Planaria EST Database

DrC_00473

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00473
         (1152 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P06605|TBA3_DROME  Tubulin alpha-3 chain                       353   7e-97
sp|P06603|TBA1_DROME  Tubulin alpha-1 chain                       352   2e-96
sp|P30436|TBA_ONCKE  Tubulin alpha chain                          351   3e-96
sp|P68373|TBA6_MOUSE  Tubulin alpha-6 chain (Alpha-tubulin 6...   351   3e-96
sp|Q6AYZ1|TBA6_RAT  Tubulin alpha-6 chain (Alpha-tubulin 6)       351   3e-96
sp|Q9BQE3|TBA6_HUMAN  Tubulin alpha-6 chain (Alpha-tubulin 6)     350   4e-96
sp|Q91060|TBA_NOTVI  Tubulin alpha chain                          350   6e-96
sp|P08537|TBA_XENLA  Tubulin alpha chain                          349   7e-96
sp|P36220|TBA_TORMA  Tubulin alpha chain (Alpha T6)               349   1e-95
sp|Q6AY56|TBA8_RAT  Tubulin alpha-8 chain (Alpha-tubulin 8)       349   1e-95

>sp|P06605|TBA3_DROME Tubulin alpha-3 chain
          Length = 450

 Score =  353 bits (905), Expect = 7e-97
 Identities = 156/294 (53%), Positives = 219/294 (74%)
 Frame = +1

Query: 1    RIGVEYTKRPKFQVAIVPSNHMSTAVVEPYNSLLSLNASTEHAEICNMTDNEAVYQLLTS 180
            R+ V+Y K+ K + A+ P+  +STAVVEPYNS+L+ + + EH++   M DNEA+Y +   
Sbjct: 156  RLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 215

Query: 181  TLDISRPTYNNLNRVLAQVFSSLTVSLRYESLLNADFDQIITNLVPYPRIHYPVCNYSPI 360
             LDI RPTY NLNR++ Q+ SS+T SLR++  LN D  +  TNLVPYPRIH+P+  Y+P+
Sbjct: 216  NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV 275

Query: 361  VSVRRAEHEQLSTHEITRSIFDDHSQMVSIKMSDGKYMACCLQYRGNVAPKDVNQAVFEI 540
            +S  +A HEQLS  EIT + F+  +QMV +    GKYMACC+ YRG+V PKDVN A+  I
Sbjct: 276  ISAEKAYHEQLSVAEITNACFEPANQMVKVDPRHGKYMACCMLYRGDVVPKDVNAAIATI 335

Query: 541  KRRTDVKFVEWCPTGFKLGINCQPPTAVPGSELAQTLRSVTMLSNTTAVSQIWATIGRKF 720
            K +  ++FV+WCPTGFK+GIN QPPT VPG +LA+  R+V MLSNTTA+++ WA +  KF
Sbjct: 336  KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 395

Query: 721  DVLFSKRSFVHWYVGEGMEEGEFNEAKDEMTSLVQDYEEIAADEGGNDIEASKE 882
            D++++KR+FVHWYVGEGMEEGEF+EA++++ +L +DYEE+  D G  + E ++E
Sbjct: 396  DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGEGAEE 449

>sp|P06603|TBA1_DROME Tubulin alpha-1 chain
          Length = 450

 Score =  352 bits (902), Expect = 2e-96
 Identities = 157/294 (53%), Positives = 218/294 (74%)
 Frame = +1

Query: 1    RIGVEYTKRPKFQVAIVPSNHMSTAVVEPYNSLLSLNASTEHAEICNMTDNEAVYQLLTS 180
            R+ V+Y K+ K + AI P+  +STAVVEPYNS+L+ + + EH++   M DNEA+Y +   
Sbjct: 156  RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 215

Query: 181  TLDISRPTYNNLNRVLAQVFSSLTVSLRYESLLNADFDQIITNLVPYPRIHYPVCNYSPI 360
             LDI RPTY NLNR++ Q+ SS+T SLR++  LN D  +  TNLVPYPRIH+P+  Y+P+
Sbjct: 216  NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV 275

Query: 361  VSVRRAEHEQLSTHEITRSIFDDHSQMVSIKMSDGKYMACCLQYRGNVAPKDVNQAVFEI 540
            +S  +A HEQLS  EIT + F+  +QMV      GKYMACC+ YRG+V PKDVN A+  I
Sbjct: 276  ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATI 335

Query: 541  KRRTDVKFVEWCPTGFKLGINCQPPTAVPGSELAQTLRSVTMLSNTTAVSQIWATIGRKF 720
            K +  ++FV+WCPTGFK+GIN QPPT VPG +LA+  R+V MLSNTTA+++ WA +  KF
Sbjct: 336  KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 395

Query: 721  DVLFSKRSFVHWYVGEGMEEGEFNEAKDEMTSLVQDYEEIAADEGGNDIEASKE 882
            D++++KR+FVHWYVGEGMEEGEF+EA++++ +L +DYEE+  D G  + E ++E
Sbjct: 396  DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGEGAEE 449

>sp|P30436|TBA_ONCKE Tubulin alpha chain
          Length = 444

 Score =  351 bits (900), Expect = 3e-96
 Identities = 156/294 (53%), Positives = 217/294 (73%)
 Frame = +1

Query: 1    RIGVEYTKRPKFQVAIVPSNHMSTAVVEPYNSLLSLNASTEHAEICNMTDNEAVYQLLTS 180
            R+ V+Y K+ K + A+ P+  +STAVVEPYNS+L+ + + EH++   M DNEA+Y +   
Sbjct: 150  RLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 209

Query: 181  TLDISRPTYNNLNRVLAQVFSSLTVSLRYESLLNADFDQIITNLVPYPRIHYPVCNYSPI 360
             LDI RP+Y NLNR++ Q+ SS+T SLR++  LN D  +  TNLVPYPRIH+P+  Y+P+
Sbjct: 210  NLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV 269

Query: 361  VSVRRAEHEQLSTHEITRSIFDDHSQMVSIKMSDGKYMACCLQYRGNVAPKDVNQAVFEI 540
            +S  +A HEQLS  +IT + F+  +QMV      GKYMACCL YRG+V PKDVN A+  I
Sbjct: 270  ISAEKAYHEQLSVADITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIAAI 329

Query: 541  KRRTDVKFVEWCPTGFKLGINCQPPTAVPGSELAQTLRSVTMLSNTTAVSQIWATIGRKF 720
            K +  ++FV+WCPTGFK+GIN QPPT VPG +LA+  R+V MLSNTTA+++ WA +  KF
Sbjct: 330  KTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 389

Query: 721  DVLFSKRSFVHWYVGEGMEEGEFNEAKDEMTSLVQDYEEIAADEGGNDIEASKE 882
            D++++KR+FVHWYVGEGMEEGEF+EA+++M +L +DYEE+  D  G + E  +E
Sbjct: 390  DLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGTDSVGEEDEEGEE 443

>sp|P68373|TBA6_MOUSE Tubulin alpha-6 chain (Alpha-tubulin 6) (Alpha-tubulin isotype
            M-alpha-6)
 sp|P68365|TBA3_CRIGR Tubulin alpha-3 chain (Alpha-tubulin 3) (Alpha-tubulin III)
          Length = 449

 Score =  351 bits (900), Expect = 3e-96
 Identities = 157/293 (53%), Positives = 217/293 (74%)
 Frame = +1

Query: 1    RIGVEYTKRPKFQVAIVPSNHMSTAVVEPYNSLLSLNASTEHAEICNMTDNEAVYQLLTS 180
            R+ V+Y K+ K + +I P+  +STAVVEPYNS+L+ + + EH++   M DNEA+Y +   
Sbjct: 156  RLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 215

Query: 181  TLDISRPTYNNLNRVLAQVFSSLTVSLRYESLLNADFDQIITNLVPYPRIHYPVCNYSPI 360
             LDI RPTY NLNR+++Q+ SS+T SLR++  LN D  +  TNLVPYPRIH+P+  Y+P+
Sbjct: 216  NLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV 275

Query: 361  VSVRRAEHEQLSTHEITRSIFDDHSQMVSIKMSDGKYMACCLQYRGNVAPKDVNQAVFEI 540
            +S  +A HEQL+  EIT + F+  +QMV      GKYMACCL YRG+V PKDVN A+  I
Sbjct: 276  ISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATI 335

Query: 541  KRRTDVKFVEWCPTGFKLGINCQPPTAVPGSELAQTLRSVTMLSNTTAVSQIWATIGRKF 720
            K +  ++FV+WCPTGFK+GIN QPPT VPG +LA+  R+V MLSNTTA+++ WA +  KF
Sbjct: 336  KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 395

Query: 721  DVLFSKRSFVHWYVGEGMEEGEFNEAKDEMTSLVQDYEEIAADEGGNDIEASK 879
            D++++KR+FVHWYVGEGMEEGEF+EA+++M +L +DYEE+ AD    D E  +
Sbjct: 396  DLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGADSAEGDDEGEE 448

>sp|Q6AYZ1|TBA6_RAT Tubulin alpha-6 chain (Alpha-tubulin 6)
          Length = 449

 Score =  351 bits (900), Expect = 3e-96
 Identities = 157/293 (53%), Positives = 217/293 (74%)
 Frame = +1

Query: 1    RIGVEYTKRPKFQVAIVPSNHMSTAVVEPYNSLLSLNASTEHAEICNMTDNEAVYQLLTS 180
            R+ V+Y K+ K + +I P+  +STAVVEPYNS+L+ + + EH++   M DNEA+Y +   
Sbjct: 156  RLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 215

Query: 181  TLDISRPTYNNLNRVLAQVFSSLTVSLRYESLLNADFDQIITNLVPYPRIHYPVCNYSPI 360
             LDI RPTY NLNR+++Q+ SS+T SLR++  LN D  +  TNLVPYPRIH+P+  Y+P+
Sbjct: 216  NLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV 275

Query: 361  VSVRRAEHEQLSTHEITRSIFDDHSQMVSIKMSDGKYMACCLQYRGNVAPKDVNQAVFEI 540
            +S  +A HEQL+  EIT + F+  +QMV      GKYMACCL YRG+V PKDVN A+  I
Sbjct: 276  ISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATI 335

Query: 541  KRRTDVKFVEWCPTGFKLGINCQPPTAVPGSELAQTLRSVTMLSNTTAVSQIWATIGRKF 720
            K +  ++FV+WCPTGFK+GIN QPPT VPG +LA+  R+V MLSNTTA+++ WA +  KF
Sbjct: 336  KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLARVQRAVCMLSNTTAIAEAWARLDHKF 395

Query: 721  DVLFSKRSFVHWYVGEGMEEGEFNEAKDEMTSLVQDYEEIAADEGGNDIEASK 879
            D++++KR+FVHWYVGEGMEEGEF+EA+++M +L +DYEE+ AD    D E  +
Sbjct: 396  DLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGADSAEGDDEGEE 448

>sp|Q9BQE3|TBA6_HUMAN Tubulin alpha-6 chain (Alpha-tubulin 6)
          Length = 449

 Score =  350 bits (898), Expect = 4e-96
 Identities = 157/293 (53%), Positives = 217/293 (74%)
 Frame = +1

Query: 1    RIGVEYTKRPKFQVAIVPSNHMSTAVVEPYNSLLSLNASTEHAEICNMTDNEAVYQLLTS 180
            R+ V+Y K+ K + +I P+  +STAVVEPYNS+L+ + + EH++   M DNEA+Y +   
Sbjct: 156  RLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 215

Query: 181  TLDISRPTYNNLNRVLAQVFSSLTVSLRYESLLNADFDQIITNLVPYPRIHYPVCNYSPI 360
             LDI RPTY NLNR+++Q+ SS+T SLR++  LN D  +  TNLVPYPRIH+P+  Y+P+
Sbjct: 216  NLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV 275

Query: 361  VSVRRAEHEQLSTHEITRSIFDDHSQMVSIKMSDGKYMACCLQYRGNVAPKDVNQAVFEI 540
            +S  +A HEQL+  EIT + F+  +QMV      GKYMACCL YRG+V PKDVN A+  I
Sbjct: 276  ISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATI 335

Query: 541  KRRTDVKFVEWCPTGFKLGINCQPPTAVPGSELAQTLRSVTMLSNTTAVSQIWATIGRKF 720
            K +  ++FV+WCPTGFK+GIN QPPT VPG +LA+  R+V MLSNTTAV++ WA +  KF
Sbjct: 336  KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKF 395

Query: 721  DVLFSKRSFVHWYVGEGMEEGEFNEAKDEMTSLVQDYEEIAADEGGNDIEASK 879
            D++++KR+FVHWYVGEGMEEGEF+EA+++M +L +DYEE+ AD    + E  +
Sbjct: 396  DLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGADSADGEDEGEE 448

>sp|Q91060|TBA_NOTVI Tubulin alpha chain
          Length = 450

 Score =  350 bits (897), Expect = 6e-96
 Identities = 159/290 (54%), Positives = 217/290 (74%), Gaps = 2/290 (0%)
 Frame = +1

Query: 1    RIGVEYTKRPKFQVAIVPSNHMSTAVVEPYNSLLSLNASTEHAEICNMTDNEAVYQLLTS 180
            R+ V+Y K+ K + AI P+  +STAVVEPYNS+L+ + + EH++   M DNEA+Y +   
Sbjct: 156  RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 215

Query: 181  TLDISRPTYNNLNRVLAQVFSSLTVSLRYESLLNADFDQIITNLVPYPRIHYPVCNYSPI 360
             LDI RP+Y NLNR+++Q+ SS+T SLR++  LN D  +  TNLVPYPRIH+P+  Y+P+
Sbjct: 216  NLDIERPSYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV 275

Query: 361  VSVRRAEHEQLSTHEITRSIFDDHSQMVSIKMSDGKYMACCLQYRGNVAPKDVNQAVFEI 540
            +S  +A HEQLS  EIT + F+  +QMV      GKYMACCL YRG+V PKDVN A+  I
Sbjct: 276  ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAI 335

Query: 541  KRRTDVKFVEWCPTGFKLGINCQPPTAVPGSELAQTLRSVTMLSNTTAVSQIWATIGRKF 720
            K +  ++FV+WCPTGFK+GIN QPPTAVPG +LA+  R+V MLSNTTA+++ WA +  KF
Sbjct: 336  KTKRSIQFVDWCPTGFKVGINYQPPTAVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 395

Query: 721  DVLFSKRSFVHWYVGEGMEEGEFNEAKDEMTSLVQDYEEIAAD--EGGND 864
            D++++KR+FVHWYVGEGMEEGEF+EA+++M +L +DYEE+  D  EG  D
Sbjct: 396  DLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGLDSYEGEED 445

>sp|P08537|TBA_XENLA Tubulin alpha chain
          Length = 449

 Score =  349 bits (896), Expect = 7e-96
 Identities = 156/293 (53%), Positives = 217/293 (74%)
 Frame = +1

Query: 1    RIGVEYTKRPKFQVAIVPSNHMSTAVVEPYNSLLSLNASTEHAEICNMTDNEAVYQLLTS 180
            R+ V+Y K+ K + AI P+  +STAVVEPYNS+L+ + + EH++   M DNEA+Y +   
Sbjct: 156  RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 215

Query: 181  TLDISRPTYNNLNRVLAQVFSSLTVSLRYESLLNADFDQIITNLVPYPRIHYPVCNYSPI 360
             LDI RPTY NLNR+++Q+ SS+T SLR++  LN D  +  TNLVPYPRIH+P+  Y+P+
Sbjct: 216  NLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV 275

Query: 361  VSVRRAEHEQLSTHEITRSIFDDHSQMVSIKMSDGKYMACCLQYRGNVAPKDVNQAVFEI 540
            +S  +A HEQL+  +IT + F+  +QMV      GKYMACCL YRG+V PKDVN A+  I
Sbjct: 276  ISAEKAYHEQLTVADITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATI 335

Query: 541  KRRTDVKFVEWCPTGFKLGINCQPPTAVPGSELAQTLRSVTMLSNTTAVSQIWATIGRKF 720
            K +  ++FV+WCPTGFK+GIN QPPT VPG +LA+  R+V MLSNTTA+++ WA +  KF
Sbjct: 336  KTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 395

Query: 721  DVLFSKRSFVHWYVGEGMEEGEFNEAKDEMTSLVQDYEEIAADEGGNDIEASK 879
            D++++KR+FVHWYVGEGMEEGEF+EA+++M +L +DYEE+ AD    + E  +
Sbjct: 396  DLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGADSADAEDEGEE 448

>sp|P36220|TBA_TORMA Tubulin alpha chain (Alpha T6)
          Length = 451

 Score =  349 bits (895), Expect = 1e-95
 Identities = 158/295 (53%), Positives = 218/295 (73%), Gaps = 2/295 (0%)
 Frame = +1

Query: 1    RIGVEYTKRPKFQVAIVPSNHMSTAVVEPYNSLLSLNASTEHAEICNMTDNEAVYQLLTS 180
            R+ V+Y K+ K + +I P+  +STAVVEPYNS+L+ + + EH++   M DNEA+Y +   
Sbjct: 156  RLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 215

Query: 181  TLDISRPTYNNLNRVLAQVFSSLTVSLRYESLLNADFDQIITNLVPYPRIHYPVCNYSPI 360
             LDI RPTY NLNR+++Q+ SS+T SLR++  LN D  +  TNLVPYPRIH+P+  Y+P+
Sbjct: 216  NLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV 275

Query: 361  VSVRRAEHEQLSTHEITRSIFDDHSQMVSIKMSDGKYMACCLQYRGNVAPKDVNQAVFEI 540
            +S  +A HEQLS  EIT + F+  +QMV      GKYMACCL YRG+V PKDVN A+  I
Sbjct: 276  ISAEKAYHEQLSVSEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATI 335

Query: 541  KRRTDVKFVEWCPTGFKLGINCQPPTAVPGSELAQTLRSVTMLSNTTAVSQIWATIGRKF 720
            K +  ++FV+WCPTGFK+GIN QPPT VPG +LA+  R+V MLSNTTA+++ WA +  KF
Sbjct: 336  KTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 395

Query: 721  DVLFSKRSFVHWYVGEGMEEGEFNEAKDEMTSLVQDYEEIAAD--EGGNDIEASK 879
            D++++KR+FVHWYVGEGMEEGEF+EA+++M +L +DYEE+  D  EG  + E  +
Sbjct: 396  DLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSVEGEGEEEGEE 450

>sp|Q6AY56|TBA8_RAT Tubulin alpha-8 chain (Alpha-tubulin 8)
          Length = 449

 Score =  349 bits (895), Expect = 1e-95
 Identities = 157/283 (55%), Positives = 214/283 (75%)
 Frame = +1

Query: 1    RIGVEYTKRPKFQVAIVPSNHMSTAVVEPYNSLLSLNASTEHAEICNMTDNEAVYQLLTS 180
            R+ ++Y K+ K + AI P+  +STAVVEPYNS+L+ + + EH++   M DNEA+Y +   
Sbjct: 156  RLSLDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 215

Query: 181  TLDISRPTYNNLNRVLAQVFSSLTVSLRYESLLNADFDQIITNLVPYPRIHYPVCNYSPI 360
             LDI RPTY NLNR+++Q+ SS+T SLR++  LN D  +  TNLVPYPRIH+P+  Y+PI
Sbjct: 216  NLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPI 275

Query: 361  VSVRRAEHEQLSTHEITRSIFDDHSQMVSIKMSDGKYMACCLQYRGNVAPKDVNQAVFEI 540
            VS  +A HEQLS  EIT S F+ +SQMV      GKYMACC+ YRG+V PKDVN A+  I
Sbjct: 276  VSAEKAYHEQLSVAEITSSCFEPNSQMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAI 335

Query: 541  KRRTDVKFVEWCPTGFKLGINCQPPTAVPGSELAQTLRSVTMLSNTTAVSQIWATIGRKF 720
            K +  ++FV+WCPTGFK+GIN QPPT VPG +LA+  R+V MLSNTTA+++ WA +  KF
Sbjct: 336  KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 395

Query: 721  DVLFSKRSFVHWYVGEGMEEGEFNEAKDEMTSLVQDYEEIAAD 849
            D++++KR+FVHWYVGEGMEEGEF+EA++++ +L +DYEE+  D
Sbjct: 396  DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGTD 438

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,651,926
Number of Sequences: 369166
Number of extensions: 1865272
Number of successful extensions: 6316
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6022
length of database: 68,354,980
effective HSP length: 112
effective length of database: 47,664,660
effective search space used: 12917122860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00473

  1. Dr_sW_012_J23
  2. Dr_sW_010_N16