DrC_00518
- Cluster detail
- GO Category : Not Available
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_00518 (988 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|O32617|FTSH_HELFE Cell division protein ftsH homolog 32 2.1 sp|Q26656|HMX_STRPU Homeobox protein Hmx (SpHmx) (H6-like) 32 2.1 sp|P08799|MYS2_DICDI Myosin II heavy chain, non muscle 32 3.6 sp|P47029|YJI4_YEAST Hypothetical 117.2 kDa protein in EXO7... 32 3.6 sp|Q8BWJ3|KPB2_MOUSE Phosphorylase b kinase alpha regulator... 32 3.6 sp|Q8WT54|FAR1_WUCBA Fatty-acid and retinol-binding protein... 32 3.6 sp|Q962W7|FAR1_LOALO Fatty-acid and retinol-binding protein... 32 3.6 sp|P18106|FPS_DROME Tyrosine-protein kinase Fps85D (dFer) 31 4.7 sp|P41993|YKC2_CAEEL Hypothetical protein B0280.2 in chromo... 31 6.2 sp|Q8A455|SYE_BACTN Glutamyl-tRNA synthetase (Glutamate--tR... 31 6.2
>sp|O32617|FTSH_HELFE Cell division protein ftsH homolog Length = 638 Score = 32.3 bits (72), Expect = 2.1 Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 7/81 (8%) Frame = +1 Query: 460 ISEEKRNR---SDFESKSDWQERIALE----VKNFLRPAYMSKKITKSDYKEIMKRCVTK 618 + E++RN F S ++ E++A E +KN L Y+ K T SDYK+ ++ V + Sbjct: 542 VLEKQRNSFLGGGFGSGREFSEKMAEEMDSFIKNLLEERYVHVKQTLSDYKDAIEVMVNE 601 Query: 619 ISRSGVTEINTEKIEKFVLSY 681 + V I E++ + + Y Sbjct: 602 LFEKEV--ITGERVREIISEY 620
>sp|Q26656|HMX_STRPU Homeobox protein Hmx (SpHmx) (H6-like) Length = 405 Score = 32.3 bits (72), Expect = 2.1 Identities = 22/111 (19%), Positives = 47/111 (42%), Gaps = 2/111 (1%) Frame = +1 Query: 310 LPPLPNYSDVLKPLASSAAAIMANVSMPLPMSNTAQTNQSSKQLSSTSNEI--SEEKRNR 483 +P ++ + +PL +S+ MA P P + + + + S E SE +RN Sbjct: 176 MPAFNSHPPIAQPLTNSSRLAMAKDISPRPTQSHSSFGEEGGEKDSRGRESPDSEHRRNN 235 Query: 484 SDFESKSDWQERIALEVKNFLRPAYMSKKITKSDYKEIMKRCVTKISRSGV 636 E D ++ + K R + ++ + + +KR ++ R+G+ Sbjct: 236 GHEEDDDDDDDQSPQKKKKKTRTVFSRSQVFQLESTFEVKRYLSSSERAGL 286
>sp|P08799|MYS2_DICDI Myosin II heavy chain, non muscle Length = 2116 Score = 31.6 bits (70), Expect = 3.6 Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 4/102 (3%) Frame = +1 Query: 403 SNTAQTNQS-SKQLSSTSNEISEEKRNRSDFESKSDWQERIALEVKNFLRPAYMSKKI-- 573 SN ++ ++ QL + +NE+ EEK+NR E K + + E+K+ L KK Sbjct: 1083 SNVEKSKKTLESQLVAVNNELDEEKKNRDALEKKKKALDAMLEEMKDQLESTGGEKKSLY 1142 Query: 574 -TKSDYKEIMKRCVTKISRSGVTEINTEKIEKFVLSYVDKYQ 696 K + M+ +IS T EKI+ + V + Q Sbjct: 1143 DLKVKQESDMEALRNQISELQSTIAKLEKIKSTLEGEVARLQ 1184
>sp|P47029|YJI4_YEAST Hypothetical 117.2 kDa protein in EXO70-ARP4 intergenic region Length = 1046 Score = 31.6 bits (70), Expect = 3.6 Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 4/123 (3%) Frame = +1 Query: 295 NSDFILPPLPNYSDVLKPLASSAAAIMA----NVSMPLPMSNTAQTNQSSKQLSSTSNEI 462 N D L P +Y D+L+P + I A N S P+ N NQ S L S N + Sbjct: 921 NEDSFLRPNDSYVDLLEPSVDTTIDITAPYARNSSAWHPLQNDNDNNQFSPLLGSNENFL 980 Query: 463 SEEKRNRSDFESKSDWQERIALEVKNFLRPAYMSKKITKSDYKEIMKRCVTKISRSGVTE 642 + S ++SD I F + + +++ SD +E R ++++S Sbjct: 981 NAANAQNS---AESDHNNDI------FTQGSGLTESSKNSDSEE---RFISRLSSPEKVL 1028 Query: 643 INT 651 INT Sbjct: 1029 INT 1031
>sp|Q8BWJ3|KPB2_MOUSE Phosphorylase b kinase alpha regulatory chain, liver isoform (Phosphorylase kinase alpha L subunit) Length = 1235 Score = 31.6 bits (70), Expect = 3.6 Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Frame = +1 Query: 430 SKQLSSTSNEISEEKRNRSDFESKSDWQERIA---LEVKNFLRPAYMSKKITKSDYKEIM 600 ++ L+ + E SE N S F+ KS ++ V+ +RP + S E+ Sbjct: 929 ARSLNCSGKEASESLMNLSPFDMKSLLHHILSGKEFGVERSVRPIHSSMSSPAISIHEVG 988 Query: 601 KRCVTKISRSGVTEINTE 654 TK RSG+T + +E Sbjct: 989 HTGATKTERSGITRLRSE 1006
>sp|Q8WT54|FAR1_WUCBA Fatty-acid and retinol-binding protein 1 precursor (Wb-FAR-1) Length = 178 Score = 31.6 bits (70), Expect = 3.6 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 1/97 (1%) Frame = +1 Query: 409 TAQTNQSSKQLSSTSNEISEEKRNRSDFESKSDWQERIALEVKNFLRPAYMS-KKITKSD 585 T + + ++L+S + E ++KSD + A+E++NF++ S K K+ Sbjct: 46 TVEDKEILRELASKHATFANEDAALEALKAKSDNLYKNAVELRNFVKAKIDSLKPDAKTF 105 Query: 586 YKEIMKRCVTKISRSGVTEINTEKIEKFVLSYVDKYQ 696 EI+ + + S G +++TEKI++ + KYQ Sbjct: 106 VDEIIAKARSLRSDDG-HKLDTEKIKQAARDIIAKYQ 141
>sp|Q962W7|FAR1_LOALO Fatty-acid and retinol-binding protein 1 precursor (Ll-FAR-1) (Ll20) Length = 178 Score = 31.6 bits (70), Expect = 3.6 Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 1/97 (1%) Frame = +1 Query: 409 TAQTNQSSKQLSSTSNEISEEKRNRSDFESKSDWQERIALEVKNFLRPAYMS-KKITKSD 585 TA+ + + L+S + E + KSD + A+E++NF++ S K K+ Sbjct: 46 TAEDKEILRDLASKHATFANEDAALEALKDKSDKLYKNAVELRNFVKAKIDSLKPDAKAF 105 Query: 586 YKEIMKRCVTKISRSGVTEINTEKIEKFVLSYVDKYQ 696 E++ R + S G + +T+KI++ + KYQ Sbjct: 106 VDEVIARARSLRSDDG-QKFDTDKIKQAARDIIAKYQ 141
>sp|P18106|FPS_DROME Tyrosine-protein kinase Fps85D (dFer) Length = 1325 Score = 31.2 bits (69), Expect = 4.7 Identities = 22/62 (35%), Positives = 27/62 (43%) Frame = +1 Query: 493 ESKSDWQERIALEVKNFLRPAYMSKKITKSDYKEIMKRCVTKISRSGVTEINTEKIEKFV 672 E + QE L +N L+ A +T YKEI KR T I TE E EK+ Sbjct: 214 EHQQSVQESFILLWRNILQEAAQYGDLTADKYKEIQKRIDTVIGSINPTEEYGEFTEKYK 273 Query: 673 LS 678 S Sbjct: 274 TS 275
>sp|P41993|YKC2_CAEEL Hypothetical protein B0280.2 in chromosome III Length = 627 Score = 30.8 bits (68), Expect = 6.2 Identities = 24/120 (20%), Positives = 57/120 (47%), Gaps = 8/120 (6%) Frame = +1 Query: 349 LASSAAAIMANVSM--PLPMSNTAQTNQSSKQLSSTSNEISEEKRNRSDFESKSDWQERI 522 L+ S+ ++ +++M P P+ T++ +S L + +EI+ SKS+ Q + Sbjct: 502 LSDSSTSVAQDIAMKVPTPLPRTSKIISASSPLPPSQDEINPLIEMVDQSSSKSETQIPV 561 Query: 523 ALEVKNFLRPAYMSKKITKSDYKEIMKRCVT------KISRSGVTEINTEKIEKFVLSYV 684 ++ L + +I +D+ +++ + ++ K +S E+ IEK + +Y+ Sbjct: 562 TECSQSHLNGKGSAAQIQSADFDKVLNQLLSIKVNSEKSKQSADLELLLVSIEKLIQNYL 621
>sp|Q8A455|SYE_BACTN Glutamyl-tRNA synthetase (Glutamate--tRNA ligase) (GluRS) Length = 504 Score = 30.8 bits (68), Expect = 6.2 Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 2/50 (4%) Frame = +1 Query: 541 FLRPAYMSKKITKSDYKEIMKRCVTKISR--SGVTEINTEKIEKFVLSYV 684 F+ PA +K K +KE +C+T+++ +G+ + + E EK V+ ++ Sbjct: 404 FVAPAEYDEKTVKKRWKEDSAKCMTELAEVIAGIEDFSIEGQEKVVMDWI 453
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,779,887
Number of Sequences: 369166
Number of extensions: 1558674
Number of successful extensions: 4663
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4661
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 10383318715
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Cluster detail
