Planaria EST Database

DrC_00458

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00458
         (966 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9GZT4|SRR_HUMAN  Serine racemase                              167   4e-41
sp|Q9QZX7|SRR_MOUSE  Serine racemase                              165   2e-40
sp|P36007|YKV8_YEAST  Hypothetical 34.9 kDa protein in COS9-...   153   8e-37
sp|O59791|YCNE_SCHPO  Hypothetical protein C320.14 in chromo...   147   6e-35
sp|O42615|THDH_ARXAD  Threonine dehydratase, mitochondrial p...   123   9e-28
sp|P11954|THD2_SALTY  Threonine dehydratase catabolic (Threo...   115   2e-25
sp|P00927|THDH_YEAST  Threonine dehydratase, mitochondrial p...   113   7e-25
sp|P05792|THD2_ECOLI  Threonine dehydratase catabolic (Threo...   112   1e-24
sp|P46493|THD1_HAEIN  Threonine dehydratase biosynthetic (Th...   109   1e-23
sp|P55664|Y4TJ_RHISN  Putative threonine dehydratase (Threon...   103   9e-22

>sp|Q9GZT4|SRR_HUMAN Serine racemase
          Length = 340

 Score =  167 bits (423), Expect = 4e-41
 Identities = 102/275 (37%), Positives = 152/275 (55%), Gaps = 3/275 (1%)
 Frame = +1

Query: 10  IDDAVKRISNFIHETPVMQSNVINTLVNRNVFFKCEHLQKTGSFKLRGAANNILCKLE-- 183
           ++ A   I + IH TPV+ S+++N L  RN+FFKCE  QKTGSFK+RGA N +   +   
Sbjct: 12  VEKAHINIRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRSLVPDA 71

Query: 184 -KQNINGVVTHSSGNHGQATAYAAKLLNIPAIIVVPKSTPQIKCEAITFYGAKIVFSEDT 360
            ++    VVTHSSGNHGQA  YAAKL  IPA IVVP++ P  K  AI  YGA IV+ E +
Sbjct: 72  LERKPKAVVTHSSGNHGQALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCEPS 131

Query: 361 PQSREELCSKMAKENXXXXXXXXXXXXXXNGQGTLGMEFLKQIPNLDAVLISISXXXXXX 540
            +SRE +  ++ +E                GQGT+ +E L Q+P +DA+++ +       
Sbjct: 132 DESRENVAKRVTEETEGIMVHPNQEPAVIAGQGTIALEVLNQVPLVDALVVPVGGGGMLA 191

Query: 541 XXXXXXKNLNPKIRVYCVEPFGKELEESLRSGSRLWKGEQKCLDTVAEGLKVHHPGQLTF 720
                 K L P ++VY  EP   +     +   +L        +T+A+G+K    G  T+
Sbjct: 192 GIAITVKALKPSVKVYAAEPSNADDCYQSKLKGKLMPNLYP-PETIADGVK-SSIGLNTW 249

Query: 721 PILCDLAERNIFSVTNSEMIEGVKMSMKYLKQVIE 825
           PI+ DL + +IF+VT  E+    ++  + +K +IE
Sbjct: 250 PIIRDLVD-DIFTVTEDEIKCATQLVWERMKLLIE 283

>sp|Q9QZX7|SRR_MOUSE Serine racemase
          Length = 339

 Score =  165 bits (417), Expect = 2e-40
 Identities = 103/279 (36%), Positives = 155/279 (55%), Gaps = 7/279 (2%)
 Frame = +1

Query: 10  IDDAVKRISNFIHETPVMQSNVINTLVNRNVFFKCEHLQKTGSFKLRGAANNI---LCKL 180
           ++ A   I + IH TPV+ S+++N +  RN+FFKCE  QKTGSFK+RGA N I   +   
Sbjct: 12  VEKAHINIQDSIHLTPVLTSSILNQIAGRNLFFKCELFQKTGSFKIRGALNAIRGLIPDT 71

Query: 181 EKQNINGVVTHSSGNHGQATAYAAKLLNIPAIIVVPKSTPQIKCEAITFYGAKIVFSEDT 360
            ++    VVTHSSGNHGQA  YAAKL  IPA IVVP++ P  K  AI  YGA IV+ + +
Sbjct: 72  PEEKPKAVVTHSSGNHGQALTYAAKLEGIPAYIVVPQTAPNCKKLAIQAYGASIVYCDPS 131

Query: 361 PQSREELCSKMAKENXXXXXXXXXXXXXXNGQGTLGMEFLKQIPNLDAVLISISXXXXXX 540
            +SRE++  ++ +E                GQGT+ +E L Q+P +DA+++ +       
Sbjct: 132 DESREKVTQRIMQETEGILVHPNQEPAVIAGQGTIALEVLNQVPLVDALVVPVGGGGMVA 191

Query: 541 XXXXXXKNLNPKIRVYCVEPFGKELEESLRSGSRLWKGE----QKCLDTVAEGLKVHHPG 708
                 K L P ++VY  EP     ++  +S     KGE        +T+A+G+K    G
Sbjct: 192 GIAITIKALKPSVKVYAAEP--SNADDCYQS---KLKGELTPNLHPPETIADGVK-SSIG 245

Query: 709 QLTFPILCDLAERNIFSVTNSEMIEGVKMSMKYLKQVIE 825
             T+PI+ DL + ++F+VT  E+    ++    +K +IE
Sbjct: 246 LNTWPIIRDLVD-DVFTVTEDEIKYATQLVWGRMKLLIE 283

>sp|P36007|YKV8_YEAST Hypothetical 34.9 kDa protein in COS9-JEN1 intergenic region
          Length = 326

 Score =  153 bits (386), Expect = 8e-37
 Identities = 86/271 (31%), Positives = 150/271 (55%), Gaps = 1/271 (0%)
 Frame = +1

Query: 16  DAVKRISNFIHETPVMQSNVINTLVNRNVFFKCEHLQKTGSFKLRGAANNILCKLEKQNI 195
           DA  RI  ++++TPV+ S ++N  +   ++FK E+ Q+ G+FK RGA N +    +++  
Sbjct: 11  DASNRIKEYVNKTPVLTSRMLNDRLGAQIYFKGENFQRVGAFKFRGAMNAVSKLSDEKRS 70

Query: 196 NGVVTHSSGNHGQATAYAAKLLNIPAIIVVPKSTPQIKCEAITFYGAKIVFSEDTPQSRE 375
            GV+  SSGNH QA A +AKLLN+PA IV+P+  P +K  A   YGA I+      + RE
Sbjct: 71  KGVIAFSSGNHAQAIALSAKLLNVPATIVMPEDAPALKVAATAGYGAHIIRYNRYTEDRE 130

Query: 376 ELCSKMAKENXXXXXXXXXXXXXXNGQGTLGMEFLKQIPNLDAVLISISXXXXXXXXXXX 555
           ++  ++A E+               GQGT   E L+++  LDA+ + +            
Sbjct: 131 QIGRQLAAEHGFALIPPYDHPDVIAGQGTSAKELLEEVGQLDALFVPLGGGGLLSGSALA 190

Query: 556 XKNLNPKIRVYCVEP-FGKELEESLRSGSRLWKGEQKCLDTVAEGLKVHHPGQLTFPILC 732
            ++L+P  +++ VEP  G + ++S RSGS +     K   T+A+G +  H G+ TF I+ 
Sbjct: 191 ARSLSPGCKIFGVEPEAGNDGQQSFRSGSIVHINTPK---TIADGAQTQHLGEYTFAIIR 247

Query: 733 DLAERNIFSVTNSEMIEGVKMSMKYLKQVIE 825
           +  + +I +V++ E+++ +    + +K V+E
Sbjct: 248 ENVD-DILTVSDQELVKCMHFLAERMKVVVE 277

>sp|O59791|YCNE_SCHPO Hypothetical protein C320.14 in chromosome III
          Length = 323

 Score =  147 bits (370), Expect = 6e-35
 Identities = 88/273 (32%), Positives = 141/273 (51%), Gaps = 1/273 (0%)
 Frame = +1

Query: 10  IDDAVKRISNFIHETPVMQSNVINTLVNRNVFFKCEHLQKTGSFKLRGAANNILCKLEKQ 189
           +  A +RI  F ++TPV+ S+ +N      VFFKCE+ QK G+FK RGA N +    E Q
Sbjct: 13  VASASERIKKFANKTPVLTSSTVNKEFVAEVFFKCENFQKMGAFKFRGALNALSQLNEAQ 72

Query: 190 NINGVVTHSSGNHGQATAYAAKLLNIPAIIVVPKSTPQIKCEAITFYGAKIVFSEDTPQS 369
              GV+T SSGNH QA A +AK+L IPA I++P   P+ K  A   YG +++  +     
Sbjct: 73  RKAGVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMYDRYKDD 132

Query: 370 REELCSKMAKENXXXXXXXXXXXXXXNGQGTLGMEFLKQIPNLDAVLISISXXXXXXXXX 549
           RE++  ++++                 GQGT   E  +++  LDA+ + +          
Sbjct: 133 REKMAKEISEREGLTIIPPYDHPHVLAGQGTAAKELFEEVGPLDALFVCLGGGGLLSGSA 192

Query: 550 XXXKNLNPKIRVYCVEP-FGKELEESLRSGSRLWKGEQKCLDTVAEGLKVHHPGQLTFPI 726
              ++  P   VY VEP  G + ++S R GS +     K   T+A+G +  H G  TF I
Sbjct: 193 LAARHFAPNCEVYGVEPEAGNDGQQSFRKGSIVHIDTPK---TIADGAQTQHLGNYTFSI 249

Query: 727 LCDLAERNIFSVTNSEMIEGVKMSMKYLKQVIE 825
           + +  + +I +V++ E+I+ +K     +K V+E
Sbjct: 250 IKEKVD-DILTVSDEELIDCLKFYAARMKIVVE 281

>sp|O42615|THDH_ARXAD Threonine dehydratase, mitochondrial precursor (Threonine
           deaminase)
          Length = 550

 Score =  123 bits (308), Expect = 9e-28
 Identities = 84/287 (29%), Positives = 140/287 (48%), Gaps = 3/287 (1%)
 Frame = +1

Query: 28  RISNFIHETPVMQSNVINTLVNRNVFFKCEHLQKTGSFKLRGAANNILCKLEKQNINGVV 207
           ++ +  +ETPV  +  +++ +  N+F K E LQ   SFKLRGA N +    ++    GV+
Sbjct: 48  KVYDVCNETPVTPAVNLSSKLGANIFLKREDLQPVFSFKLRGAYNMMAHLPQETRWKGVI 107

Query: 208 THSSGNHGQATAYAAKLLNIPAIIVVPKSTPQIKCEAITFYGAKIVFSEDTPQSREELCS 387
             S+GNH Q  AY+AK LNIPA IV+P  TP IK + +   GAK+V   +   + +  C+
Sbjct: 108 ACSAGNHAQGVAYSAKHLNIPATIVMPVVTPAIKYKNVDRLGAKVVLHGNDFDAAKAECN 167

Query: 388 KMAKENXXXXXXXXXXXXXXNGQGTLGMEFLKQI--PNLDAVLISISXXXXXXXXXXXXK 561
           ++++++               GQGT+G+E L+QI   +L A+ + I             K
Sbjct: 168 RLSEKHGLTNIPLFDNPYVIAGQGTIGVELLRQIDVESLKAIFVCIGGGGLIAGVGAYIK 227

Query: 562 NLNPKIRVYCVEPF-GKELEESLRSGSRLWKGEQKCLDTVAEGLKVHHPGQLTFPILCDL 738
            + P++++  VE +    + +SL+ G R+   E   +   A+G  V   G+ TF  LC  
Sbjct: 228 RIAPQVKIIGVETYDANAMRQSLQKGERITLSE---VGLFADGAAVKILGEETFR-LCQQ 283

Query: 739 AERNIFSVTNSEMIEGVKMSMKYLKQVIEHXXXXXXXXLFKYNKDIP 879
               I  V+  E+   +K      + ++E         L KY +  P
Sbjct: 284 VVDEIVLVSTDEICAAIKDVFTETRSIVEPAGALSVAGLVKYVESHP 330

>sp|P11954|THD2_SALTY Threonine dehydratase catabolic (Threonine deaminase)
          Length = 329

 Score =  115 bits (288), Expect = 2e-25
 Identities = 74/262 (28%), Positives = 127/262 (48%), Gaps = 3/262 (1%)
 Frame = +1

Query: 1   LSHIDDAVKRISNFIHETPVMQSNVINTLVNRNVFFKCEHLQKTGSFKLRGAANNILCKL 180
           +  I +A KR++  I++T + +SN  +      +F K E++Q+TGSFK+RGA N +    
Sbjct: 11  IEDILEAKKRLAGKIYKTGMPRSNYFSERCKGEIFLKFENMQRTGSFKIRGAFNKLSSLT 70

Query: 181 EKQNINGVVTHSSGNHGQATAYAAKLLNIPAIIVVPKSTPQIKCEAITFYGAKIVFSEDT 360
           E +   GVV  S+GNH Q  + +  +L I   +V+PK  P+ K  A   Y A++V   D 
Sbjct: 71  EAEKRKGVVACSAGNHAQGVSLSCAMLGIDGKVVMPKGAPKSKVAATCDYSAEVVLHGDN 130

Query: 361 PQSREELCSKMAKENXXXXXXXXXXXXXXNGQGTLGMEFLKQIPNLDAVLISISXXXXXX 540
                   S++ +                 GQGT+G+E ++ + ++D V++ I       
Sbjct: 131 FNDTIAKVSEIVETEGRIFIPPYDDPKVIAGQGTIGLEIMEDLYDVDNVIVPIGGGGLIA 190

Query: 541 XXXXXXKNLNPKIRVYCVEPFGKELEESLRSGSRLWKGE---QKCLDTVAEGLKVHHPGQ 711
                 K++NP I+V      G + E      +  + GE    +   T+A+G  V  PG 
Sbjct: 191 GIAIAIKSINPTIKV-----IGVQAENVHGMAASYYTGEITTHRTTGTLADGCDVSRPGN 245

Query: 712 LTFPILCDLAERNIFSVTNSEM 777
           LT+ I+ +L + +I  V+  E+
Sbjct: 246 LTYEIVRELVD-DIVLVSEDEI 266

>sp|P00927|THDH_YEAST Threonine dehydratase, mitochondrial precursor (Threonine
           deaminase)
          Length = 576

 Score =  113 bits (283), Expect = 7e-25
 Identities = 83/283 (29%), Positives = 134/283 (47%), Gaps = 5/283 (1%)
 Frame = +1

Query: 31  ISNFIHETPVMQSNVINTLVNRNVFFKCEHLQKTGSFKLRGAANNILCKLEKQNINGVVT 210
           + + I+E+P+ Q   +++ +N NV  K E L    SFKLRGA N I    + Q   GV+ 
Sbjct: 72  VYDVINESPISQGVGLSSRLNTNVILKREDLLPVFSFKLRGAYNMIAKLDDSQRNQGVIA 131

Query: 211 HSSGNHGQATAYAAKLLNIPAIIVVPKSTPQIKCEAITFYGAKIV-FSEDTPQSREELCS 387
            S+GNH Q  A+AAK L IPA IV+P  TP IK + ++  G+++V +  D  +++ E C+
Sbjct: 132 CSAGNHAQGVAFAAKHLKIPATIVMPVCTPSIKYQNVSRLGSQVVLYGNDFDEAKAE-CA 190

Query: 388 KMAKENXXXXXXXXXXXXXXNGQGTLGMEFLKQI---PNLDAVLISISXXXXXXXXXXXX 558
           K+A+E                GQGT+ ME L+Q+     + AV + +             
Sbjct: 191 KLAEERGLTNIPPFDHPYVIAGQGTVAMEILRQVRTANKIGAVFVPVGGGGLIAGIGAYL 250

Query: 559 KNLNPKIRVYCVEPF-GKELEESLRSGSRLWKGEQKCLDTVAEGLKVHHPGQLTFPILCD 735
           K + P I++  VE +    L  SL+   R        + T A+G  V   G+ TF +   
Sbjct: 251 KRVAPHIKIIGVETYDAATLHNSLQRNQRT---PLPVVGTFADGTSVRMIGEETFRVAQQ 307

Query: 736 LAERNIFSVTNSEMIEGVKMSMKYLKQVIEHXXXXXXXXLFKY 864
           + +  +  V   E+   VK   +  + ++E         + KY
Sbjct: 308 VVD-EVVLVNTDEICAAVKDIFEDTRSIVEPSGALSVAGMKKY 349

>sp|P05792|THD2_ECOLI Threonine dehydratase catabolic (Threonine deaminase)
          Length = 329

 Score =  112 bits (281), Expect = 1e-24
 Identities = 73/262 (27%), Positives = 126/262 (48%), Gaps = 3/262 (1%)
 Frame = +1

Query: 1   LSHIDDAVKRISNFIHETPVMQSNVINTLVNRNVFFKCEHLQKTGSFKLRGAANNILCKL 180
           +  I +A +R++  I++T + +SN  +      +F K E++Q+TGSFK+RGA N +    
Sbjct: 11  IDDIIEAKQRLAGRIYKTGMPRSNYFSERCKGEIFLKFENMQRTGSFKIRGAFNKLSSLT 70

Query: 181 EKQNINGVVTHSSGNHGQATAYAAKLLNIPAIIVVPKSTPQIKCEAITFYGAKIVFSEDT 360
           + +   GVV  S+GNH Q  + +  +L I   +V+PK  P+ K  A   Y A++V   D 
Sbjct: 71  DAEKRKGVVACSAGNHAQGVSLSCAMLGIDGKVVMPKGAPKSKVAATCDYSAEVVLHGDN 130

Query: 361 PQSREELCSKMAKENXXXXXXXXXXXXXXNGQGTLGMEFLKQIPNLDAVLISISXXXXXX 540
                   S++ +                 GQGT+G+E ++ + ++D V++ I       
Sbjct: 131 FNDTIAKVSEIVEMEGRIFIPPYDDPKVIAGQGTIGLEIMEDLYDVDNVIVPIGGGGLIA 190

Query: 541 XXXXXXKNLNPKIRVYCVEPFGKELEESLRSGSRLWKGE---QKCLDTVAEGLKVHHPGQ 711
                 K++NP IRV      G + E      +    GE    +   T+A+G  V  PG 
Sbjct: 191 GIAVAIKSINPTIRV-----IGVQSENVHGMAASFHSGEITTHRTTGTLADGCDVSRPGN 245

Query: 712 LTFPILCDLAERNIFSVTNSEM 777
           LT+ I+ +L + +I  V+  E+
Sbjct: 246 LTYEIVRELVD-DIVLVSEDEI 266

>sp|P46493|THD1_HAEIN Threonine dehydratase biosynthetic (Threonine deaminase)
          Length = 513

 Score =  109 bits (273), Expect = 1e-23
 Identities = 82/299 (27%), Positives = 139/299 (46%), Gaps = 7/299 (2%)
 Frame = +1

Query: 16  DAVKRISNFIHE----TPVMQSNVINTLVNRNVFFKCEHLQKTGSFKLRGAANNILCKLE 183
           +A+ ++ + ++E    TP+ +   ++  ++ N++ K E  Q   SFKLRGA   I     
Sbjct: 17  NAIVKLGSRVYEAAQVTPLQKMGKLSERLHNNIWIKREDRQPVNSFKLRGAYAMISSLSA 76

Query: 184 KQNINGVVTHSSGNHGQATAYAAKLLNIPAIIVVPKSTPQIKCEAITFYGAKIVFSEDTP 363
           +Q   GV+  S+GNH Q  A +AK L + A+IV+P++TP IK +A+  +G +++      
Sbjct: 77  EQKAAGVIAASAGNHAQGVALSAKQLGLKALIVMPQNTPSIKVDAVRGFGGEVLLHGANF 136

Query: 364 QSREELCSKMAKENXXXXXXXXXXXXXXNGQGTLGMEFLKQIPNLDAVLISISXXXXXXX 543
              +    +++KE                GQGTL ME L+Q+ +LD V + +        
Sbjct: 137 DEAKAKAIELSKEKNMTFIPPFDHPLVIAGQGTLAMEMLQQVADLDYVFVQVGGGGLAAG 196

Query: 544 XXXXXKNLNPKIRVYCVEPFGKELEESLRSGSRLWKGEQKCLDTV---AEGLKVHHPGQL 714
                K   P+I++      G E ++S    + L KGE   L  +   A+G+ V   G  
Sbjct: 197 VAILLKQFMPEIKI-----IGVESKDSACLKAALDKGEPTDLTHIGLFADGVAVKRIGDE 251

Query: 715 TFPILCDLAERNIFSVTNSEMIEGVKMSMKYLKQVIEHXXXXXXXXLFKYNKDIPLECK 891
           TF  LC     ++  V + E+   +K   + ++ V E         L KY K   +E K
Sbjct: 252 TFR-LCQQYLDDMVLVDSDEVCAAMKDLFENVRAVAEPSGALGLAGLKKYVKQNHIEGK 309

>sp|P55664|Y4TJ_RHISN Putative threonine dehydratase (Threonine deaminase)
          Length = 332

 Score =  103 bits (256), Expect = 9e-22
 Identities = 75/277 (27%), Positives = 125/277 (45%), Gaps = 2/277 (0%)
 Frame = +1

Query: 1   LSHIDDAVKRISNFIHETPVMQSNVINTLVNRNVFFKCEHLQKTGSFKLRGAANNILCKL 180
           L  I+ A +RI   +  TP+  S  +  L    V  K EH Q+TGSFKLRGA N IL   
Sbjct: 9   LESIERARERIEEHVFRTPLTTSRSLTELTGTQVSLKLEHYQRTGSFKLRGATNAILQLS 68

Query: 181 EKQNINGVVTHSSGNHGQATAYAAKLLNIPAIIVVPKSTPQIKCEAITFYGAKIVFSEDT 360
                 GV+  S+GNHG+A +YAAK +   A I +    P+ K   I   GA +     +
Sbjct: 69  PSDRARGVIAASTGNHGRALSYAAKAVGSRATICMSDLVPENKVSEIRKLGATVRIVGSS 128

Query: 361 PQSREELCSKMAKENXXXXXXXXXXXXXXNGQGTLGMEFLKQIPNLDAVLISISXXXXXX 540
               +    ++  E                GQ T+G+E ++ +P++  VL+ +S      
Sbjct: 129 QDDAQVEVERLVAEEGLSMIPPFDHPHIIAGQRTVGLEIVEAMPDVAMVLLPLSGGGLAA 188

Query: 541 XXXXXXKNLNPKIRVYCVE-PFGKELEESLRSGSRLWKGEQKCL-DTVAEGLKVHHPGQL 714
                 K L P  R+  V    G  ++ S+ +G  +   E + L D++  G+ +      
Sbjct: 189 GVAAAVKALRPHARIIGVTMDRGAAMKASIEAGHPVQVKEYRSLADSLGGGIGM--ANAW 246

Query: 715 TFPILCDLAERNIFSVTNSEMIEGVKMSMKYLKQVIE 825
           TF  +C     ++  V   E+  G++ + ++ +Q++E
Sbjct: 247 TFQ-MCRALLDDVVLVNEGEIAAGIRHAYEHERQILE 282

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,317,346
Number of Sequences: 369166
Number of extensions: 1938752
Number of successful extensions: 4931
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4901
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 10048372950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00458

  1. Dr_sW_012_A02
  2. Dr_sW_009_P05