Planaria EST Database


DrC_00584

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00584
         (719 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8MHZ9|CL46_BOVIN  Collectin-46 precursor (CL-46) (46 kDa...    78   3e-14
sp|Q28008|CLC3A_BOVIN  C-type lectin domain family 3 member ...    72   1e-12
sp|P05452|TETN_HUMAN  Tetranectin precursor (TN) (Plasminoge...    71   3e-12
sp|P43025|TETN_MOUSE  TETRANECTIN preCURSOR (TN) (PLASMINOGE...    71   3e-12
sp|P26258|TETN_CARSP  Tetranectin-like protein                     70   4e-12
sp|P42916|CL43_BOVIN  Collectin-43 precursor (CL-43) (43 kDa...    70   6e-12
sp|P23805|CONG_BOVIN  Conglutinin precursor                        69   2e-11
sp|O75596|CLC3A_HUMAN  C-type lectin domain family 3 member ...    69   2e-11
sp|P81282|CSPG2_BOVIN  Versican core protein precursor (Larg...    68   2e-11
sp|O02659|MBL2_BOVIN  Mannose-binding protein C precursor (M...    68   2e-11
>sp|Q8MHZ9|CL46_BOVIN Collectin-46 precursor (CL-46) (46 kDa collectin)
          Length = 371

 Score = 77.8 bits (190), Expect = 3e-14
 Identities = 43/108 (39%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
 Frame = +1

Query: 292 TYNEALQFCRTRGTQLARVNSASDNQAVASFAKRVVADYYWIDANDYTEEGKWVDSNGKE 471
           +Y++A Q CR    QLA   SA++N+AVA   +    D + +  ND + EGK+    G+ 
Sbjct: 267 SYSDAQQLCREAKGQLASPRSAAENEAVAQLVRAKNNDAF-LSMNDISTEGKFTYPTGES 325

Query: 472 KPYKNWAAHEPNGNRA---ENCVFSFYLEEGTWRDISCYNKYLAICTF 606
             Y NWA+ EPN N A   ENCV  +   EG W D+ C    L IC F
Sbjct: 326 LVYSNWASGEPNNNNAGQPENCVQIY--REGKWNDVPCSEPLLVICEF 371

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
 Frame = +1

Query: 19  WLDGNDAKTEGRWVDSNDNDLKHKGFHPGEP---NGGVNENCLNGYTYIDGSWNDFPCTY 189
           +L  ND  TEG++       L +  +  GEP   N G  ENC+    Y +G WND PC+ 
Sbjct: 306 FLSMNDISTEGKFTYPTGESLVYSNWASGEPNNNNAGQPENCVQ--IYREGKWNDVPCS- 362

Query: 190 KNLYAIC 210
           + L  IC
Sbjct: 363 EPLLVIC 369
>sp|Q28008|CLC3A_BOVIN C-type lectin domain family 3 member A precursor (C-type lectin
           superfamily member 1) (Cartilage-derived C-type lectin)
          Length = 197

 Score = 72.0 bits (175), Expect = 1e-12
 Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
 Frame = +1

Query: 295 YNEALQFCRTRGTQLARVNSASDNQAVASFAKRVV--ADYYWIDANDYTEEGKWVDSNGK 468
           ++EA + C ++G  L    SA +  A+  + KR +   + +W+  ND   EGK+VD NG 
Sbjct: 88  FHEANEDCISKGGTLVVPRSADEINALRDYGKRSLPGVNDFWLGINDMVAEGKFVDINGL 147

Query: 469 EKPYKNWAAHEPNGNRAENCVFSFYLEEGTWRDISCYNKYLAICTFS 609
              + NW   +PNG + ENC       +G W D +C++    IC F+
Sbjct: 148 AISFLNWDQAQPNGGKRENCALFSQSAQGKWSDEACHSSKRYICEFT 194

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 23/65 (35%), Positives = 30/65 (46%)
 Frame = +1

Query: 16  YWLDGNDAKTEGRWVDSNDNDLKHKGFHPGEPNGGVNENCLNGYTYIDGSWNDFPCTYKN 195
           +WL  ND   EG++VD N   +    +   +PNGG  ENC        G W+D  C    
Sbjct: 128 FWLGINDMVAEGKFVDINGLAISFLNWDQAQPNGGKRENCALFSQSAQGKWSDEACHSSK 187

Query: 196 LYAIC 210
            Y IC
Sbjct: 188 RY-IC 191
>sp|P05452|TETN_HUMAN Tetranectin precursor (TN) (Plasminogen-kringle 4 binding protein)
          Length = 202

 Score = 71.2 bits (173), Expect = 3e-12
 Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
 Frame = +1

Query: 250 EVDSEKMIVSTDRYTYNEALQFCRTRGTQLARVNSASDNQAVASFAKRVVADY--YWIDA 423
           +V  +  +  T   T++EA + C +RG  L+   + S+N A+  + ++ V +    W+  
Sbjct: 76  KVHMKCFLAFTQTKTFHEASEDCISRGGTLSTPQTGSENDALYEYLRQSVGNEAEIWLGL 135

Query: 424 NDYTEEGKWVDSNGKEKPYKNWAAH---EPNGNRAENCVFSFYLEEGTWRDISCYNKYLA 594
           ND   EG WVD  G    YKNW      +P+G + ENC        G W D  C ++   
Sbjct: 136 NDMAAEGTWVDMTGARIAYKNWETEITAQPDGGKTENCAVLSGAANGKWFDKRCRDQLPY 195

Query: 595 ICTF 606
           IC F
Sbjct: 196 ICQF 199

 Score = 38.9 bits (89), Expect = 0.014
 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
 Frame = +1

Query: 19  WLDGNDAKTEGRWVDSNDNDLKHKGFH---PGEPNGGVNENCLNGYTYIDGSWNDFPC 183
           WL  ND   EG WVD     + +K +      +P+GG  ENC       +G W D  C
Sbjct: 132 WLGLNDMAAEGTWVDMTGARIAYKNWETEITAQPDGGKTENCAVLSGAANGKWFDKRC 189
>sp|P43025|TETN_MOUSE TETRANECTIN preCURSOR (TN) (PLASMINOGEN-KRINGLE 4 BINDING PROTEIN)
          Length = 202

 Score = 71.2 bits (173), Expect = 3e-12
 Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
 Frame = +1

Query: 250 EVDSEKMIVSTDRYTYNEALQFCRTRGTQLARVNSASDNQAVASFAKRVVAD--YYWIDA 423
           +V+ + ++  T   T++EA + C ++G  L    S  +N+A+  +A+  V +    W+  
Sbjct: 76  KVNLKCLLAFTQPKTFHEASEDCISQGGTLGTPQSELENEALFEYARHSVGNDANIWLGL 135

Query: 424 NDYTEEGKWVDSNGKEKPYKNWAAH---EPNGNRAENCVFSFYLEEGTWRDISCYNKYLA 594
           ND   EG WVD  G    YKNW      +P+G +AENC        G W D  C ++   
Sbjct: 136 NDMAAEGAWVDMTGGLLAYKNWETEITTQPDGGKAENCAALSGAANGKWFDKRCRDQLPY 195

Query: 595 ICTFS 609
           IC F+
Sbjct: 196 ICQFA 200

 Score = 38.5 bits (88), Expect = 0.018
 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
 Frame = +1

Query: 19  WLDGNDAKTEGRWVDSNDNDLKHKGFH---PGEPNGGVNENCLNGYTYIDGSWNDFPC 183
           WL  ND   EG WVD     L +K +      +P+GG  ENC       +G W D  C
Sbjct: 132 WLGLNDMAAEGAWVDMTGGLLAYKNWETEITTQPDGGKAENCAALSGAANGKWFDKRC 189
>sp|P26258|TETN_CARSP Tetranectin-like protein
          Length = 166

 Score = 70.5 bits (171), Expect = 4e-12
 Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
 Frame = +1

Query: 271 IVSTDRYTYNEALQFCRTRGTQLARVNSASDNQAVASFAKR--VVADYYWIDANDYTEEG 444
           + S    +Y+ A + C  +G  L+   S+ +  ++ S+AK+  V A  +WI  ND T EG
Sbjct: 49  LASRGSKSYHAANEDCIAQGGTLSIPRSSDEGNSLRSYAKKSLVGARDFWIGVNDMTTEG 108

Query: 445 KWVDSNGKEKPYKNWAAHEPNGNRAENCVFSFYLEEGTWRDISCYNKYLAICTF 606
           K+VD NG    Y NW   +P G   ENCV +    +G W D  C ++   IC +
Sbjct: 109 KFVDVNGLPITYFNWDRSKPVGGTRENCVAASTSGQGKWSDDVCRSEKRYICEY 162

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 23/65 (35%), Positives = 34/65 (52%)
 Frame = +1

Query: 16  YWLDGNDAKTEGRWVDSNDNDLKHKGFHPGEPNGGVNENCLNGYTYIDGSWNDFPCTYKN 195
           +W+  ND  TEG++VD N   + +  +   +P GG  ENC+   T   G W+D  C  + 
Sbjct: 97  FWIGVNDMTTEGKFVDVNGLPITYFNWDRSKPVGGTRENCVAASTSGQGKWSDDVCRSEK 156

Query: 196 LYAIC 210
            Y IC
Sbjct: 157 RY-IC 160
>sp|P42916|CL43_BOVIN Collectin-43 precursor (CL-43) (43 kDa collectin)
          Length = 321

 Score = 70.1 bits (170), Expect = 6e-12
 Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
 Frame = +1

Query: 292 TYNEALQFCRTRGTQLARVNSASDNQAVASFAKRVVADYYWIDANDYTEEGKWVDSNGKE 471
           +Y++A Q CR    QLA   S+++N+AV     R    + ++  ND ++EGK+    G  
Sbjct: 216 SYSDAEQLCREAKGQLASPRSSAENEAVTQLV-RAKNKHAYLSMNDISKEGKFTYPTGGS 274

Query: 472 KPYKNWAAHEPNGNRA-----ENCVFSFYLEEGTWRDISCYNKYLAICTF 606
             Y NWA  EPN NRA     ENC+  +   +G W DI C  + L IC F
Sbjct: 275 LDYSNWAPGEPN-NRAKDEGPENCLEIY--SDGNWNDIECREERLVICEF 321

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
 Frame = +1

Query: 19  WLDGNDAKTEGRWVDSNDNDLKHKGFHPGEPNGGVN----ENCLNGYTYIDGSWNDFPCT 186
           +L  ND   EG++       L +  + PGEPN        ENCL    Y DG+WND  C 
Sbjct: 255 YLSMNDISKEGKFTYPTGGSLDYSNWAPGEPNNRAKDEGPENCLE--IYSDGNWNDIECR 312

Query: 187 YKNLYAIC 210
            + L  IC
Sbjct: 313 EERL-VIC 319
>sp|P23805|CONG_BOVIN Conglutinin precursor
          Length = 371

 Score = 68.6 bits (166), Expect = 2e-11
 Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
 Frame = +1

Query: 292 TYNEALQFCRTRGTQLARVNSASDNQAVASFAKRVVADYYWIDANDYTEEGKWVDSNGKE 471
           +Y++A Q CR    QLA   S+++N+AV    +    + Y +  ND + EG++    G+ 
Sbjct: 267 SYSDAEQLCREAKGQLASPRSSAENEAVTQMVRAQEKNAY-LSMNDISTEGRFTYPTGEI 325

Query: 472 KPYKNWAAHEPNGN---RAENCVFSFYLEEGTWRDISCYNKYLAICTF 606
             Y NWA  EPN +   + ENCV  F   +G W D+ C  + L IC F
Sbjct: 326 LVYSNWADGEPNNSDEGQPENCVEIF--PDGKWNDVPCSKQLLVICEF 371

 Score = 46.6 bits (109), Expect = 7e-05
 Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
 Frame = +1

Query: 19  WLDGNDAKTEGRWVDSNDNDLKHKGFHPGEPNG---GVNENCLNGYTYIDGSWNDFPCTY 189
           +L  ND  TEGR+       L +  +  GEPN    G  ENC+    + DG WND PC+ 
Sbjct: 306 YLSMNDISTEGRFTYPTGEILVYSNWADGEPNNSDEGQPENCVE--IFPDGKWNDVPCS- 362

Query: 190 KNLYAIC 210
           K L  IC
Sbjct: 363 KQLLVIC 369
>sp|O75596|CLC3A_HUMAN C-type lectin domain family 3 member A precursor (C-type lectin
           superfamily member 1) (Cartilage-derived C-type lectin)
          Length = 197

 Score = 68.6 bits (166), Expect = 2e-11
 Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
 Frame = +1

Query: 295 YNEALQFCRTRGTQLARVNSASDNQAVASFAKRVV--ADYYWIDANDYTEEGKWVDSNGK 468
           ++EA + C ++G  L    ++ +  A+  + KR +   + +W+  ND   EGK+VD NG 
Sbjct: 88  FHEANEDCISKGGILVIPRNSDEINALQDYGKRSLPGVNDFWLGINDMVTEGKFVDVNGI 147

Query: 469 EKPYKNWAAHEPNGNRAENCVFSFYLEEGTWRDISCYNKYLAICTFS 609
              + NW   +PNG + ENCV      +G W D +C +    IC F+
Sbjct: 148 AISFLNWDRAQPNGGKRENCVLFSQSAQGKWSDEACRSSKRYICEFT 194

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 24/65 (36%), Positives = 32/65 (49%)
 Frame = +1

Query: 16  YWLDGNDAKTEGRWVDSNDNDLKHKGFHPGEPNGGVNENCLNGYTYIDGSWNDFPCTYKN 195
           +WL  ND  TEG++VD N   +    +   +PNGG  ENC+       G W+D  C    
Sbjct: 128 FWLGINDMVTEGKFVDVNGIAISFLNWDRAQPNGGKRENCVLFSQSAQGKWSDEACRSSK 187

Query: 196 LYAIC 210
            Y IC
Sbjct: 188 RY-IC 191
>sp|P81282|CSPG2_BOVIN Versican core protein precursor (Large fibroblast proteoglycan)
            (Chondroitin sulfate proteoglycan core protein 2) (PG-M)
            (Glial hyaluronate-binding protein) (GHAP)
          Length = 3381

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 6/154 (3%)
 Frame = +1

Query: 133  CLNGYTYIDGSWNDFPCTYKNLY--AICARDSLYIRFSFDYEVDSEKMIVSTDRYTYNEA 306
            C NG T IDG +N F C     Y  A+C +D+    + + ++   +       R T++ A
Sbjct: 3121 CRNGATCIDG-FNTFRCLCLPSYVGALCEQDTETCDYGW-HKFQGQCYKYFAHRRTWDAA 3178

Query: 307  LQFCRTRGTQLARVNSASDNQAVASFAKRVVADYYWIDAND--YTEEGKWVDSNGKEKPY 480
             + CR +G  L  + S  +      F  RV  DY WI  ND  +  + +W D  G    Y
Sbjct: 3179 ERECRLQGAHLTSILSHEEQM----FVNRVGHDYQWIGLNDKMFEHDFRWTD--GSTLQY 3232

Query: 481  KNWAAHEPNG--NRAENCVFSFYLEEGTWRDISC 576
            +NW  ++P+   +  E+CV   + E G W D+ C
Sbjct: 3233 ENWRPNQPDSFFSTGEDCVVIIWHENGQWNDVPC 3266

 Score = 39.7 bits (91), Expect = 0.008
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
 Frame = +1

Query: 10   DLYWLDGNDAKTEG--RWVDSNDNDLKHKGFHPGEPNG--GVNENCLNGYTYIDGSWNDF 177
            D  W+  ND   E   RW D +   L+++ + P +P+      E+C+    + +G WND 
Sbjct: 3207 DYQWIGLNDKMFEHDFRWTDGST--LQYENWRPNQPDSFFSTGEDCVVIIWHENGQWNDV 3264

Query: 178  PCTYKNLY 201
            PC Y   Y
Sbjct: 3265 PCNYHLTY 3272
>sp|O02659|MBL2_BOVIN Mannose-binding protein C precursor (MBP-C) (Mannan-binding
           protein)
          Length = 249

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 40/129 (31%), Positives = 64/129 (49%), Gaps = 1/129 (0%)
 Frame = +1

Query: 226 YIRFSFDYEVDSEKMIVSTDRYTYNEALQFCRTRGTQLARVNSASDNQAVASFAKRVVAD 405
           ++ FS    V  +    +  +  +NE    C     ++A   +A +N+A+    K +V +
Sbjct: 126 WLIFSLGKRVGKKAFFTNGKKMPFNEVKTLCAQFQGRVATPMNAEENRAL----KDLVTE 181

Query: 406 YYWIDANDYTEEGKWVDSNGKEKPYKNWAAHEP-NGNRAENCVFSFYLEEGTWRDISCYN 582
             ++   D   EGK+VD  GK   Y+NW   EP N +  E+CV    L +GTW DI+C  
Sbjct: 182 EAFLGITDQETEGKFVDLTGKGVTYQNWNDGEPNNASPGEHCV--TLLSDGTWNDIACSA 239

Query: 583 KYLAICTFS 609
            +L +C FS
Sbjct: 240 SFLTVCEFS 248

 Score = 38.9 bits (89), Expect = 0.014
 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = +1

Query: 34  DAKTEGRWVDSNDNDLKHKGFHPGEP-NGGVNENCLNGYTYIDGSWNDFPCT 186
           D +TEG++VD     + ++ ++ GEP N    E+C+      DG+WND  C+
Sbjct: 189 DQETEGKFVDLTGKGVTYQNWNDGEPNNASPGEHCVT--LLSDGTWNDIACS 238
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,461,073
Number of Sequences: 369166
Number of extensions: 1887762
Number of successful extensions: 5338
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5179
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 6413660220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00584

  1. Dr_sW_015_E19
  2. Dr_sW_002_J23
  3. Dr_sW_023_F13