Planaria EST Database

DrC_00350

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00350
         (978 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P16930|FAAA_HUMAN  Fumarylacetoacetase (Fumarylacetoaceta...   430   e-120
sp|P35505|FAAA_MOUSE  Fumarylacetoacetase (Fumarylacetoaceta...   415   e-115
sp|P25093|FAAA_RAT  Fumarylacetoacetase (Fumarylacetoacetate...   409   e-114
sp|Q00770|FAAA_EMENI  Fumarylacetoacetase (Fumarylacetoaceta...   280   6e-75
sp|Q8K4G1|LTBP4_MOUSE  Latent transforming growth factor bet...    32   2.1  
sp|Q59050|YG56_METJA  Hypothetical protein MJ1656                  32   2.1  
sp|O83729|Y747_TREPA  Hypothetical protein TP0747                  30   7.9  
sp|Q8J0Q0|MNS1_CANAL  Mannosyl-oligosaccharide 1,2-alpha-man...    30   7.9  

>sp|P16930|FAAA_HUMAN Fumarylacetoacetase (Fumarylacetoacetate hydrolase)
           (Beta-diketonase) (FAA)
          Length = 419

 Score =  430 bits (1106), Expect = e-120
 Identities = 208/325 (64%), Positives = 243/325 (74%)
 Frame = +2

Query: 2   FQLKHDSVKRIGVAIGEQILDLSKIKHLFKGSILKDFQDVFVEHSLNRIMSLGESAWNEL 181
           F  + D   RIGVAIG+QILDLS IKHLF G +L   QDVF + +LN  M LG++AW E 
Sbjct: 22  FSTRGDPRPRIGVAIGDQILDLSIIKHLFTGPVLSKHQDVFNQPTLNSFMGLGQAAWKEA 81

Query: 182 RFTIQELLSMDCPTLRDDVELRKLAFVSMNTAKMHVPAEIGDYTDFYSSKDHAVNVGIMF 361
           R  +Q LLS+    LRDD ELRK AF+S  +A MH+PA IGDYTDFYSS+ HA NVGIMF
Sbjct: 82  RVFLQNLLSVSQARLRDDTELRKCAFISQASATMHLPATIGDYTDFYSSRQHATNVGIMF 141

Query: 362 RGKENALMPNWTWLPVGYHGRSSSIVVSGTPIHRPCGQTKPDDADKPTYGPCKMLDFELE 541
           R KENALMPNW  LPVGYHGR+SS+VVSGTPI RP GQ KPDD+  P YG CK+LD ELE
Sbjct: 142 RDKENALMPNWLHLPVGYHGRASSVVVSGTPIRRPMGQMKPDDSKPPVYGACKLLDMELE 201

Query: 542 MAFFTGPGNKLGQPITMNNAEKNIFGVVLMNDWSARDIQKWEYVPLGPFLGKSFGTTISP 721
           MAFF GPGN+LG+PI ++ A ++IFG+VLMNDWSARDIQKWEYVPLGPFLGKSFGTT+SP
Sbjct: 202 MAFFVGPGNRLGEPIPISKAHEHIFGMVLMNDWSARDIQKWEYVPLGPFLGKSFGTTVSP 261

Query: 722 WVVPIAALKPFLLDYNPSHDHEDLDYLKDDKSFTFDINLEVFIKPKDFXXXXXXXXXXXX 901
           WVVP+ AL PF +  NP  D   L YL  D+ +TFDINL V +K +              
Sbjct: 262 WVVPMDALMPFAVP-NPKQDPRPLPYLCHDEPYTFDINLSVNLKGEGMSQAATICKSNFK 320

Query: 902 YLYWTMKQQLVHHTVNGCNIQPGDL 976
           Y+YWTM QQL HH+VNGCN++PGDL
Sbjct: 321 YMYWTMLQQLTHHSVNGCNLRPGDL 345

>sp|P35505|FAAA_MOUSE Fumarylacetoacetase (Fumarylacetoacetate hydrolase)
           (Beta-diketonase) (FAA)
          Length = 419

 Score =  415 bits (1066), Expect = e-115
 Identities = 201/325 (61%), Positives = 241/325 (74%)
 Frame = +2

Query: 2   FQLKHDSVKRIGVAIGEQILDLSKIKHLFKGSILKDFQDVFVEHSLNRIMSLGESAWNEL 181
           F  + +   RIGVAIG+QILDLS IKHLF G  L   Q VF E +LN  M LG++AW E 
Sbjct: 22  FSTQSNPKPRIGVAIGDQILDLSVIKHLFTGPALSKHQHVFDETTLNNFMGLGQAAWKEA 81

Query: 182 RFTIQELLSMDCPTLRDDVELRKLAFVSMNTAKMHVPAEIGDYTDFYSSKDHAVNVGIMF 361
           R ++Q LLS     LRDD ELR+ AF S  +A MH+PA IGDYTDFYSS+ HA NVGIMF
Sbjct: 82  RASLQNLLSASQARLRDDKELRQRAFTSQASATMHLPATIGDYTDFYSSRQHATNVGIMF 141

Query: 362 RGKENALMPNWTWLPVGYHGRSSSIVVSGTPIHRPCGQTKPDDADKPTYGPCKMLDFELE 541
           RGKENAL+PNW  LPVGYHGR+SSIVVSGTPI RP GQ +PD++  P YG C++LD ELE
Sbjct: 142 RGKENALLPNWLHLPVGYHGRASSIVVSGTPIRRPMGQMRPDNSKPPVYGACRLLDMELE 201

Query: 542 MAFFTGPGNKLGQPITMNNAEKNIFGVVLMNDWSARDIQKWEYVPLGPFLGKSFGTTISP 721
           MAFF GPGN+ G+PI ++ A ++IFG+VLMNDWSARDIQ+WEYVPLGPFLGKSFGTTISP
Sbjct: 202 MAFFVGPGNRFGEPIPISKAHEHIFGMVLMNDWSARDIQQWEYVPLGPFLGKSFGTTISP 261

Query: 722 WVVPIAALKPFLLDYNPSHDHEDLDYLKDDKSFTFDINLEVFIKPKDFXXXXXXXXXXXX 901
           WVVP+ AL PF++  NP  D + L YL   + +TFDINL V +K +              
Sbjct: 262 WVVPMDALMPFVVP-NPKQDPKPLPYLCHSQPYTFDINLSVSLKGEGMSQAATICRSNFK 320

Query: 902 YLYWTMKQQLVHHTVNGCNIQPGDL 976
           ++YWTM QQL HH+VNGCN++PGDL
Sbjct: 321 HMYWTMLQQLTHHSVNGCNLRPGDL 345

>sp|P25093|FAAA_RAT Fumarylacetoacetase (Fumarylacetoacetate hydrolase)
           (Beta-diketonase) (FAA)
          Length = 419

 Score =  409 bits (1052), Expect = e-114
 Identities = 199/325 (61%), Positives = 240/325 (73%)
 Frame = +2

Query: 2   FQLKHDSVKRIGVAIGEQILDLSKIKHLFKGSILKDFQDVFVEHSLNRIMSLGESAWNEL 181
           F  + +   RIGVAIG+QILDLS IKHLF G +L   Q VF E +LN  M LG++AW E 
Sbjct: 22  FSTQSNPKPRIGVAIGDQILDLSVIKHLFTGPVLSKHQHVFDETTLNSFMGLGQAAWKEA 81

Query: 182 RFTIQELLSMDCPTLRDDVELRKLAFVSMNTAKMHVPAEIGDYTDFYSSKDHAVNVGIMF 361
           R ++Q LLS     LRDD ELR+ AF S  +A MH+PA IGDYTDFYSS  HA NVGIMF
Sbjct: 82  RASLQNLLSASQAQLRDDKELRQRAFTSQASATMHLPATIGDYTDFYSSLQHATNVGIMF 141

Query: 362 RGKENALMPNWTWLPVGYHGRSSSIVVSGTPIHRPCGQTKPDDADKPTYGPCKMLDFELE 541
           RGKENAL+PNW  LPVGYHGR+SS+VVSGTPI RP GQ +PD++  P YG  K LD ELE
Sbjct: 142 RGKENALLPNWLHLPVGYHGRASSVVVSGTPIRRPMGQMRPDNSKPPVYGASKRLDMELE 201

Query: 542 MAFFTGPGNKLGQPITMNNAEKNIFGVVLMNDWSARDIQKWEYVPLGPFLGKSFGTTISP 721
           MAFF GPGN+ G+PI ++ A+++IFG+VLMNDWSARDIQ+WEYVPLGPFLGKSFGTTISP
Sbjct: 202 MAFFVGPGNRFGEPIPISKAQEHIFGMVLMNDWSARDIQQWEYVPLGPFLGKSFGTTISP 261

Query: 722 WVVPIAALKPFLLDYNPSHDHEDLDYLKDDKSFTFDINLEVFIKPKDFXXXXXXXXXXXX 901
           WVVP+ AL PF++  NP  D + L YL   + +TFDINL V +K +              
Sbjct: 262 WVVPMDALMPFVVP-NPKQDPKPLPYLCHSQPYTFDINLSVALKGEGMSQAATICRSNFK 320

Query: 902 YLYWTMKQQLVHHTVNGCNIQPGDL 976
           ++YWT+ QQL HH+VNGCN++PGDL
Sbjct: 321 HMYWTILQQLTHHSVNGCNLRPGDL 345

>sp|Q00770|FAAA_EMENI Fumarylacetoacetase (Fumarylacetoacetate hydrolase) (Beta-diketonase)
            (FAA)
          Length = 431

 Score =  280 bits (715), Expect = 6e-75
 Identities = 156/324 (48%), Positives = 202/324 (62%), Gaps = 11/324 (3%)
 Frame = +2

Query: 38   VAIGEQILDLSKIKHLFKGSILKDFQ---DVFVEHSLNRIMSLGESAWNELRFTIQELLS 208
            +AIG+  LDLSK       S L   Q   +VF E +LN   +LG     ++R  IQ++ S
Sbjct: 35   IAIGDYALDLSKFASSGGFSQLPVIQPHLNVFKESTLNAFAALGRPVHRQVREYIQKVFS 94

Query: 209  MDCP---TLRDDVELRKLAFVSMNTAKMHVPAEIGDYTDFYSSKDHAVNVGIMFRGKENA 379
             + P    LRD+  L+K A + ++    H+P +IGDYTDFY+  +HA NVG++FRG +NA
Sbjct: 95   TETPFPQILRDNAALQKEALLPLSEVTNHLPMQIGDYTDFYAGLNHAYNVGVLFRGPDNA 154

Query: 380  LMPNWTWLPVGYHGRSSSIVVSGTPIHRPCGQ--TKPDDADK-PTYGPCKMLDFELEMAF 550
            L PN+  LPV YHGR+SS+V SGTP+HRP GQ  T P    K PT+ PCK LD ELE+AF
Sbjct: 155  LQPNYKHLPVAYHGRASSVVTSGTPLHRPQGQILTNPAANPKLPTFSPCKKLDIELELAF 214

Query: 551  FTGPGNKLGQPITMNNAEKNIFGVVLMNDWSARDIQKWEYVPLGPFLGKSFGTTISPWVV 730
            F    N LG P+ ++ AE +IFGVVLMNDWSARDIQ WEYVPLGPF  K+FGTTI+PWVV
Sbjct: 215  FVSTPNDLGHPVHIDKAEDHIFGVVLMNDWSARDIQAWEYVPLGPFNAKNFGTTITPWVV 274

Query: 731  PIAALKPF-LLDYNPSHDHEDLDYLKDDKSFT-FDINLEVFIKPKDFXXXXXXXXXXXXY 904
             I AL+PF  +   P +    L YL++ ++ T +DI LEV +                  
Sbjct: 275  LIDALEPFRTVGLEPGNRESLLPYLREKRADTAYDIPLEVEVTNAGGEPTVISRSNAKNL 334

Query: 905  LYWTMKQQLVHHTVNGCNIQPGDL 976
            LY +  Q L HHT+ GCN+  GDL
Sbjct: 335  LY-SFPQMLAHHTITGCNLNTGDL 357

>sp|Q8K4G1|LTBP4_MOUSE Latent transforming growth factor beta binding protein 4 precursor
            (LTBP-4)
          Length = 1666

 Score = 32.3 bits (72), Expect = 2.1
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
 Frame = -1

Query: 567  FPGPVKKAISSSKSNILQGPYVGLSASSGFV---CPHGR*IGVPD 442
            FP P + +   S +  L  PY GL A    +   CPHGR + VP+
Sbjct: 1551 FPEPEESSERGSYTGALSEPYEGLEAEECGILDGCPHGRCVRVPE 1595

>sp|Q59050|YG56_METJA Hypothetical protein MJ1656
          Length = 237

 Score = 32.3 bits (72), Expect = 2.1
 Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 11/71 (15%)
 Frame = +2

Query: 518 KMLDFELEMAFFTGPGNKLGQPITMNNAEKNIFGVVLMNDWSARDIQ----KW------- 664
           K +D+E+E+A   G   K  + I  + A   I G  ++ND +ARD+Q    +W       
Sbjct: 86  KRVDYEVELAIVIG---KKCKNIKKDEANDYIMGYTILNDVTARDLQQKDGQWTRAKSFD 142

Query: 665 EYVPLGPFLGK 697
            + P+GP + K
Sbjct: 143 TFCPIGPRIVK 153

>sp|O83729|Y747_TREPA Hypothetical protein TP0747
          Length = 344

 Score = 30.4 bits (67), Expect = 7.9
 Identities = 19/51 (37%), Positives = 31/51 (60%)
 Frame = +2

Query: 5   QLKHDSVKRIGVAIGEQILDLSKIKHLFKGSILKDFQDVFVEHSLNRIMSL 157
           ++KH SV +  V+ GE+I DLSK+   FK      F +VF+  S + +++L
Sbjct: 295 KVKHGSVIQFAVS-GEEIKDLSKLSKYFKEGASSRF-EVFLHGSPDTVLNL 343

>sp|Q8J0Q0|MNS1_CANAL Mannosyl-oligosaccharide 1,2-alpha-mannosidase
           (Man(9)-alpha-mannosidase)
          Length = 565

 Score = 30.4 bits (67), Expect = 7.9
 Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
 Frame = +2

Query: 626 LMNDWSARDIQKWEYVPLGPFL--GKSFGTTISPWVVPIAALKPFLLDYNPSHDHEDLDY 799
           +++ W   +   W Y    P    G++ G     W++ + +L   ++   P       D+
Sbjct: 46  ILDSWHTYEKYGWGYDVYHPIKQEGENMGPKPLGWMI-VDSLDTLMIMDCPEEVSRARDW 104

Query: 800 LKDDKSFTFDINLEVF 847
           +K+D  +TFD N+  F
Sbjct: 105 IKNDLDYTFDYNVNTF 120

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 119,692,853
Number of Sequences: 369166
Number of extensions: 2615432
Number of successful extensions: 6108
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6101
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 10239770530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00350

  1. Dr_sW_009_E24
  2. Dr_sW_014_D20