Planaria EST Database

DrC_00369

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00369
         (1086 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q15056|IF4H_HUMAN  Eukaryotic translation initiation fact...    69   2e-11
sp|Q9WUK2|IF4H_MOUSE  Eukaryotic translation initiation fact...    68   4e-11
sp|Q8BGD9|IF4B_MOUSE  Eukaryotic translation initiation fact...    49   3e-05
sp|P23588|IF4B_HUMAN  Eukaryotic translation initiation fact...    46   2e-04
sp|P18899|DDR48_YEAST  Stress protein DDR48 (DNA damage-resp...    41   0.005
sp|P13824|ARP2_PLAFA  Clustered-asparagine-rich protein (CARP)     41   0.007
sp|P14196|AAC2_DICDI  AAC-rich mRNA clone AAC11 protein            40   0.015
sp|Q88VK7|IF2_LACPL  Translation initiation factor IF-2            39   0.034
sp|O43952|TGP1_TETTH  G-quartet DNA binding protein TGP1           39   0.034
sp|P38922|HRB1_YEAST  Protein HRB1 (Protein TOM34)                 37   0.075

>sp|Q15056|IF4H_HUMAN Eukaryotic translation initiation factor 4H (eIF-4H)
           (Williams-Beuren syndrome chromosome region 1 protein)
          Length = 248

 Score = 68.9 bits (167), Expect = 2e-11
 Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 2/223 (0%)
 Frame = +2

Query: 2   DEFKGYAYVEFTDPQSLAEALSFNKARIGDNTLKVNVAEGRKKEXXXXXXXXXXXXXXXX 181
           D+FKG+ YVEF +  SL EAL+++ A +GD +L+V++AEGRK++                
Sbjct: 79  DKFKGFCYVEFDEVDSLKEALTYDGALLGDRSLRVDIAEGRKQD---------------- 122

Query: 182 XXXXXXXXXANGFAQNTNDTHYEMINRGNYFAARGGRSNRGT-NQHQYKTDKHNNNQYND 358
                                     +G +   +GG  +RG  +  + +    + + +N 
Sbjct: 123 --------------------------KGGFGFRKGGPDDRGMGSSRESRGGWDSRDDFNS 156

Query: 359 AFR-NYYGTRNRGNYSANRGNYCQESRLRNDSERSVGSSNGAKSNSLQEMGYSNSATAQK 535
            FR ++ G R        R      SR R D     GS+   +  + +E         + 
Sbjct: 157 GFRDDFLGGRGGSRPGDRRTGPPMGSRFR-DGPPLRGSNMDFREPTEEE---------RA 206

Query: 536 DRPKLRLLPRSIDAPLNEQIHSERTAAIFGKGKpreASPVREK 664
            RP+L+L PR++  PLN+   +   +AIFG  +pre    +E+
Sbjct: 207 QRPRLQLKPRTVATPLNQV--ANPNSAIFGGARpreEVVQKEQ 247

>sp|Q9WUK2|IF4H_MOUSE Eukaryotic translation initiation factor 4H (eIF-4H)
           (Williams-Beuren syndrome chromosome region 1 protein
           homolog)
          Length = 248

 Score = 68.2 bits (165), Expect = 4e-11
 Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 2/223 (0%)
 Frame = +2

Query: 2   DEFKGYAYVEFTDPQSLAEALSFNKARIGDNTLKVNVAEGRKKEXXXXXXXXXXXXXXXX 181
           D+FKG+ YVEF +  SL EAL+++ A +GD +L+V++AEGRK++                
Sbjct: 79  DKFKGFCYVEFDEVDSLKEALTYDGALLGDRSLRVDIAEGRKQD---------------- 122

Query: 182 XXXXXXXXXANGFAQNTNDTHYEMINRGNYFAARGGRSNRGT-NQHQYKTDKHNNNQYND 358
                                     +G +   +GG  +RG     + +    + + +N 
Sbjct: 123 --------------------------KGGFGFRKGGPDDRGMGGSRESRGGWDSRDDFNS 156

Query: 359 AFR-NYYGTRNRGNYSANRGNYCQESRLRNDSERSVGSSNGAKSNSLQEMGYSNSATAQK 535
            +R ++ G R        R      SR R D     GS+   +  + +E         + 
Sbjct: 157 GYRDDFLGGRGGSRPGDRRAGPPMGSRFR-DGPPLRGSNMDFREPTEEE---------RA 206

Query: 536 DRPKLRLLPRSIDAPLNEQIHSERTAAIFGKGKpreASPVREK 664
            RP+L+L PR++  PLN+   +   +AIFG  +pre    +E+
Sbjct: 207 QRPRLQLKPRTVATPLNQV--ANPNSAIFGGARpreEVVQKEQ 247

>sp|Q8BGD9|IF4B_MOUSE Eukaryotic translation initiation factor 4B (eIF-4B)
          Length = 611

 Score = 48.5 bits (114), Expect = 3e-05
 Identities = 63/260 (24%), Positives = 102/260 (39%), Gaps = 37/260 (14%)
 Frame = +2

Query: 2   DEFKGYAYVEFTDPQSLAEALSFNKARIGDNTLKVNVAEGRKKEXXXXXXXXXXXXXXXX 181
           D  KG+ Y EF D  SL  ALS N+  +G+  ++V+VA+  + +                
Sbjct: 134 DRLKGFGYAEFEDLDSLLSALSLNEESLGNRRIRVDVADQAQDK------DRDDRSFGRD 187

Query: 182 XXXXXXXXXANGFAQNTNDTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYNDA 361
                     +  A+ T D+        +Y   RG  S     + +Y +D++ +  Y D 
Sbjct: 188 RNRDSDKTDTDWRARPTTDSF------DDYPPRRGDDSFGDKYRDRYDSDRYRDG-YRDG 240

Query: 362 FR-------NYYGTR----NRGNYSANRGNYCQESRL------------RNDSERSVGSS 472
           +R       + YG R    +RG+   +RG    +SR+            R+D  R  G  
Sbjct: 241 YRDGPRRDMDRYGGRDRYDDRGSRDYDRG---YDSRIGSGRRAFGSGYRRDDDYRGGGDR 297

Query: 473 NGAKSNSLQEMGYSNSATAQKD-----------RPKLRLLPRSI---DAPLNEQIHSERT 610
              + +   +  +S+     +D           RP+L L PRS    D        S R 
Sbjct: 298 YEDRYDRRDDRSWSSRDDYSRDDYRRDDRGPPQRPRLNLKPRSAPKEDDASASTSQSSRA 357

Query: 611 AAIFGKGKpreASPVREKRV 670
           A+IFG  KP + +  RE+ V
Sbjct: 358 ASIFGGAKPVDTA-AREREV 376

>sp|P23588|IF4B_HUMAN Eukaryotic translation initiation factor 4B (eIF-4B)
          Length = 611

 Score = 45.8 bits (107), Expect = 2e-04
 Identities = 62/260 (23%), Positives = 101/260 (38%), Gaps = 37/260 (14%)
 Frame = +2

Query: 2   DEFKGYAYVEFTDPQSLAEALSFNKARIGDNTLKVNVAEGRKKEXXXXXXXXXXXXXXXX 181
           +  KG+ Y EF D  SL  ALS N+  +G+  ++V+VA+  + +                
Sbjct: 134 ERLKGFGYAEFEDLDSLLSALSLNEESLGNRRIRVDVADQAQDK------DRDDRSFGRD 187

Query: 182 XXXXXXXXXANGFAQNTNDTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYNDA 361
                     +  A+   D+        +Y   RG  S     + +Y +D++ +  Y D 
Sbjct: 188 RNRDSDKTDTDWRARPATDSF------DDYPPRRGDDSFGDKYRDRYDSDRYRDG-YRDG 240

Query: 362 FR-------NYYGTR----NRGNYSANRGNYCQESRL------------RNDSERSVGSS 472
           +R       + YG R    +RG+   +RG    +SR+            R+D  R  G  
Sbjct: 241 YRDGPRRDMDRYGGRDRYDDRGSRDYDRG---YDSRIGSGRRAFGSGYRRDDDYRGGGDR 297

Query: 473 NGAKSNSLQEMGYSNSATAQKD-----------RPKLRLLPRSI---DAPLNEQIHSERT 610
              + +   +  +S+     +D           RPKL L PRS    D        S R 
Sbjct: 298 YEDRYDRRDDRSWSSRDDYSRDDYRRDDRGPPQRPKLNLKPRSTPEEDDSSASTSQSTRA 357

Query: 611 AAIFGKGKpreASPVREKRV 670
           A+IFG  KP + +  RE+ V
Sbjct: 358 ASIFGGAKPVDTA-AREREV 376

>sp|P18899|DDR48_YEAST Stress protein DDR48 (DNA damage-responsive protein 48) (DDRP 48)
           (YP 75) (Flocculent-specific protein)
          Length = 430

 Score = 41.2 bits (95), Expect = 0.005
 Identities = 26/103 (25%), Positives = 47/103 (45%)
 Frame = +2

Query: 212 NGFAQNTNDTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYNDAFRNYYGTRNR 391
           + +  N ND+ Y   N  +Y ++   +S+ G+N        +NN+ Y     + YG+ N 
Sbjct: 102 DSYGSNNNDS-YGSNNDDSYGSSNKKKSSYGSNNDDSYGSSNNNDSYGSNNNDSYGSNNN 160

Query: 392 GNYSANRGNYCQESRLRNDSERSVGSSNGAKSNSLQEMGYSNS 520
            +Y +N  +    S   N ++ S GS+N     S  +  Y +S
Sbjct: 161 DSYGSNNDDSYGSS---NKNKSSYGSNNDDSYGSNNDDSYGSS 200


 Score = 37.0 bits (84), Expect = 0.098
 Identities = 25/93 (26%), Positives = 47/93 (50%)
 Frame = +2

Query: 212 NGFAQNTNDTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYNDAFRNYYGTRNR 391
           + +  N ND+ Y   N  +Y ++   +S+ G+N        +NN+ Y     + YG+ N+
Sbjct: 221 DSYGSNNNDS-YGSNNDDSYGSSNKKKSSYGSNNDDSYGSSNNNDSYGSNNDDSYGSSNK 279

Query: 392 GNYSANRGNYCQESRLRNDSERSVGSSNGAKSN 490
            N S+   +   +S   ++++ S GSSN  KS+
Sbjct: 280 -NKSSYGSSSNDDSYGSSNNDDSYGSSNKKKSS 311


 Score = 36.2 bits (82), Expect = 0.17
 Identities = 23/88 (26%), Positives = 40/88 (45%)
 Frame = +2

Query: 227 NTNDTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYNDAFRNYYGTRNRGNYSA 406
           ++N+  Y   N  +Y ++   +S+ G+N        +NN+ Y     + YG+ NR   S 
Sbjct: 340 SSNNDSYGSNNDDSYGSSNKKKSSYGSNNDDSYGSSNNNDSYGSNNDDSYGSSNRNKNSY 399

Query: 407 NRGNYCQESRLRNDSERSVGSSNGAKSN 490
              NY       ++++ S GSSN    N
Sbjct: 400 GSSNYGS-----SNNDDSYGSSNRGGRN 422


 Score = 33.1 bits (74), Expect = 1.4
 Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 5/105 (4%)
 Frame = +2

Query: 221 AQNTNDTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYNDAFRNYYGTRNRGNY 400
           + N ND++    N  + + +    S    N   Y +   N + Y     + YG+ N  +Y
Sbjct: 140 SSNNNDSYGS--NNNDSYGSNNNDSYGSNNDDSYGSSNKNKSSYGSNNDDSYGSNNDDSY 197

Query: 401 SANRGNYCQESRLRNDS-----ERSVGSSNGAKSNSLQEMGYSNS 520
            ++           NDS     + S GS+N     S  +  Y +S
Sbjct: 198 GSSNKKKSSYGSSNNDSYGSNNDDSYGSNNNDSYGSNNDDSYGSS 242


 Score = 32.3 bits (72), Expect = 2.4
 Identities = 22/97 (22%), Positives = 40/97 (41%)
 Frame = +2

Query: 227 NTNDTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYNDAFRNYYGTRNRGNYSA 406
           + ND  Y   N  +Y ++   +S+ G++         NN+ Y     + YG+ N  +Y +
Sbjct: 183 SNNDDSYGSNNDDSYGSSNKKKSSYGSS---------NNDSYGSNNDDSYGSNNNDSYGS 233

Query: 407 NRGNYCQESRLRNDSERSVGSSNGAKSNSLQEMGYSN 517
           N  +    S  +  S  S    +   SN+    G +N
Sbjct: 234 NNDDSYGSSNKKKSSYGSNNDDSYGSSNNNDSYGSNN 270


 Score = 30.4 bits (67), Expect = 9.2
 Identities = 27/123 (21%), Positives = 47/123 (38%), Gaps = 20/123 (16%)
 Frame = +2

Query: 212 NGFAQNTNDTHYEMINRGNYFAARGGRSNRGT-----------NQHQYKTDKHNNNQYND 358
           + +  + N+  Y   N  +Y ++   +S+ G+           N   Y +     + Y  
Sbjct: 255 DSYGSSNNNDSYGSNNDDSYGSSNKNKSSYGSSSNDDSYGSSNNDDSYGSSNKKKSSYGS 314

Query: 359 AFRNYYGTRNRGNYSANRGNYCQESRLRNDS-----ERSVGSSNGAK----SNSLQEMGY 511
              + YG+ N  +Y ++           NDS     + S GSSN  K    SN+    G 
Sbjct: 315 NNDDSYGSNNDDSYGSSNKKKSSYGSSNNDSYGSNNDDSYGSSNKKKSSYGSNNDDSYGS 374

Query: 512 SNS 520
           SN+
Sbjct: 375 SNN 377

>sp|P13824|ARP2_PLAFA Clustered-asparagine-rich protein (CARP)
          Length = 443

 Score = 40.8 bits (94), Expect = 0.007
 Identities = 24/103 (23%), Positives = 48/103 (46%)
 Frame = +2

Query: 212 NGFAQNTNDTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYNDAFRNYYGTRNR 391
           N    N ++T ++  N  N   ++G  +N G+N +  +  + NNN  N  F N   + N 
Sbjct: 112 NNNNNNNSNTFFQKNNMNNTNFSQGS-TNYGSN-YNSENFQGNNNMNNYNFYNNNSSNNN 169

Query: 392 GNYSANRGNYCQESRLRNDSERSVGSSNGAKSNSLQEMGYSNS 520
            N   N  N      ++N +  +  ++N + +N +  M ++N+
Sbjct: 170 NNNQTNTQNNFMNRNMKNKNMNNNNNNNNSNNNMMMNMNFNNN 212

>sp|P14196|AAC2_DICDI AAC-rich mRNA clone AAC11 protein
          Length = 448

 Score = 39.7 bits (91), Expect = 0.015
 Identities = 26/121 (21%), Positives = 45/121 (37%)
 Frame = +2

Query: 212 NGFAQNTNDTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYNDAFRNYYGTRNR 391
           N    N N+      N  N        +N  TN +   T+ + NN  N+   N   T N 
Sbjct: 283 NNINNNNNNNSNNNNNSSNNNNNNNNSTNNNTNNNNNNTNNNTNNNNNNINNNNNNTNNN 342

Query: 392 GNYSANRGNYCQESRLRNDSERSVGSSNGAKSNSLQEMGYSNSATAQKDRPKLRLLPRSI 571
            N + N+          +++  +  ++N   +N+      SN+ TA    P    L  S+
Sbjct: 343 NNNANNQNTNNNNMGNNSNNNNNPNNNNHQNNNNNNTSNNSNTTTATTTAPGGNNLTNSL 402

Query: 572 D 574
           +
Sbjct: 403 N 403


 Score = 36.2 bits (82), Expect = 0.17
 Identities = 23/89 (25%), Positives = 34/89 (38%)
 Frame = +2

Query: 209 ANGFAQNTNDTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYNDAFRNYYGTRN 388
           +N    N N T+    N  N        +N   N +   T+ +NNN  N    N     N
Sbjct: 300 SNNNNNNNNSTNNNTNNNNNNTNNNTNNNNNNINNNNNNTNNNNNNANNQNTNN----NN 355

Query: 389 RGNYSANRGNYCQESRLRNDSERSVGSSN 475
            GN S N  N    +   N++  +  +SN
Sbjct: 356 MGNNSNNNNNPNNNNHQNNNNNNTSNNSN 384


 Score = 32.3 bits (72), Expect = 2.4
 Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 3/109 (2%)
 Frame = +2

Query: 212 NGFAQNTNDTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYNDAFRNYYGTR-- 385
           N    N N     + N  N  +     S+   N +   T+ + NN  N+   N       
Sbjct: 272 NNNNNNNNSNINNINNNNNNNSNNNNNSSNNNNNNNNSTNNNTNNNNNNTNNNTNNNNNN 331

Query: 386 -NRGNYSANRGNYCQESRLRNDSERSVGSSNGAKSNSLQEMGYSNSATA 529
            N  N + N  N    ++  N++     S+N    N+      +N+ T+
Sbjct: 332 INNNNNNTNNNNNNANNQNTNNNNMGNNSNNNNNPNNNNHQNNNNNNTS 380


 Score = 31.6 bits (70), Expect = 4.1
 Identities = 19/99 (19%), Positives = 38/99 (38%)
 Frame = +2

Query: 227 NTNDTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYNDAFRNYYGTRNRGNYSA 406
           N+N+ +    N  N        +N   N +    + +NNN  N    N     N  N + 
Sbjct: 268 NSNNNNNNNNNNSNINNINNNNNNNSNNNNNSSNNNNNNN--NSTNNNTNNNNNNTNNNT 325

Query: 407 NRGNYCQESRLRNDSERSVGSSNGAKSNSLQEMGYSNSA 523
           N  N    + + N++  +  ++N A + +       N++
Sbjct: 326 NNNN----NNINNNNNNTNNNNNNANNQNTNNNNMGNNS 360


 Score = 30.4 bits (67), Expect = 9.2
 Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 1/95 (1%)
 Frame = +2

Query: 212 NGFAQNTNDTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYNDAFRNYYGTRNR 391
           N    N N+ +   IN  N        +N  ++ +    +   NN  N+   N     N 
Sbjct: 268 NSNNNNNNNNNNSNINNINNNNNNNSNNNNNSSNNNNNNNNSTNNNTNNNNNNTNNNTNN 327

Query: 392 GNYSANRGNYCQESRLRNDSERSVGSSN-GAKSNS 493
            N + N  N    +   N + ++  ++N G  SN+
Sbjct: 328 NNNNINNNNNNTNNNNNNANNQNTNNNNMGNNSNN 362

>sp|Q88VK7|IF2_LACPL Translation initiation factor IF-2
          Length = 858

 Score = 38.5 bits (88), Expect = 0.034
 Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
 Frame = +2

Query: 257 NRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYNDAFRN---YYGTRNRGNYSANRGNYCQ 427
           N GN  +A   RSN   N     T++ NNN  N+   N      + NR N + NR N   
Sbjct: 126 NNGNR-SANASRSNSARNNGGSNTNRSNNNNNNNRSNNNNRSNTSNNRTNSTGNRTNNGG 184

Query: 428 ESR---------LRNDSERSVGSSNGAKSNSLQEMGYSNS 520
           ++R           N+S RS GS+N +++ S +  G  NS
Sbjct: 185 QNRNNNRTTTNNNNNNSNRSNGSNNSSRNGSGRFGGSLNS 224


 Score = 33.5 bits (75), Expect = 1.1
 Identities = 28/99 (28%), Positives = 43/99 (43%)
 Frame = +2

Query: 224 QNTNDTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYNDAFRNYYGTRNRGNYS 403
           Q +N  H +    G+Y       +NR  NQ+  ++   N N+ N+         N GN S
Sbjct: 82  QQSNSRHQQS---GDYL-----NNNRNNNQNNSQSRNSNGNRSNNGGNR--TNSNNGNRS 131

Query: 404 ANRGNYCQESRLRNDSERSVGSSNGAKSNSLQEMGYSNS 520
           AN          R++S R+ G SN  +SN+      SN+
Sbjct: 132 ANAS--------RSNSARNNGGSNTNRSNNNNNNNRSNN 162


 Score = 32.3 bits (72), Expect = 2.4
 Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 21/92 (22%)
 Frame = +2

Query: 281 RGGRSNRGTNQHQ----YKTDKHNNNQYNDAFRNYYGTR----------NRGNYSAN--- 409
           R     +  ++HQ    Y  +  NNNQ N   RN  G R          N GN SAN   
Sbjct: 77  RTANQQQSNSRHQQSGDYLNNNRNNNQNNSQSRNSNGNRSNNGGNRTNSNNGNRSANASR 136

Query: 410 ----RGNYCQESRLRNDSERSVGSSNGAKSNS 493
               R N    +   N++  +  S+N  +SN+
Sbjct: 137 SNSARNNGGSNTNRSNNNNNNNRSNNNNRSNT 168

>sp|O43952|TGP1_TETTH G-quartet DNA binding protein TGP1
          Length = 725

 Score = 38.5 bits (88), Expect = 0.034
 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 18/99 (18%)
 Frame = +2

Query: 281 RGGRSNRGTNQHQYKTDKHNNNQYND-------AFRNYYGTRNRG-----------NYSA 406
           RG RS+   N++Q   DKH+N+Q N        + +N    +N+            NY  
Sbjct: 490 RGNRSHSQNNRNQRNRDKHHNSQNNQPNKYKNTSVQNNNNNKNQQRSQSQNQRPPRNYDN 549

Query: 407 NRGNYCQESRLRNDSERSVGSSNGAKSNSLQEMGYSNSA 523
            +G   + +R RN++ R+  + NG + N+       NS+
Sbjct: 550 RQGGENRNNRQRNENNRNNFNGNGHRVNNQNNQRNRNSS 588

>sp|P38922|HRB1_YEAST Protein HRB1 (Protein TOM34)
          Length = 429

 Score = 37.4 bits (85), Expect = 0.075
 Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 1/140 (0%)
 Frame = +2

Query: 236 DTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYNDAFRNYYGTRNRGNYSANR- 412
           DT+    +RG Y   RGGR      +  Y+  +  NN+ N   R+ Y  R RG     R 
Sbjct: 28  DTYRGSRDRGEY---RGGR-----ERSDYRERERFNNRDNPRSRDRYDDRRRGRDVTGRY 79

Query: 413 GNYCQESRLRNDSERSVGSSNGAKSNSLQEMGYSNSATAQKDRPKLRLLPRSIDAPLNEQ 592
           GN       R+D  RS  S +  + +S +  G+ +S       P   LL R +D+   E+
Sbjct: 80  GN------RRDDYPRSFRSRHNTRDDS-RRGGFGSSGARGDYGP---LLARELDSTYEEK 129

Query: 593 IHSERTAAIFGKGKpreASP 652
           ++   + +IF      +++P
Sbjct: 130 VNRNYSNSIFVGNLTYDSTP 149

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,007,125
Number of Sequences: 369166
Number of extensions: 1956039
Number of successful extensions: 4933
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4758
length of database: 68,354,980
effective HSP length: 112
effective length of database: 47,664,660
effective search space used: 11868500340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00369

  1. Dr_sW_010_E14
  2. Dr_sW_009_N20
  3. Dr_sW_004_D07