Planaria EST Database

DrC_00534

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00534
         (800 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P49448|DHE4_HUMAN  Glutamate dehydrogenase 2, mitochondri...   388   e-107
sp|Q64HZ8|DHE4_PANTR  Glutamate dehydrogenase 2, mitochondri...   388   e-107
sp|Q64HZ9|DHE4_HYLLA  Glutamate dehydrogenase 2, mitochondri...   388   e-107
sp|Q64I01|DHE4_GORGO  Glutamate dehydrogenase 2, mitochondri...   386   e-107
sp|Q64I00|DHE4_PONPY  Glutamate dehydrogenase 2, mitochondri...   386   e-107
sp|P26443|DHE3_MOUSE  Glutamate dehydrogenase 1, mitochondri...   385   e-107
sp|P00366|DHE3_BOVIN  Glutamate dehydrogenase 1, mitochondri...   385   e-107
sp|P00367|DHE3_HUMAN  Glutamate dehydrogenase 1, mitochondri...   384   e-106
sp|P10860|DHE3_RAT  Glutamate dehydrogenase 1, mitochondrial...   383   e-106
sp|P82264|DHE3_CHAAC  GLutamate dehydrogenase (GDH)               379   e-105

>sp|P49448|DHE4_HUMAN Glutamate dehydrogenase 2, mitochondrial precursor (GDH)
          Length = 558

 Score =  388 bits (996), Expect = e-107
 Identities = 183/265 (69%), Positives = 226/265 (85%)
 Frame = +3

Query: 6   SQQKDDVKFFEMVEYFFNKAARVCEGELIKADKTKLTPEAKTKHVQGVLNMIRNCNYVIQ 185
           + ++DD  FF+MVE FF++ A + E +L+K  +T+ + E K   V+G+L +I+ CN+V+ 
Sbjct: 58  ADREDDPNFFKMVEGFFDRGASIVEDKLVKDLRTQESEEQKRNRVRGILRIIKPCNHVLS 117

Query: 186 INFPIRRDDGSFEIIQGWRAQHSLHRTPCKGGIRYSMDVSKDEVKALAALMTYKCAVVDV 365
           ++FPIRRDDGS+E+I+G+RAQHS HRTPCKGGIRYS DVS DEVKALA+LMTYKCAVVDV
Sbjct: 118 LSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDV 177

Query: 366 PFGGAKAGLRIDPRLYTVGELERITRRFTVELAKKNFIGPGVDVPAPDMGTGEREMAWIA 545
           PFGGAKAG++I+P+ YT  ELE+ITRRFT+ELAKK FIGPGVDVPAPDM TGEREM+WIA
Sbjct: 178 PFGGAKAGVKINPKNYTENELEKITRRFTMELAKKGFIGPGVDVPAPDMNTGEREMSWIA 237

Query: 546 NTFAHTRGDNDLHASACVTGKPISQGGIHGRISATGRGVYHGIENFIHNPDMVDKLGITP 725
           +T+A T G  D++A ACVTGKPISQGGIHGRISATGRGV+HGIENFI+    +  LG+TP
Sbjct: 238 DTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTP 297

Query: 726 GFKDKTFIIQGFGNVGLHSMRYLVR 800
           GF+DKTF++QGFGNVGLHSMRYL R
Sbjct: 298 GFRDKTFVVQGFGNVGLHSMRYLHR 322

>sp|Q64HZ8|DHE4_PANTR Glutamate dehydrogenase 2, mitochondrial precursor (GDH)
          Length = 558

 Score =  388 bits (996), Expect = e-107
 Identities = 183/265 (69%), Positives = 226/265 (85%)
 Frame = +3

Query: 6   SQQKDDVKFFEMVEYFFNKAARVCEGELIKADKTKLTPEAKTKHVQGVLNMIRNCNYVIQ 185
           + ++DD  FF+MVE FF++ A + E +L+K  +T+ + E K   V+G+L +I+ CN+V+ 
Sbjct: 58  ADREDDPNFFKMVEGFFDRGASIVEDKLVKDLRTQESEEQKRNRVRGILRIIKPCNHVLS 117

Query: 186 INFPIRRDDGSFEIIQGWRAQHSLHRTPCKGGIRYSMDVSKDEVKALAALMTYKCAVVDV 365
           ++FPIRRDDGS+E+I+G+RAQHS HRTPCKGGIRYS DVS DEVKALA+LMTYKCAVVDV
Sbjct: 118 LSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDV 177

Query: 366 PFGGAKAGLRIDPRLYTVGELERITRRFTVELAKKNFIGPGVDVPAPDMGTGEREMAWIA 545
           PFGGAKAG++I+P+ YT  ELE+ITRRFT+ELAKK FIGPGVDVPAPDM TGEREM+WIA
Sbjct: 178 PFGGAKAGVKINPKNYTENELEKITRRFTMELAKKGFIGPGVDVPAPDMNTGEREMSWIA 237

Query: 546 NTFAHTRGDNDLHASACVTGKPISQGGIHGRISATGRGVYHGIENFIHNPDMVDKLGITP 725
           +T+A T G  D++A ACVTGKPISQGGIHGRISATGRGV+HGIENFI+    +  LG+TP
Sbjct: 238 DTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTP 297

Query: 726 GFKDKTFIIQGFGNVGLHSMRYLVR 800
           GF+DKTF++QGFGNVGLHSMRYL R
Sbjct: 298 GFRDKTFVVQGFGNVGLHSMRYLHR 322

>sp|Q64HZ9|DHE4_HYLLA Glutamate dehydrogenase 2, mitochondrial precursor (GDH)
          Length = 555

 Score =  388 bits (996), Expect = e-107
 Identities = 183/265 (69%), Positives = 225/265 (84%)
 Frame = +3

Query: 6   SQQKDDVKFFEMVEYFFNKAARVCEGELIKADKTKLTPEAKTKHVQGVLNMIRNCNYVIQ 185
           + +KDD  FF+MVE FF++ A + E +L+K  +T+ + E K   V+G+L +I+ CN+V+ 
Sbjct: 55  ADRKDDPNFFKMVEGFFDRGASIVEDKLVKDLRTRESEEQKRNRVRGILRIIKPCNHVLS 114

Query: 186 INFPIRRDDGSFEIIQGWRAQHSLHRTPCKGGIRYSMDVSKDEVKALAALMTYKCAVVDV 365
           ++FPIRRDDGS+E+I+G+RAQHS HRTPCKGGIRYS DVS DEVKALA+LMTYKCAVVDV
Sbjct: 115 LSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSADVSVDEVKALASLMTYKCAVVDV 174

Query: 366 PFGGAKAGLRIDPRLYTVGELERITRRFTVELAKKNFIGPGVDVPAPDMGTGEREMAWIA 545
           PFGGAKAG++I+P+ YT  ELE+ITRRFT+ELAKK FIGPG+DVPAPDM TGEREM+WIA
Sbjct: 175 PFGGAKAGVKINPKNYTENELEKITRRFTMELAKKGFIGPGIDVPAPDMNTGEREMSWIA 234

Query: 546 NTFAHTRGDNDLHASACVTGKPISQGGIHGRISATGRGVYHGIENFIHNPDMVDKLGITP 725
           +T+A T G  D++A ACVTGKPISQGGIHGRISATGRGV+HGIENFI+    +  LG+TP
Sbjct: 235 DTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTP 294

Query: 726 GFKDKTFIIQGFGNVGLHSMRYLVR 800
           GF DKTF++QGFGNVGLHSMRYL R
Sbjct: 295 GFGDKTFVVQGFGNVGLHSMRYLHR 319

>sp|Q64I01|DHE4_GORGO Glutamate dehydrogenase 2, mitochondrial precursor (GDH)
          Length = 558

 Score =  386 bits (992), Expect = e-107
 Identities = 183/265 (69%), Positives = 225/265 (84%)
 Frame = +3

Query: 6   SQQKDDVKFFEMVEYFFNKAARVCEGELIKADKTKLTPEAKTKHVQGVLNMIRNCNYVIQ 185
           + ++DD  FF+MVE FF++ A + E +L+K  +T+ + E K   V+G+L +I+ CN+V+ 
Sbjct: 58  ADREDDPNFFKMVEGFFDRGASIVEDKLVKDLRTQESEEQKRNRVRGILRIIKPCNHVLS 117

Query: 186 INFPIRRDDGSFEIIQGWRAQHSLHRTPCKGGIRYSMDVSKDEVKALAALMTYKCAVVDV 365
           + FPIRRDDGS+E+I+G+RAQHS HRTPCKGGIRYS DVS DEVKALA+LMTYKCAVVDV
Sbjct: 118 LCFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDV 177

Query: 366 PFGGAKAGLRIDPRLYTVGELERITRRFTVELAKKNFIGPGVDVPAPDMGTGEREMAWIA 545
           PFGGAKAG++I+P+ YT  ELE+ITRRFT+ELAKK FIGPGVDVPAPDM TGEREM+WIA
Sbjct: 178 PFGGAKAGVKINPKNYTENELEKITRRFTMELAKKGFIGPGVDVPAPDMNTGEREMSWIA 237

Query: 546 NTFAHTRGDNDLHASACVTGKPISQGGIHGRISATGRGVYHGIENFIHNPDMVDKLGITP 725
           +T+A T G  D++A ACVTGKPISQGGIHGRISATGRGV+HGIENFI+    +  LG+TP
Sbjct: 238 DTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTP 297

Query: 726 GFKDKTFIIQGFGNVGLHSMRYLVR 800
           GF+DKTF++QGFGNVGLHSMRYL R
Sbjct: 298 GFRDKTFVVQGFGNVGLHSMRYLHR 322

>sp|Q64I00|DHE4_PONPY Glutamate dehydrogenase 2, mitochondrial precursor (GDH)
          Length = 558

 Score =  386 bits (991), Expect = e-107
 Identities = 181/265 (68%), Positives = 225/265 (84%)
 Frame = +3

Query: 6   SQQKDDVKFFEMVEYFFNKAARVCEGELIKADKTKLTPEAKTKHVQGVLNMIRNCNYVIQ 185
           + ++DD  FF+MVE FF++ A + E +L+K  +T+ + E K   V+G+L +I+ CN+V+ 
Sbjct: 58  ADREDDPNFFKMVEGFFDRGASIVEDKLVKDLRTQESEEQKRNRVRGILRIIKPCNHVLS 117

Query: 186 INFPIRRDDGSFEIIQGWRAQHSLHRTPCKGGIRYSMDVSKDEVKALAALMTYKCAVVDV 365
           ++FPIRRDDGS+E+I+G+RAQHS HRTPCKGGIRYS DVS DEVKALA+LMTYKCAVVDV
Sbjct: 118 LSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDV 177

Query: 366 PFGGAKAGLRIDPRLYTVGELERITRRFTVELAKKNFIGPGVDVPAPDMGTGEREMAWIA 545
           PFGGAKAG++I+P+ YT  ELE+ITRRFT+ELAKK FIGPG+DVPAPDM TGEREM+WIA
Sbjct: 178 PFGGAKAGVKINPKNYTENELEKITRRFTMELAKKGFIGPGIDVPAPDMNTGEREMSWIA 237

Query: 546 NTFAHTRGDNDLHASACVTGKPISQGGIHGRISATGRGVYHGIENFIHNPDMVDKLGITP 725
           +T+A T G  D++A ACVTGKPISQGGIHGRISATGRGV+HGIENFI+    +  +G+TP
Sbjct: 238 DTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSNVGMTP 297

Query: 726 GFKDKTFIIQGFGNVGLHSMRYLVR 800
           GF DKTF++QGFGNVGLHSMRYL R
Sbjct: 298 GFGDKTFVVQGFGNVGLHSMRYLHR 322

>sp|P26443|DHE3_MOUSE Glutamate dehydrogenase 1, mitochondrial precursor (GDH)
          Length = 558

 Score =  385 bits (990), Expect = e-107
 Identities = 182/265 (68%), Positives = 225/265 (84%)
 Frame = +3

Query: 6   SQQKDDVKFFEMVEYFFNKAARVCEGELIKADKTKLTPEAKTKHVQGVLNMIRNCNYVIQ 185
           + ++DD  FF+MVE FF++ A + E +L++  KT+ + E K   V+G+L +I+ CN+V+ 
Sbjct: 58  ADREDDPNFFKMVEGFFDRGASIVEDKLVEDLKTRESEEQKRNRVRGILRIIKPCNHVLS 117

Query: 186 INFPIRRDDGSFEIIQGWRAQHSLHRTPCKGGIRYSMDVSKDEVKALAALMTYKCAVVDV 365
           ++FPIRRDDGS+E+I+G+RAQHS HRTPCKGGIRYS DVS DEVKALA+LMTYKCAVVDV
Sbjct: 118 LSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDV 177

Query: 366 PFGGAKAGLRIDPRLYTVGELERITRRFTVELAKKNFIGPGVDVPAPDMGTGEREMAWIA 545
           PFGGAKAG++I+P+ YT  ELE+ITRRFT+ELAKK FIGPG+DVPAPDM TGEREM+WIA
Sbjct: 178 PFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGIDVPAPDMSTGEREMSWIA 237

Query: 546 NTFAHTRGDNDLHASACVTGKPISQGGIHGRISATGRGVYHGIENFIHNPDMVDKLGITP 725
           +T+A T G  D++A ACVTGKPISQGGIHGRISATGRGV+HGIENFI+    +  LG+TP
Sbjct: 238 DTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTP 297

Query: 726 GFKDKTFIIQGFGNVGLHSMRYLVR 800
           GF DKTF++QGFGNVGLHSMRYL R
Sbjct: 298 GFGDKTFVVQGFGNVGLHSMRYLHR 322

>sp|P00366|DHE3_BOVIN Glutamate dehydrogenase 1, mitochondrial precursor (GDH)
          Length = 558

 Score =  385 bits (989), Expect = e-107
 Identities = 183/265 (69%), Positives = 224/265 (84%)
 Frame = +3

Query: 6   SQQKDDVKFFEMVEYFFNKAARVCEGELIKADKTKLTPEAKTKHVQGVLNMIRNCNYVIQ 185
           + ++DD  FF+MVE FF++ A + E +L++  KT+ T E K   V+ +L +I+ CN+V+ 
Sbjct: 58  ADREDDPNFFKMVEGFFDRGASIVEDKLVEDLKTRETEEQKRNRVRSILRIIKPCNHVLS 117

Query: 186 INFPIRRDDGSFEIIQGWRAQHSLHRTPCKGGIRYSMDVSKDEVKALAALMTYKCAVVDV 365
           ++FPIRRDDGS+E+I+G+RAQHS HRTPCKGGIRYS DVS DEVKALA+LMTYKCAVVDV
Sbjct: 118 LSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDV 177

Query: 366 PFGGAKAGLRIDPRLYTVGELERITRRFTVELAKKNFIGPGVDVPAPDMGTGEREMAWIA 545
           PFGGAKAG++I+P+ YT  ELE+ITRRFT+ELAKK FIGPGVDVPAPDM TGEREM+WIA
Sbjct: 178 PFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIA 237

Query: 546 NTFAHTRGDNDLHASACVTGKPISQGGIHGRISATGRGVYHGIENFIHNPDMVDKLGITP 725
           +T+A T G  D++A ACVTGKPISQGGIHGRISATGRGV+HGIENFI+    +  LG+TP
Sbjct: 238 DTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTP 297

Query: 726 GFKDKTFIIQGFGNVGLHSMRYLVR 800
           GF DKTF++QGFGNVGLHSMRYL R
Sbjct: 298 GFGDKTFVVQGFGNVGLHSMRYLHR 322

>sp|P00367|DHE3_HUMAN Glutamate dehydrogenase 1, mitochondrial precursor (GDH)
          Length = 558

 Score =  384 bits (987), Expect = e-106
 Identities = 181/265 (68%), Positives = 225/265 (84%)
 Frame = +3

Query: 6   SQQKDDVKFFEMVEYFFNKAARVCEGELIKADKTKLTPEAKTKHVQGVLNMIRNCNYVIQ 185
           + ++DD  FF+MVE FF++ A + E +L++  +T+ + E K   V+G+L +I+ CN+V+ 
Sbjct: 58  ADREDDPNFFKMVEGFFDRGASIVEDKLVEDLRTRESEEQKRNRVRGILRIIKPCNHVLS 117

Query: 186 INFPIRRDDGSFEIIQGWRAQHSLHRTPCKGGIRYSMDVSKDEVKALAALMTYKCAVVDV 365
           ++FPIRRDDGS+E+I+G+RAQHS HRTPCKGGIRYS DVS DEVKALA+LMTYKCAVVDV
Sbjct: 118 LSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDV 177

Query: 366 PFGGAKAGLRIDPRLYTVGELERITRRFTVELAKKNFIGPGVDVPAPDMGTGEREMAWIA 545
           PFGGAKAG++I+P+ YT  ELE+ITRRFT+ELAKK FIGPG+DVPAPDM TGEREM+WIA
Sbjct: 178 PFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGIDVPAPDMSTGEREMSWIA 237

Query: 546 NTFAHTRGDNDLHASACVTGKPISQGGIHGRISATGRGVYHGIENFIHNPDMVDKLGITP 725
           +T+A T G  D++A ACVTGKPISQGGIHGRISATGRGV+HGIENFI+    +  LG+TP
Sbjct: 238 DTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTP 297

Query: 726 GFKDKTFIIQGFGNVGLHSMRYLVR 800
           GF DKTF++QGFGNVGLHSMRYL R
Sbjct: 298 GFGDKTFVVQGFGNVGLHSMRYLHR 322

>sp|P10860|DHE3_RAT Glutamate dehydrogenase 1, mitochondrial precursor (GDH)
           (Memory-related protein 2) (MRG-2)
          Length = 558

 Score =  383 bits (983), Expect = e-106
 Identities = 181/265 (68%), Positives = 223/265 (84%)
 Frame = +3

Query: 6   SQQKDDVKFFEMVEYFFNKAARVCEGELIKADKTKLTPEAKTKHVQGVLNMIRNCNYVIQ 185
           + ++DD  FF+MVE FF++ A + E +L++  KT+   E K   V+G+L +I+ CN+V+ 
Sbjct: 58  TDREDDPNFFKMVEGFFDRGASIVEDKLVEDLKTRENEEQKRNRVRGILRIIKPCNHVLS 117

Query: 186 INFPIRRDDGSFEIIQGWRAQHSLHRTPCKGGIRYSMDVSKDEVKALAALMTYKCAVVDV 365
           ++FPIRRDDGS+E+I+G+RAQHS HRTPCKGGIRYS DVS DEVKALA+LMTYKCAVVDV
Sbjct: 118 LSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDV 177

Query: 366 PFGGAKAGLRIDPRLYTVGELERITRRFTVELAKKNFIGPGVDVPAPDMGTGEREMAWIA 545
           PFGGAKAG++I+P+ YT  ELE+ITRRFT+ELAKK FIGPG+DVPAPDM TGEREM+WIA
Sbjct: 178 PFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGIDVPAPDMSTGEREMSWIA 237

Query: 546 NTFAHTRGDNDLHASACVTGKPISQGGIHGRISATGRGVYHGIENFIHNPDMVDKLGITP 725
           +T+A T G  D++A ACVTGKPISQGGIHGRISATGRGV+HGIENFI+    +  LG+TP
Sbjct: 238 DTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTP 297

Query: 726 GFKDKTFIIQGFGNVGLHSMRYLVR 800
           G  DKTF++QGFGNVGLHSMRYL R
Sbjct: 298 GLGDKTFVVQGFGNVGLHSMRYLHR 322

>sp|P82264|DHE3_CHAAC GLutamate dehydrogenase (GDH)
          Length = 504

 Score =  379 bits (974), Expect = e-105
 Identities = 178/265 (67%), Positives = 222/265 (83%)
 Frame = +3

Query: 6   SQQKDDVKFFEMVEYFFNKAARVCEGELIKADKTKLTPEAKTKHVQGVLNMIRNCNYVIQ 185
           + + DD  FF MVE FF++ A + E +L++  +TK TPE K   V G+L +I+ CN+V+ 
Sbjct: 4   ADKPDDPNFFRMVEGFFDRGASIVEDKLVEDLRTKETPEQKKGRVAGILRIIKPCNHVLS 63

Query: 186 INFPIRRDDGSFEIIQGWRAQHSLHRTPCKGGIRYSMDVSKDEVKALAALMTYKCAVVDV 365
           ++FPI+RD+G +E+I+G+RAQHS HRTPCKGGIRYSMDVS DEVKALA+LMTYKCAVVDV
Sbjct: 64  LSFPIKRDNGEWEVIEGYRAQHSQHRTPCKGGIRYSMDVSVDEVKALASLMTYKCAVVDV 123

Query: 366 PFGGAKAGLRIDPRLYTVGELERITRRFTVELAKKNFIGPGVDVPAPDMGTGEREMAWIA 545
           PFGGAKAG+RI+ + Y+  ELE+ITRRFT+ELAKK FIGPG+DVPAPDM TGEREM+WIA
Sbjct: 124 PFGGAKAGVRINTKNYSDNELEKITRRFTIELAKKGFIGPGIDVPAPDMSTGEREMSWIA 183

Query: 546 NTFAHTRGDNDLHASACVTGKPISQGGIHGRISATGRGVYHGIENFIHNPDMVDKLGITP 725
           +T+A+T    D++A ACVTGKPISQGGIHGRISATGRGV+HGIENF++    +  +G+TP
Sbjct: 184 DTYANTIAHTDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFMNEASYMSMVGLTP 243

Query: 726 GFKDKTFIIQGFGNVGLHSMRYLVR 800
           G +DKTF+IQGFGNVGLHSMRYL R
Sbjct: 244 GVQDKTFVIQGFGNVGLHSMRYLHR 268

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,593,692
Number of Sequences: 369166
Number of extensions: 1957039
Number of successful extensions: 5570
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5418
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7570361805
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00534

  1. Dr_sW_013_N12
  2. Dr_sW_016_O16