Planaria EST Database


DrC_00527

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00527
         (789 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P54578|UBP14_HUMAN  Ubiquitin carboxyl-terminal hydrolase...   202   1e-51
sp|P60051|UBP14_PANTR  Ubiquitin carboxyl-terminal hydrolase...   202   1e-51
sp|P40826|UBP14_RABIT  Ubiquitin carboxyl-terminal hydrolase...   201   2e-51
sp|Q9JMA1|UBP14_MOUSE  Ubiquitin carboxyl-terminal hydrolase...   199   6e-51
sp|Q17361|UBP14_CAEEL  Ubiquitin carboxyl-terminal hydrolase...   120   4e-27
sp|Q92353|UBP6_SCHPO  Probable ubiquitin carboxyl-terminal h...   106   8e-23
sp|P43593|UBP6_YEAST  Ubiquitin carboxyl-terminal hydrolase ...    86   1e-16
sp|Q9BXU7|UBP26_HUMAN  Ubiquitin carboxyl-terminal hydrolase...    44   4e-04
sp|Q9P275|UBP36_HUMAN  Ubiquitin carboxyl-terminal hydrolase...    43   9e-04
sp|Q09931|UBPY_CAEEL  Probable ubiquitin carboxyl-terminal h...    42   0.002
>sp|P54578|UBP14_HUMAN Ubiquitin carboxyl-terminal hydrolase 14 (Ubiquitin thiolesterase
           14) (Ubiquitin-specific processing protease 14)
           (Deubiquitinating enzyme 14)
          Length = 494

 Score =  202 bits (513), Expect = 1e-51
 Identities = 111/268 (41%), Positives = 160/268 (59%), Gaps = 9/268 (3%)
 Frame = +3

Query: 12  MPVYKVNIKWQKEKFNDIECDTDQPPEIFKALIFSLSGVTPDRQKVMMPGGTLKNT-WDG 188
           MP+Y V +KW KEKF  +E +TD+PP +FKA +F+L+GV P RQKVM+ GGTLK+  W  
Sbjct: 1   MPLYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDDDWGN 60

Query: 189 IRLKDGITIMMMGTCDDLSLGEINKPKFIEDMTESQITKALKLPQGLKNIGNTCYLNATI 368
           I++K+G+T++MMG+ D L      K  F+EDMTE Q+  A++LP GL N+GNTCY+NAT+
Sbjct: 61  IKIKNGMTLLMMGSADALPEEPSAKTVFVEDMTEEQLASAMELPCGLTNLGNTCYMNATV 120

Query: 369 QCLRTIPELYKAIKNSP----KTNESDPHSRFVLSLGRLILSMETAEVPIAPIIPLKHLH 536
           QC+R++PEL  A+K        + E         +L  L  SM+     I PII L+ LH
Sbjct: 121 QCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTSSSIPPIILLQFLH 180

Query: 537 EMCPQFATTQVAAPEQGGGSVLMQQDANECWAEIVRSLQKAVYIPQNVDFSDLPESFGS- 713
              PQFA       E+G     +QQDANECW +++R LQ+ +   ++    +   S  S 
Sbjct: 181 MAFPQFA-------EKGEQGQYLQQDANECWIQMMRVLQQKLEAIEDDSVKETDSSSASA 233

Query: 714 ---NGNLNFVDQFLTGKFDVKTVNTENE 788
              +   + +DQF   +F+     TE+E
Sbjct: 234 ATPSKKKSLIDQFFGVEFETTMKCTESE 261
>sp|P60051|UBP14_PANTR Ubiquitin carboxyl-terminal hydrolase 14 (Ubiquitin thiolesterase
           14) (Ubiquitin-specific processing protease 14)
           (Deubiquitinating enzyme 14)
          Length = 493

 Score =  202 bits (513), Expect = 1e-51
 Identities = 111/268 (41%), Positives = 160/268 (59%), Gaps = 9/268 (3%)
 Frame = +3

Query: 12  MPVYKVNIKWQKEKFNDIECDTDQPPEIFKALIFSLSGVTPDRQKVMMPGGTLKNT-WDG 188
           MP+Y V +KW KEKF  +E +TD+PP +FKA +F+L+GV P RQKVM+ GGTLK+  W  
Sbjct: 1   MPLYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDDDWGN 60

Query: 189 IRLKDGITIMMMGTCDDLSLGEINKPKFIEDMTESQITKALKLPQGLKNIGNTCYLNATI 368
           I++K+G+T++MMG+ D L      K  F+EDMTE Q+  A++LP GL N+GNTCY+NAT+
Sbjct: 61  IKIKNGMTLLMMGSADALPEEPSAKTVFVEDMTEEQLASAMELPCGLTNLGNTCYMNATV 120

Query: 369 QCLRTIPELYKAIKNSP----KTNESDPHSRFVLSLGRLILSMETAEVPIAPIIPLKHLH 536
           QC+R++PEL  A+K        + E         +L  L  SM+     I PII L+ LH
Sbjct: 121 QCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTSSSIPPIILLQFLH 180

Query: 537 EMCPQFATTQVAAPEQGGGSVLMQQDANECWAEIVRSLQKAVYIPQNVDFSDLPESFGS- 713
              PQFA       E+G     +QQDANECW +++R LQ+ +   ++    +   S  S 
Sbjct: 181 MAFPQFA-------EKGEQGQYLQQDANECWIQMMRVLQQKLEAIEDDSVKETDSSSASA 233

Query: 714 ---NGNLNFVDQFLTGKFDVKTVNTENE 788
              +   + +DQF   +F+     TE+E
Sbjct: 234 ATPSKKKSLIDQFFGVEFETTMKCTESE 261
>sp|P40826|UBP14_RABIT Ubiquitin carboxyl-terminal hydrolase 14 (Ubiquitin thiolesterase
           14) (Ubiquitin-specific processing protease 14)
           (Deubiquitinating enzyme 14)
          Length = 493

 Score =  201 bits (510), Expect = 2e-51
 Identities = 110/267 (41%), Positives = 160/267 (59%), Gaps = 8/267 (2%)
 Frame = +3

Query: 12  MPVYKVNIKWQKEKFNDIECDTDQPPEIFKALIFSLSGVTPDRQKVMMPGGTLKNT-WDG 188
           MP+Y V +KW KEKF  +E +TD+PP +FKA +F+L+GV P RQ+VM+ GGTLK+  W  
Sbjct: 1   MPLYSVTVKWGKEKFGGVELNTDEPPMVFKAQLFALTGVQPARQRVMVKGGTLKDDDWGN 60

Query: 189 IRLKDGITIMMMGTCDDLSLGEINKPKFIEDMTESQITKALKLPQGLKNIGNTCYLNATI 368
           I++K+G+TI+MMG+ D L      K  F+EDMTE Q+  A++LP GL N+GNTCY+NAT+
Sbjct: 61  IKIKNGMTILMMGSADALPEEPSAKTVFVEDMTEEQLASAMELPCGLTNLGNTCYMNATV 120

Query: 369 QCLRTIPELYKAIKNSP----KTNESDPHSRFVLSLGRLILSMETAEVPIAPIIPLKHLH 536
           QC+R++PEL  A+K        + E         +L  L  SM+     I PII L+ LH
Sbjct: 121 QCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTSSSIPPIILLQFLH 180

Query: 537 EMCPQFATTQVAAPEQGGGSVLMQQDANECWAEIVRSLQKAVYIPQNVDFSDLPESFGS- 713
              PQFA       E+G     +QQDANECW +++R LQ+ +   ++    +   S  + 
Sbjct: 181 MAFPQFA-------EKGEQGQYLQQDANECWIQMMRVLQQKLEAIEDDSVKETDSSAAAV 233

Query: 714 --NGNLNFVDQFLTGKFDVKTVNTENE 788
             +   + +DQF   +F+     TE+E
Sbjct: 234 APSKKKSLIDQFFGVEFETTMKCTESE 260
>sp|Q9JMA1|UBP14_MOUSE Ubiquitin carboxyl-terminal hydrolase 14 (Ubiquitin thiolesterase
           14) (Ubiquitin-specific processing protease 14)
           (Deubiquitinating enzyme 14)
          Length = 493

 Score =  199 bits (507), Expect = 6e-51
 Identities = 112/269 (41%), Positives = 160/269 (59%), Gaps = 10/269 (3%)
 Frame = +3

Query: 12  MPVYKVNIKWQKEKFNDIECDTDQPPEIFKALIFSLSGVTPDRQKVMMPGGTLKNT-WDG 188
           MP+Y V +KW KEKF  +E +TD+PP +FKA +F+L+GV P RQKVM+ GGTLK+  W  
Sbjct: 1   MPLYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDDDWGN 60

Query: 189 IRLKDGITIMMMGTCDDLSLGEINKPKFIEDMTESQITKALKLPQGLKNIGNTCYLNATI 368
           I++K+G+T++MMG+ D L      K  F+EDMTE Q+  A++LP GL N+GNTCY+NAT+
Sbjct: 61  IKMKNGMTVLMMGSADALPEEPSAKTVFVEDMTEEQLATAMELPCGLTNLGNTCYMNATV 120

Query: 369 QCLRTIPELYKAIKNSP----KTNESDPHSRFVLSLGRLILSMETAEVPIAPIIPLKHLH 536
           QC+R++PEL  A+K        + E         +L  L  SM+     I PII L+ LH
Sbjct: 121 QCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTSSSIPPIILLQFLH 180

Query: 537 EMCPQFATTQVAAPEQGGGSVLMQQDANECWAEIVRSLQKAVYIPQN-----VDFSDLPE 701
              PQFA       E+G     +QQDANECW +++R LQ+ +   ++      D S  P 
Sbjct: 181 MAFPQFA-------EKGEQGQYLQQDANECWIQMMRVLQQKLEAIEDDSGRETDSSSAPA 233

Query: 702 SFGSNGNLNFVDQFLTGKFDVKTVNTENE 788
              S    + +DQ+   +F+     TE+E
Sbjct: 234 VTPSK-KKSLIDQYFGVEFETTMKCTESE 261
>sp|Q17361|UBP14_CAEEL Ubiquitin carboxyl-terminal hydrolase 14 (Ubiquitin thiolesterase
           14) (Ubiquitin-specific processing protease 14)
           (Deubiquitinating enzyme 14)
          Length = 489

 Score =  120 bits (301), Expect = 4e-27
 Identities = 80/228 (35%), Positives = 121/228 (53%), Gaps = 13/228 (5%)
 Frame = +3

Query: 12  MPVYKVNIKWQKEKFNDIECDTDQPPEIFKALIFSLSGVTPDRQKVMMPGGTL-KNTWDG 188
           MP+  VN+KWQKEK+  +E DT  PP +FKA +F+L+ V P+RQKV++ G TL  + W+G
Sbjct: 1   MPI--VNVKWQKEKYV-VEVDTSAPPMVFKAQLFALTQVVPERQKVVIMGRTLGDDDWEG 57

Query: 189 IRLKDGITIMMMGTCDDLSLGEINKPKFIEDMTESQITKALK-----LPQGLKNIGNTCY 353
           I +K+ +TIMMMG     S+GEI KP  + +  ++   K  +      P GL N+GNTCY
Sbjct: 58  ITIKENMTIMMMG-----SVGEIPKPPTVLEKKQANRDKQAEEISALYPCGLANLGNTCY 112

Query: 354 LNATIQCLRTIPELYKAIKNSPKTNESDPHSRFVLSLGRLILSMETAE-------VPIAP 512
            N+ +Q L+ + EL   +K + +    + + R   +L  L  S+   +        PI P
Sbjct: 113 FNSCVQMLKEVNEL--VLKPAEEMRIREHNDRLCHNLATLFNSLRDKDRALRSKGEPIKP 170

Query: 513 IIPLKHLHEMCPQFATTQVAAPEQGGGSVLMQQDANECWAEIVRSLQK 656
              +  L +  PQF                 QQDANEC   I+ ++ +
Sbjct: 171 FAAILTLSDSFPQF-------------EKFKQQDANECLVSIMSNVTR 205
>sp|Q92353|UBP6_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 6 (Ubiquitin
           thiolesterase 6) (Ubiquitin-specific processing protease
           6) (Deubiquitinating enzyme 6)
          Length = 467

 Score =  106 bits (264), Expect = 8e-23
 Identities = 74/219 (33%), Positives = 116/219 (52%), Gaps = 7/219 (3%)
 Frame = +3

Query: 27  VNIKWQKEKFNDIECDTDQPPEIFKALIFSLSGVTPDRQKVMMPGGTLKNT--WDGIRLK 200
           + I+WQ +K+ D+E + ++     K  ++SL+ V P+RQKV++ GG LK+      + +K
Sbjct: 4   IAIRWQGKKY-DLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIK 62

Query: 201 DGITIMMMGTCDDLSLGEINKPKFIEDMTESQITKALKLPQGLKNIGNTCYLNATIQCLR 380
              T++MMGT  +L       P    +  E + ++    P GL N+GNTCY+N+T+Q LR
Sbjct: 63  PNATLLMMGTAGELPTA---MPIPAVESVEQEESEDDGYPSGLINLGNTCYMNSTVQMLR 119

Query: 381 TIPELYKAIKNSPKTNESDPHSRFVLSLG-----RLILSMETAEVPIAPIIPLKHLHEMC 545
            IPEL            SD  S+F  S G     R +L+   +  P+ P+  L+ L    
Sbjct: 120 AIPEL------------SDAVSQFNSSGGLVAEYRTLLNSMQSNAPVTPMRFLQSLRMEY 167

Query: 546 PQFATTQVAAPEQGGGSVLMQQDANECWAEIVRSLQKAV 662
           PQFA     + E GG     QQDA ECW+ ++  LQ+++
Sbjct: 168 PQFAE---MSRETGG---YAQQDAEECWSFLLSVLQRSL 200
>sp|P43593|UBP6_YEAST Ubiquitin carboxyl-terminal hydrolase 6 (Ubiquitin thiolesterase 6)
           (Ubiquitin-specific processing protease 6)
           (Deubiquitinating enzyme 6)
          Length = 499

 Score = 85.9 bits (211), Expect = 1e-16
 Identities = 73/229 (31%), Positives = 108/229 (47%), Gaps = 13/229 (5%)
 Frame = +3

Query: 3   SGEMPVYKVNIKWQKEKFNDIECDTDQPPEIFKALIFSLSGVTPDRQKVMMPGGTLKNTW 182
           SGE   ++ NI+    K   I   TD      K+    L+ V   RQK M+ GG      
Sbjct: 2   SGE--TFEFNIR-HSGKVYPITLSTDATSADLKSKAEELTQVPSARQKYMVKGGLSGEES 58

Query: 183 DGIR--LKDGITIMMMGTCD-DLSLGEINKPKFIEDMT-ESQITKALKLPQGLKNIGNTC 350
             I   +K G T+M++GT D +L      K  FIED+  E Q+ +  +LP G KN+GNTC
Sbjct: 59  IKIYPLIKPGSTVMLLGTPDANLISKPAKKNNFIEDLAPEQQVQQFAQLPVGFKNMGNTC 118

Query: 351 YLNATIQCLRTIPELYKAIKN--------SPKTNESDPHSRFVLSLGRLILSMETAEV-P 503
           YLNAT+Q L  + +L   I N        +    + + H + V+ + R   +++      
Sbjct: 119 YLNATLQALYRVNDLRDMILNYNPSQGVSNSGAQDEEIHKQIVIEMKRCFENLQNKSFKS 178

Query: 504 IAPIIPLKHLHEMCPQFATTQVAAPEQGGGSVLMQQDANECWAEIVRSL 650
           + PI+ L  L +  PQFA        QGG     QQDA E + ++  S+
Sbjct: 179 VLPIVLLNTLRKCYPQFAERD----SQGG--FYKQQDAEELFTQLFHSM 221
>sp|Q9BXU7|UBP26_HUMAN Ubiquitin carboxyl-terminal hydrolase 26 (Ubiquitin thiolesterase
           26) (Ubiquitin-specific processing protease 26)
           (Deubiquitinating enzyme 26)
          Length = 913

 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 23/71 (32%), Positives = 36/71 (50%)
 Frame = +3

Query: 312 KLPQGLKNIGNTCYLNATIQCLRTIPELYKAIKNSPKTNESDPHSRFVLSLGRLILSMET 491
           K+  GL N+GNTCY+NA +Q L +IP     + N        P +   + L RL+   +T
Sbjct: 292 KICHGLPNLGNTCYMNAVLQSLLSIPSFADDLLNQSFPWGKIPLNALTMCLARLLFFKDT 351

Query: 492 AEVPIAPIIPL 524
             + I  ++ L
Sbjct: 352 YNIEIKEMLLL 362
>sp|Q9P275|UBP36_HUMAN Ubiquitin carboxyl-terminal hydrolase 36 (Ubiquitin thiolesterase
           36) (Ubiquitin-specific processing protease 36)
           (Deubiquitinating enzyme 36)
          Length = 1121

 Score = 43.1 bits (100), Expect = 9e-04
 Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 2/121 (1%)
 Frame = +3

Query: 303 KALKLPQGLKNIGNTCYLNATIQCLRTIPEL--YKAIKNSPKTNESDPHSRFVLSLGRLI 476
           +  ++  GL N+GNTC+LNATIQCL   P L  Y   K   ++          +    ++
Sbjct: 116 RVFRVGAGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNHIV 175

Query: 477 LSMETAEVPIAPIIPLKHLHEMCPQFATTQVAAPEQGGGSVLMQQDANECWAEIVRSLQK 656
            +   +   I P+  ++ L ++   F                 Q+DA+E     + ++QK
Sbjct: 176 QAFANSGNAIKPVSFIRDLKKIARHFRFGN-------------QEDAHEFLRYTIDAMQK 222

Query: 657 A 659
           A
Sbjct: 223 A 223
>sp|Q09931|UBPY_CAEEL Probable ubiquitin carboxyl-terminal hydrolase K02C4.3 (Ubiquitin
           thiolesterase) (Ubiquitin-specific processing protease)
           (Deubiquitinating enzyme)
          Length = 1302

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 38/164 (23%), Positives = 70/164 (42%), Gaps = 15/164 (9%)
 Frame = +3

Query: 255 INKPKFIEDMTESQITKALKLPQGLKNIGNTCYLNATIQCLRTIPELYKAI--------K 410
           I++P  +    E  +        GL N GNTC+LN   Q L +IP+    +         
Sbjct: 178 ISRPTMLMSNLEDMVRNP-NFSTGLYNSGNTCWLNCLSQVLYSIPKFRSILYHCAPLSWH 236

Query: 411 NSPKTN---ESDPHSRFVLSLGRLILSMETAEVPIAPIIPLKHLHEMCPQFATTQVAAPE 581
             P TN   E+  H+  ++    L   ++ +E+    + PL ++          +++   
Sbjct: 237 EQPITNVKIENQQHAELLMLFRGLFAELQFSEMKYIEVGPLINM--------VDKLSKSS 288

Query: 582 QGGGSVLMQQDANECWAEIVRSLQK----AVYIPQNVDFSDLPE 701
           +G  ++  QQDA E    I   LQ+    A++   N +FS++ +
Sbjct: 289 KGPSTIGTQQDATEMLTLIFDWLQRAFDAALHAQLNPEFSNVSD 332
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,173,969
Number of Sequences: 369166
Number of extensions: 1862405
Number of successful extensions: 4465
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4446
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7454154400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00527

  1. Dr_sW_005_O10
  2. Dr_sW_013_M10