DrC_00280
- Cluster detail
- GO Category :
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_00280 (1338 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|P46472|PRS7_XENLA 26S protease regulatory subunit 7 (MSS... 691 0.0 sp|P46471|PRS7_MOUSE 26S protease regulatory subunit 7 (MSS... 690 0.0 sp|P35998|PRS7_HUMAN 26S protease regulatory subunit 7 (MSS... 690 0.0 sp|Q63347|PRS7_RAT 26S protease regulatory subunit 7 (MSS1 ... 687 0.0 sp|Q18787|PRS7_CAEEL Probable 26S protease regulatory subun... 651 0.0 sp|O64982|PRS7_PRUPE 26S protease regulatory subunit 7 (26S... 625 e-179 sp|Q41365|PRS7_SPIOL 26S protease regulatory subunit 7 (26S... 625 e-178 sp|Q9FXT9|PRS7_ORYSA 26S protease regulatory subunit 7 (26S... 622 e-178 sp|Q9SSB5|PRS7_ARATH 26S protease regulatory subunit 7 (26S... 621 e-177 sp|P33299|PRS7_YEAST 26S protease regulatory subunit 7 homo... 587 e-167
>sp|P46472|PRS7_XENLA 26S protease regulatory subunit 7 (MSS1 protein) Length = 433 Score = 691 bits (1783), Expect = 0.0 Identities = 349/433 (80%), Positives = 374/433 (86%), Gaps = 1/433 (0%) Frame = +2 Query: 11 MPDYLGTDQRXXXXXXXXXXXX-SLDEGDIALLKTYGAAPYSKEIKQCEDDNQNILKRVN 187 MPDYLG DQR SLDEGDIALLKTYG + YS++IKQ EDD Q +LK++N Sbjct: 1 MPDYLGADQRKTKEEEKEDKPIRSLDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKIN 60 Query: 188 ELAGVKESDTGXXXXXXXXXXXXKVCLSSEHPLQVARCTKIINADSEEPKYIINVKQFAK 367 EL G+KESDTG K L SE PLQVARCTKIINADSE+PKYIINVKQFAK Sbjct: 61 ELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK 120 Query: 368 FVVDLAETVAPTDIEEGMRVGVDRTKYQIHIPLPPKIDPSVTMMQVEEKPDVTYSDVGGC 547 FVVDL++ VAPTDIEEGMRVGVDR KYQIHIPLPPKIDP+VTMMQVEEKPDVTYSDVGGC Sbjct: 121 FVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGC 180 Query: 548 KEQIEKLREVVEMPMLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRV 727 KEQIEKLREVVE P+LHPE+FVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRV Sbjct: 181 KEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRV 240 Query: 728 IGSELVQKYVGEGARMVRELFELARSKKACIIFFDEIXXXXXXXXXXXXXXXNEVQRTML 907 IGSELVQKYVGEGARMVRELFE+AR+KKAC+IFFDEI NEVQRTML Sbjct: 241 IGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTML 300 Query: 908 ELINQLDGFDPRGNIKVLMATNRPDTLDPALVRPGRLDRKVEFGLPDLDGRTQIFKIHAR 1087 ELINQLDGFDPRGNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDL+GRT IFKIHAR Sbjct: 301 ELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHAR 360 Query: 1088 SMSVEKDIRYELLSRLCPNSTGAEIRSVCTEAGMFAIRSRRKMATEKDFLDAVTKVIKGC 1267 SMSVE+DIR+ELL+RLCPNSTGAEIRSVCTEAGMFAIR+RRK+ATEKDFL+AV KVIK Sbjct: 361 SMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVNKVIKSY 420 Query: 1268 AKFSATPRYMTYN 1306 AKFSATPRYMTYN Sbjct: 421 AKFSATPRYMTYN 433
>sp|P46471|PRS7_MOUSE 26S protease regulatory subunit 7 (MSS1 protein) Length = 433 Score = 690 bits (1780), Expect = 0.0 Identities = 348/433 (80%), Positives = 374/433 (86%), Gaps = 1/433 (0%) Frame = +2 Query: 11 MPDYLGTDQRXXXXXXXXXXXX-SLDEGDIALLKTYGAAPYSKEIKQCEDDNQNILKRVN 187 MPDYLG DQR +LDEGDIALLKTYG + YS++IKQ EDD Q +LK++N Sbjct: 1 MPDYLGADQRKTKEEEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKIN 60 Query: 188 ELAGVKESDTGXXXXXXXXXXXXKVCLSSEHPLQVARCTKIINADSEEPKYIINVKQFAK 367 EL G+KESDTG K L SE PLQVARCTKIINADSE+PKYIINVKQFAK Sbjct: 61 ELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK 120 Query: 368 FVVDLAETVAPTDIEEGMRVGVDRTKYQIHIPLPPKIDPSVTMMQVEEKPDVTYSDVGGC 547 FVVDL++ VAPTDIEEGMRVGVDR KYQIHIPLPPKIDP+VTMMQVEEKPDVTYSDVGGC Sbjct: 121 FVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGC 180 Query: 548 KEQIEKLREVVEMPMLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRV 727 KEQIEKLREVVE P+LHPE+FVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRV Sbjct: 181 KEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRV 240 Query: 728 IGSELVQKYVGEGARMVRELFELARSKKACIIFFDEIXXXXXXXXXXXXXXXNEVQRTML 907 IGSELVQKYVGEGARMVRELFE+AR+KKAC+IFFDEI NEVQRTML Sbjct: 241 IGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTML 300 Query: 908 ELINQLDGFDPRGNIKVLMATNRPDTLDPALVRPGRLDRKVEFGLPDLDGRTQIFKIHAR 1087 ELINQLDGFDPRGNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDL+GRT IFKIHAR Sbjct: 301 ELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHAR 360 Query: 1088 SMSVEKDIRYELLSRLCPNSTGAEIRSVCTEAGMFAIRSRRKMATEKDFLDAVTKVIKGC 1267 SMSVE+DIR+ELL+RLCPNSTGAEIRSVCTEAGMFAIR+RRK+ATEKDFL+AV KVIK Sbjct: 361 SMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSY 420 Query: 1268 AKFSATPRYMTYN 1306 AKFSATPRYMTYN Sbjct: 421 AKFSATPRYMTYN 433
>sp|P35998|PRS7_HUMAN 26S protease regulatory subunit 7 (MSS1 protein) Length = 433 Score = 690 bits (1780), Expect = 0.0 Identities = 348/433 (80%), Positives = 374/433 (86%), Gaps = 1/433 (0%) Frame = +2 Query: 11 MPDYLGTDQRXXXXXXXXXXXX-SLDEGDIALLKTYGAAPYSKEIKQCEDDNQNILKRVN 187 MPDYLG DQR +LDEGDIALLKTYG + YS++IKQ EDD Q +LK++N Sbjct: 1 MPDYLGADQRKTKEDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKIN 60 Query: 188 ELAGVKESDTGXXXXXXXXXXXXKVCLSSEHPLQVARCTKIINADSEEPKYIINVKQFAK 367 EL G+KESDTG K L SE PLQVARCTKIINADSE+PKYIINVKQFAK Sbjct: 61 ELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK 120 Query: 368 FVVDLAETVAPTDIEEGMRVGVDRTKYQIHIPLPPKIDPSVTMMQVEEKPDVTYSDVGGC 547 FVVDL++ VAPTDIEEGMRVGVDR KYQIHIPLPPKIDP+VTMMQVEEKPDVTYSDVGGC Sbjct: 121 FVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGC 180 Query: 548 KEQIEKLREVVEMPMLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRV 727 KEQIEKLREVVE P+LHPE+FVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRV Sbjct: 181 KEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRV 240 Query: 728 IGSELVQKYVGEGARMVRELFELARSKKACIIFFDEIXXXXXXXXXXXXXXXNEVQRTML 907 IGSELVQKYVGEGARMVRELFE+AR+KKAC+IFFDEI NEVQRTML Sbjct: 241 IGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTML 300 Query: 908 ELINQLDGFDPRGNIKVLMATNRPDTLDPALVRPGRLDRKVEFGLPDLDGRTQIFKIHAR 1087 ELINQLDGFDPRGNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDL+GRT IFKIHAR Sbjct: 301 ELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHAR 360 Query: 1088 SMSVEKDIRYELLSRLCPNSTGAEIRSVCTEAGMFAIRSRRKMATEKDFLDAVTKVIKGC 1267 SMSVE+DIR+ELL+RLCPNSTGAEIRSVCTEAGMFAIR+RRK+ATEKDFL+AV KVIK Sbjct: 361 SMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSY 420 Query: 1268 AKFSATPRYMTYN 1306 AKFSATPRYMTYN Sbjct: 421 AKFSATPRYMTYN 433
>sp|Q63347|PRS7_RAT 26S protease regulatory subunit 7 (MSS1 protein) Length = 433 Score = 687 bits (1773), Expect = 0.0 Identities = 347/433 (80%), Positives = 373/433 (86%), Gaps = 1/433 (0%) Frame = +2 Query: 11 MPDYLGTDQRXXXXXXXXXXXX-SLDEGDIALLKTYGAAPYSKEIKQCEDDNQNILKRVN 187 MPDYLG DQR +LDEGDIALLKTYG + YS++IKQ EDD Q +LK++N Sbjct: 1 MPDYLGADQRKTKEDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKIN 60 Query: 188 ELAGVKESDTGXXXXXXXXXXXXKVCLSSEHPLQVARCTKIINADSEEPKYIINVKQFAK 367 EL G+KESDTG K L SE PLQVARCTKIINADSE+PKYIINVKQFAK Sbjct: 61 ELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK 120 Query: 368 FVVDLAETVAPTDIEEGMRVGVDRTKYQIHIPLPPKIDPSVTMMQVEEKPDVTYSDVGGC 547 FVVDL++ VAPTDIEEGMRVGVDR KYQIHIPLPPKIDP+VTMMQVEEKPDVTYSDVGGC Sbjct: 121 FVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGC 180 Query: 548 KEQIEKLREVVEMPMLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRV 727 KEQIEKLREVVE P+LHPE+FVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFI V Sbjct: 181 KEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPV 240 Query: 728 IGSELVQKYVGEGARMVRELFELARSKKACIIFFDEIXXXXXXXXXXXXXXXNEVQRTML 907 IGSELVQKYVGEGARMVRELFE+AR+KKAC+IFFDEI NEVQRTML Sbjct: 241 IGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTML 300 Query: 908 ELINQLDGFDPRGNIKVLMATNRPDTLDPALVRPGRLDRKVEFGLPDLDGRTQIFKIHAR 1087 ELINQLDGFDPRGNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDL+GRT IFKIHAR Sbjct: 301 ELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHAR 360 Query: 1088 SMSVEKDIRYELLSRLCPNSTGAEIRSVCTEAGMFAIRSRRKMATEKDFLDAVTKVIKGC 1267 SMSVE+DIR+ELL+RLCPNSTGAEIRSVCTEAGMFAIR+RRK+ATEKDFL+AV KVIK Sbjct: 361 SMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSY 420 Query: 1268 AKFSATPRYMTYN 1306 AKFSATPRYMTYN Sbjct: 421 AKFSATPRYMTYN 433
>sp|Q18787|PRS7_CAEEL Probable 26S protease regulatory subunit 7 Length = 435 Score = 651 bits (1679), Expect = 0.0 Identities = 324/435 (74%), Positives = 364/435 (83%), Gaps = 3/435 (0%) Frame = +2 Query: 11 MPDYLGTDQRXXXXXXXXXXXXS---LDEGDIALLKTYGAAPYSKEIKQCEDDNQNILKR 181 MPD+LG D R + LDEGDIA+LK YG PY++++K + D +N LK+ Sbjct: 1 MPDHLGDDMRKTKKDDTKEEEKNFQALDEGDIAVLKRYGQGPYAEQLKTLDADIENCLKK 60 Query: 182 VNELAGVKESDTGXXXXXXXXXXXXKVCLSSEHPLQVARCTKIINADSEEPKYIINVKQF 361 VNEL+GVKESDTG K + E PLQVARCTKII +D +P+Y+INVKQF Sbjct: 61 VNELSGVKESDTGLAPPALWDIAADKQAMQQEQPLQVARCTKIITSDKHDPRYLINVKQF 120 Query: 362 AKFVVDLAETVAPTDIEEGMRVGVDRTKYQIHIPLPPKIDPSVTMMQVEEKPDVTYSDVG 541 AKFVVDLA++VAPTDIEEGMRVGVDR KYQIH+PLP KIDP+VTMMQVEEKPDVTYSDVG Sbjct: 121 AKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVG 180 Query: 542 GCKEQIEKLREVVEMPMLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFI 721 GCK+QIEKLREVVE P+LHPE++VNLGIEPPKGVLL+GPPGTGKTLCARAVANRTDACFI Sbjct: 181 GCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFI 240 Query: 722 RVIGSELVQKYVGEGARMVRELFELARSKKACIIFFDEIXXXXXXXXXXXXXXXNEVQRT 901 RVIGSELVQKYVGEGARMVRELFE+AR+KKAC+IFFDEI NEVQRT Sbjct: 241 RVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRT 300 Query: 902 MLELINQLDGFDPRGNIKVLMATNRPDTLDPALVRPGRLDRKVEFGLPDLDGRTQIFKIH 1081 MLELINQLDGFDPRGNIKVLMATNRPDTLDPAL+RPGRLDRKVEF LPDL GR I KIH Sbjct: 301 MLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIH 360 Query: 1082 ARSMSVEKDIRYELLSRLCPNSTGAEIRSVCTEAGMFAIRSRRKMATEKDFLDAVTKVIK 1261 A+ MSVE+DIRY+LL+RLCPNSTGAEIRSVCTEAGMFAIR+RRK+ATEKDFL+A+ KV+K Sbjct: 361 AKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAINKVVK 420 Query: 1262 GCAKFSATPRYMTYN 1306 G AKFSATPRY+T+N Sbjct: 421 GYAKFSATPRYLTHN 435
>sp|O64982|PRS7_PRUPE 26S protease regulatory subunit 7 (26S proteasome subunit 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 425 Score = 625 bits (1612), Expect = e-179 Identities = 309/409 (75%), Positives = 345/409 (84%) Frame = +2 Query: 80 LDEGDIALLKTYGAAPYSKEIKQCEDDNQNILKRVNELAGVKESDTGXXXXXXXXXXXXK 259 LDE DIALLKTYG PYS IK+ E + +++ K+VN+L G+KESDTG K Sbjct: 17 LDEDDIALLKTYGLGPYSTHIKKAEKEVKDLAKKVNDLCGIKESDTGLAAPSQWDLVSDK 76 Query: 260 VCLSSEHPLQVARCTKIINADSEEPKYIINVKQFAKFVVDLAETVAPTDIEEGMRVGVDR 439 + E PLQVARCTKIIN +SE+ KY+INVKQ AKFVV L + V+PTDIEEGMRVGVDR Sbjct: 77 QMMQEEQPLQVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDR 136 Query: 440 TKYQIHIPLPPKIDPSVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVEMPMLHPEKFVNL 619 KYQI IPLPPKIDPSVTMM VEEKPDVTY+DVGGCKEQIEK+REVVE+PMLHPEKFV L Sbjct: 137 NKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKL 196 Query: 620 GIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFELA 799 GI+PPKGVL +GPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF++A Sbjct: 197 GIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMA 256 Query: 800 RSKKACIIFFDEIXXXXXXXXXXXXXXXNEVQRTMLELINQLDGFDPRGNIKVLMATNRP 979 RSKKACI+FFDE+ NEVQRTMLE++NQLDGFD RGNIKVLMATNRP Sbjct: 257 RSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRP 316 Query: 980 DTLDPALVRPGRLDRKVEFGLPDLDGRTQIFKIHARSMSVEKDIRYELLSRLCPNSTGAE 1159 DTLDPAL+RPGRLDRKVEFGLPDL+ RTQIFKIH R+M+ E+DIR+ELL+RLCPNSTGA+ Sbjct: 317 DTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGAD 376 Query: 1160 IRSVCTEAGMFAIRSRRKMATEKDFLDAVTKVIKGCAKFSATPRYMTYN 1306 IRSVCTEAGM+AIR+RRK TEKDFLDAV KVIKG KFSATP+YM YN Sbjct: 377 IRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 425
>sp|Q41365|PRS7_SPIOL 26S protease regulatory subunit 7 (26S proteasome subunit 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 625 bits (1611), Expect = e-178 Identities = 309/409 (75%), Positives = 346/409 (84%) Frame = +2 Query: 80 LDEGDIALLKTYGAAPYSKEIKQCEDDNQNILKRVNELAGVKESDTGXXXXXXXXXXXXK 259 LDE DIALLKTYG PYS IK+ E + +++ K+VN+L G+KESDTG K Sbjct: 18 LDEDDIALLKTYGLGPYSASIKKVEKEIKDMSKKVNDLIGIKESDTGLAAPSQWDLVSDK 77 Query: 260 VCLSSEHPLQVARCTKIINADSEEPKYIINVKQFAKFVVDLAETVAPTDIEEGMRVGVDR 439 + E PLQVARCTKIIN ++E+ KY+INVKQ AKFVV L + V+PTDIEEGMRVGVDR Sbjct: 78 QMMQEEQPLQVARCTKIINPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDR 137 Query: 440 TKYQIHIPLPPKIDPSVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVEMPMLHPEKFVNL 619 KYQI IPLPPKIDPSVTMM VEEKPDVTY+DVGGCKEQIEK+REVVE+PMLHPEKFV L Sbjct: 138 NKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKL 197 Query: 620 GIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFELA 799 GI+PPKGVL +GPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF++A Sbjct: 198 GIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMA 257 Query: 800 RSKKACIIFFDEIXXXXXXXXXXXXXXXNEVQRTMLELINQLDGFDPRGNIKVLMATNRP 979 RSKKACI+FFDE+ NEVQRTMLE++NQLDGFD RGNIKVLMATNRP Sbjct: 258 RSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRP 317 Query: 980 DTLDPALVRPGRLDRKVEFGLPDLDGRTQIFKIHARSMSVEKDIRYELLSRLCPNSTGAE 1159 DTLDPAL+RPGRLDRKVEFGLPDL+GRTQIFKIH R+M+ E+DIR+ELL+RLCPNSTGA+ Sbjct: 318 DTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGAD 377 Query: 1160 IRSVCTEAGMFAIRSRRKMATEKDFLDAVTKVIKGCAKFSATPRYMTYN 1306 IRSVCTEAGM+AIR+RRK TEKDFLDAV KVIKG KFSATP+YM YN Sbjct: 378 IRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 426
>sp|Q9FXT9|PRS7_ORYSA 26S protease regulatory subunit 7 (26S proteasome subunit 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 622 bits (1603), Expect = e-178 Identities = 306/409 (74%), Positives = 345/409 (84%) Frame = +2 Query: 80 LDEGDIALLKTYGAAPYSKEIKQCEDDNQNILKRVNELAGVKESDTGXXXXXXXXXXXXK 259 LDE DIALLKTYG PYS IK+ E + + + K++N+L G+KESDTG K Sbjct: 18 LDEDDIALLKTYGLGPYSTSIKKVEKEIKEMAKKINDLCGIKESDTGLAPPSQWDLVSDK 77 Query: 260 VCLSSEHPLQVARCTKIINADSEEPKYIINVKQFAKFVVDLAETVAPTDIEEGMRVGVDR 439 + E PLQVARCTKII+ ++++ KY+INVKQ AKFVV L + V+PTDIEEGMRVGVDR Sbjct: 78 QMMQEEQPLQVARCTKIISPNTDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDR 137 Query: 440 TKYQIHIPLPPKIDPSVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVEMPMLHPEKFVNL 619 KYQI IPLPPKIDPSVTMM VEEKPDVTY+DVGGCKEQIEK+REVVE+PMLHPEKFV L Sbjct: 138 NKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKL 197 Query: 620 GIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFELA 799 GI+PPKGVL +GPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF++A Sbjct: 198 GIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMA 257 Query: 800 RSKKACIIFFDEIXXXXXXXXXXXXXXXNEVQRTMLELINQLDGFDPRGNIKVLMATNRP 979 RSKKACI+FFDE+ NEVQRTMLE++NQLDGFD RGNIKVLMATNRP Sbjct: 258 RSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRP 317 Query: 980 DTLDPALVRPGRLDRKVEFGLPDLDGRTQIFKIHARSMSVEKDIRYELLSRLCPNSTGAE 1159 DTLDPAL+RPGRLDRKVEFGLPDL+GRTQIFKIH R+M+ E+DIR+ELL+RLCPNSTGA+ Sbjct: 318 DTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGAD 377 Query: 1160 IRSVCTEAGMFAIRSRRKMATEKDFLDAVTKVIKGCAKFSATPRYMTYN 1306 IRSVCTEAGM+AIR+RRK TEKDFLDAV KVIKG KFSATP+YM YN Sbjct: 378 IRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 426
>sp|Q9SSB5|PRS7_ARATH 26S protease regulatory subunit 7 (26S proteasome subunit 7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory particle triple-A ATPase subunit 1a) Length = 426 Score = 621 bits (1601), Expect = e-177 Identities = 306/409 (74%), Positives = 345/409 (84%) Frame = +2 Query: 80 LDEGDIALLKTYGAAPYSKEIKQCEDDNQNILKRVNELAGVKESDTGXXXXXXXXXXXXK 259 LDE DIALLKTYG PYS IK+ E + +++ K++N+L G+KESDTG K Sbjct: 18 LDEDDIALLKTYGLGPYSAPIKKVEKEIKDLAKKINDLCGIKESDTGLAPPSQWDLVSDK 77 Query: 260 VCLSSEHPLQVARCTKIINADSEEPKYIINVKQFAKFVVDLAETVAPTDIEEGMRVGVDR 439 + E PLQVARCTKII+ ++E+ KY+INVKQ AKFVV L + V+PTDIEEGMRVGVDR Sbjct: 78 QMMQEEQPLQVARCTKIISPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDR 137 Query: 440 TKYQIHIPLPPKIDPSVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVEMPMLHPEKFVNL 619 KYQI IPLPPKIDPSVTMM VEEKPDVTY+DVGGCKEQIEK+REVVE+PMLHPEKFV L Sbjct: 138 NKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKL 197 Query: 620 GIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFELA 799 GI+PPKGVL +GPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF++A Sbjct: 198 GIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMA 257 Query: 800 RSKKACIIFFDEIXXXXXXXXXXXXXXXNEVQRTMLELINQLDGFDPRGNIKVLMATNRP 979 RSKKACI+FFDE+ NEVQRTMLE++NQLDGFD RGNIKVLMATNRP Sbjct: 258 RSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRP 317 Query: 980 DTLDPALVRPGRLDRKVEFGLPDLDGRTQIFKIHARSMSVEKDIRYELLSRLCPNSTGAE 1159 DTLDPAL+RPGRLDRKVEFGLPDL+ RTQIFKIH R+M+ E+DIR+ELL+RLCPNSTGA+ Sbjct: 318 DTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGAD 377 Query: 1160 IRSVCTEAGMFAIRSRRKMATEKDFLDAVTKVIKGCAKFSATPRYMTYN 1306 IRSVCTEAGM+AIR+RRK TEKDFLDAV KVIKG KFSATP+YM YN Sbjct: 378 IRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 426
>sp|P33299|PRS7_YEAST 26S protease regulatory subunit 7 homolog (CIM5 protein) (TAT-binding homolog 3) Length = 467 Score = 587 bits (1514), Expect = e-167 Identities = 300/439 (68%), Positives = 342/439 (77%), Gaps = 30/439 (6%) Frame = +2 Query: 80 LDEGDIALLKTYGAAPYSKEIKQCEDDNQNILKRVNELAGVKESDTGXXXXXXXXXXXXK 259 L EGDI +LK+YGAAPY+ ++KQ E+D ++I R+ E AGVKESDTG + Sbjct: 29 LTEGDIQVLKSYGAAPYAAKLKQTENDLKDIEARIKEKAGVKESDTGLAPSHLWDIMGDR 88 Query: 260 VCLSSEHPLQVARCTKII------------------------------NADSEEPKYIIN 349 L EHPLQVARCTKII + D E+ KY+IN Sbjct: 89 QRLGEEHPLQVARCTKIIKGNGESDETTTDNNNSGNSNSNSNQQSTDADEDDEDAKYVIN 148 Query: 350 VKQFAKFVVDLAETVAPTDIEEGMRVGVDRTKYQIHIPLPPKIDPSVTMMQVEEKPDVTY 529 +KQ AKFVV L E V+PTDIEEGMRVGVDR+KY I +PLPP+IDPSVTMM VEEKPDVTY Sbjct: 149 LKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEKPDVTY 208 Query: 530 SDVGGCKEQIEKLREVVEMPMLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTD 709 SDVGGCK+QIEKLREVVE+P+L PE+F LGI+PPKG+LL+GPPGTGKTLCARAVANRTD Sbjct: 209 SDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRTD 268 Query: 710 ACFIRVIGSELVQKYVGEGARMVRELFELARSKKACIIFFDEIXXXXXXXXXXXXXXXNE 889 A FIRVIGSELVQKYVGEGARMVRELFE+AR+KKACIIFFDEI NE Sbjct: 269 ATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDNE 328 Query: 890 VQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALVRPGRLDRKVEFGLPDLDGRTQI 1069 VQRTMLELI QLDGFDPRGNIKV+ ATNRP+TLDPAL+RPGR+DRKVEF LPDL+GR I Sbjct: 329 VQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANI 388 Query: 1070 FKIHARSMSVEKDIRYELLSRLCPNSTGAEIRSVCTEAGMFAIRSRRKMATEKDFLDAVT 1249 F+IH++SMSVE+ IR+EL+SRLCPNSTGAE+RSVCTEAGMFAIR+RRK+ATEKDFL AV Sbjct: 389 FRIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKDFLKAVD 448 Query: 1250 KVIKGCAKFSATPRYMTYN 1306 KVI G KFS+T RYM YN Sbjct: 449 KVISGYKKFSSTSRYMQYN 467
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 136,961,597
Number of Sequences: 369166
Number of extensions: 2678983
Number of successful extensions: 9924
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9653
length of database: 68,354,980
effective HSP length: 114
effective length of database: 47,295,190
effective search space used: 15654707890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Cluster detail
