253
Query: 723 VTDPEKLDXXXXXXXXXXXXXXXXXXXXGANVILTTGGIDDMCMKYFVEAKAMAIRRCKK 902
+TDPEKLD GANVILTTGGIDDMC+KYFVEA AMA+RR K
Sbjct: 254 ITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLK 313
Query: 903 LI*KELPK 926
K + K
Sbjct: 314 RDLKRIAK 321
>sp|P11983|TCPA2_MOUSE T-complex protein 1, alpha subunit B (TCP-1-alpha) (CCT-alpha)
(Tailless complex polypeptide 1B) (TCP-1-B)
Length = 556
Score = 402 bits (1033), Expect = e-112
Identities = 202/308 (65%), Positives = 246/308 (79%)
Frame = +3
Query: 3 GDNVRRQNVLAAQTIANIVKTSLGPVGLDKMLVDDVGEVTISNDGATILKLLEVEHPAAK 182
G+ VR QNV+AA +IANIVK+S GPVGLDKMLVDD+G+VTI+NDGATILKLLEVEHPAAK
Sbjct: 14 GEAVRSQNVMAAASIANIVKSSFGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAK 73
Query: 183 ILVELAQLQDEEVGDGTTSVVIIAAELLKLAEEQIKQKIHPTTIISGYRIACREACKYLQ 362
+L ELA LQD+EVGDGTTSVVIIAAELLK A+E +KQKIHPT++ISGYR+AC+EA +Y+
Sbjct: 74 VLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYIN 133
Query: 363 SNLTIDVDKLGKECIINAAKTSMSSKLIGCDSDFFANMAVDATMAIRVSDGKGGFRYPIK 542
NL I+ D+LG++C+INAAKTSMSSK+IG + D+FANM VDA +A++ +D +G RYP+
Sbjct: 134 ENLIINTDELGRDCLINAAKTSMSSKIIGINGDYFANMVVDAVLAVKYTDARGQPRYPVN 193
Query: 543 AINILKAHGKSMKESMLIQGYALNCTIACQQMPRTIKGAKIALLDFNLQKTKLKLGVQIL 722
++NILKAHG+S ESMLI GYALNC + Q MP+ I AKIA LDF+LQKTK+KLGVQ++
Sbjct: 194 SVNILKAHGRSQIESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVV 253
Query: 723 VTDPEKLDXXXXXXXXXXXXXXXXXXXXGANVILTTGGIDDMCMKYFVEAKAMAIRRCKK 902
+TDPEKLD GANVILTTGGIDDM +KYFVEA AMA+RR K
Sbjct: 254 ITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMYLKYFVEAGAMAVRRVLK 313
Query: 903 LI*KELPK 926
K + K
Sbjct: 314 RDLKHVAK 321
>sp|P41988|TCPA_CAEEL T-complex protein 1, alpha subunit (TCP-1-alpha) (CCT-alpha)
Length = 549
Score = 381 bits (979), Expect = e-105
Identities = 189/308 (61%), Positives = 236/308 (76%)
Frame = +3
Query: 3 GDNVRRQNVLAAQTIANIVKTSLGPVGLDKMLVDDVGEVTISNDGATILKLLEVEHPAAK 182
G +R QNV AA IANIVK+SLGPVGLDKMLVDDVG+V ++NDGATILK LEVEHPA K
Sbjct: 18 GQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGK 77
Query: 183 ILVELAQLQDEEVGDGTTSVVIIAAELLKLAEEQIKQKIHPTTIISGYRIACREACKYLQ 362
+LVELAQLQDEEVGDGTTSVVI+AAELLK A+E +KQK+HPTTII+GYR+AC+EA KY+
Sbjct: 78 VLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYIS 137
Query: 363 SNLTIDVDKLGKECIINAAKTSMSSKLIGCDSDFFANMAVDATMAIRVSDGKGGFRYPIK 542
N++ D +G++ ++NAAKTSMSSK+IG D+DFF + VDA A+RV + G YPI
Sbjct: 138 ENISFTSDSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVRV-ENNGKVTYPIN 196
Query: 543 AINILKAHGKSMKESMLIQGYALNCTIACQQMPRTIKGAKIALLDFNLQKTKLKLGVQIL 722
A+N+LKAHGKS +ES+L++GYALNCT+A Q MP ++ AKIA LDF+L K K+ LG+ ++
Sbjct: 197 AVNVLKAHGKSARESVLVKGYALNCTVASQAMPLRVQNAKIACLDFSLMKAKMHLGISVV 256
Query: 723 VTDPEKLDXXXXXXXXXXXXXXXXXXXXGANVILTTGGIDDMCMKYFVEAKAMAIRRCKK 902
V DP KL+ GANV+LTTGGIDD+C+K FVE+ AMA+RRCKK
Sbjct: 257 VEDPAKLEAIRREEFDITKRRIDKILKAGANVVLTTGGIDDLCLKQFVESGAMAVRRCKK 316
Query: 903 LI*KELPK 926
K + K
Sbjct: 317 SDLKRIAK 324
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,748,227
Number of Sequences: 369166
Number of extensions: 1742195
Number of successful extensions: 5666
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5187
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 9856975370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)