Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_013_N12
(790 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P49448|DHE4_HUMAN Glutamate dehydrogenase 2, mitochondri... 383 e-106
sp|Q64HZ8|DHE4_PANTR Glutamate dehydrogenase 2, mitochondri... 383 e-106
sp|Q64HZ9|DHE4_HYLLA Glutamate dehydrogenase 2, mitochondri... 383 e-106
sp|Q64I01|DHE4_GORGO Glutamate dehydrogenase 2, mitochondri... 381 e-105
sp|Q64I00|DHE4_PONPY Glutamate dehydrogenase 2, mitochondri... 381 e-105
sp|P26443|DHE3_MOUSE Glutamate dehydrogenase 1, mitochondri... 380 e-105
sp|P00366|DHE3_BOVIN Glutamate dehydrogenase 1, mitochondri... 380 e-105
sp|P00367|DHE3_HUMAN Glutamate dehydrogenase 1, mitochondri... 379 e-105
sp|P10860|DHE3_RAT Glutamate dehydrogenase 1, mitochondrial... 378 e-104
sp|P82264|DHE3_CHAAC GLutamate dehydrogenase (GDH) 374 e-103
>sp|P49448|DHE4_HUMAN Glutamate dehydrogenase 2, mitochondrial precursor (GDH)
Length = 558
Score = 383 bits (983), Expect = e-106
Identities = 180/261 (68%), Positives = 223/261 (85%)
Frame = +3
Query: 6 SQQKDDVKFFEMVEYFFNKAARVCEGELIKADKTKLTPEAKTKHVQGVLNMIRNCNYVIQ 185
+ ++DD FF+MVE FF++ A + E +L+K +T+ + E K V+G+L +I+ CN+V+
Sbjct: 58 ADREDDPNFFKMVEGFFDRGASIVEDKLVKDLRTQESEEQKRNRVRGILRIIKPCNHVLS 117
Query: 186 INFPIRRDDGSFEIIQGWRAQHSLHRTPCKGGIRYSMDVSKDEVKALAALMTYKCAVVDV 365
++FPIRRDDGS+E+I+G+RAQHS HRTPCKGGIRYS DVS DEVKALA+LMTYKCAVVDV
Sbjct: 118 LSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDV 177
Query: 366 PFGGAKAGLRIDPRLYTVGELERITRRFTVELAKKNFIGPGVDVPAPDMGTGEREMAWIA 545
PFGGAKAG++I+P+ YT ELE+ITRRFT+ELAKK FIGPGVDVPAPDM TGEREM+WIA
Sbjct: 178 PFGGAKAGVKINPKNYTENELEKITRRFTMELAKKGFIGPGVDVPAPDMNTGEREMSWIA 237
Query: 546 NTFAHTRGDNDLHASACVTGKPISQGGIHGRISATGRGVYHGIENFIHNPDMVDKLGITP 725
+T+A T G D++A ACVTGKPISQGGIHGRISATGRGV+HGIENFI+ + LG+TP
Sbjct: 238 DTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTP 297
Query: 726 GFKDKTFIIQGFGNVGLHSMR 788
GF+DKTF++QGFGNVGLHSMR
Sbjct: 298 GFRDKTFVVQGFGNVGLHSMR 318
>sp|Q64HZ8|DHE4_PANTR Glutamate dehydrogenase 2, mitochondrial precursor (GDH)
Length = 558
Score = 383 bits (983), Expect = e-106
Identities = 180/261 (68%), Positives = 223/261 (85%)
Frame = +3
Query: 6 SQQKDDVKFFEMVEYFFNKAARVCEGELIKADKTKLTPEAKTKHVQGVLNMIRNCNYVIQ 185
+ ++DD FF+MVE FF++ A + E +L+K +T+ + E K V+G+L +I+ CN+V+
Sbjct: 58 ADREDDPNFFKMVEGFFDRGASIVEDKLVKDLRTQESEEQKRNRVRGILRIIKPCNHVLS 117
Query: 186 INFPIRRDDGSFEIIQGWRAQHSLHRTPCKGGIRYSMDVSKDEVKALAALMTYKCAVVDV 365
++FPIRRDDGS+E+I+G+RAQHS HRTPCKGGIRYS DVS DEVKALA+LMTYKCAVVDV
Sbjct: 118 LSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDV 177
Query: 366 PFGGAKAGLRIDPRLYTVGELERITRRFTVELAKKNFIGPGVDVPAPDMGTGEREMAWIA 545
PFGGAKAG++I+P+ YT ELE+ITRRFT+ELAKK FIGPGVDVPAPDM TGEREM+WIA
Sbjct: 178 PFGGAKAGVKINPKNYTENELEKITRRFTMELAKKGFIGPGVDVPAPDMNTGEREMSWIA 237
Query: 546 NTFAHTRGDNDLHASACVTGKPISQGGIHGRISATGRGVYHGIENFIHNPDMVDKLGITP 725
+T+A T G D++A ACVTGKPISQGGIHGRISATGRGV+HGIENFI+ + LG+TP
Sbjct: 238 DTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTP 297
Query: 726 GFKDKTFIIQGFGNVGLHSMR 788
GF+DKTF++QGFGNVGLHSMR
Sbjct: 298 GFRDKTFVVQGFGNVGLHSMR 318
>sp|Q64HZ9|DHE4_HYLLA Glutamate dehydrogenase 2, mitochondrial precursor (GDH)
Length = 555
Score = 383 bits (983), Expect = e-106
Identities = 180/261 (68%), Positives = 222/261 (85%)
Frame = +3
Query: 6 SQQKDDVKFFEMVEYFFNKAARVCEGELIKADKTKLTPEAKTKHVQGVLNMIRNCNYVIQ 185
+ +KDD FF+MVE FF++ A + E +L+K +T+ + E K V+G+L +I+ CN+V+
Sbjct: 55 ADRKDDPNFFKMVEGFFDRGASIVEDKLVKDLRTRESEEQKRNRVRGILRIIKPCNHVLS 114
Query: 186 INFPIRRDDGSFEIIQGWRAQHSLHRTPCKGGIRYSMDVSKDEVKALAALMTYKCAVVDV 365
++FPIRRDDGS+E+I+G+RAQHS HRTPCKGGIRYS DVS DEVKALA+LMTYKCAVVDV
Sbjct: 115 LSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSADVSVDEVKALASLMTYKCAVVDV 174
Query: 366 PFGGAKAGLRIDPRLYTVGELERITRRFTVELAKKNFIGPGVDVPAPDMGTGEREMAWIA 545
PFGGAKAG++I+P+ YT ELE+ITRRFT+ELAKK FIGPG+DVPAPDM TGEREM+WIA
Sbjct: 175 PFGGAKAGVKINPKNYTENELEKITRRFTMELAKKGFIGPGIDVPAPDMNTGEREMSWIA 234
Query: 546 NTFAHTRGDNDLHASACVTGKPISQGGIHGRISATGRGVYHGIENFIHNPDMVDKLGITP 725
+T+A T G D++A ACVTGKPISQGGIHGRISATGRGV+HGIENFI+ + LG+TP
Sbjct: 235 DTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTP 294
Query: 726 GFKDKTFIIQGFGNVGLHSMR 788
GF DKTF++QGFGNVGLHSMR
Sbjct: 295 GFGDKTFVVQGFGNVGLHSMR 315
>sp|Q64I01|DHE4_GORGO Glutamate dehydrogenase 2, mitochondrial precursor (GDH)
Length = 558
Score = 381 bits (979), Expect = e-105
Identities = 180/261 (68%), Positives = 222/261 (85%)
Frame = +3
Query: 6 SQQKDDVKFFEMVEYFFNKAARVCEGELIKADKTKLTPEAKTKHVQGVLNMIRNCNYVIQ 185
+ ++DD FF+MVE FF++ A + E +L+K +T+ + E K V+G+L +I+ CN+V+
Sbjct: 58 ADREDDPNFFKMVEGFFDRGASIVEDKLVKDLRTQESEEQKRNRVRGILRIIKPCNHVLS 117
Query: 186 INFPIRRDDGSFEIIQGWRAQHSLHRTPCKGGIRYSMDVSKDEVKALAALMTYKCAVVDV 365
+ FPIRRDDGS+E+I+G+RAQHS HRTPCKGGIRYS DVS DEVKALA+LMTYKCAVVDV
Sbjct: 118 LCFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDV 177
Query: 366 PFGGAKAGLRIDPRLYTVGELERITRRFTVELAKKNFIGPGVDVPAPDMGTGEREMAWIA 545
PFGGAKAG++I+P+ YT ELE+ITRRFT+ELAKK FIGPGVDVPAPDM TGEREM+WIA
Sbjct: 178 PFGGAKAGVKINPKNYTENELEKITRRFTMELAKKGFIGPGVDVPAPDMNTGEREMSWIA 237
Query: 546 NTFAHTRGDNDLHASACVTGKPISQGGIHGRISATGRGVYHGIENFIHNPDMVDKLGITP 725
+T+A T G D++A ACVTGKPISQGGIHGRISATGRGV+HGIENFI+ + LG+TP
Sbjct: 238 DTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTP 297
Query: 726 GFKDKTFIIQGFGNVGLHSMR 788
GF+DKTF++QGFGNVGLHSMR
Sbjct: 298 GFRDKTFVVQGFGNVGLHSMR 318
>sp|Q64I00|DHE4_PONPY Glutamate dehydrogenase 2, mitochondrial precursor (GDH)
Length = 558
Score = 381 bits (978), Expect = e-105
Identities = 178/261 (68%), Positives = 222/261 (85%)
Frame = +3
Query: 6 SQQKDDVKFFEMVEYFFNKAARVCEGELIKADKTKLTPEAKTKHVQGVLNMIRNCNYVIQ 185
+ ++DD FF+MVE FF++ A + E +L+K +T+ + E K V+G+L +I+ CN+V+
Sbjct: 58 ADREDDPNFFKMVEGFFDRGASIVEDKLVKDLRTQESEEQKRNRVRGILRIIKPCNHVLS 117
Query: 186 INFPIRRDDGSFEIIQGWRAQHSLHRTPCKGGIRYSMDVSKDEVKALAALMTYKCAVVDV 365
++FPIRRDDGS+E+I+G+RAQHS HRTPCKGGIRYS DVS DEVKALA+LMTYKCAVVDV
Sbjct: 118 LSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDV 177
Query: 366 PFGGAKAGLRIDPRLYTVGELERITRRFTVELAKKNFIGPGVDVPAPDMGTGEREMAWIA 545
PFGGAKAG++I+P+ YT ELE+ITRRFT+ELAKK FIGPG+DVPAPDM TGEREM+WIA
Sbjct: 178 PFGGAKAGVKINPKNYTENELEKITRRFTMELAKKGFIGPGIDVPAPDMNTGEREMSWIA 237
Query: 546 NTFAHTRGDNDLHASACVTGKPISQGGIHGRISATGRGVYHGIENFIHNPDMVDKLGITP 725
+T+A T G D++A ACVTGKPISQGGIHGRISATGRGV+HGIENFI+ + +G+TP
Sbjct: 238 DTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSNVGMTP 297
Query: 726 GFKDKTFIIQGFGNVGLHSMR 788
GF DKTF++QGFGNVGLHSMR
Sbjct: 298 GFGDKTFVVQGFGNVGLHSMR 318
>sp|P26443|DHE3_MOUSE Glutamate dehydrogenase 1, mitochondrial precursor (GDH)
Length = 558
Score = 380 bits (977), Expect = e-105
Identities = 179/261 (68%), Positives = 222/261 (85%)
Frame = +3
Query: 6 SQQKDDVKFFEMVEYFFNKAARVCEGELIKADKTKLTPEAKTKHVQGVLNMIRNCNYVIQ 185
+ ++DD FF+MVE FF++ A + E +L++ KT+ + E K V+G+L +I+ CN+V+
Sbjct: 58 ADREDDPNFFKMVEGFFDRGASIVEDKLVEDLKTRESEEQKRNRVRGILRIIKPCNHVLS 117
Query: 186 INFPIRRDDGSFEIIQGWRAQHSLHRTPCKGGIRYSMDVSKDEVKALAALMTYKCAVVDV 365
++FPIRRDDGS+E+I+G+RAQHS HRTPCKGGIRYS DVS DEVKALA+LMTYKCAVVDV
Sbjct: 118 LSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDV 177
Query: 366 PFGGAKAGLRIDPRLYTVGELERITRRFTVELAKKNFIGPGVDVPAPDMGTGEREMAWIA 545
PFGGAKAG++I+P+ YT ELE+ITRRFT+ELAKK FIGPG+DVPAPDM TGEREM+WIA
Sbjct: 178 PFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGIDVPAPDMSTGEREMSWIA 237
Query: 546 NTFAHTRGDNDLHASACVTGKPISQGGIHGRISATGRGVYHGIENFIHNPDMVDKLGITP 725
+T+A T G D++A ACVTGKPISQGGIHGRISATGRGV+HGIENFI+ + LG+TP
Sbjct: 238 DTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTP 297
Query: 726 GFKDKTFIIQGFGNVGLHSMR 788
GF DKTF++QGFGNVGLHSMR
Sbjct: 298 GFGDKTFVVQGFGNVGLHSMR 318
>sp|P00366|DHE3_BOVIN Glutamate dehydrogenase 1, mitochondrial precursor (GDH)
Length = 558
Score = 380 bits (976), Expect = e-105
Identities = 180/261 (68%), Positives = 221/261 (84%)
Frame = +3
Query: 6 SQQKDDVKFFEMVEYFFNKAARVCEGELIKADKTKLTPEAKTKHVQGVLNMIRNCNYVIQ 185
+ ++DD FF+MVE FF++ A + E +L++ KT+ T E K V+ +L +I+ CN+V+
Sbjct: 58 ADREDDPNFFKMVEGFFDRGASIVEDKLVEDLKTRETEEQKRNRVRSILRIIKPCNHVLS 117
Query: 186 INFPIRRDDGSFEIIQGWRAQHSLHRTPCKGGIRYSMDVSKDEVKALAALMTYKCAVVDV 365
++FPIRRDDGS+E+I+G+RAQHS HRTPCKGGIRYS DVS DEVKALA+LMTYKCAVVDV
Sbjct: 118 LSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDV 177
Query: 366 PFGGAKAGLRIDPRLYTVGELERITRRFTVELAKKNFIGPGVDVPAPDMGTGEREMAWIA 545
PFGGAKAG++I+P+ YT ELE+ITRRFT+ELAKK FIGPGVDVPAPDM TGEREM+WIA
Sbjct: 178 PFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIA 237
Query: 546 NTFAHTRGDNDLHASACVTGKPISQGGIHGRISATGRGVYHGIENFIHNPDMVDKLGITP 725
+T+A T G D++A ACVTGKPISQGGIHGRISATGRGV+HGIENFI+ + LG+TP
Sbjct: 238 DTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTP 297
Query: 726 GFKDKTFIIQGFGNVGLHSMR 788
GF DKTF++QGFGNVGLHSMR
Sbjct: 298 GFGDKTFVVQGFGNVGLHSMR 318
>sp|P00367|DHE3_HUMAN Glutamate dehydrogenase 1, mitochondrial precursor (GDH)
Length = 558
Score = 379 bits (974), Expect = e-105
Identities = 178/261 (68%), Positives = 222/261 (85%)
Frame = +3
Query: 6 SQQKDDVKFFEMVEYFFNKAARVCEGELIKADKTKLTPEAKTKHVQGVLNMIRNCNYVIQ 185
+ ++DD FF+MVE FF++ A + E +L++ +T+ + E K V+G+L +I+ CN+V+
Sbjct: 58 ADREDDPNFFKMVEGFFDRGASIVEDKLVEDLRTRESEEQKRNRVRGILRIIKPCNHVLS 117
Query: 186 INFPIRRDDGSFEIIQGWRAQHSLHRTPCKGGIRYSMDVSKDEVKALAALMTYKCAVVDV 365
++FPIRRDDGS+E+I+G+RAQHS HRTPCKGGIRYS DVS DEVKALA+LMTYKCAVVDV
Sbjct: 118 LSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDV 177
Query: 366 PFGGAKAGLRIDPRLYTVGELERITRRFTVELAKKNFIGPGVDVPAPDMGTGEREMAWIA 545
PFGGAKAG++I+P+ YT ELE+ITRRFT+ELAKK FIGPG+DVPAPDM TGEREM+WIA
Sbjct: 178 PFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGIDVPAPDMSTGEREMSWIA 237
Query: 546 NTFAHTRGDNDLHASACVTGKPISQGGIHGRISATGRGVYHGIENFIHNPDMVDKLGITP 725
+T+A T G D++A ACVTGKPISQGGIHGRISATGRGV+HGIENFI+ + LG+TP
Sbjct: 238 DTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTP 297
Query: 726 GFKDKTFIIQGFGNVGLHSMR 788
GF DKTF++QGFGNVGLHSMR
Sbjct: 298 GFGDKTFVVQGFGNVGLHSMR 318
>sp|P10860|DHE3_RAT Glutamate dehydrogenase 1, mitochondrial precursor (GDH)
(Memory-related protein 2) (MRG-2)
Length = 558
Score = 378 bits (970), Expect = e-104
Identities = 178/261 (68%), Positives = 220/261 (84%)
Frame = +3
Query: 6 SQQKDDVKFFEMVEYFFNKAARVCEGELIKADKTKLTPEAKTKHVQGVLNMIRNCNYVIQ 185
+ ++DD FF+MVE FF++ A + E +L++ KT+ E K V+G+L +I+ CN+V+
Sbjct: 58 TDREDDPNFFKMVEGFFDRGASIVEDKLVEDLKTRENEEQKRNRVRGILRIIKPCNHVLS 117
Query: 186 INFPIRRDDGSFEIIQGWRAQHSLHRTPCKGGIRYSMDVSKDEVKALAALMTYKCAVVDV 365
++FPIRRDDGS+E+I+G+RAQHS HRTPCKGGIRYS DVS DEVKALA+LMTYKCAVVDV
Sbjct: 118 LSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDV 177
Query: 366 PFGGAKAGLRIDPRLYTVGELERITRRFTVELAKKNFIGPGVDVPAPDMGTGEREMAWIA 545
PFGGAKAG++I+P+ YT ELE+ITRRFT+ELAKK FIGPG+DVPAPDM TGEREM+WIA
Sbjct: 178 PFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGIDVPAPDMSTGEREMSWIA 237
Query: 546 NTFAHTRGDNDLHASACVTGKPISQGGIHGRISATGRGVYHGIENFIHNPDMVDKLGITP 725
+T+A T G D++A ACVTGKPISQGGIHGRISATGRGV+HGIENFI+ + LG+TP
Sbjct: 238 DTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTP 297
Query: 726 GFKDKTFIIQGFGNVGLHSMR 788
G DKTF++QGFGNVGLHSMR
Sbjct: 298 GLGDKTFVVQGFGNVGLHSMR 318
>sp|P82264|DHE3_CHAAC GLutamate dehydrogenase (GDH)
Length = 504
Score = 374 bits (961), Expect = e-103
Identities = 175/261 (67%), Positives = 219/261 (83%)
Frame = +3
Query: 6 SQQKDDVKFFEMVEYFFNKAARVCEGELIKADKTKLTPEAKTKHVQGVLNMIRNCNYVIQ 185
+ + DD FF MVE FF++ A + E +L++ +TK TPE K V G+L +I+ CN+V+
Sbjct: 4 ADKPDDPNFFRMVEGFFDRGASIVEDKLVEDLRTKETPEQKKGRVAGILRIIKPCNHVLS 63
Query: 186 INFPIRRDDGSFEIIQGWRAQHSLHRTPCKGGIRYSMDVSKDEVKALAALMTYKCAVVDV 365
++FPI+RD+G +E+I+G+RAQHS HRTPCKGGIRYSMDVS DEVKALA+LMTYKCAVVDV
Sbjct: 64 LSFPIKRDNGEWEVIEGYRAQHSQHRTPCKGGIRYSMDVSVDEVKALASLMTYKCAVVDV 123
Query: 366 PFGGAKAGLRIDPRLYTVGELERITRRFTVELAKKNFIGPGVDVPAPDMGTGEREMAWIA 545
PFGGAKAG+RI+ + Y+ ELE+ITRRFT+ELAKK FIGPG+DVPAPDM TGEREM+WIA
Sbjct: 124 PFGGAKAGVRINTKNYSDNELEKITRRFTIELAKKGFIGPGIDVPAPDMSTGEREMSWIA 183
Query: 546 NTFAHTRGDNDLHASACVTGKPISQGGIHGRISATGRGVYHGIENFIHNPDMVDKLGITP 725
+T+A+T D++A ACVTGKPISQGGIHGRISATGRGV+HGIENF++ + +G+TP
Sbjct: 184 DTYANTIAHTDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFMNEASYMSMVGLTP 243
Query: 726 GFKDKTFIIQGFGNVGLHSMR 788
G +DKTF+IQGFGNVGLHSMR
Sbjct: 244 GVQDKTFVIQGFGNVGLHSMR 264
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,256,922
Number of Sequences: 369166
Number of extensions: 1926780
Number of successful extensions: 5481
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5329
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7454154400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)