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Planaria EST Database

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00605
         (1072 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P06680|PRPH_MESAU  Acidic proline-rich protein HP43A prec...    53   1e-06
sp|Q9LKA5|UMP1_ARATH  Unknown mitochondrial protein At3g15000      52   4e-06
sp|Q49378|P32_MYCGA  P32 adhesin (Cytadhesin P32)                  50   1e-05
sp|Q9V9W8|PYGO_DROME  Pygopus protein (Gammy legs protein)         45   5e-04
sp|Q01443|SSP2_PLAYO  Sporozoite surface protein 2 precursor       45   5e-04
sp|P25439|BRM_DROME  Homeotic gene regulator (Brahma protein)      44   8e-04
sp|Q62280|SSXT_MOUSE  SSXT protein (SYT protein) (Synovial s...    43   0.002
sp|Q7UZZ9|IF2_PROMP  Translation initiation factor IF-2            42   0.002
sp|Q6P1E1|ZIM10_MOUSE  Retinoic acid-induced protein 17 (PIA...    42   0.002
sp|Q15532|SSXT_HUMAN  SSXT protein (Synovial sarcoma, transl...    42   0.004

>sp|P06680|PRPH_MESAU Acidic proline-rich protein HP43A precursor
          Length = 183

 Score = 53.1 bits (126), Expect = 1e-06
 Identities = 54/187 (28%), Positives = 65/187 (34%), Gaps = 5/187 (2%)
 Frame = +3

Query: 18  STDQVRISQEIQSDPNEIH-RPSPVKNQIPSGYVNVNQPPIQSSINSTLPVVSSNMPYSM 194
           S  Q+   ++   DP ++H RP     Q PS          +   N+         P   
Sbjct: 21  SISQLSEEEQQGQDPGQLHQRPGQFPPQ-PSASDEEGDDDGEEDGNAP-----EGPPQQG 74

Query: 195 GNHNAPNKNIPGNMCAPNMPPSHIGQNLPNQNMVPNIGGQNMPPNIGGQNMPPNIGG--Q 368
           G+H  P    PGN   P   P   GQ             QN PP  G Q  PP   G  Q
Sbjct: 75  GDHQKPRPPKPGNQQGP---PQQEGQQ------------QNRPPKPGNQEGPPQQEGQQQ 119

Query: 369 NMPPNIGGQNMLPNISSQSIGSQNMPMNAGGQNMPMNAGG--QNMPMNVGGQNMPMNVGG 542
           N PP  G Q   P    Q    QN P   G Q  P    G  QN P   G Q  P   G 
Sbjct: 120 NRPPKPGNQEGPPQQEGQ---QQNRPPKPGNQEGPPQQEGQQQNRPPKPGNQEGPPQQGS 176

Query: 543 QNMSMNV 563
           +  S ++
Sbjct: 177 EEQSTSL 183

>sp|Q9LKA5|UMP1_ARATH Unknown mitochondrial protein At3g15000
          Length = 395

 Score = 51.6 bits (122), Expect = 4e-06
 Identities = 37/93 (39%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
 Frame = +3

Query: 297 PNIGGQNMPPNIGGQ-NMPPNIGGQNMPPNIGGQNMLPNISSQSIGSQN-MPMNAGGQNM 470
           P +GG   PP+IGG    PP++GG   PP   GQN  P   +   G ++  P  A  QN 
Sbjct: 246 PPMGGPPPPPHIGGSAPPPPHMGGSAPPPPHMGQNYGPPPPNNMGGPRHPPPYGAPPQN- 304

Query: 471 PMNAGGQNMPMNVGGQNMPMNVGGQNMSMNVGG 569
             N GG   P N GG   P N GG   + N+GG
Sbjct: 305 --NMGGPRPPQNYGG-TPPPNYGGAPPANNMGG 334

 Score = 38.9 bits (89), Expect = 0.025
 Identities = 35/110 (31%), Positives = 42/110 (38%), Gaps = 13/110 (11%)
 Frame = +3

Query: 252 PPSHIGQNLPNQNMVPNIGGQNMPP-------------NIGGQNMPPNIGGQNMPPNIGG 392
           PP HIG + P     P++GG   PP             N+GG   PP  G    PP    
Sbjct: 253 PPPHIGGSAPPP---PHMGGSAPPPPHMGQNYGPPPPNNMGGPRHPPPYGA---PP---- 302

Query: 393 QNMLPNISSQSIGSQNMPMNAGGQNMPMNAGGQNMPMNVGGQNMPMNVGG 542
                     ++G    P N GG   P N GG     N+GG   P N GG
Sbjct: 303 --------QNNMGGPRPPQNYGG-TPPPNYGGAPPANNMGGA-PPPNYGG 342

 Score = 37.7 bits (86), Expect = 0.056
 Identities = 41/138 (29%), Positives = 51/138 (36%), Gaps = 5/138 (3%)
 Frame = +3

Query: 102 PSGYVNVNQPPIQSSINSTLPVVSSNM--PYSMGNHNAPNKNIPGNMCAPNMPPSHIGQN 275
           P  ++  + PP      +  P   +NM  P     + AP +N   NM  P  P ++ G  
Sbjct: 263 PPPHMGGSAPPPPHMGQNYGPPPPNNMGGPRHPPPYGAPPQN---NMGGPRPPQNYGGTP 319

Query: 276 LPNQNMVP---NIGGQNMPPNIGGQNMPPNIGGQNMPPNIGGQNMLPNISSQSIGSQNMP 446
            PN    P   N+GG   PPN GG   PP   G   PP  GG     N   Q       P
Sbjct: 320 PPNYGGAPPANNMGGA-PPPNYGGG--PPPQYGAVPPPQYGGAPPQNNNYQQQGSGMQQP 376

Query: 447 MNAGGQNMPMNAGGQNMP 500
                 N P N  G   P
Sbjct: 377 QYQ--NNYPPNRDGSGNP 392

>sp|Q49378|P32_MYCGA P32 adhesin (Cytadhesin P32)
          Length = 294

 Score = 50.1 bits (118), Expect = 1e-05
 Identities = 49/159 (30%), Positives = 65/159 (40%), Gaps = 8/159 (5%)
 Frame = +3

Query: 102 PSGYVNVNQPPIQSSIN-STLPVVSSNMPYSMGNHNA-PNKNIPGNMCAPNMPPSHIGQN 275
           P+  VN  +P   + +N +  P +  N P         P + I        M P+ +G  
Sbjct: 124 PTEEVNTQEPTQPAGVNVANNPQMGINQPQINPQFGPNPQQRINPQCFGGPMQPNQMGMR 183

Query: 276 LPNQNMVPNIGGQNMPPNIGGQN-----MPPNIGGQNMPPNIGGQNMLPNISSQSIGSQN 440
                M P +GG  MPPN  G       MPP +GG  MPP     N +PN++    G + 
Sbjct: 184 PGFNQMPPQMGG--MPPNQMGMRPGFNQMPPQMGG--MPPRPNFPNQMPNMNQPRPGFR- 238

Query: 441 MPMNAGGQNMPMNAGGQ-NMPMNVGGQNMPMNVGGQNMS 554
            P   GG  M   AGG  N P    G N  MN   Q M+
Sbjct: 239 -PQPGGGVPMGNKAGGGFNHPGTPMGPNR-MNFPNQGMN 275

 Score = 38.5 bits (88), Expect = 0.033
 Identities = 44/171 (25%), Positives = 63/171 (36%), Gaps = 6/171 (3%)
 Frame = +3

Query: 21  TDQVRISQEIQSDPNEIHRPSPVKNQIPSGYVNVNQPPIQSSINSTLPVVSSNMPYSMGN 200
           T+ +  ++E+ +   E  +P+ V N   +  + +NQP I        P    N P   G 
Sbjct: 119 TEAIEPTEEVNTQ--EPTQPAGV-NVANNPQMGINQPQINPQFGPN-PQQRIN-PQCFGG 173

Query: 201 HNAPNKN--IPG-NMCAPNM---PPSHIGQNLPNQNMVPNIGGQNMPPNIGGQNMPPNIG 362
              PN+    PG N   P M   PP+ +G       M P +GG    PN   Q    N  
Sbjct: 174 PMQPNQMGMRPGFNQMPPQMGGMPPNQMGMRPGFNQMPPQMGGMPPRPNFPNQMPNMNQP 233

Query: 363 GQNMPPNIGGQNMLPNISSQSIGSQNMPMNAGGQNMPMNAGGQNMPMNVGG 515
                P  GG   + N +         PM     N P    G N P ++ G
Sbjct: 234 RPGFRPQPGGGVPMGNKAGGGFNHPGTPMGPNRMNFPNQ--GMNQPPHMAG 282

 Score = 32.7 bits (73), Expect = 1.8
 Identities = 30/109 (27%), Positives = 36/109 (33%), Gaps = 6/109 (5%)
 Frame = +3

Query: 252 PPSHIGQNLPNQNMVPNIGGQNMPPNIGGQNMPPNIGG---QNMPPNIGGQNMLPNISSQ 422
           P   +    P Q    N+   N    I    + P  G    Q + P   G  M PN    
Sbjct: 124 PTEEVNTQEPTQPAGVNVAN-NPQMGINQPQINPQFGPNPQQRINPQCFGGPMQPNQMGM 182

Query: 423 SIGSQNMPMNAGGQ---NMPMNAGGQNMPMNVGGQNMPMNVGGQNMSMN 560
             G   MP   GG     M M  G   MP  +GG     N   Q  +MN
Sbjct: 183 RPGFNQMPPQMGGMPPNQMGMRPGFNQMPPQMGGMPPRPNFPNQMPNMN 231

>sp|Q9V9W8|PYGO_DROME Pygopus protein (Gammy legs protein)
          Length = 815

 Score = 44.7 bits (104), Expect = 5e-04
 Identities = 54/180 (30%), Positives = 73/180 (40%), Gaps = 15/180 (8%)
 Frame = +3

Query: 72   HRPSPVKNQIPSGYVNVNQPPIQSSINSTLPVVSSNMPYSMGNH-NAPNKNI---PGNMC 239
            H P P+    P   +N   PP Q S          N P+   +H   P  ++   PG   
Sbjct: 553  HGPGPM----PGMGMNQMLPPQQPSHLGPPHPNMMNHPHHPHHHPGGPPPHMMGGPGMHG 608

Query: 240  APNMPPSHIGQNLPNQNMVPNIGGQNMPPNIGGQNMP------PNIGGQNMPPN--IGGQ 395
             P   P H+G   PN +M+    G N  P++G  +M       P  GG N PP+  +   
Sbjct: 609  GPAGMPPHMGGG-PNPHMMGGPHG-NAGPHMGHGHMGGVPGPGPGPGGMNGPPHPHMSPH 666

Query: 396  NMLPNISSQSIGSQNMPMNAGGQNMPMNAGGQ--NM-PMNVGGQNMPMNVGGQNMSMNVG 566
            +  P+     +G     M  GG   PM  GG   NM PM  G    PM VG + M+M  G
Sbjct: 667  HGHPHHHHNPMGGPGPNMFGGGGGGPMGPGGPMGNMGPMGGGPMGGPMGVGPKPMTMGGG 726

 Score = 40.8 bits (94), Expect = 0.007
 Identities = 35/125 (28%), Positives = 48/125 (38%), Gaps = 11/125 (8%)
 Frame = +3

Query: 192 MGNHNAPNKNIPGNMCAPNMPPSHIGQNLPNQNM-VPNIGGQNMPPNIGGQNMP------ 350
           MG+ + P+ ++ G      M P H  Q  P   + +P       P   GG   P      
Sbjct: 171 MGHPHGPHPHMGGPPPMRGMSPMHPHQMGPGPGVGLPPHMNHGRPGGPGGPGGPVPMGSP 230

Query: 351 ----PNIGGQNMPPNIGGQNMLPNISSQSIGSQNMPMNAGGQNMPMNAGGQNMPMNVGGQ 518
                 +GG +    +GG    P+IS   +G   +    GG N P     Q  PM   GQ
Sbjct: 231 MGGIAGMGGMSPMGGMGG----PSISPHHMGMGGLSPMGGGPNGPNPRAMQGSPMGGPGQ 286

Query: 519 NMPMN 533
           N PMN
Sbjct: 287 NSPMN 291

 Score = 40.0 bits (92), Expect = 0.011
 Identities = 41/130 (31%), Positives = 55/130 (42%), Gaps = 4/130 (3%)
 Frame = +3

Query: 174 SNMPYSMGNHNAPNKNI---PGNMCAPNMPPSHIGQNLPNQNMVPNIGGQNMPPNIGGQN 344
           + MP  MG    PN ++   P     P+M   H+G  +P     P  GG N PP+    +
Sbjct: 611 AGMPPHMGG--GPNPHMMGGPHGNAGPHMGHGHMG-GVPGPG--PGPGGMNGPPH---PH 662

Query: 345 MPPNIGGQNMPPN-IGGQNMLPNISSQSIGSQNMPMNAGGQNMPMNAGGQNMPMNVGGQN 521
           M P+ G  +   N +GG    PN+     G    P    G   PM  G    PM VG + 
Sbjct: 663 MSPHHGHPHHHHNPMGGPG--PNMFGGGGGGPMGPGGPMGNMGPMGGGPMGGPMGVGPK- 719

Query: 522 MPMNVGGQNM 551
            PM +GG  M
Sbjct: 720 -PMTMGGGKM 728

>sp|Q01443|SSP2_PLAYO Sporozoite surface protein 2 precursor
          Length = 827

 Score = 44.7 bits (104), Expect = 5e-04
 Identities = 47/164 (28%), Positives = 57/164 (34%), Gaps = 7/164 (4%)
 Frame = +3

Query: 57  DPNEIHRPSPVKNQIPSGYVNVNQPPIQSSINSTLPVVSSNMPYSMGNHNAPNK-NIPGN 233
           D  +I  P  + N+IP    N  +P   +  N      + N P +  N N PN  N P N
Sbjct: 279 DCPQIPIPPVIPNKIPEKPSNPEEPVNPNDPNDPNNPNNPNNPNNPNNPNNPNNPNNPNN 338

Query: 234 MCAPNMPPSHIGQNLPNQNMVPNIGGQNMPPNIGGQNMPPNIGGQNMPPNIGGQNMLPNI 413
              PN P +    N PN    PN    N P N    N P N    N P N    N  P  
Sbjct: 339 PNNPNNPNNPNNPNNPNNPNNPN--NPNNPNNPNNPNNPNNPNNPNDPSNPNNPN--PKK 394

Query: 414 SSQSIGSQNMPM------NAGGQNMPMNAGGQNMPMNVGGQNMP 527
            +    + N P       N    N P N    N P      N P
Sbjct: 395 RNPKRRNPNKPKPNKPNPNKPNPNEPSNPNKPN-PNEPSNPNKP 437

 Score = 41.2 bits (95), Expect = 0.005
 Identities = 44/173 (25%), Positives = 60/173 (34%), Gaps = 4/173 (2%)
 Frame = +3

Query: 54  SDPNEIHRPSPVKNQIPSGYVNVNQPPIQSSINSTLPVVSSNMPYSMGNHNAPNKNIPGN 233
           ++PN  + P+   N  P+   N N P   S+ N+  P   +       N N P  N P  
Sbjct: 358 NNPNNPNNPNNPNN--PNNPNNPNNPNDPSNPNNPNPKKRNP---KRRNPNKPKPNKPN- 411

Query: 234 MCAPNMP----PSHIGQNLPNQNMVPNIGGQNMPPNIGGQNMPPNIGGQNMPPNIGGQNM 401
              PN P    PS+  +  PN+   PN    N P N       PN    N P N    N 
Sbjct: 412 ---PNKPNPNEPSNPNKPNPNEPSNPNKPNPNEPSN-------PNKPNPNEPSNPNKPNP 461

Query: 402 LPNISSQSIGSQNMPMNAGGQNMPMNAGGQNMPMNVGGQNMPMNVGGQNMSMN 560
              ++     + N P N    + P      N P N    + P      N   N
Sbjct: 462 NEPLNPNEPSNPNEPSNPNAPSNPNEPSNPNEPSNPNEPSNPNEPSNPNEPSN 514

 Score = 39.3 bits (90), Expect = 0.019
 Identities = 44/168 (26%), Positives = 56/168 (33%)
 Frame = +3

Query: 57  DPNEIHRPSPVKNQIPSGYVNVNQPPIQSSINSTLPVVSSNMPYSMGNHNAPNKNIPGNM 236
           +PNE   P+      PS   N N+P      N   P      P    N N PN N P N 
Sbjct: 416 NPNEPSNPNKPNPNEPS---NPNKPNPNEPSNPNKP-----NPNEPSNPNKPNPNEPLNP 467

Query: 237 CAPNMPPSHIGQNLPNQNMVPNIGGQNMPPNIGGQNMPPNIGGQNMPPNIGGQNMLPNIS 416
             P+ P      N P+    P+    N P N    + P      N P N   +   PN  
Sbjct: 468 NEPSNPNEPSNPNAPSNPNEPS--NPNEPSNPNEPSNPNEPSNPNEPSN-PKKPSNPNEP 524

Query: 417 SQSIGSQNMPMNAGGQNMPMNAGGQNMPMNVGGQNMPMNVGGQNMSMN 560
           S    + N P+N    + P      N P N    + P      N   N
Sbjct: 525 S----NPNEPLNPNEPSNPNEPSNPNEPSNPEEPSNPKEPSNPNEPSN 568

>sp|P25439|BRM_DROME Homeotic gene regulator (Brahma protein)
          Length = 1638

 Score = 43.9 bits (102), Expect = 8e-04
 Identities = 41/164 (25%), Positives = 54/164 (32%), Gaps = 22/164 (13%)
 Frame = +3

Query: 102 PSGYVNVNQPPIQSSINSTLPVVSSNMPYSMGNHNAPNKN---IPGNMCAPNMPPSHIGQ 272
           P G  +  QPP+        P  S+  P       A N     +PG       PP H+ Q
Sbjct: 229 PPGSQHAGQPPVPPQ-QQQQPPPSAGTPPQCSTPPASNPYGPPVPGQKMQVAPPPPHMQQ 287

Query: 273 NLPNQNMVPNIGGQNMPPNIGGQNMPPNIGGQNMPPN-------------------IGGQ 395
             P     P +GG   PP I  Q  P     Q+ PP                     GGQ
Sbjct: 288 GQPLPPQPPQVGG---PPPIQQQQPPQQQQQQSQPPPPEPHQHQLPNGGKPLSMGPSGGQ 344

Query: 396 NMLPNISSQSIGSQNMPMNAGGQNMPMNAGGQNMPMNVGGQNMP 527
            ++P+   Q      +P    G  +P   GG    +   G  MP
Sbjct: 345 PLIPSSPMQPQVRGTLPGMPPGSQVPQPGGGPQRQVPPAGMPMP 388

>sp|Q62280|SSXT_MOUSE SSXT protein (SYT protein) (Synovial sarcoma associated Ss18-alpha)
          Length = 418

 Score = 42.7 bits (99), Expect = 0.002
 Identities = 50/178 (28%), Positives = 70/178 (39%), Gaps = 22/178 (12%)
 Frame = +3

Query: 78  PSP-VKNQIPSGYVNVNQPPIQSSINSTLPVVSSNMPYSMGNHNAP---NKNIPGNMCAP 245
           P+P ++NQ+       N  P+Q    S L + +S+M     NH +    N ++P +   P
Sbjct: 115 PAPHMQNQMNGQMPGPNHMPMQGPGPSQLSMTNSSMNMPSSNHGSMGGYNHSVPSSQSMP 174

Query: 246 --NMPPSHIGQNL------PNQNMVPNIGG-QNMPPNIGGQNMPP----NIGGQNMPPNI 386
             N      GQ +      PN NM PN G   +  P     NMPP    +  GQ  P  +
Sbjct: 175 VQNQMTMSQGQPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNMPPGGAQHYQGQQAPMGL 234

Query: 387 GGQNMLPNISSQSIGSQNM-PMNAGGQNMPMNAGGQ----NMPMNVGGQNMPMNVGGQ 545
            GQ    N  S  +G + M P     Q  P    GQ        + GGQ  P  +  Q
Sbjct: 235 MGQ---VNQGSHMMGQRQMPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQ 289

 Score = 35.4 bits (80), Expect = 0.28
 Identities = 35/120 (29%), Positives = 48/120 (40%), Gaps = 7/120 (5%)
 Frame = +3

Query: 225 PGNMCAPNMPPSHIGQNLPNQNMVPNIGGQNMPPNIGGQNMPPNIGGQNMPPNIGGQNML 404
           PG M     PP     N+P+  MV   GG    P++  Q      G  +MP    G + L
Sbjct: 87  PGGMSQSGPPPPPRSHNMPSDGMV---GGGPPAPHMQNQMNGQMPGPNHMPMQGPGPSQL 143

Query: 405 PNISSQSIGSQNMPM----NAGGQNMPMNAGGQNMPMN---VGGQNMPMNVGGQNMSMNV 563
               S +  S NMP     + GG N  +    Q+MP+       Q  PM   G   +MN+
Sbjct: 144 ----SMTNSSMNMPSSNHGSMGGYNHSV-PSSQSMPVQNQMTMSQGQPMGNYGPRPNMNM 198

>sp|Q7UZZ9|IF2_PROMP Translation initiation factor IF-2
          Length = 1169

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 50/184 (27%), Positives = 68/184 (36%), Gaps = 15/184 (8%)
 Frame = +3

Query: 36  ISQEIQS----DPNEIHRPSPVKNQIPSGYVNVNQPPIQSS-------INSTLPVVSSNM 182
           ++Q+ QS    D N++ R     N  P    N+N P ++S+       I    P +++N 
Sbjct: 213 VNQKAQSLNRADNNKLSRAD--NNNFPKK--NLNSPNVKSTPELVGAPIRREDPKINTNR 268

Query: 183 PYSMGNHNAPNKNIPGNMCAPNMPPSHIGQNLPNQNMVP-NIGGQNMPPNIGGQNMPPNI 359
           P S  N   P+ N      + N P     Q +PN+   P   G  N P     Q  P   
Sbjct: 269 PNS--NSRQPSSN---TQISANRPGGQNRQGVPNREGGPYRQGSPNRPGTPYRQGAPNRP 323

Query: 360 GGQN---MPPNIGGQNMLPNISSQSIGSQNMPMNAGGQNMPMNAGGQNMPMNVGGQNMPM 530
           GGQN   +P   GG            GS N P        P   G  N P     Q +P 
Sbjct: 324 GGQNRQGVPNREGG-------GPYRQGSPNRPGTPNRPGTPYRQGAPNRPGGQNRQGVPN 376

Query: 531 NVGG 542
             GG
Sbjct: 377 REGG 380

 Score = 36.2 bits (82), Expect = 0.16
 Identities = 45/174 (25%), Positives = 67/174 (38%), Gaps = 8/174 (4%)
 Frame = +3

Query: 51  QSDPNEIHRPSPVKNQIPSGYVNVNQPPIQSSINSTLPVVSSNMPYSMGN-HNAPNKNIP 227
           + +P+ +    P+KN   S      +PPIQ  I     + +SN   +    +N+ N+   
Sbjct: 160 KKNPSALQDKKPLKNSSGSPAKTTARPPIQL-IEKPKNLANSNRNINANKINNSVNQKAQ 218

Query: 228 GNMCAPNMPPSHI-GQNLPNQNM-VPNIGGQNMPPNIGG--QNMPPNIGGQNMPPNIGGQ 395
               A N   S     N P +N+  PN+  ++ P  +G   +   P I       N    
Sbjct: 219 SLNRADNNKLSRADNNNFPKKNLNSPNV--KSTPELVGAPIRREDPKINTNRPNSNSRQP 276

Query: 396 NMLPNISSQSIGSQN---MPMNAGGQNMPMNAGGQNMPMNVGGQNMPMNVGGQN 548
           +    IS+   G QN   +P   GG   P   G  N P     Q  P   GGQN
Sbjct: 277 SSNTQISANRPGGQNRQGVPNREGG---PYRQGSPNRPGTPYRQGAPNRPGGQN 327

>sp|Q6P1E1|ZIM10_MOUSE Retinoic acid-induced protein 17 (PIAS-like protein Zimp10)
          Length = 1072

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 36/104 (34%), Positives = 42/104 (40%), Gaps = 7/104 (6%)
 Frame = +3

Query: 156 TLPVVSSNMPYSMGNHNAPNKNIPGNMCAPNMPPSHIGQNLPNQNMVPNIGGQNMPPNIG 335
           +LP+ S   PY  G  N  N+    N   P  P  +   N P     PN  GQ MP    
Sbjct: 403 SLPIQSIKRPYP-GEPNYGNQQYGPNSQFPTQPGQYPTPNPPRPLTSPNYPGQRMPSQPS 461

Query: 336 -GQNMPP--NIGGQNMPPNIGGQNML----PNISSQSIGSQNMP 446
            GQ  PP  N+G    P    GQN       + SS S GS N P
Sbjct: 462 TGQYPPPTVNMGQYYKPEQFNGQNNTFSSGSSYSSYSQGSVNRP 505

 Score = 32.7 bits (73), Expect = 1.8
 Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 14/112 (12%)
 Frame = +3

Query: 60  PNEIHRPSPVKNQIPSGYVNVNQ---PPIQSSINSTLPVVSSNMPYSMGNHNAP------ 212
           P +     P   Q P   VN+ Q   P   +  N+T    SS   YS G+ N P      
Sbjct: 452 PGQRMPSQPSTGQYPPPTVNMGQYYKPEQFNGQNNTFSSGSSYSSYSQGSVNRPPRPVPV 511

Query: 213 ----NKNIPGNMCAPNMPPSHIGQNL-PNQNMVPNIGGQNMPPNIGGQNMPP 353
               +  +PGN   P  P S I   L P+Q++ P     ++ PN+     PP
Sbjct: 512 ANYPHSPVPGNPTPPMTPGSSIPPYLSPSQDVKPPF-PPDIKPNMSALPPPP 562

>sp|Q15532|SSXT_HUMAN SSXT protein (Synovial sarcoma, translocated to X chromosome) (SYT
           protein)
          Length = 418

 Score = 41.6 bits (96), Expect = 0.004
 Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
 Frame = +3

Query: 285 QNMVPNIGGQNMPPNIGGQNM---PPNIGGQNMPPN--IGGQNMLPNISSQSIGSQNMPM 449
           Q+++P    QNMP   GG N    PP     NMP +  +GG    P++ +Q  G   MP 
Sbjct: 72  QSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNG--QMP- 128

Query: 450 NAGGQNMPMNAGGQN-MPMNVGGQNMPM----NVGGQNMSM 557
             G  +MPM   G N + M     NMP     ++GG N S+
Sbjct: 129 --GPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSV 167

 Score = 35.4 bits (80), Expect = 0.28
 Identities = 40/128 (31%), Positives = 53/128 (41%), Gaps = 12/128 (9%)
 Frame = +3

Query: 210 PNKNIP---GNMCAPNMPPSHIGQNLPNQNMVPNIGGQNMPPNIGGQNMPPNIGGQNMPP 380
           P +N+P   G M     PP     N+P+  MV   GG    P++  Q      G  +MP 
Sbjct: 79  PTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMV---GGGPPAPHMQNQMNGQMPGPNHMPM 135

Query: 381 NIGGQNMLPNISSQSIGSQNMPMNA----GGQNMPMNAGGQNMPMN---VGGQNMPMNVG 539
              G N L   +S    S NMP ++    GG N  +    Q+MP+       Q  PM   
Sbjct: 136 QGPGPNQLNMTNS----SMNMPSSSHGSMGGYNHSV-PSSQSMPVQNQMTMSQGQPMGNY 190

Query: 540 G--QNMSM 557
           G   NMSM
Sbjct: 191 GPRPNMSM 198

 Score = 31.6 bits (70), Expect = 4.0
 Identities = 46/176 (26%), Positives = 63/176 (35%), Gaps = 19/176 (10%)
 Frame = +3

Query: 102 PSGYVNVNQPPIQSSINSTLPVVSSNMPYSMGNHNAPNKNIPGNMCAPNMPPSHIGQNLP 281
           P G      PP   S N     +    P +    N  N  +PG    P   P     N+ 
Sbjct: 87  PGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPMQGPGPNQLNMT 146

Query: 282 NQNMVPNIGGQNMPPNIGGQNMPPNIGGQNMPPNIGGQNMLPNISSQSIGSQNMPMNAGG 461
           N +M       NMP +  G     ++GG N   ++     +P + +Q   SQ  PM   G
Sbjct: 147 NSSM-------NMPSSSHG-----SMGGYN--HSVPSSQSMP-VQNQMTMSQGQPMGNYG 191

Query: 462 ----QNMPMNAGGQ----------NMPMNVG----GQNMPMNVGGQ-NMSMNVGGQ 572
                +M  N G            NMP   G    GQ  PM + GQ N   ++ GQ
Sbjct: 192 PRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNHMMGQ 247

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 125,267,298
Number of Sequences: 369166
Number of extensions: 2860711
Number of successful extensions: 8325
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7859
length of database: 68,354,980
effective HSP length: 112
effective length of database: 47,664,660
effective search space used: 11630177040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

1. Dr_sW_015_O09
2. Dr_sW_007_M11