DrC_00327
- Cluster detail
- GO Category : Not Available
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_00327 (1019 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|P38283|SLI15_YEAST Inner centromere protein (INCENP)-rel... 34 0.59 sp|P22114|TATR_NPVOP Trans-activating transcriptional regul... 34 0.76 sp|P34244|KKK1_YEAST Probable serine/threonine-protein kina... 33 1.00 sp|Q19345|NHR25_CAEEL Nuclear hormone receptor family membe... 33 1.7 sp|Q8K9K5|FLGF_BUCAP Flagellar basal-body rod protein flgF 32 2.2 sp|P25302|SWI4_YEAST Regulatory protein SWI4 (Cell-cycle bo... 32 2.9 sp|P08045|XFIN_XENLA Zinc finger protein Xfin 32 2.9 sp|P24749|G3P_ESCBL Glyceraldehyde-3-phosphate dehydrogenas... 32 3.8 sp|Q08235|BRX1_YEAST Ribosome biogenesis protein BRX1 32 3.8 sp|P38970|HAL5_YEAST Serine/threonine-protein kinase HAL5 (... 32 3.8
>sp|P38283|SLI15_YEAST Inner centromere protein (INCENP)-related protein SLI15 Length = 698 Score = 34.3 bits (77), Expect = 0.59 Identities = 50/247 (20%), Positives = 96/247 (38%), Gaps = 24/247 (9%) Frame = +1 Query: 160 TWKDSTPFFTKKSDLKTYRVQTAQNS-SSREHKCSTPF---------------ARPNTSH 291 T K+S F KKS + + ++ +NS ++ K S+ F +R N H Sbjct: 264 TVKESPIAFKKKSTINSPAIRAVENSDTAGSTKASSVFDRLSSIPTKSFENKISRGNVGH 323 Query: 292 VTSNNRFSYSGTKENEVIGKELLIQNYRPCSRDAMRKFRCRSAEHFAKPSHKTTSIAVGP 471 S++ +G+ +V K I + ++A+R + S K + Sbjct: 324 KYSSSSIDLTGSPMKKVSQKFKSINSTDTDMQEALRDIFSVKNKITKNNSPKGKNSRKSS 383 Query: 472 DKHFDTIA---TNTQQSYQISDYLKKSMNLNDPYERKIFSSVMEVLRKKNRNPNSIDTES 642 FD + T ++ I++ KKS + +D + K P+SI Sbjct: 384 IPRFDKTSLKLTTHKKLAIIAEQKKKSKHSSD-------------VHKTGSRPHSISPTK 430 Query: 643 IAVDPVLQLSEYKSKFRNP-----QNKSVAFPTSKTENIVTVKQPLVCLHKTRPLGQLRP 807 I+VD E K+ +++P + + +K +N+ T + P K + L +L P Sbjct: 431 ISVDSSSPSKEVKNYYQSPVRGYLRPTKASISPNKNKNLTTSQTPHRLKIKEKTLRKLSP 490 Query: 808 QSSTVPR 828 + + + Sbjct: 491 NIADISK 497
>sp|P22114|TATR_NPVOP Trans-activating transcriptional regulatory protein (Immediate early protein 1) (IE-1) Length = 560 Score = 33.9 bits (76), Expect = 0.76 Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 4/81 (4%) Frame = +1 Query: 535 KKSMNLNDPYE----RKIFSSVMEVLRKKNRNPNSIDTESIAVDPVLQLSEYKSKFRNPQ 702 K +M LN Y+ R +F+ + + RK+ N N+ ++ A V Q+ +Y R PQ Sbjct: 327 KTNMLLNKLYQMYQDRSLFTLPIMLSRKEPVNENAPQNKNHAFSYVAQIMKYSKNLRFPQ 386 Query: 703 NKSVAFPTSKTENIVTVKQPL 765 + E IVT K L Sbjct: 387 GDPTQQVMDRLEEIVTQKSSL 407
>sp|P34244|KKK1_YEAST Probable serine/threonine-protein kinase YKL101W Length = 1518 Score = 33.5 bits (75), Expect = 1.00 Identities = 49/221 (22%), Positives = 83/221 (37%), Gaps = 13/221 (5%) Frame = +1 Query: 31 ETPSNIRLNISTSTLNKEVNANI---ENEMKKETFSKNEDDNVHW--MTWKDSTPFFTKK 195 E S + N + + +N E+NA + +++ T S+ E D +T + P F Sbjct: 517 EDTSTVNQNNAITGVNTEINAPVLAQKSQFSINTLSQPESDKAEAEAVTLPPAIPIFNAS 576 Query: 196 SDLKTYRVQTAQNSSSREHKCSTPFARPNTSHVTSNNRFSYSGTKENEVIGKELLIQNYR 375 S T+ +S SR S SN+R S S + E + + Sbjct: 577 SSRIFRNSYTSISSRSRR------------SLRLSNSRLSLSASTSRETVHDNEMPLPQL 624 Query: 376 PCSRDAMRKFRCRSAEHFAKPSHKTTSIAVGPDKHFDTIAT--------NTQQSYQISDY 531 P + R R A H A PS K+ ++ T+A + + Y + Sbjct: 625 P--KSPSRYSLSRRAIH-ASPSTKSIHKSLSRKNIAATVAARRTLQNSASKRSLYSLQSI 681 Query: 532 LKKSMNLNDPYERKIFSSVMEVLRKKNRNPNSIDTESIAVD 654 K+S+NLND +F + + + N N + S+ D Sbjct: 682 SKRSLNLND---LLVFDDPLPSKKPASENVNKSEPHSLESD 719
>sp|Q19345|NHR25_CAEEL Nuclear hormone receptor family member nhr-25 Length = 572 Score = 32.7 bits (73), Expect = 1.7 Identities = 41/201 (20%), Positives = 77/201 (38%), Gaps = 15/201 (7%) Frame = +1 Query: 268 FARPNTSHVTSNNRFSYSGTKENEVIGKELLIQN-YRPCSRDAMRKFRCRSAE--HFAKP 438 F + + +H N S + V+G + Q Y+P ++ + +F + Sbjct: 103 FYKKDRAHRMQRNAMRVSTVQVPAVLGAQSQAQTFYQPPEHQVSSSTTDQNNQINYFDQT 162 Query: 439 SHKTTSIAVGPDKHFD--TIATNTQQSYQISDYLKKSMNLNDPYE--RKIFSSVMEVLRK 606 KT I D H T++++T Q +SD++ + L DP + + S ++ Sbjct: 163 KIKTEYIKTEYDAHLQSPTLSSSTNQQLSVSDFIMRPGYLVDPQDSLAVLLGSTIDDPLL 222 Query: 607 KNRNPNSIDTESIAVDPVLQLSEYKSKFRNPQNKSVAFPTSKTENIVTV--------KQP 762 ++ P + + +P +Y +F + TS T N T+ Q Sbjct: 223 RHTFPAAYQLNEVKQEPF----DYSEQFIHHSLHDYPTYTSNTTNYATMMPMTTVSSTQS 278 Query: 763 LVCLHKTRPLGQLRPQSSTVP 825 LV + G++ SST P Sbjct: 279 LVTSTSSTTTGRMTEASSTSP 299
>sp|Q8K9K5|FLGF_BUCAP Flagellar basal-body rod protein flgF Length = 249 Score = 32.3 bits (72), Expect = 2.2 Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 4/70 (5%) Frame = +1 Query: 19 NHRLETPSNIRLNISTSTLNKEVNAN----IENEMKKETFSKNEDDNVHWMTWKDSTPFF 186 N ++ P+N+ L IS++ + KE+ N IE+ + + ++DN + K++ F+ Sbjct: 122 NGNIKIPNNVNLKISSNGIIKEIKKNKDSIIESTIGSLKLVRLQNDN---LIQKENGLFY 178 Query: 187 TKKSDLKTYR 216 KK +L Y+ Sbjct: 179 LKKDNLNKYK 188
>sp|P25302|SWI4_YEAST Regulatory protein SWI4 (Cell-cycle box factor, chain SWI4) (ART1 protein) Length = 1093 Score = 32.0 bits (71), Expect = 2.9 Identities = 44/181 (24%), Positives = 73/181 (40%), Gaps = 5/181 (2%) Frame = +1 Query: 76 NKEVNANIENEMKKETFSKNEDDNVHWMTWKDSTPFFTKKSDLKTYRVQTAQNSSSR--- 246 N N N E FS NE+DN M+ + TPF +A N+SS+ Sbjct: 425 NNNNNTVASNGSSIEVFSSNENDNSMNMSSRSMTPF-------------SAGNTSSQNKL 471 Query: 247 EHKCSTPFARPNTSHVTSNNRFSYSGTKENEVIGKELLIQNYRPCSRDAMRKFRCRSAEH 426 E+K + + + S+ R S + + LL Y P ++ F H Sbjct: 472 ENKMTDQEYKQTILTILSSERSS--------DVDQALLATLY-PAPKNFNINFEIDDQGH 522 Query: 427 FAKPSHKTTSIAVGP-DKHFDTIATNTQQSYQIS-DYLKKSMNLNDPYERKIFSSVMEVL 600 P H T++A P K T+ N Q ++ + + KS+ N+ Y+ F ++ +L Sbjct: 523 --TPLHWATAMANIPLIKMLITLNANALQCNKLGFNCITKSIFYNNCYKENAFDEIISIL 580 Query: 601 R 603 + Sbjct: 581 K 581
>sp|P08045|XFIN_XENLA Zinc finger protein Xfin Length = 1350 Score = 32.0 bits (71), Expect = 2.9 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 9/58 (15%) Frame = +1 Query: 115 KETFSKNEDDNVHWMTWKDSTPF--------FTKKSDL-KTYRVQTAQNSSSREHKCS 261 K++FS+N D + HW PF FT++S L K +R T + R HKCS Sbjct: 565 KKSFSQNSDLHKHWRIHTGEKPFPCYTCDKSFTERSALIKHHRTHTGE----RPHKCS 618
>sp|P24749|G3P_ESCBL Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) Length = 294 Score = 31.6 bits (70), Expect = 3.8 Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 12/90 (13%) Frame = +1 Query: 166 KDSTPFFTKKSDLKTYRVQTAQNSSSREHKCSTPFAR------------PNTSHVTSNNR 309 KDSTP F + ++ TY Q +++S C P A+ T H T+ + Sbjct: 109 KDSTPMFVRGANFDTYAGQDIVSNASCTTNCLAPLAKVVNDNFGIVEALMTTVHATTATQ 168 Query: 310 FSYSGTKENEVIGKELLIQNYRPCSRDAMR 399 + G + G QN P S A + Sbjct: 169 KTVDGPSHKDWRGGRGASQNIIPSSTGAAK 198
>sp|Q08235|BRX1_YEAST Ribosome biogenesis protein BRX1 Length = 291 Score = 31.6 bits (70), Expect = 3.8 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -3 Query: 759 LFNCNNIFCFRCRKSY*FILWISK 688 L+NCNN+ F RK LW+SK Sbjct: 80 LYNCNNVLFFEARKHQDLYLWLSK 103
>sp|P38970|HAL5_YEAST Serine/threonine-protein kinase HAL5 (Halotolerence protein 5) Length = 855 Score = 31.6 bits (70), Expect = 3.8 Identities = 17/47 (36%), Positives = 31/47 (65%), Gaps = 1/47 (2%) Frame = +1 Query: 10 APENHRLETPSNIRLNISTSTLNKEVNANIENEM-KKETFSKNEDDN 147 AP++H+L P+ +L++S S +E + N ENEM +E+F +D++ Sbjct: 78 APKHHKLGVPNIAKLSLSPS---REPSLNSENEMFSQESFISEKDED 121
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,223,962
Number of Sequences: 369166
Number of extensions: 1918883
Number of successful extensions: 5379
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5376
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 10909662060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Cluster detail
