Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_010_E14
(649 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P13824|ARP2_PLAFA Clustered-asparagine-rich protein (CARP) 44 5e-04
sp|P14196|AAC2_DICDI AAC-rich mRNA clone AAC11 protein 44 5e-04
sp|P18899|DDR48_YEAST Stress protein DDR48 (DNA damage-resp... 43 8e-04
sp|P18160|KYK1_DICDI Non-receptor tyrosine kinase spore lys... 43 8e-04
sp|P23637|ERF2_PICPI Eukaryotic peptide chain release facto... 42 0.001
sp|Q88VK7|IF2_LACPL Translation initiation factor IF-2 42 0.002
sp|O43952|TGP1_TETTH G-quartet DNA binding protein TGP1 40 0.004
sp|Q15056|IF4H_HUMAN Eukaryotic translation initiation fact... 40 0.007
sp|Q9WUK2|IF4H_MOUSE Eukaryotic translation initiation fact... 39 0.012
sp|P32770|NRP1_YEAST Asparagine-rich protein (ARP protein) 39 0.015
>sp|P13824|ARP2_PLAFA Clustered-asparagine-rich protein (CARP)
Length = 443
Score = 43.5 bits (101), Expect = 5e-04
Identities = 28/112 (25%), Positives = 49/112 (43%)
Frame = +2
Query: 11 NRYNQKNQANGFAQNTNDTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYNDAF 190
N N N +N F Q N +N N+ G +N G+N + + + NNN N F
Sbjct: 111 NNNNNNNNSNTFFQKNN------MNNTNF---SQGSTNYGSN-YNSENFQGNNNMNNYNF 160
Query: 191 RNYYGTRNRGNYSANRGNYCQESRLRNDSERSVGSSNGAKSNSLQEMGYSNS 346
N + N N N N ++N + + ++N + +N + M ++N+
Sbjct: 161 YNNNSSNNNNNNQTNTQNNFMNRNMKNKNMNNNNNNNNSNNNMMMNMNFNNN 212
Score = 32.0 bits (71), Expect = 1.4
Identities = 27/113 (23%), Positives = 47/113 (41%)
Frame = +2
Query: 20 NQKNQANGFAQNTNDTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYNDAFRNY 199
N KN+ N N+++ M+ N+ + +N NQ+ + +NNN YN+ +N
Sbjct: 184 NMKNKNMNNNNNNNNSNNNMMMNMNFNNNQQMNNNPMLNQNNFML--NNNNNYNNNAKNV 241
Query: 200 YGTRNRGNYSANRGNYCQESRLRNDSERSVGSSNGAKSNSLQEMGYSNSATAQ 358
G S N N N+ + ++N +N+ +NS AQ
Sbjct: 242 NDMYRDGEMSPNHLN-----NNNNNINNNNNNNNNNNNNNNVMFRQNNSHLAQ 289
>sp|P14196|AAC2_DICDI AAC-rich mRNA clone AAC11 protein
Length = 448
Score = 43.5 bits (101), Expect = 5e-04
Identities = 28/130 (21%), Positives = 48/130 (36%)
Frame = +2
Query: 11 NRYNQKNQANGFAQNTNDTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYNDAF 190
N N + N N N+ N N +N TN + T+ + NN N+
Sbjct: 274 NNNNNNSNINNINNNNNNNSNNNNNSSNNNNNNNNSTNNNTNNNNNNTNNNTNNNNNNIN 333
Query: 191 RNYYGTRNRGNYSANRGNYCQESRLRNDSERSVGSSNGAKSNSLQEMGYSNSATAQKDRP 370
N T N N + N+ +++ + ++N +N+ SN+ TA P
Sbjct: 334 NNNNNTNNNNNNANNQNTNNNNMGNNSNNNNNPNNNNHQNNNNNNTSNNSNTTTATTTAP 393
Query: 371 KLRLLPRSID 400
L S++
Sbjct: 394 GGNNLTNSLN 403
Score = 36.6 bits (83), Expect = 0.058
Identities = 24/118 (20%), Positives = 43/118 (36%), Gaps = 2/118 (1%)
Frame = +2
Query: 5 GGNRYNQKNQANGFAQNTNDTHYEMINRGNYFAARGGRSNRGTNQH--QYKTDKHNNNQY 178
G N N N N+N + N N +N N + T+ +NNN
Sbjct: 263 GNGILNSNNNNNNNNNNSNINNINNNNNNNSNNNNNSSNNNNNNNNSTNNNTNNNNNNTN 322
Query: 179 NDAFRNYYGTRNRGNYSANRGNYCQESRLRNDSERSVGSSNGAKSNSLQEMGYSNSAT 352
N+ N N N + N N N++ + ++N +N+ + +N+ +
Sbjct: 323 NNTNNNNNNINNNNNNTNNNNNNANNQNTNNNNMGNNSNNNNNPNNNNHQNNNNNNTS 380
>sp|P18899|DDR48_YEAST Stress protein DDR48 (DNA damage-responsive protein 48) (DDRP 48)
(YP 75) (Flocculent-specific protein)
Length = 430
Score = 42.7 bits (99), Expect = 8e-04
Identities = 27/106 (25%), Positives = 48/106 (45%)
Frame = +2
Query: 29 NQANGFAQNTNDTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYNDAFRNYYGT 208
N + + N ND+ Y N +Y ++ +S+ G+N +NN+ Y + YG+
Sbjct: 99 NNNDSYGSNNNDS-YGSNNDDSYGSSNKKKSSYGSNNDDSYGSSNNNDSYGSNNNDSYGS 157
Query: 209 RNRGNYSANRGNYCQESRLRNDSERSVGSSNGAKSNSLQEMGYSNS 346
N +Y +N + S N ++ S GS+N S + Y +S
Sbjct: 158 NNNDSYGSNNDDSYGSS---NKNKSSYGSNNDDSYGSNNDDSYGSS 200
Score = 38.9 bits (89), Expect = 0.012
Identities = 25/100 (25%), Positives = 43/100 (43%)
Frame = +2
Query: 17 YNQKNQANGFAQNTNDTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYNDAFRN 196
Y N+ ++N+ Y N +Y ++ +S+ G+N +NN+ Y +
Sbjct: 328 YGSSNKKKSSYGSSNNDSYGSNNDDSYGSSNKKKSSYGSNNDDSYGSSNNNDSYGSNNDD 387
Query: 197 YYGTRNRGNYSANRGNYCQESRLRNDSERSVGSSNGAKSN 316
YG+ NR S NY ++++ S GSSN N
Sbjct: 388 SYGSSNRNKNSYGSSNYGS-----SNNDDSYGSSNRGGRN 422
Score = 38.5 bits (88), Expect = 0.015
Identities = 26/96 (27%), Positives = 48/96 (50%)
Frame = +2
Query: 29 NQANGFAQNTNDTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYNDAFRNYYGT 208
N + + N ND+ Y N +Y ++ +S+ G+N +NN+ Y + YG+
Sbjct: 218 NNDDSYGSNNNDS-YGSNNDDSYGSSNKKKSSYGSNNDDSYGSSNNNDSYGSNNDDSYGS 276
Query: 209 RNRGNYSANRGNYCQESRLRNDSERSVGSSNGAKSN 316
N+ N S+ + +S ++++ S GSSN KS+
Sbjct: 277 SNK-NKSSYGSSSNDDSYGSSNNDDSYGSSNKKKSS 311
Score = 35.4 bits (80), Expect = 0.13
Identities = 25/115 (21%), Positives = 43/115 (37%), Gaps = 5/115 (4%)
Frame = +2
Query: 17 YNQKNQANGFAQNTNDTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYNDAFRN 196
Y N + + N ND++ N + + + S N Y + N + Y +
Sbjct: 130 YGSNNDDSYGSSNNNDSYGS--NNNDSYGSNNNDSYGSNNDDSYGSSNKNKSSYGSNNDD 187
Query: 197 YYGTRNRGNYSANRGNYCQESRLRNDS-----ERSVGSSNGAKSNSLQEMGYSNS 346
YG+ N +Y ++ NDS + S GS+N S + Y +S
Sbjct: 188 SYGSNNDDSYGSSNKKKSSYGSSNNDSYGSNNDDSYGSNNNDSYGSNNDDSYGSS 242
Score = 34.7 bits (78), Expect = 0.22
Identities = 24/109 (22%), Positives = 43/109 (39%)
Frame = +2
Query: 17 YNQKNQANGFAQNTNDTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYNDAFRN 196
Y N+ + ND Y N +Y ++ +S+ G++ NN+ Y +
Sbjct: 171 YGSSNKNKSSYGSNNDDSYGSNNDDSYGSSNKKKSSYGSS---------NNDSYGSNNDD 221
Query: 197 YYGTRNRGNYSANRGNYCQESRLRNDSERSVGSSNGAKSNSLQEMGYSN 343
YG+ N +Y +N + S + S S + SN+ G +N
Sbjct: 222 SYGSNNNDSYGSNNDDSYGSSNKKKSSYGSNNDDSYGSSNNNDSYGSNN 270
Score = 32.7 bits (73), Expect = 0.83
Identities = 26/121 (21%), Positives = 46/121 (38%), Gaps = 11/121 (9%)
Frame = +2
Query: 17 YNQKNQANGFAQNTNDTHYEMINRGNYFAARGGRSNRGT--NQHQYKTDKHNNNQYNDAF 190
Y N + + N +D++ + + + + G+ N Y + + Y
Sbjct: 257 YGSSNNNDSYGSNNDDSYGSSNKNKSSYGSSSNDDSYGSSNNDDSYGSSNKKKSSYGSNN 316
Query: 191 RNYYGTRNRGNYSANRGNYCQESRLRNDS-----ERSVGSSNGAK----SNSLQEMGYSN 343
+ YG+ N +Y ++ NDS + S GSSN K SN+ G SN
Sbjct: 317 DDSYGSNNDDSYGSSNKKKSSYGSSNNDSYGSNNDDSYGSSNKKKSSYGSNNDDSYGSSN 376
Query: 344 S 346
+
Sbjct: 377 N 377
Score = 32.3 bits (72), Expect = 1.1
Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 4/120 (3%)
Frame = +2
Query: 17 YNQKNQANGFAQNTNDTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYNDAFRN 196
Y N+ + ND Y N +Y ++ +S+ G++ NN+ Y +
Sbjct: 302 YGSSNKKKSSYGSNNDDSYGSNNDDSYGSSNKKKSSYGSS---------NNDSYGSNNDD 352
Query: 197 YYGTRNRGNYSANRGNYCQESRLRNDSERSVGSSN----GAKSNSLQEMGYSNSATAQKD 364
YG+ N+ S N +S +++ S GS+N G+ + + G SN ++ D
Sbjct: 353 SYGSSNKKKSSYGSNN--DDSYGSSNNNDSYGSNNDDSYGSSNRNKNSYGSSNYGSSNND 410
Score = 31.2 bits (69), Expect = 2.4
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
Frame = +2
Query: 155 DKHNNNQYNDAFRNYYGTRNRGNYSANRGNYCQESRLRNDS-----ERSVGSSNGAK--- 310
D +NN+ Y + YG+ N +Y +N + + NDS + S GSSN K
Sbjct: 73 DSNNNDSYGSNNNDSYGSNNNDSYGSNNNDSYGSN--NNDSYGSNNDDSYGSSNKKKSSY 130
Query: 311 -SNSLQEMGYSNS 346
SN+ G SN+
Sbjct: 131 GSNNDDSYGSSNN 143
Score = 29.6 bits (65), Expect = 7.0
Identities = 15/62 (24%), Positives = 27/62 (43%)
Frame = +2
Query: 161 HNNNQYNDAFRNYYGTRNRGNYSANRGNYCQESRLRNDSERSVGSSNGAKSNSLQEMGYS 340
+NN+ Y + YG+ N +Y +N + S + S S + SN+ G +
Sbjct: 91 NNNDSYGSNNNDSYGSNNNDSYGSNNDDSYGSSNKKKSSYGSNNDDSYGSSNNNDSYGSN 150
Query: 341 NS 346
N+
Sbjct: 151 NN 152
>sp|P18160|KYK1_DICDI Non-receptor tyrosine kinase spore lysis A (Tyrosine-protein kinase
1)
Length = 1584
Score = 42.7 bits (99), Expect = 8e-04
Identities = 34/140 (24%), Positives = 56/140 (40%), Gaps = 7/140 (5%)
Frame = +2
Query: 11 NRYNQKNQANGFAQNTNDTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYNDAF 190
N N N N N N+ + N N N TN + ++ +NNN +++
Sbjct: 453 NNNNNNNNNNNNNNNNNNNNNNNNNNSNSSNTNNNNINNTTNNNNSNSNNNNNNNNSNSN 512
Query: 191 RNYYGTRNRGNYSANRGNYCQESRLRNDSERSVGSSNGAKSNSL---QEMGYSNSATA-- 355
N N N + N N + + + S+GS++ + + SL G +NS++
Sbjct: 513 SN----SNNNNINNNNNNNNNNNNIYLTKKPSIGSTDESSTGSLGGNNSSGNNNSSSGSI 568
Query: 356 --QKDRPKLRLLPRSIDAPL 409
K R P SI+ PL
Sbjct: 569 GNNSSIIKQRSPPHSINGPL 588
Score = 33.9 bits (76), Expect = 0.37
Identities = 23/107 (21%), Positives = 40/107 (37%), Gaps = 1/107 (0%)
Frame = +2
Query: 29 NQANGFAQNTNDTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYN-DAFRNYYG 205
N N N N+ + +I G ++ + + +NNN N + N
Sbjct: 405 NNNNNSNNNNNNNNNNIIGNGKITTTTTTSTSPSSINNNEDISSNNNNNNNNNNNNNNNN 464
Query: 206 TRNRGNYSANRGNYCQESRLRNDSERSVGSSNGAKSNSLQEMGYSNS 346
N N + N N S N++ + ++N + SN+ SNS
Sbjct: 465 NNNNNNNNNNNNNNSNSSNTNNNNINNTTNNNNSNSNNNNNNNNSNS 511
Score = 32.7 bits (73), Expect = 0.83
Identities = 19/89 (21%), Positives = 34/89 (38%)
Frame = +2
Query: 53 NTNDTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYNDAFRNYYGTRNRGNYSA 232
N N+ N N +N N + + +N+N N N T N N ++
Sbjct: 441 NNNEDISSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNSSNTNNNNINNTTNNNNSNS 500
Query: 233 NRGNYCQESRLRNDSERSVGSSNGAKSNS 319
N N S ++S + ++N +N+
Sbjct: 501 NNNNNNNNSNSNSNSNNNNINNNNNNNNN 529
>sp|P23637|ERF2_PICPI Eukaryotic peptide chain release factor GTP-binding subunit (ERF2)
(Translation release factor 3) (ERF3) (ERF-3)
(Omnipotent suppressor protein 2)
Length = 741
Score = 42.0 bits (97), Expect = 0.001
Identities = 46/182 (25%), Positives = 74/182 (40%), Gaps = 6/182 (3%)
Frame = +2
Query: 23 QKNQANGFAQNTNDTHYEMINRGNYF-AARGGRSN---RGTNQHQYKTDKHNNNQYNDAF 190
Q+N G N N+ NRG Y + RGG SN TN +Q +NNN N+++
Sbjct: 68 QQNYNQGGYNNYNNRGGYSNNRGGYNNSNRGGYSNYNSYNTNSNQGGYSNYNNNYANNSY 127
Query: 191 RNYYGTRNRGNYSANRGNYCQESRLRNDSERSVGSSNGAKSN--SLQEMGYSNSATAQKD 364
N N NY+ NY + + D ++ GS + + Q+ + T K
Sbjct: 128 NNNNNYNN--NYNQGYNNYNSQPQ-GQDQQQETGSGQMSLEDYQKQQKESLNKLNTKPKK 184
Query: 365 RPKLRLLPRSIDAPLNEQIHSERTAAIFGKGKpreASPVREKRVSNLSRDSIENRSRPSS 544
KL L ++ AP+ + E + + P +E+ + N EN+ S
Sbjct: 185 VLKLNLNSSTVKAPIVTKKKEEEPV----NQESKTEEPAKEE-IKNQEPAEAENKVEEES 239
Query: 545 RV 550
+V
Sbjct: 240 KV 241
Score = 35.0 bits (79), Expect = 0.17
Identities = 24/67 (35%), Positives = 32/67 (47%)
Frame = +2
Query: 143 QYKTDKHNNNQYNDAFRNYYGTRNRGNYSANRGNYCQESRLRNDSERSVGSSNGAKSNSL 322
QY + N NQ + NY NRG YS NRG Y N+S R S+ + + +
Sbjct: 63 QYGQQQQNYNQ--GGYNNY---NNRGGYSNNRGGY-------NNSNRGGYSNYNSYNTNS 110
Query: 323 QEMGYSN 343
+ GYSN
Sbjct: 111 NQGGYSN 117
Score = 32.3 bits (72), Expect = 1.1
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Frame = +2
Query: 2 GGGNRYNQKNQANGFAQNTNDTHYEMINRGNYFAARGGRSNRGTN--QHQYKTDKHNNNQ 175
GG N N+ +N + NTN +GG SN N + Y + + NN
Sbjct: 90 GGYNNSNRGGYSNYNSYNTNSN-------------QGGYSNYNNNYANNSYNNNNNYNNN 136
Query: 176 YNDAFRNY 199
YN + NY
Sbjct: 137 YNQGYNNY 144
>sp|Q88VK7|IF2_LACPL Translation initiation factor IF-2
Length = 858
Score = 41.6 bits (96), Expect = 0.002
Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 12/124 (9%)
Frame = +2
Query: 11 NRYNQKNQANGFAQNTNDTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYNDAF 190
+R + N++N TN N GN +A RSN N T++ NNN N+
Sbjct: 108 SRNSNGNRSNNGGNRTNS------NNGNR-SANASRSNSARNNGGSNTNRSNNNNNNNRS 160
Query: 191 RN---YYGTRNRGNYSANRGNYCQESR---------LRNDSERSVGSSNGAKSNSLQEMG 334
N + NR N + NR N ++R N+S RS GS+N +++ S + G
Sbjct: 161 NNNNRSNTSNNRTNSTGNRTNNGGQNRNNNRTTTNNNNNNSNRSNGSNNSSRNGSGRFGG 220
Query: 335 YSNS 346
NS
Sbjct: 221 SLNS 224
Score = 40.8 bits (94), Expect = 0.003
Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 7/130 (5%)
Frame = +2
Query: 2 GGGNRYNQKNQANGFAQNTNDTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQ-- 175
GG N N N N N+ NR N R + N ++ T+ +NNN
Sbjct: 144 GGSNTNRSNNNNNNNRSNNNNRSNTSNNRTNSTGNRTNNGGQNRNNNRTTTNNNNNNSNR 203
Query: 176 ---YNDAFRNYYGTRNRGNYSANRGNYCQESRLRNDSERSVGSSNGAKSNSLQEMGYSNS 346
N++ RN G R G+ ++N + N++ R +N +++N Q + N+
Sbjct: 204 SNGSNNSSRNGSG-RFGGSLNSNNNGGGRYRGGNNNNRRRNNRNNKSRNNKNQRIRQVNN 262
Query: 347 --ATAQKDRP 370
A +KD+P
Sbjct: 263 KPAPVRKDKP 272
Score = 37.7 bits (86), Expect = 0.026
Identities = 25/80 (31%), Positives = 37/80 (46%)
Frame = +2
Query: 107 RGGRSNRGTNQHQYKTDKHNNNQYNDAFRNYYGTRNRGNYSANRGNYCQESRLRNDSERS 286
R + ++HQ D NNN+ N+ N + GN S N GN R +S
Sbjct: 77 RTANQQQSNSRHQQSGDYLNNNRNNNQ-NNSQSRNSNGNRSNNGGN-------RTNSNNG 128
Query: 287 VGSSNGAKSNSLQEMGYSNS 346
S+N ++SNS + G SN+
Sbjct: 129 NRSANASRSNSARNNGGSNT 148
Score = 33.5 bits (75), Expect = 0.49
Identities = 28/99 (28%), Positives = 43/99 (43%)
Frame = +2
Query: 50 QNTNDTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYNDAFRNYYGTRNRGNYS 229
Q +N H + G+Y +NR NQ+ ++ N N+ N+ N GN S
Sbjct: 82 QQSNSRHQQS---GDYL-----NNNRNNNQNNSQSRNSNGNRSNNGGNR--TNSNNGNRS 131
Query: 230 ANRGNYCQESRLRNDSERSVGSSNGAKSNSLQEMGYSNS 346
AN R++S R+ G SN +SN+ SN+
Sbjct: 132 ANAS--------RSNSARNNGGSNTNRSNNNNNNNRSNN 162
Score = 33.5 bits (75), Expect = 0.49
Identities = 29/100 (29%), Positives = 47/100 (47%)
Frame = +2
Query: 20 NQKNQANGFAQNTNDTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYNDAFRNY 199
N ++Q +G N N + + N + G RSN G N +T+ +N N+ +A R+
Sbjct: 85 NSRHQQSGDYLNNNRNNNQ--NNSQSRNSNGNRSNNGGN----RTNSNNGNRSANASRSN 138
Query: 200 YGTRNRGNYSANRGNYCQESRLRNDSERSVGSSNGAKSNS 319
RN G + NR N N++ RS +N +SN+
Sbjct: 139 -SARNNGGSNTNRSNN------NNNNNRS---NNNNRSNT 168
Score = 30.8 bits (68), Expect = 3.2
Identities = 23/117 (19%), Positives = 41/117 (35%)
Frame = +2
Query: 11 NRYNQKNQANGFAQNTNDTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYNDAF 190
N NQ N ++N+N GN G R+N + N+ + N
Sbjct: 96 NNNRNNNQNNSQSRNSN---------GNRSNNGGNRTNSNNGNRSANASRSNSARNNGGS 146
Query: 191 RNYYGTRNRGNYSANRGNYCQESRLRNDSERSVGSSNGAKSNSLQEMGYSNSATAQK 361
N N +N N S R +S + ++ G N+ + +N+ + +
Sbjct: 147 NTNRSNNNNNNNRSNNNNRSNTSNNRTNSTGNRTNNGGQNRNNNRTTTNNNNNNSNR 203
>sp|O43952|TGP1_TETTH G-quartet DNA binding protein TGP1
Length = 725
Score = 40.4 bits (93), Expect = 0.004
Identities = 27/115 (23%), Positives = 46/115 (40%)
Frame = +2
Query: 5 GGNRYNQKNQANGFAQNTNDTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYND 184
GG R N+ + N Q D H+ N N+++ + ++NNN N
Sbjct: 487 GGQRGNRSHSQNNRNQRNRDKHHNS-------------QNNQPNKYKNTSVQNNNNNKNQ 533
Query: 185 AFRNYYGTRNRGNYSANRGNYCQESRLRNDSERSVGSSNGAKSNSLQEMGYSNSA 349
R NY +G + +R RN++ R+ + NG + N+ NS+
Sbjct: 534 QRSQSQNQRPPRNYDNRQGGENRNNRQRNENNRNNFNGNGHRVNNQNNQRNRNSS 588
>sp|Q15056|IF4H_HUMAN Eukaryotic translation initiation factor 4H (eIF-4H)
(Williams-Beuren syndrome chromosome region 1 protein)
Length = 248
Score = 39.7 bits (91), Expect = 0.007
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 2/138 (1%)
Frame = +2
Query: 83 NRGNYFAARGGRSNRGT-NQHQYKTDKHNNNQYNDAFRN-YYGTRNRGNYSANRGNYCQE 256
++G + +GG +RG + + + + + +N FR+ + G R R
Sbjct: 122 DKGGFGFRKGGPDDRGMGSSRESRGGWDSRDDFNSGFRDDFLGGRGGSRPGDRRTGPPMG 181
Query: 257 SRLRNDSERSVGSSNGAKSNSLQEMGYSNSATAQKDRPKLRLLPRSIDAPLNEQIHSERT 436
SR R D GS+ + + +E + RP+L+L PR++ PLN+ +
Sbjct: 182 SRFR-DGPPLRGSNMDFREPTEEE---------RAQRPRLQLKPRTVATPLNQV--ANPN 229
Query: 437 AAIFGKGKpreASPVREK 490
+AIFG +pre +E+
Sbjct: 230 SAIFGGARpreEVVQKEQ 247
>sp|Q9WUK2|IF4H_MOUSE Eukaryotic translation initiation factor 4H (eIF-4H)
(Williams-Beuren syndrome chromosome region 1 protein
homolog)
Length = 248
Score = 38.9 bits (89), Expect = 0.012
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
Frame = +2
Query: 83 NRGNYFAARGGRSNRGTN-QHQYKTDKHNNNQYNDAFRN-YYGTRNRGNYSANRGNYCQE 256
++G + +GG +RG + + + + +N +R+ + G R R
Sbjct: 122 DKGGFGFRKGGPDDRGMGGSRESRGGWDSRDDFNSGYRDDFLGGRGGSRPGDRRAGPPMG 181
Query: 257 SRLRNDSERSVGSSNGAKSNSLQEMGYSNSATAQKDRPKLRLLPRSIDAPLNEQIHSERT 436
SR R D GS+ + + +E + RP+L+L PR++ PLN+ +
Sbjct: 182 SRFR-DGPPLRGSNMDFREPTEEE---------RAQRPRLQLKPRTVATPLNQV--ANPN 229
Query: 437 AAIFGKGKpreASPVREK 490
+AIFG +pre +E+
Sbjct: 230 SAIFGGARpreEVVQKEQ 247
>sp|P32770|NRP1_YEAST Asparagine-rich protein (ARP protein)
Length = 719
Score = 38.5 bits (88), Expect = 0.015
Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 1/82 (1%)
Frame = +2
Query: 17 YNQKNQANGFAQNTNDTHYEMINRGNYFAARGGRSNRGTNQHQYKTDKHNNNQYNDAFRN 196
Y N N N N+ N N G + +N + + HNNN +N + +
Sbjct: 487 YRYNNNINNNNNNINNMTNNRYNINNNINGNGNGNGNNSNNNNNHNNNHNNNHHNGSINS 546
Query: 197 YYGT-RNRGNYSANRGNYCQES 259
T N N + N N C +
Sbjct: 547 NSNTNNNNNNNNGNNSNNCNSN 568
Score = 30.4 bits (67), Expect = 4.1
Identities = 20/86 (23%), Positives = 34/86 (39%)
Frame = +2
Query: 89 GNYFAARGGRSNRGTNQHQYKTDKHNNNQYNDAFRNYYGTRNRGNYSANRGNYCQESRLR 268
GN A R N N + + NN+YN N G N ++N N +
Sbjct: 479 GNNNIAPNYRYNNNINNNNNNINNMTNNRYN-INNNINGNGNGNGNNSNNNNNHNNNHNN 537
Query: 269 NDSERSVGSSNGAKSNSLQEMGYSNS 346
N S+ S++ +N+ G +++
Sbjct: 538 NHHNGSINSNSNTNNNNNNNNGNNSN 563
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,290,589
Number of Sequences: 369166
Number of extensions: 1218834
Number of successful extensions: 3686
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3448
length of database: 68,354,980
effective HSP length: 106
effective length of database: 48,773,070
effective search space used: 5316264630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)