Planarian EST Database

DrC_00460

Cluster detail
GO Category : Not Available
Consensus Sequence :
>DrC_00460 GCCGAATTCGGCACGAGGCGAAGGTGAGGGCTGCTACGAATGATGATCCGTGGGGCCCTC ACGGTCAAGATATGCAAGAAATTGCAGAATACACGAAGCATTATGATACGCTGGCTCAGG TGATGGGAATGCTGTGGCGGCGGATGTTCCAAGAGCAGAAATGCAATTGGAGGCGAACAT ACAAGTCGCTATTGTTGTTGTCGTATCTTCTGCGGAACGGGTCGGATAGAATTGTTATGA GCTGCAAAGAACATGTTTATGATTTGCGGCTGTTGGAATCATATCAATACATCGATGAGA CTGGTAAAGATCAAGGTGTCAATAGTAAGTGTTGATGATATTGATGATGAGTGCGCGTGT CTGTCAGTGATAAGGCTGCTGCTCAACAAGTTATTCTCACATGCATTTGTAGCGACATTC CTCATTCATCCAACATCTCACGCAACTGACCTTTGCTCAAGTTCAATCTGATTATCAATA CTGCTATCGATTCAATTCTATATCTCTGTCTCTTTGTCAACCTTTGCTTTCTCCATCTAC GCATTCTAAATTGAACTGGTTTACATCGTGATATTCTTTTCGTTAAATCTTTCACACAAC ATTTTCCATTTCTTATATTTCCTCTGACAATTTCCCTGTTCAAGCTTCATCATATGTTTC CTTGAAACCTTGTAAAATCTGCCCGCCCACCGACACTCATCTATTGCACACATTGATTTA ATTAATTAATCCAGTCAGACACAAGGCCAAGGAAATAACCGCGTTGCTGGAAAATGAATC GCAACTGTCCACTGAGCGCAAGAAATCTGCTATGAATAGAAATAAATATCAAGGCGGTGG CATCAGCAGTTCTGTGAACGGCCATAGATACTGCGATGATGA

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00460
         (882 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q14677|EPN4_HUMAN  Epsin-4 (Epsin-related protein) (Epsin...   128   2e-29
sp|Q99KN9|EPN4_MOUSE  Epsin-4 (Epsin-related protein) (Epsin...   128   2e-29
sp|Q91W69|EPN3_MOUSE  Epsin-3 (EPS-15 interacting protein 3)      101   2e-21
sp|Q9H201|EPN3_HUMAN  Epsin-3 (EPS-15 interacting protein 3)      101   3e-21
sp|Q9Y6I3|EPN1_HUMAN  Epsin-1 (EPS-15 interacting protein 1)...    98   3e-20
sp|O88339|EPN1_RAT  Epsin-1 (EPS-15 interacting protein 1)         98   3e-20
sp|Q80VP1|EPN1_MOUSE  Epsin-1 (EPS-15 interacting protein 1)...    98   3e-20
sp|Q8CHU3|EPN2_MOUSE  Epsin-2 (EPS-15 interacting protein 2)...    97   8e-20
sp|O95208|EPN2_HUMAN  Epsin-2 (EPS-15 interacting protein 2)       97   8e-20
sp|Q9Z1Z3|EPN2_RAT  Epsin-2 (EPS-15 interacting protein 2)         96   1e-19

>sp|Q14677|EPN4_HUMAN Epsin-4 (Epsin-related protein) (EpsinR) (Enthoprotin) (Clathrin
           interacting protein localized in the trans-Golgi region)
           (Clint)
          Length = 625

 Score =  128 bits (322), Expect = 2e-29
 Identities = 58/103 (56%), Positives = 73/103 (70%)
 Frame = +3

Query: 15  EAKVRAATNDDPWGPHGQDMQEIAEYTKHYDTLAQVMGMLWRRMFQEQKCNWRRTYKXXX 194
           E+KVR ATNDDPWGP GQ M EIA+ T  Y+   ++M MLW RM ++ K NWRR YK   
Sbjct: 25  ESKVREATNDDPWGPSGQLMGEIAKATFMYEQFPELMNMLWSRMLKDNKKNWRRVYKSLL 84

Query: 195 XXXXXXRNGSDRIVMSCKEHVYDLRLLESYQYIDETGKDQGVN 323
                 RNGS+R+V S +EH+YDLR LE+Y ++DE GKDQG+N
Sbjct: 85  LLAYLIRNGSERVVTSAREHIYDLRSLENYHFVDEHGKDQGIN 127


 Score = 39.3 bits (90), Expect = 0.015
 Identities = 19/48 (39%), Positives = 29/48 (60%)
 Frame = +2

Query: 734 VRHKAKEITALLENESQLSTERKKSAMNRNKYQGGGISSSVNGHRYCD 877
           +R K KE+    +++ +L  ERKK+  N++KY G   S SV G RY +
Sbjct: 128 IRQKVKELVEFAQDDDRLREERKKAKKNKDKYVGVS-SDSVGGFRYSE 174

>sp|Q99KN9|EPN4_MOUSE Epsin-4 (Epsin-related protein) (EpsinR) (Enthoprotin)
          Length = 631

 Score =  128 bits (322), Expect = 2e-29
 Identities = 58/103 (56%), Positives = 73/103 (70%)
 Frame = +3

Query: 15  EAKVRAATNDDPWGPHGQDMQEIAEYTKHYDTLAQVMGMLWRRMFQEQKCNWRRTYKXXX 194
           E+KVR ATNDDPWGP GQ M EIA+ T  Y+   ++M MLW RM ++ K NWRR YK   
Sbjct: 33  ESKVREATNDDPWGPSGQLMGEIAKATFMYEQFPELMNMLWSRMLKDNKKNWRRVYKSLL 92

Query: 195 XXXXXXRNGSDRIVMSCKEHVYDLRLLESYQYIDETGKDQGVN 323
                 RNGS+R+V S +EH+YDLR LE+Y ++DE GKDQG+N
Sbjct: 93  LLAYLIRNGSERVVTSAREHIYDLRSLENYHFVDEHGKDQGIN 135


 Score = 38.9 bits (89), Expect = 0.019
 Identities = 19/46 (41%), Positives = 28/46 (60%)
 Frame = +2

Query: 734 VRHKAKEITALLENESQLSTERKKSAMNRNKYQGGGISSSVNGHRY 871
           +R K KE+    +++ +L  ERKK+  N++KY G   S SV G RY
Sbjct: 136 IRQKVKELVEFAQDDDRLREERKKAKKNKDKYVGVS-SDSVGGFRY 180

>sp|Q91W69|EPN3_MOUSE Epsin-3 (EPS-15 interacting protein 3)
          Length = 636

 Score =  101 bits (252), Expect = 2e-21
 Identities = 48/103 (46%), Positives = 65/103 (63%)
 Frame = +3

Query: 15  EAKVRAATNDDPWGPHGQDMQEIAEYTKHYDTLAQVMGMLWRRMFQEQKCNWRRTYKXXX 194
           E KVR AT++DPWGP    M EIA+ T +    A+VMGM+WRR+    K NWR  YK   
Sbjct: 21  EIKVREATSNDPWGPPSSLMSEIADLTFNTVAFAEVMGMVWRRLNDSGK-NWRHVYKALT 79

Query: 195 XXXXXXRNGSDRIVMSCKEHVYDLRLLESYQYIDETGKDQGVN 323
                 + GS+R+   C+E++Y ++ L+ +QYID  GKDQGVN
Sbjct: 80  LLDYLLKTGSERVAHQCRENLYTIQTLKDFQYIDRDGKDQGVN 122

>sp|Q9H201|EPN3_HUMAN Epsin-3 (EPS-15 interacting protein 3)
          Length = 632

 Score =  101 bits (251), Expect = 3e-21
 Identities = 48/103 (46%), Positives = 64/103 (62%)
 Frame = +3

Query: 15  EAKVRAATNDDPWGPHGQDMQEIAEYTKHYDTLAQVMGMLWRRMFQEQKCNWRRTYKXXX 194
           E KVR AT++DPWGP    M EIA+ T +     +VMGMLWRR+    K NWR  YK   
Sbjct: 21  EIKVREATSNDPWGPPSSLMSEIADLTFNTVAFTEVMGMLWRRLNDSGK-NWRHVYKALT 79

Query: 195 XXXXXXRNGSDRIVMSCKEHVYDLRLLESYQYIDETGKDQGVN 323
                 + GS+R+   C+E++Y ++ L+ +QYID  GKDQGVN
Sbjct: 80  LLDYLLKTGSERVAHQCRENLYTIQTLKDFQYIDRDGKDQGVN 122

>sp|Q9Y6I3|EPN1_HUMAN Epsin-1 (EPS-15 interacting protein 1) (EH domain-binding mitotic
           phosphoprotein)
          Length = 551

 Score = 98.2 bits (243), Expect = 3e-20
 Identities = 44/103 (42%), Positives = 64/103 (62%)
 Frame = +3

Query: 15  EAKVRAATNDDPWGPHGQDMQEIAEYTKHYDTLAQVMGMLWRRMFQEQKCNWRRTYKXXX 194
           E KVR AT++DPWGP    M EIA+ T +    +++M M+W+R+    K NWR  YK   
Sbjct: 21  EIKVREATSNDPWGPSSSLMSEIADLTYNVVAFSEIMSMIWKRLNDHGK-NWRHVYKAMT 79

Query: 195 XXXXXXRNGSDRIVMSCKEHVYDLRLLESYQYIDETGKDQGVN 323
                 + GS+R+   CKE++Y ++ L+ +QY+D  GKDQGVN
Sbjct: 80  LMEYLIKTGSERVSQQCKENMYAVQTLKDFQYVDRDGKDQGVN 122

>sp|O88339|EPN1_RAT Epsin-1 (EPS-15 interacting protein 1)
          Length = 575

 Score = 98.2 bits (243), Expect = 3e-20
 Identities = 44/103 (42%), Positives = 64/103 (62%)
 Frame = +3

Query: 15  EAKVRAATNDDPWGPHGQDMQEIAEYTKHYDTLAQVMGMLWRRMFQEQKCNWRRTYKXXX 194
           E KVR AT++DPWGP    M EIA+ T +    +++M M+W+R+    K NWR  YK   
Sbjct: 21  EIKVREATSNDPWGPSSSLMSEIADLTYNVVAFSEIMSMIWKRLNDHGK-NWRHVYKAMT 79

Query: 195 XXXXXXRNGSDRIVMSCKEHVYDLRLLESYQYIDETGKDQGVN 323
                 + GS+R+   CKE++Y ++ L+ +QY+D  GKDQGVN
Sbjct: 80  LMEYLIKTGSERVSQQCKENMYAVQTLKDFQYVDRDGKDQGVN 122

>sp|Q80VP1|EPN1_MOUSE Epsin-1 (EPS-15 interacting protein 1) (Intersectin-EH binding
           protein 1) (Ibp1)
          Length = 566

 Score = 98.2 bits (243), Expect = 3e-20
 Identities = 44/103 (42%), Positives = 64/103 (62%)
 Frame = +3

Query: 15  EAKVRAATNDDPWGPHGQDMQEIAEYTKHYDTLAQVMGMLWRRMFQEQKCNWRRTYKXXX 194
           E KVR AT++DPWGP    M EIA+ T +    +++M M+W+R+    K NWR  YK   
Sbjct: 12  EIKVREATSNDPWGPSSSLMSEIADLTYNVVAFSEIMSMIWKRLNDHGK-NWRHVYKAMT 70

Query: 195 XXXXXXRNGSDRIVMSCKEHVYDLRLLESYQYIDETGKDQGVN 323
                 + GS+R+   CKE++Y ++ L+ +QY+D  GKDQGVN
Sbjct: 71  LMEYLIKTGSERVSQQCKENMYAVQTLKDFQYVDRDGKDQGVN 113

>sp|Q8CHU3|EPN2_MOUSE Epsin-2 (EPS-15 interacting protein 2) (Intersectin-EH binding
           protein 2) (Ibp2)
          Length = 595

 Score = 96.7 bits (239), Expect = 8e-20
 Identities = 42/103 (40%), Positives = 64/103 (62%)
 Frame = +3

Query: 15  EAKVRAATNDDPWGPHGQDMQEIAEYTKHYDTLAQVMGMLWRRMFQEQKCNWRRTYKXXX 194
           E KVR AT++DPWGP    M EIA+ T +    +++M M+W+R+    K NWR  YK   
Sbjct: 21  EIKVREATSNDPWGPSSSLMTEIADLTYNVVAFSEIMSMVWKRLNDHGK-NWRHVYKALT 79

Query: 195 XXXXXXRNGSDRIVMSCKEHVYDLRLLESYQYIDETGKDQGVN 323
                 + GS+R+   C+E+++ ++ L+ +QYID  GKDQG+N
Sbjct: 80  LLDYLIKTGSERVAQQCRENIFAIQTLKDFQYIDRDGKDQGIN 122

>sp|O95208|EPN2_HUMAN Epsin-2 (EPS-15 interacting protein 2)
          Length = 642

 Score = 96.7 bits (239), Expect = 8e-20
 Identities = 42/103 (40%), Positives = 64/103 (62%)
 Frame = +3

Query: 15  EAKVRAATNDDPWGPHGQDMQEIAEYTKHYDTLAQVMGMLWRRMFQEQKCNWRRTYKXXX 194
           E KVR AT++DPWGP    M EIA+ T +    +++M M+W+R+    K NWR  YK   
Sbjct: 21  EIKVREATSNDPWGPSSSLMTEIADLTYNVVAFSEIMSMVWKRLNDHGK-NWRHVYKALT 79

Query: 195 XXXXXXRNGSDRIVMSCKEHVYDLRLLESYQYIDETGKDQGVN 323
                 + GS+R+   C+E+++ ++ L+ +QYID  GKDQG+N
Sbjct: 80  LLDYLIKTGSERVAQQCRENIFAIQTLKDFQYIDRDGKDQGIN 122

>sp|Q9Z1Z3|EPN2_RAT Epsin-2 (EPS-15 interacting protein 2)
          Length = 583

 Score = 96.3 bits (238), Expect = 1e-19
 Identities = 42/103 (40%), Positives = 64/103 (62%)
 Frame = +3

Query: 15  EAKVRAATNDDPWGPHGQDMQEIAEYTKHYDTLAQVMGMLWRRMFQEQKCNWRRTYKXXX 194
           E KVR AT++DPWGP    M EIA+ T +    +++M M+W+R+    K NWR  YK   
Sbjct: 21  EIKVREATSNDPWGPSSSLMTEIADLTYNVVRFSEIMSMVWKRLNDHGK-NWRHVYKALT 79

Query: 195 XXXXXXRNGSDRIVMSCKEHVYDLRLLESYQYIDETGKDQGVN 323
                 + GS+R+   C+E+++ ++ L+ +QYID  GKDQG+N
Sbjct: 80  LLDYLIKTGSERVAQQCRENIFAIQTLKDFQYIDRDGKDQGIN 122

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,569,062
Number of Sequences: 369166
Number of extensions: 1891638
Number of successful extensions: 4114
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4104
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8790245790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00460

Planaria EST Database

DrC_00460

BLASTX 2.2.13 [Nov-27-2005]

Cluster detail