Planaria EST Database

DrC_00379

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00379
         (544 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O60551|NMT2_HUMAN  Glycylpeptide N-tetradecanoyltransfera...   171   8e-43
sp|P30419|NMT1_HUMAN  Glycylpeptide N-tetradecanoyltransfera...   171   1e-42
sp|O61613|NMT_DROME  Glycylpeptide N-tetradecanoyltransferas...   171   1e-42
sp|O70310|NMT1_MOUSE  Glycylpeptide N-tetradecanoyltransfera...   171   1e-42
sp|P31717|NMT1_BOVIN  Glycylpeptide N-tetradecanoyltransfera...   167   2e-41
sp|O70311|NMT2_MOUSE  Glycylpeptide N-tetradecanoyltransfera...   165   8e-41
sp|Q9N181|NMT2_BOVIN  Glycylpeptide N-tetradecanoyltransfera...   162   6e-40
sp|P46548|NMT_CAEEL  Probable glycylpeptide N-tetradecanoylt...   140   2e-33
sp|O43010|NMT_SCHPO  Probable glycylpeptide N-tetradecanoylt...   119   5e-27
sp|P34809|NMT_CRYNV  Glycylpeptide N-tetradecanoyltransferas...   117   1e-26

>sp|O60551|NMT2_HUMAN Glycylpeptide N-tetradecanoyltransferase 2 (Peptide
           N-myristoyltransferase 2) (Myristoyl-CoA:protein
           N-myristoyltransferase 2) (NMT 2) (Type II
           N-myristoyltransferase)
          Length = 498

 Score =  171 bits (434), Expect = 8e-43
 Identities = 87/154 (56%), Positives = 111/154 (72%)
 Frame = +1

Query: 1   DCPQAFKLLNDYLNKFKLRAEFGSLEEFEHWFMPRLNIVSTFVVEQPDGTITDMCSYYSL 180
           D     +L+N YL +F L A     EE  HWF+PR +I+ TFVVE P+G +TD  S+Y+L
Sbjct: 347 DIKSVRELINTYLKQFHL-APVMDEEEVAHWFLpreHIIDTFVVESPNGKLTDFLSFYTL 405

Query: 181 PSSVIDNPHHSKLCAAYSFYNVASEKTGWIPLMRDALIQAKSEGFDVFNALNVMDNKEFL 360
           PS+V+ +P H  L AAYSFYN+ +E T  + LM DALI AKS+GFDVFNAL++M+NK FL
Sbjct: 406 PSTVMHHPAHKSLKAAYSFYNIHTE-TPLLDLMSDALILAKSKGFDVFNALDLMENKTFL 464

Query: 361 KELKFGPGDGQLHYYLYNWQCPQMNSGDVALVLQ 462
           ++LKFG GDG L YYLYNW+CP  +S  V LVLQ
Sbjct: 465 EKLKFGIGDGNLQYYLYNWRCPGTDSEKVGLVLQ 498

>sp|P30419|NMT1_HUMAN Glycylpeptide N-tetradecanoyltransferase 1 (Peptide
           N-myristoyltransferase 1) (Myristoyl-CoA:protein
           N-myristoyltransferase 1) (NMT 1) (Type I
           N-myristoyltransferase)
          Length = 496

 Score =  171 bits (433), Expect = 1e-42
 Identities = 85/154 (55%), Positives = 110/154 (71%)
 Frame = +1

Query: 1   DCPQAFKLLNDYLNKFKLRAEFGSLEEFEHWFMPRLNIVSTFVVEQPDGTITDMCSYYSL 180
           D P   +LL  YL +F L     S EE EHWF P+ NI+ TFVVE  +G +TD  S+Y+L
Sbjct: 345 DIPVVHQLLTRYLKQFHLTPVM-SQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTL 403

Query: 181 PSSVIDNPHHSKLCAAYSFYNVASEKTGWIPLMRDALIQAKSEGFDVFNALNVMDNKEFL 360
           PS+++++P H  L AAYSFYNV ++ T  + LM DAL+ AK +GFDVFNAL++M+NK FL
Sbjct: 404 PSTIMNHPTHKSLKAAYSFYNVHTQ-TPLLDLMSDALVLAKMKGFDVFNALDLMENKTFL 462

Query: 361 KELKFGPGDGQLHYYLYNWQCPQMNSGDVALVLQ 462
           ++LKFG GDG L YYLYNW+CP M +  V LVLQ
Sbjct: 463 EKLKFGIGDGNLQYYLYNWKCPSMGAEKVGLVLQ 496

>sp|O61613|NMT_DROME Glycylpeptide N-tetradecanoyltransferase (Peptide
           N-myristoyltransferase) (Myristoyl-CoA:protein
           N-myristoyltransferase) (NMT) (dNMT)
          Length = 472

 Score =  171 bits (433), Expect = 1e-42
 Identities = 84/153 (54%), Positives = 106/153 (69%)
 Frame = +1

Query: 1   DCPQAFKLLNDYLNKFKLRAEFGSLEEFEHWFMPRLNIVSTFVVEQPDGTITDMCSYYSL 180
           D  +A KLL DYL +F+L   F S EEF HWF P+  I+  FVV    G ITD+ SYY L
Sbjct: 321 DMDKAHKLLEDYLKRFQLSPVF-SKEEFRHWFTPKEGIIDCFVVADEKGNITDLTSYYCL 379

Query: 181 PSSVIDNPHHSKLCAAYSFYNVASEKTGWIPLMRDALIQAKSEGFDVFNALNVMDNKEFL 360
           PSSV+ +P H  + AAYSFYNV S KT W+ LM DALI A++   DV+NAL++M+NK++ 
Sbjct: 380 PSSVMHHPVHKTVRAAYSFYNV-STKTPWLDLMNDALISARNVQMDVYNALDLMENKKYF 438

Query: 361 KELKFGPGDGQLHYYLYNWQCPQMNSGDVALVL 459
             LKFG GDG L YYLYNW+CP M   ++AL+L
Sbjct: 439 APLKFGAGDGNLQYYLYNWRCPSMQPEEIALIL 471

>sp|O70310|NMT1_MOUSE Glycylpeptide N-tetradecanoyltransferase 1 (Peptide
           N-myristoyltransferase 1) (Myristoyl-CoA:protein
           N-myristoyltransferase 1) (NMT 1) (Type I
           N-myristoyltransferase)
          Length = 496

 Score =  171 bits (432), Expect = 1e-42
 Identities = 84/154 (54%), Positives = 110/154 (71%)
 Frame = +1

Query: 1   DCPQAFKLLNDYLNKFKLRAEFGSLEEFEHWFMPRLNIVSTFVVEQPDGTITDMCSYYSL 180
           D P   +LL+ YL +F L       EE EHWF P+ NI+ TFVVE  +G +TD  S+Y+L
Sbjct: 345 DIPVVHQLLSRYLKQFHLTPVMNQ-EEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTL 403

Query: 181 PSSVIDNPHHSKLCAAYSFYNVASEKTGWIPLMRDALIQAKSEGFDVFNALNVMDNKEFL 360
           PS+++++P H  L AAYSFYNV ++ T  + LM DAL+ AK +GFDVFNAL++M+NK FL
Sbjct: 404 PSTIMNHPTHKSLKAAYSFYNVHTQ-TPLLDLMSDALVLAKMKGFDVFNALDLMENKTFL 462

Query: 361 KELKFGPGDGQLHYYLYNWQCPQMNSGDVALVLQ 462
           ++LKFG GDG L YYLYNW+CP M +  V LVLQ
Sbjct: 463 EKLKFGIGDGNLQYYLYNWKCPSMGAEKVGLVLQ 496

>sp|P31717|NMT1_BOVIN Glycylpeptide N-tetradecanoyltransferase 1 (Peptide
           N-myristoyltransferase 1) (Myristoyl-CoA:protein
           N-myristoyltransferase 1) (NMT 1) (Type I
           N-myristoyltransferase)
          Length = 497

 Score =  167 bits (422), Expect = 2e-41
 Identities = 85/155 (54%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
 Frame = +1

Query: 1   DCPQAFKLLNDYLNKFKLRAEFGSLEEFEHWFMPRLNIVSTFVVEQPDGTITDMCSYYSL 180
           D P   +LL+ YL +F L     S EE EHWF P+ NI+ TFVVE  +G +TD  S+Y+L
Sbjct: 345 DIPVVHQLLSRYLKQFHLTPVM-SQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTL 403

Query: 181 PSSVIDNPHHSKLCAAYSFYNVASEKTGWIPLMRDALIQAKSEGFDVFNALNVMDNKEFL 360
           PS+++++P H  L AAYSFYNV ++ T  + LM DAL+ AK +GFDVFNAL++M+NK FL
Sbjct: 404 PSTIMNHPTHKSLKAAYSFYNVHTQ-TPLLDLMSDALVLAKMKGFDVFNALDLMENKTFL 462

Query: 361 KELKFGPGDG-QLHYYLYNWQCPQMNSGDVALVLQ 462
           ++LKFG GDG  L YYLYNW+CP M +  V LVLQ
Sbjct: 463 EKLKFGIGDGNNLQYYLYNWKCPSMGAEKVGLVLQ 497

>sp|O70311|NMT2_MOUSE Glycylpeptide N-tetradecanoyltransferase 2 (Peptide
           N-myristoyltransferase 2) (Myristoyl-CoA:protein
           N-myristoyltransferase 2) (NMT 2) (Type II
           N-myristoyltransferase)
          Length = 529

 Score =  165 bits (417), Expect = 8e-41
 Identities = 83/148 (56%), Positives = 106/148 (71%)
 Frame = +1

Query: 19  KLLNDYLNKFKLRAEFGSLEEFEHWFMPRLNIVSTFVVEQPDGTITDMCSYYSLPSSVID 198
           +L+N YL +F L       E   HWF+PR +I+ TFVVE P G +TD  S+Y+LPS+V+ 
Sbjct: 384 ELINIYLKQFHLAPVMDDAE-VAHWFLpreHIIDTFVVENPSGKLTDFLSFYTLPSTVMH 442

Query: 199 NPHHSKLCAAYSFYNVASEKTGWIPLMRDALIQAKSEGFDVFNALNVMDNKEFLKELKFG 378
           +P H  L AAYSFYN+ +E T  + LM DALI AK +GFDVFNAL++M+NK FL++LKFG
Sbjct: 443 HPAHKSLKAAYSFYNIHTE-TPLLDLMNDALIIAKLKGFDVFNALDLMENKTFLEKLKFG 501

Query: 379 PGDGQLHYYLYNWQCPQMNSGDVALVLQ 462
            GDG L YYLYNW+CP  +S  V LVLQ
Sbjct: 502 IGDGNLQYYLYNWRCPGTDSEKVGLVLQ 529

>sp|Q9N181|NMT2_BOVIN Glycylpeptide N-tetradecanoyltransferase 2 (Peptide
           N-myristoyltransferase 2) (Myristoyl-CoA:protein
           N-myristoyltransferase 2) (NMT 2) (Type II
           N-myristoyltransferase)
          Length = 498

 Score =  162 bits (409), Expect = 6e-40
 Identities = 83/148 (56%), Positives = 105/148 (70%)
 Frame = +1

Query: 19  KLLNDYLNKFKLRAEFGSLEEFEHWFMPRLNIVSTFVVEQPDGTITDMCSYYSLPSSVID 198
           +L N YL +F L A     EE  HWF+P+ +I+ TFVVE   G +TD  S+Y+LPS+V+ 
Sbjct: 353 ELTNTYLKQFHL-APVMDEEEVAHWFLPQEHIIDTFVVENSSGKLTDFLSFYTLPSTVMH 411

Query: 199 NPHHSKLCAAYSFYNVASEKTGWIPLMRDALIQAKSEGFDVFNALNVMDNKEFLKELKFG 378
           +P H  L AAYSFYN+ +E T  + LM DALI AK +GFDVFNAL++M+NK FL++LKFG
Sbjct: 412 HPAHKSLKAAYSFYNIHTE-TPLLDLMSDALIIAKLKGFDVFNALDLMENKTFLEKLKFG 470

Query: 379 PGDGQLHYYLYNWQCPQMNSGDVALVLQ 462
            GDG L YYLYNW+CP   S  V LVLQ
Sbjct: 471 IGDGNLQYYLYNWRCPGTESEKVGLVLQ 498

>sp|P46548|NMT_CAEEL Probable glycylpeptide N-tetradecanoyltransferase (Peptide
           N-myristoyltransferase) (Myristoyl-CoA:protein
           N-myristoyltransferase) (NMT)
          Length = 450

 Score =  140 bits (354), Expect = 2e-33
 Identities = 71/154 (46%), Positives = 95/154 (61%)
 Frame = +1

Query: 1   DCPQAFKLLNDYLNKFKLRAEFGSLEEFEHWFMPRLNIVSTFVVEQPDGTITDMCSYYSL 180
           D PQ FKLL   L ++ L   + S EE  H  +P+  +V ++V E  +G ITD  S+YSL
Sbjct: 298 DVPQVFKLLTTSLKQYSLAPVYNSEEELAHALVPKKGVVYSYVAENQNGKITDFVSFYSL 357

Query: 181 PSSVIDNPHHSKLCAAYSFYNVASEKTGWIPLMRDALIQAKSEGFDVFNALNVMDNKEFL 360
           PS+V+ +  H  + AAY +Y VA   T    L+ D+LI A  E FDVFNAL++M N++  
Sbjct: 358 PSTVMGHTTHKTIYAAYLYYYVAGSVTPK-QLINDSLILANREKFDVFNALDLMHNEKIF 416

Query: 361 KELKFGPGDGQLHYYLYNWQCPQMNSGDVALVLQ 462
            +LKFG GDG L YYLYNW+C  M    + LVLQ
Sbjct: 417 SDLKFGKGDGNLQYYLYNWKCADMKPSQIGLVLQ 450

>sp|O43010|NMT_SCHPO Probable glycylpeptide N-tetradecanoyltransferase (Peptide
           N-myristoyltransferase) (Myristoyl-CoA:protein
           N-myristoyltransferase) (NMT)
          Length = 466

 Score =  119 bits (298), Expect = 5e-27
 Identities = 71/166 (42%), Positives = 101/166 (60%), Gaps = 19/166 (11%)
 Frame = +1

Query: 1   DCPQAFKLLNDYLNKFKLRAEFGSLEEFEHWFMPRLNIVS-----TFVVEQPDGT-ITDM 162
           D P    LL+ Y+ +F+L A   S EE  HWF+    + S     ++VVE P+   ITD 
Sbjct: 282 DVPAVQSLLSQYMERFEL-AHLFSEEEVRHWFLYTDKVSSGPVVWSYVVENPESKKITDF 340

Query: 163 CSYYSLPSSVIDNPHHSKLCAAYSFY--------NVASE-KTGWIP----LMRDALIQAK 303
            S+YSLPS+VI NP +  + AAY +Y        +++SE +  ++     ++ DALI AK
Sbjct: 341 FSFYSLPSTVIGNPKYKDIQAAYLYYYASDSCPKDLSSESQLAFVERCKLIVNDALILAK 400

Query: 304 SEGFDVFNALNVMDNKEFLKELKFGPGDGQLHYYLYNWQCPQMNSG 441
              FDVFNA+ V+DN  FLK+LKFG GDG L+YY+YN+ CP++  G
Sbjct: 401 KFHFDVFNAVTVLDNNLFLKDLKFGEGDGFLNYYIYNYNCPKIPGG 446

>sp|P34809|NMT_CRYNV Glycylpeptide N-tetradecanoyltransferase (Peptide
           N-myristoyltransferase) (Myristoyl-CoA:protein
           N-myristoyltransferase) (NMT)
          Length = 598

 Score =  117 bits (294), Expect = 1e-26
 Identities = 74/196 (37%), Positives = 97/196 (49%), Gaps = 49/196 (25%)
 Frame = +1

Query: 1   DCPQAFKLLNDYLNKFKLRAEFGSLEEFEHWFMPRLN----------IVSTFVVEQPDG- 147
           D PQ   LL  YL++F +   F   +E EHWF+              +V  +VVE P   
Sbjct: 386 DVPQVGALLRRYLDRFDVAQAFKDDDEVEHWFLSGQGKEVGGRRVEQVVWAYVVEDPTTH 445

Query: 148 TITDMCSYYSLPSSVIDNPHHSKLCAAYSFY-------------------------NVAS 252
            ITD+ S+Y+LPS+++ +P H+ L AAY FY                         +VA+
Sbjct: 446 RITDLISFYALPSTIMKHPKHNLLNAAYMFYYATDVIFPPPSSSAHSDADVNAGESSVAA 505

Query: 253 EKTGWIP-------------LMRDALIQAKSEGFDVFNALNVMDNKEFLKELKFGPGDGQ 393
             TG                L  D LI AK  GFDVFNAL ++DN  FL+E KFGPGDG 
Sbjct: 506 VGTGGEDAKTKKKLETRLNALTADLLIIAKQAGFDVFNALTLLDNNMFLQEQKFGPGDGY 565

Query: 394 LHYYLYNWQCPQMNSG 441
           L+YYLYNW C  ++ G
Sbjct: 566 LNYYLYNWNCAPIDGG 581

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,918,889
Number of Sequences: 369166
Number of extensions: 1187631
Number of successful extensions: 2699
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2677
length of database: 68,354,980
effective HSP length: 104
effective length of database: 49,142,540
effective search space used: 3734833040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00379

  1. Dr_sW_010_E08
  2. Dr_sW_028_N23