Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_015_E19
(160 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O75596|CLC3A_HUMAN C-type lectin domain family 3 member ... 39 0.003
sp|Q28008|CLC3A_BOVIN C-type lectin domain family 3 member ... 37 0.011
sp|P26258|TETN_CARSP Tetranectin-like protein 37 0.019
sp|P82596|PLC_HALLA Perlucin 36 0.024
sp|Q9EPW4|CLC3A_MOUSE C-type lectin domain family 3 member ... 34 0.12
sp|Q66S03|NATTE_THANI Nattectin precursor 34 0.12
sp|P05452|TETN_HUMAN Tetranectin precursor (TN) (Plasminoge... 33 0.16
sp|Q66S63|MBL2_PANTR Mannose-binding protein C precursor (M... 33 0.27
sp|Q66S65|MBL2_PAPPA Mannose-binding protein C precursor (M... 33 0.27
sp|P11226|MBL2_HUMAN Mannose-binding protein C precursor (M... 33 0.27
>sp|O75596|CLC3A_HUMAN C-type lectin domain family 3 member A precursor (C-type lectin
superfamily member 1) (Cartilage-derived C-type lectin)
Length = 197
Score = 39.3 bits (90), Expect = 0.003
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +1
Query: 16 YWLDGNDAKTEGRWVDSNDNDLKRKGFHPGEPNGGVNENCL 138
+WL ND TEG++VD N + + +PNGG ENC+
Sbjct: 128 FWLGINDMVTEGKFVDVNGIAISFLNWDRAQPNGGKRENCV 168
>sp|Q28008|CLC3A_BOVIN C-type lectin domain family 3 member A precursor (C-type lectin
superfamily member 1) (Cartilage-derived C-type lectin)
Length = 197
Score = 37.4 bits (85), Expect = 0.011
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 16 YWLDGNDAKTEGRWVDSNDNDLKRKGFHPGEPNGGVNENC 135
+WL ND EG++VD N + + +PNGG ENC
Sbjct: 128 FWLGINDMVAEGKFVDINGLAISFLNWDQAQPNGGKRENC 167
>sp|P26258|TETN_CARSP Tetranectin-like protein
Length = 166
Score = 36.6 bits (83), Expect = 0.019
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 16 YWLDGNDAKTEGRWVDSNDNDLKRKGFHPGEPNGGVNENCLNGYT 150
+W+ ND TEG++VD N + + +P GG ENC+ T
Sbjct: 97 FWIGVNDMTTEGKFVDVNGLPITYFNWDRSKPVGGTRENCVAAST 141
>sp|P82596|PLC_HALLA Perlucin
Length = 155
Score = 36.2 bits (82), Expect = 0.024
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 16 YWLDGNDAKTEGRWVDSNDNDLKRKGFHPGEP-NGGVNENCL 138
YWL +D EGRW+ + + PG+P N G E+CL
Sbjct: 62 YWLGASDLNIEGRWLWEGQRRMNYTNWSPGQPDNAGGIEHCL 103
>sp|Q9EPW4|CLC3A_MOUSE C-type lectin domain family 3 member A precursor (C-type lectin
superfamily member 1) (Cartilage-derived C-type lectin)
Length = 196
Score = 33.9 bits (76), Expect = 0.12
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 16 YWLDGNDAKTEGRWVDSNDNDLKRKGFHPGEPNGGVNENCL 138
+WL ND TEG+++D + + + +P+GG ENC+
Sbjct: 128 FWLGINDMVTEGKFLDVHGFAVSFLNWDRAQPSGGKRENCV 168
>sp|Q66S03|NATTE_THANI Nattectin precursor
Length = 159
Score = 33.9 bits (76), Expect = 0.12
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 19 WLDGNDAKTEGRWVDSNDNDLKRKGFHPGEPNGGV-NENC 135
W+ GNDA EG W S+ + KG+ G+P+ V E+C
Sbjct: 93 WIGGNDAVKEGMWFWSDGSKFNYKGWKKGQPDKHVPAEHC 132
>sp|P05452|TETN_HUMAN Tetranectin precursor (TN) (Plasminogen-kringle 4 binding protein)
Length = 202
Score = 33.5 bits (75), Expect = 0.16
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = +1
Query: 19 WLDGNDAKTEGRWVDSNDNDLKRKGFH---PGEPNGGVNENC 135
WL ND EG WVD + K + +P+GG ENC
Sbjct: 132 WLGLNDMAAEGTWVDMTGARIAYKNWETEITAQPDGGKTENC 173
>sp|Q66S63|MBL2_PANTR Mannose-binding protein C precursor (MBP-C) (MBP1) (Mannan-binding
protein) (Mannose-binding lectin)
Length = 248
Score = 32.7 bits (73), Expect = 0.27
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 34 DAKTEGRWVDSNDNDLKRKGFHPGEP-NGGVNENCL 138
D KTEG++VD N L ++ GEP N G +E+C+
Sbjct: 188 DEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDEDCV 223
>sp|Q66S65|MBL2_PAPPA Mannose-binding protein C precursor (MBP-C) (MBP1) (Mannan-binding
protein) (Mannose-binding lectin)
sp|Q66S50|MBL2_MACFA Mannose-binding protein C precursor (MBP-C) (MBP1) (Mannan-binding
protein) (Mannose-binding lectin)
Length = 248
Score = 32.7 bits (73), Expect = 0.27
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 34 DAKTEGRWVDSNDNDLKRKGFHPGEP-NGGVNENCL 138
D TEG +VD N L ++ GEP N G NE+C+
Sbjct: 188 DENTEGEFVDLTGNKLTYTNWNDGEPNNAGSNEDCV 223
>sp|P11226|MBL2_HUMAN Mannose-binding protein C precursor (MBP-C) (MBP1) (Mannan-binding
protein) (Mannose-binding lectin)
Length = 248
Score = 32.7 bits (73), Expect = 0.27
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 34 DAKTEGRWVDSNDNDLKRKGFHPGEP-NGGVNENCL 138
D KTEG++VD N L ++ GEP N G +E+C+
Sbjct: 188 DEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDEDCV 223
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.314 0.141 0.485
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,736,795
Number of Sequences: 369166
Number of extensions: 386318
Number of successful extensions: 921
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 68,354,980
effective HSP length: 25
effective length of database: 63,736,605
effective search space used: 1720888335
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)