Planaria EST Database

DrC_00376

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00376
         (587 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P62083|RS7_RAT  40S ribosomal protein S7 (S8) >gi|4906583...   217   2e-56
sp|P50894|RS7_FUGRU  40S ribosomal protein S7                     217   2e-56
sp|P62084|RS7_BRARE  40S ribosomal protein S7                     216   3e-56
sp|Q90YR7|RS7_ICTPU  40S ribosomal protein S7                     216   3e-56
sp|P02362|RS7_XENLA  40S ribosomal protein S7 (S8)                216   4e-56
sp|Q9VA91|RS7_DROME  40S ribosomal protein S7                     211   1e-54
sp|P62085|RS7_DROYA  40S ribosomal protein S7                     209   3e-54
sp|Q9NB21|RS7_CULQU  40S ribosomal protein S7                     205   6e-53
sp|P33514|RS7_ANOGA  40S ribosomal protein S7                     204   1e-52
sp|Q962S0|RS7_SPOFR  40S ribosomal protein S7                     200   2e-51

>sp|P62083|RS7_RAT 40S ribosomal protein S7 (S8)
 sp|P62082|RS7_MOUSE 40S ribosomal protein S7
 sp|P62081|RS7_HUMAN 40S ribosomal protein S7
 sp|Q5RT64|RS7_FELCA 40S ribosomal protein S7
          Length = 194

 Score =  217 bits (552), Expect = 2e-56
 Identities = 111/185 (60%), Positives = 137/185 (74%), Gaps = 1/185 (0%)
 Frame = -2

Query: 586 KYNKEAPTELELQIASFINELQNTNDMKEVLSELMIAGAKECEVSG-KKAIIVYVPINQQ 410
           K N E P E E  I+  + EL+  +D+K  L EL I  AKE EV G +KAII++VP+ Q 
Sbjct: 10  KPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQL 69

Query: 409 KLYQKIHTRFIRELEKKFSGKHVFICAYRTILPKPSRNSKNTLKQKRPISRTLTSVHDNI 230
           K +QKI  R +RELEKKFSGKHV   A R ILPKP+R S+   KQKRP SRTLT+VHD I
Sbjct: 70  KSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAI 129

Query: 229 LSDLVFPAEIIGKRTRISVDGKRLIKCHLEKSQQFNIEHKIETVASLYKQLTGKDVAFEF 50
           L DLVFP+EI+GKR R+ +DG RLIK HL+K+QQ N+EHK+ET + +YK+LTGKDV FEF
Sbjct: 130 LEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEF 189

Query: 49  PEWNL 35
           PE+ L
Sbjct: 190 PEFQL 194

>sp|P50894|RS7_FUGRU 40S ribosomal protein S7
          Length = 194

 Score =  217 bits (552), Expect = 2e-56
 Identities = 111/185 (60%), Positives = 137/185 (74%), Gaps = 1/185 (0%)
 Frame = -2

Query: 586 KYNKEAPTELELQIASFINELQNTNDMKEVLSELMIAGAKECEVSG-KKAIIVYVPINQQ 410
           K N E P E E  I+  + EL+  +D+K  L EL I  AKE EV G +KAII++VP+ Q 
Sbjct: 10  KPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGSRKAIIIFVPVPQL 69

Query: 409 KLYQKIHTRFIRELEKKFSGKHVFICAYRTILPKPSRNSKNTLKQKRPISRTLTSVHDNI 230
           K +QKI  R +RELEKKFSGKHV   A R ILPKP+R S++  KQKRP SRTLTSVHD I
Sbjct: 70  KSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRSKNKQKRPRSRTLTSVHDAI 129

Query: 229 LSDLVFPAEIIGKRTRISVDGKRLIKCHLEKSQQFNIEHKIETVASLYKQLTGKDVAFEF 50
           L DLVFP+EI+GKR R+ +D  RLIK HL+K+QQ N+EHK+ET + +YK+LTGKDV FEF
Sbjct: 130 LEDLVFPSEIVGKRIRVKMDSSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVVFEF 189

Query: 49  PEWNL 35
           PE+ L
Sbjct: 190 PEFQL 194

>sp|P62084|RS7_BRARE 40S ribosomal protein S7
          Length = 194

 Score =  216 bits (550), Expect = 3e-56
 Identities = 111/185 (60%), Positives = 136/185 (73%), Gaps = 1/185 (0%)
 Frame = -2

Query: 586 KYNKEAPTELELQIASFINELQNTNDMKEVLSELMIAGAKECEVSG-KKAIIVYVPINQQ 410
           K N E P E E  I+  + EL+  +D+K  L EL I  AKE EV G +KAII++VP+ Q 
Sbjct: 10  KPNGEKPDEFESGISQALLELEMNSDLKAQLRELHITAAKEIEVGGSRKAIIIFVPVPQL 69

Query: 409 KLYQKIHTRFIRELEKKFSGKHVFICAYRTILPKPSRNSKNTLKQKRPISRTLTSVHDNI 230
           K +QKI  R +RELEKKFSGKHV   A R ILPKP+R S+   KQKRP SRTLT+VHD I
Sbjct: 70  KSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTNVHDAI 129

Query: 229 LSDLVFPAEIIGKRTRISVDGKRLIKCHLEKSQQFNIEHKIETVASLYKQLTGKDVAFEF 50
           L DLVFP+EI+GKR R+ +D  RLIK HL+K+QQ N+EHK+ET A +YK+LTGKDV FEF
Sbjct: 130 LEDLVFPSEIVGKRIRVKLDSSRLIKVHLDKAQQNNVEHKVETFAGVYKKLTGKDVIFEF 189

Query: 49  PEWNL 35
           PE+ L
Sbjct: 190 PEFQL 194

>sp|Q90YR7|RS7_ICTPU 40S ribosomal protein S7
          Length = 194

 Score =  216 bits (550), Expect = 3e-56
 Identities = 110/185 (59%), Positives = 136/185 (73%), Gaps = 1/185 (0%)
 Frame = -2

Query: 586 KYNKEAPTELELQIASFINELQNTNDMKEVLSELMIAGAKECEVSG-KKAIIVYVPINQQ 410
           K N E P E E  I+  + EL+  +D+K  L EL I  AKE EV G +KAII++VP+ Q 
Sbjct: 10  KANGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGSRKAIIIFVPVPQL 69

Query: 409 KLYQKIHTRFIRELEKKFSGKHVFICAYRTILPKPSRNSKNTLKQKRPISRTLTSVHDNI 230
           K +QKI  R +RELEKKFSGKHV   A R ILPKP+R S+   KQKRP SRTLT+VHD I
Sbjct: 70  KAFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAI 129

Query: 229 LSDLVFPAEIIGKRTRISVDGKRLIKCHLEKSQQFNIEHKIETVASLYKQLTGKDVAFEF 50
           L DLV+P+EI+GKR R+ +D  RLIK HL+K+QQ N+EHK+ET A +YK+LTGKDV FEF
Sbjct: 130 LEDLVYPSEIVGKRIRVKLDSSRLIKVHLDKAQQNNVEHKVETFAGVYKKLTGKDVVFEF 189

Query: 49  PEWNL 35
           PE+ L
Sbjct: 190 PEFQL 194

>sp|P02362|RS7_XENLA 40S ribosomal protein S7 (S8)
          Length = 194

 Score =  216 bits (549), Expect = 4e-56
 Identities = 109/185 (58%), Positives = 138/185 (74%), Gaps = 1/185 (0%)
 Frame = -2

Query: 586 KYNKEAPTELELQIASFINELQNTNDMKEVLSELMIAGAKECEV-SGKKAIIVYVPINQQ 410
           K N E P E E  I+  + EL+  +D+K  L EL I  AKE EV +G+KAII++VP+ Q 
Sbjct: 10  KPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGAGRKAIIIFVPVPQL 69

Query: 409 KLYQKIHTRFIRELEKKFSGKHVFICAYRTILPKPSRNSKNTLKQKRPISRTLTSVHDNI 230
           K +QKI  R +RELEKKFSGKHV   A R ILPKP+R S+   KQKRP SRTLT+VHD I
Sbjct: 70  KSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAI 129

Query: 229 LSDLVFPAEIIGKRTRISVDGKRLIKCHLEKSQQFNIEHKIETVASLYKQLTGKDVAFEF 50
           L DLV+P+EI+G+R R+ +DG RLIK HL+K+QQ N+EHK+ET + +YK+LTGKDV FEF
Sbjct: 130 LEDLVYPSEIVGRRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVVFEF 189

Query: 49  PEWNL 35
           PE+ L
Sbjct: 190 PEFQL 194

>sp|Q9VA91|RS7_DROME 40S ribosomal protein S7
          Length = 194

 Score =  211 bits (537), Expect = 1e-54
 Identities = 102/175 (58%), Positives = 133/175 (76%)
 Frame = -2

Query: 568 PTELELQIASFINELQNTNDMKEVLSELMIAGAKECEVSGKKAIIVYVPINQQKLYQKIH 389
           P + E  IA  + EL+  +D+K  L +L I  A+E E   KKA+I+YVPI QQK++QKI 
Sbjct: 15  PDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYVPIPQQKVFQKIQ 74

Query: 388 TRFIRELEKKFSGKHVFICAYRTILPKPSRNSKNTLKQKRPISRTLTSVHDNILSDLVFP 209
              +RELEKKFSGKHV + A R ILPKP+R ++N LKQKRP SRTLT+V+D IL DLVFP
Sbjct: 75  IILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFP 134

Query: 208 AEIIGKRTRISVDGKRLIKCHLEKSQQFNIEHKIETVASLYKQLTGKDVAFEFPE 44
           AEI+GKR R+ +DG +L+K HL+K+QQ  IEHK++T  S+YK+LTG+DV FEFP+
Sbjct: 135 AEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRDVTFEFPD 189

>sp|P62085|RS7_DROYA 40S ribosomal protein S7
          Length = 194

 Score =  209 bits (533), Expect = 3e-54
 Identities = 101/175 (57%), Positives = 132/175 (75%)
 Frame = -2

Query: 568 PTELELQIASFINELQNTNDMKEVLSELMIAGAKECEVSGKKAIIVYVPINQQKLYQKIH 389
           P + E  IA  + EL+  +D+K  L +L I  A+E E   KKA+I+YVPI QQK++QKI 
Sbjct: 15  PDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYVPIPQQKVFQKIQ 74

Query: 388 TRFIRELEKKFSGKHVFICAYRTILPKPSRNSKNTLKQKRPISRTLTSVHDNILSDLVFP 209
              +RELEKKFSGKHV +   R ILPKP+R ++N LKQKRP SRTLT+V+D IL DLVFP
Sbjct: 75  IILVRELEKKFSGKHVVVIGERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFP 134

Query: 208 AEIIGKRTRISVDGKRLIKCHLEKSQQFNIEHKIETVASLYKQLTGKDVAFEFPE 44
           AEI+GKR R+ +DG +L+K HL+K+QQ  IEHK++T  S+YK+LTG+DV FEFP+
Sbjct: 135 AEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRDVTFEFPD 189

>sp|Q9NB21|RS7_CULQU 40S ribosomal protein S7
          Length = 192

 Score =  205 bits (522), Expect = 6e-53
 Identities = 100/175 (57%), Positives = 129/175 (73%)
 Frame = -2

Query: 568 PTELELQIASFINELQNTNDMKEVLSELMIAGAKECEVSGKKAIIVYVPINQQKLYQKIH 389
           P   E QI   I EL+  +D+K  L +L I  A+E E + KKAI++YVP+ +QK +QK+ 
Sbjct: 15  PDAFEGQIGQAILELEMNSDLKPQLRDLHITRAREIEFNNKKAIVIYVPVPKQKAFQKVQ 74

Query: 388 TRFIRELEKKFSGKHVFICAYRTILPKPSRNSKNTLKQKRPISRTLTSVHDNILSDLVFP 209
           TR +RELEKKFSGKHV     R ILPKP R  ++  KQKRP SRTLT+V+D IL DLVFP
Sbjct: 75  TRLVRELEKKFSGKHVVFIGERRILPKPQRGRRDPNKQKRPRSRTLTAVYDAILEDLVFP 134

Query: 208 AEIIGKRTRISVDGKRLIKCHLEKSQQFNIEHKIETVASLYKQLTGKDVAFEFPE 44
           AE++GKR R+ +DG +LIK HL+K+QQ  IEHK++T  S+YK+LTG+DV FEFPE
Sbjct: 135 AEVVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFTSVYKKLTGRDVTFEFPE 189

>sp|P33514|RS7_ANOGA 40S ribosomal protein S7
          Length = 192

 Score =  204 bits (519), Expect = 1e-52
 Identities = 100/175 (57%), Positives = 129/175 (73%)
 Frame = -2

Query: 568 PTELELQIASFINELQNTNDMKEVLSELMIAGAKECEVSGKKAIIVYVPINQQKLYQKIH 389
           P   E QI   I EL+  +D+K  L +L I  A+E E + KKAII+YVP+ +QK +QK+ 
Sbjct: 15  PDAFETQIGQAILELEMNSDLKPQLRDLYITRAREVEFNNKKAIIIYVPVPKQKAFQKVQ 74

Query: 388 TRFIRELEKKFSGKHVFICAYRTILPKPSRNSKNTLKQKRPISRTLTSVHDNILSDLVFP 209
           TR +RELEKKFSGKHV   A R ILPKP R  ++  KQKRP S  +T+V+D IL DLVFP
Sbjct: 75  TRLVRELEKKFSGKHVVFIAERRILPKPMRGRRDPNKQKRPRSPNVTAVYDAILEDLVFP 134

Query: 208 AEIIGKRTRISVDGKRLIKCHLEKSQQFNIEHKIETVASLYKQLTGKDVAFEFPE 44
           AE++GKR R+ +DG +LIK HL+K+QQ  IEHK++T AS+YK+LTG+DV FEFPE
Sbjct: 135 AEVVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFASVYKKLTGRDVTFEFPE 189

>sp|Q962S0|RS7_SPOFR 40S ribosomal protein S7
          Length = 190

 Score =  200 bits (509), Expect = 2e-51
 Identities = 102/181 (56%), Positives = 129/181 (71%)
 Frame = -2

Query: 586 KYNKEAPTELELQIASFINELQNTNDMKEVLSELMIAGAKECEVSGKKAIIVYVPINQQK 407
           K +   P   E  I+  + EL+  +D+K  L EL I  AKE E+  KK+II+YVP+ + K
Sbjct: 7   KASAAEPDVFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLK 66

Query: 406 LYQKIHTRFIRELEKKFSGKHVFICAYRTILPKPSRNSKNTLKQKRPISRTLTSVHDNIL 227
            +QKI  R +RELEKKFSGKHV     R ILPKPS  ++   KQKRP SRTLTSV+D IL
Sbjct: 67  AFQKIQIRLVRELEKKFSGKHVVFIGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAIL 126

Query: 226 SDLVFPAEIIGKRTRISVDGKRLIKCHLEKSQQFNIEHKIETVASLYKQLTGKDVAFEFP 47
            DLVFPAEI+GKR RI +DG +LIK HL+K+QQ  IEHK++T  S+YK+LTG++V FEFP
Sbjct: 127 EDLVFPAEIVGKRIRIKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFP 186

Query: 46  E 44
           E
Sbjct: 187 E 187

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,089,763
Number of Sequences: 369166
Number of extensions: 1350697
Number of successful extensions: 4096
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4076
length of database: 68,354,980
effective HSP length: 105
effective length of database: 48,957,805
effective search space used: 4406202450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00376

  1. Dr_sW_017_A12
  2. Dr_sW_010_B21