DrC_00281
- Cluster detail
- GO Category : Not Available
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_00281 (1041 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|Q7T019|DZP1_BRARE Zinc finger protein Dzip1 (DAZ-interac... 54 7e-07 sp|Q86YF9|DZIP1_HUMAN Zinc finger protein DZIP1 (DAZ-intera... 47 7e-05 sp|Q8BMD2|DZIP1_MOUSE Zinc finger protein DZIP1 (DAZ-intera... 45 3e-04 sp|Q96YR5|RAD50_SULTO DNA double-strand break repair rad50 ... 43 0.001 sp|O95819|M4K4_HUMAN Mitogen-activated protein kinase kinas... 43 0.002 sp|Q9FLH0|NMCP_ARATH Putative nuclear matrix constituent pr... 42 0.002 sp|Q9JIX8|ACINU_MOUSE Apoptotic chromatin condensation indu... 42 0.003 sp|P15924|DESP_HUMAN Desmoplakin (DP) (250/210 kDa paraneop... 40 0.011 sp|Q09863|YAFA_SCHPO Hypothetical protein C29E6.10c in chro... 40 0.014 sp|Q14151|SAFB2_HUMAN Scaffold attachment factor B2 39 0.025
>sp|Q7T019|DZP1_BRARE Zinc finger protein Dzip1 (DAZ-interacting protein 1 homolog) (Iguana protein) Length = 898 Score = 53.9 bits (128), Expect = 7e-07 Identities = 37/146 (25%), Positives = 73/146 (50%), Gaps = 2/146 (1%) Frame = +2 Query: 2 CPYCEKAFLNGTFLQAHLEKRHADRYIKDWYLIENQRKRSPKREHSEERPAEKDKTLELI 181 C +CEKAF+N +FLQ+H+++RH + + +NQ+K + E ++ L L+ Sbjct: 209 CQHCEKAFMNASFLQSHMQRRHPSEFDMK-LMTDNQKKIQTVKLQDEINKLQEQ--LTLV 265 Query: 182 LQKLMEQRKGSPVQQKNYDDDLRRMLSEFDRERREW-QLQMDRLKDEIEKLRHQLWLANQ 358 ++ Q+K +Q + +L + EF R+ W + + R+ +I++++ Sbjct: 266 TSQMETQQKDYTAKQ---EKELIQRQEEFKRQLEIWKEEEKMRMNSKIDEVKQACQRDMD 322 Query: 359 KPRSHLKNLEDD-LDHEQDNIERARQ 433 +NLE + L +Q NI+ + Q Sbjct: 323 SINQRNRNLETELLKLQQKNIQESMQ 348
>sp|Q86YF9|DZIP1_HUMAN Zinc finger protein DZIP1 (DAZ-interacting protein 1/2) Length = 867 Score = 47.4 bits (111), Expect = 7e-05 Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 10/155 (6%) Frame = +2 Query: 2 CPYCEKAFLNGTFLQAHLEKRHADRYIKDWYLIENQRKRSPKREHSEERPAE---KDKTL 172 C +C+KAF+N FLQ+H+++RH + EN K E+ +E + L Sbjct: 200 CHFCDKAFMNQAFLQSHIQRRHTE---------ENSHFEYQKNAQIEKLRSEIVVLKEEL 250 Query: 173 ELILQKLMEQRKGSPVQ-------QKNYDDDLRRMLSEFDRERREWQLQMDRLKDEIEKL 331 +L +L S V+ QK ++D ++ FDR + E + ++L DE+EK+ Sbjct: 251 QLTRSELEAAHHASAVRFSKEYEMQKTKEEDFLKL---FDRWKEE---EKEKLVDEMEKV 304 Query: 332 RHQLWLANQKPRSHLKNLEDDLDHEQDNIERARQK 436 + K L + L+++ I+++ + Sbjct: 305 KEMF----MKEFKELTSKNSALEYQLSEIQKSNMQ 335
>sp|Q8BMD2|DZIP1_MOUSE Zinc finger protein DZIP1 (DAZ-interacting protein 1 homolog) Length = 852 Score = 45.4 bits (106), Expect = 3e-04 Identities = 31/118 (26%), Positives = 64/118 (54%), Gaps = 7/118 (5%) Frame = +2 Query: 2 CPYCEKAFLNGTFLQAHLEKRHADRYIKDWYLIENQRKRSPKREHSEERPAEKDKTLELI 181 C +C+KAF+N FLQ+H+++RH + D +L N + ++ + + + E+ L+L Sbjct: 185 CHFCDKAFMNQAFLQSHIQRRHTE----DSHLEYNTKAQTDRLQKEIDMLKEQ---LQLT 237 Query: 182 LQKLMEQRKGSPVQ-------QKNYDDDLRRMLSEFDRERREWQLQMDRLKDEIEKLR 334 +L + V+ QK+ ++D ++ FDR + E + ++L +E+EK++ Sbjct: 238 RSQLESAQHSHAVRFSKDYEMQKSKEEDFLKL---FDRWKEE---EKEKLLEEMEKVK 289
>sp|Q96YR5|RAD50_SULTO DNA double-strand break repair rad50 ATPase Length = 879 Score = 43.1 bits (100), Expect = 0.001 Identities = 35/119 (29%), Positives = 65/119 (54%), Gaps = 2/119 (1%) Frame = +2 Query: 95 LIENQRKRSPKREHSEERPAEKDKTLELILQKLMEQRKGSPVQQKNYDDDLRRMLSEFDR 274 +IE Q K E SE + +K+K LE I ++L + ++K Y+D ++ E + Sbjct: 183 IIELQSLEKYKNE-SENQKIQKEKELENIKRELEDLNIKEEKERKKYEDIVKLNEEEEKK 241 Query: 275 ERREWQL--QMDRLKDEIEKLRHQLWLANQKPRSHLKNLEDDLDHEQDNIERARQKAID 445 E+R +L +++LKD+I +LR ++ N + R + LE D+ E+D + ++K I+ Sbjct: 242 EKRYVELISLLNKLKDDISELREEVKDEN-RLREEKEKLEKDI-LEKDKLIEEKEKIIE 298
>sp|O95819|M4K4_HUMAN Mitogen-activated protein kinase kinase kinase kinase 4 (MAPK/ERK kinase kinase kinase 4) (MEK kinase kinase 4) (MEKKK 4) (HPK/GCK-like kinase HGK) (Nck interacting kinase) Length = 1239 Score = 42.7 bits (99), Expect = 0.002 Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 15/157 (9%) Frame = +2 Query: 26 LNGTFLQAHLEKRHADRYIKDWYLIENQRKRSPK---------REHSEERPAEKDKTLEL 178 L FL+ E + ++ L++ Q+ R + R+ E+ E+ + LE Sbjct: 352 LRRDFLRLQQENKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQRRRLEE 411 Query: 179 ILQKLMEQRKGSPVQQKNYDDDLRRMLSEFDR------ERREWQLQMDRLKDEIEKLRHQ 340 ++ E R+ +Q+ + + +R L E +R ERR + + R++ E E +R Q Sbjct: 412 QQRREREARRQQEREQRRREQEEKRRLEELERRRKEEEERRRAEEEKRRVEREQEYIRRQ 471 Query: 341 LWLANQKPRSHLKNLEDDLDHEQDNIERARQKAIDDH 451 L ++ + HL+ L+ L EQ + R + +++H Sbjct: 472 L----EEEQRHLEVLQQQLLQEQAMLLECRWREMEEH 504
>sp|Q9FLH0|NMCP_ARATH Putative nuclear matrix constituent protein 1-like protein (NMCP1-like) Length = 1042 Score = 42.4 bits (98), Expect = 0.002 Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 5/124 (4%) Frame = +2 Query: 92 YLIENQRKRSPKREHSEERPAEKDKTLE---LILQKLMEQRKGSPVQQKNYDDDLRRMLS 262 Y IEN+R+ E+ E++K LE + K M +++ VQ + D R+ Sbjct: 657 YCIENKREELENSSRDREKAFEQEKKLEEERIQSLKEMAEKELEHVQVELKRLDAERLEI 716 Query: 263 EFDRERREWQLQMDRLKDEIEKLRHQLWLANQKPRSHLKNLEDDLDHEQDNIERAR--QK 436 + DRERRE + LKD +E+L+ Q + R L+ D++ HE + +++ + Sbjct: 717 KLDRERRE--REWAELKDSVEELKVQREKL-ETQRHMLRAERDEIRHEIEELKKLENLKV 773 Query: 437 AIDD 448 A+DD Sbjct: 774 ALDD 777
>sp|Q9JIX8|ACINU_MOUSE Apoptotic chromatin condensation inducer in the nucleus (Acinus) Length = 1338 Score = 42.0 bits (97), Expect = 0.003 Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 11/126 (8%) Frame = +2 Query: 101 ENQRKRSPKREHSEERPAEKDKTLELILQKLMEQRKGSP-----------VQQKNYDDDL 247 +++ K+S K+E ++E P K +L L + K +P + QK + Sbjct: 1189 KSKEKKSEKKEKAQEEPPAK------LLDDLFRKTKAAPCIYWLPLTESQIVQKEAEQAE 1242 Query: 248 RRMLSEFDRERREWQLQMDRLKDEIEKLRHQLWLANQKPRSHLKNLEDDLDHEQDNIERA 427 R E R+ RE + Q +R K+ + QL +K R H + E D + E+D +R Sbjct: 1243 RAKEREKRRKEREEEEQKEREKEAERERNRQL--EREKRREHSRERERDRERERDRGDRE 1300 Query: 428 RQKAID 445 R++ D Sbjct: 1301 RERERD 1306
>sp|P15924|DESP_HUMAN Desmoplakin (DP) (250/210 kDa paraneoplastic pemphigus antigen) Length = 2871 Score = 40.0 bits (92), Expect = 0.011 Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 12/118 (10%) Frame = +2 Query: 104 NQRKRSPKREHSEERPAEKD--------KTLELILQKLMEQRKGSPVQQKNYDDDLRRML 259 N+ KR+ + + + E++ K + + L +Q + + + +K +DDLR+ Sbjct: 1578 NRLKRTASEDSCKRKKLEEELEGMRRSLKEQAIKITNLTQQLEQASIVKKRSEDDLRQQR 1637 Query: 260 SEFD---RERREWQLQMDRLKDEIEKLRHQLWLANQK-PRSHLKNLEDDLDHEQDNIE 421 D RE++ Q ++ RL E+E LR QL + ++HL+N +H Q IE Sbjct: 1638 DVLDGHLREKQRTQEELRRLSSEVEALRRQLLQEQESVKQAHLRN-----EHFQKAIE 1690
>sp|Q09863|YAFA_SCHPO Hypothetical protein C29E6.10c in chromosome I Length = 1085 Score = 39.7 bits (91), Expect = 0.014 Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 4/134 (2%) Frame = +2 Query: 41 LQAHLEKRHADRYIKDWYLIE--NQRKRSP--KREHSEERPAEKDKTLELILQKLMEQRK 208 LQA+ EK R K IE N+RK+ K+ +E+ +K K L+L ++ ++R+ Sbjct: 557 LQAYREKVAQQRQAKLLEEIEEENKRKQERELKKIREKEKKRDKKKQLKLAKEEERQRRE 616 Query: 209 GSPVQQKNYDDDLRRMLSEFDRERREWQLQMDRLKDEIEKLRHQLWLANQKPRSHLKNLE 388 + ++ L E R++RE Q RLK E EK + +L ++ + K E Sbjct: 617 AERLAEQAAQKALEAKRQEEARKKREEQ----RLKREQEKKQQELERQKREEKQKQKERE 672 Query: 389 DDLDHEQDNIERAR 430 L +Q +R + Sbjct: 673 KKLKKQQQEADREK 686
Score = 34.3 bits (77), Expect = 0.60
Identities = 33/152 (21%), Positives = 71/152 (46%), Gaps = 23/152 (15%)
Frame = +2
Query: 59 KRHADRYIKDWYLIENQRKRSPKRE-----HSEERPAEKDKTLELILQKLMEQRKGSPVQ 223
KR +R +K + E ++KR K++ E + E ++ E QK +E ++ +
Sbjct: 581 KRKQERELKK--IREKEKKRDKKKQLKLAKEEERQRREAERLAEQAAQKALEAKRQEEAR 638
Query: 224 QKNYDDDLRR----MLSEFDRERREWQLQMDRLKDEIEKLRHQLWLANQKPRSHLKNLED 391
+K + L+R E +R++RE + + K+ +KL+ Q A+++ + + L +
Sbjct: 639 KKREEQRLKREQEKKQQELERQKRE---EKQKQKEREKKLKKQQQEADREKMAREQRLRE 695
Query: 392 D--------------LDHEQDNIERARQKAID 445
+ LD E++ ER R++ ++
Sbjct: 696 EEEKRILEERKRREKLDKEEE--ERRRRELLE 725
Score = 31.6 bits (70), Expect = 3.9
Identities = 24/103 (23%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Frame = +2
Query: 140 EERPAEKDKTLELILQKLMEQRKGSPVQQKNYDDDLRRMLSEFDRERREWQLQMDRLKDE 319
E+R E + ++ +L EQR ++K ++L E + E + Q + E
Sbjct: 534 EQRMEEGRRMFQIFAARLFEQRVLQAYREKVAQQRQAKLLEEIEEENKRKQ------ERE 587
Query: 320 IEKLRHQLWLANQKPRSHLKNLEDDLDHEQDNI-ERARQKAID 445
++K+R + ++K + L E+ E + + E+A QKA++
Sbjct: 588 LKKIREKEKKRDKKKQLKLAKEEERQRREAERLAEQAAQKALE 630
>sp|Q14151|SAFB2_HUMAN Scaffold attachment factor B2 Length = 953 Score = 38.9 bits (89), Expect = 0.025 Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 5/114 (4%) Frame = +2 Query: 110 RKRSPKREHSEERPAE-KDKTLELILQKLMEQRKGSPVQQKNYDDDLRRMLSEFDRERRE 286 ++RS K S++R +E K+K L K+ EQR+ +Q+ + ++R +RE+RE Sbjct: 592 KERSSK---SQDRKSESKEKRDILSFDKIKEQRERE--RQRQREREIRETERRREREQRE 646 Query: 287 WQLQMDRLKDEIEKLRHQ---LWLANQKPRSHLKNLE-DDLDHEQDNIERARQK 436 + +++ + EK R Q L L Q+ R + +E + L+ E+ +ER R+K Sbjct: 647 REQRLEAFHERKEKARLQRERLQLECQRQRLERERMERERLERERMRVERERRK 700
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,692,039
Number of Sequences: 369166
Number of extensions: 2080253
Number of successful extensions: 8713
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8631
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 11244607825
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Cluster detail
