Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_005_L14
(816 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P46471|PRS7_MOUSE 26S protease regulatory subunit 7 (MSS... 456 e-128
sp|P46472|PRS7_XENLA 26S protease regulatory subunit 7 (MSS... 456 e-128
sp|P35998|PRS7_HUMAN 26S protease regulatory subunit 7 (MSS... 456 e-128
sp|Q63347|PRS7_RAT 26S protease regulatory subunit 7 (MSS1 ... 453 e-127
sp|Q18787|PRS7_CAEEL Probable 26S protease regulatory subun... 443 e-124
sp|Q9FXT9|PRS7_ORYSA 26S protease regulatory subunit 7 (26S... 436 e-122
sp|Q41365|PRS7_SPIOL 26S protease regulatory subunit 7 (26S... 436 e-122
sp|Q9SSB5|PRS7_ARATH 26S protease regulatory subunit 7 (26S... 434 e-121
sp|O64982|PRS7_PRUPE 26S protease regulatory subunit 7 (26S... 434 e-121
sp|P33299|PRS7_YEAST 26S protease regulatory subunit 7 homo... 417 e-116
>sp|P46471|PRS7_MOUSE 26S protease regulatory subunit 7 (MSS1 protein)
Length = 433
Score = 456 bits (1173), Expect = e-128
Identities = 226/261 (86%), Positives = 240/261 (91%)
Frame = +2
Query: 2 TYSDVGGCKEQIEKLREVVEMPMLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANR 181
TYSDVGGCKEQIEKLREVVE P+LHPE+FVNLGIEPPKGVLLFGPPGTGKTLCARAVANR
Sbjct: 173 TYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANR 232
Query: 182 TDACFIRVIGSELVQKYVGEGARMVRELFELARSKKACIIFFDEIXXXXXXXXXXXXXXX 361
TDACFIRVIGSELVQKYVGEGARMVRELFE+AR+KKAC+IFFDEI
Sbjct: 233 TDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGD 292
Query: 362 NEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALVRPGRLDRKVEFGLPDLDGRT 541
NEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDL+GRT
Sbjct: 293 NEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRT 352
Query: 542 QIFKIHARSMSVEKDIRYELLSRLCPNSTGAEIRSVCTEAGMFAIRSRRKMATEKDFLDA 721
IFKIHARSMSVE+DIR+ELL+RLCPNSTGAEIRSVCTEAGMFAIR+RRK+ATEKDFL+A
Sbjct: 353 HIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEA 412
Query: 722 VTKVIKGCAKFSATPRYMTYN 784
V KVIK AKFSATPRYMTYN
Sbjct: 413 VNKVIKSYAKFSATPRYMTYN 433
>sp|P46472|PRS7_XENLA 26S protease regulatory subunit 7 (MSS1 protein)
Length = 433
Score = 456 bits (1173), Expect = e-128
Identities = 226/261 (86%), Positives = 240/261 (91%)
Frame = +2
Query: 2 TYSDVGGCKEQIEKLREVVEMPMLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANR 181
TYSDVGGCKEQIEKLREVVE P+LHPE+FVNLGIEPPKGVLLFGPPGTGKTLCARAVANR
Sbjct: 173 TYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANR 232
Query: 182 TDACFIRVIGSELVQKYVGEGARMVRELFELARSKKACIIFFDEIXXXXXXXXXXXXXXX 361
TDACFIRVIGSELVQKYVGEGARMVRELFE+AR+KKAC+IFFDEI
Sbjct: 233 TDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGD 292
Query: 362 NEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALVRPGRLDRKVEFGLPDLDGRT 541
NEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDL+GRT
Sbjct: 293 NEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRT 352
Query: 542 QIFKIHARSMSVEKDIRYELLSRLCPNSTGAEIRSVCTEAGMFAIRSRRKMATEKDFLDA 721
IFKIHARSMSVE+DIR+ELL+RLCPNSTGAEIRSVCTEAGMFAIR+RRK+ATEKDFL+A
Sbjct: 353 HIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEA 412
Query: 722 VTKVIKGCAKFSATPRYMTYN 784
V KVIK AKFSATPRYMTYN
Sbjct: 413 VNKVIKSYAKFSATPRYMTYN 433
>sp|P35998|PRS7_HUMAN 26S protease regulatory subunit 7 (MSS1 protein)
Length = 433
Score = 456 bits (1173), Expect = e-128
Identities = 226/261 (86%), Positives = 240/261 (91%)
Frame = +2
Query: 2 TYSDVGGCKEQIEKLREVVEMPMLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANR 181
TYSDVGGCKEQIEKLREVVE P+LHPE+FVNLGIEPPKGVLLFGPPGTGKTLCARAVANR
Sbjct: 173 TYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANR 232
Query: 182 TDACFIRVIGSELVQKYVGEGARMVRELFELARSKKACIIFFDEIXXXXXXXXXXXXXXX 361
TDACFIRVIGSELVQKYVGEGARMVRELFE+AR+KKAC+IFFDEI
Sbjct: 233 TDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGD 292
Query: 362 NEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALVRPGRLDRKVEFGLPDLDGRT 541
NEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDL+GRT
Sbjct: 293 NEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRT 352
Query: 542 QIFKIHARSMSVEKDIRYELLSRLCPNSTGAEIRSVCTEAGMFAIRSRRKMATEKDFLDA 721
IFKIHARSMSVE+DIR+ELL+RLCPNSTGAEIRSVCTEAGMFAIR+RRK+ATEKDFL+A
Sbjct: 353 HIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEA 412
Query: 722 VTKVIKGCAKFSATPRYMTYN 784
V KVIK AKFSATPRYMTYN
Sbjct: 413 VNKVIKSYAKFSATPRYMTYN 433
>sp|Q63347|PRS7_RAT 26S protease regulatory subunit 7 (MSS1 protein)
Length = 433
Score = 453 bits (1166), Expect = e-127
Identities = 225/261 (86%), Positives = 239/261 (91%)
Frame = +2
Query: 2 TYSDVGGCKEQIEKLREVVEMPMLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANR 181
TYSDVGGCKEQIEKLREVVE P+LHPE+FVNLGIEPPKGVLLFGPPGTGKTLCARAVANR
Sbjct: 173 TYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANR 232
Query: 182 TDACFIRVIGSELVQKYVGEGARMVRELFELARSKKACIIFFDEIXXXXXXXXXXXXXXX 361
TDACFI VIGSELVQKYVGEGARMVRELFE+AR+KKAC+IFFDEI
Sbjct: 233 TDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGD 292
Query: 362 NEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALVRPGRLDRKVEFGLPDLDGRT 541
NEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDL+GRT
Sbjct: 293 NEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRT 352
Query: 542 QIFKIHARSMSVEKDIRYELLSRLCPNSTGAEIRSVCTEAGMFAIRSRRKMATEKDFLDA 721
IFKIHARSMSVE+DIR+ELL+RLCPNSTGAEIRSVCTEAGMFAIR+RRK+ATEKDFL+A
Sbjct: 353 HIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEA 412
Query: 722 VTKVIKGCAKFSATPRYMTYN 784
V KVIK AKFSATPRYMTYN
Sbjct: 413 VNKVIKSYAKFSATPRYMTYN 433
>sp|Q18787|PRS7_CAEEL Probable 26S protease regulatory subunit 7
Length = 435
Score = 443 bits (1140), Expect = e-124
Identities = 217/261 (83%), Positives = 237/261 (90%)
Frame = +2
Query: 2 TYSDVGGCKEQIEKLREVVEMPMLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANR 181
TYSDVGGCK+QIEKLREVVE P+LHPE++VNLGIEPPKGVLL+GPPGTGKTLCARAVANR
Sbjct: 175 TYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANR 234
Query: 182 TDACFIRVIGSELVQKYVGEGARMVRELFELARSKKACIIFFDEIXXXXXXXXXXXXXXX 361
TDACFIRVIGSELVQKYVGEGARMVRELFE+AR+KKAC+IFFDEI
Sbjct: 235 TDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGD 294
Query: 362 NEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALVRPGRLDRKVEFGLPDLDGRT 541
NEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPAL+RPGRLDRKVEF LPDL GR
Sbjct: 295 NEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRA 354
Query: 542 QIFKIHARSMSVEKDIRYELLSRLCPNSTGAEIRSVCTEAGMFAIRSRRKMATEKDFLDA 721
I KIHA+ MSVE+DIRY+LL+RLCPNSTGAEIRSVCTEAGMFAIR+RRK+ATEKDFL+A
Sbjct: 355 HILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEA 414
Query: 722 VTKVIKGCAKFSATPRYMTYN 784
+ KV+KG AKFSATPRY+T+N
Sbjct: 415 INKVVKGYAKFSATPRYLTHN 435
>sp|Q9FXT9|PRS7_ORYSA 26S protease regulatory subunit 7 (26S proteasome subunit 7) (26S
proteasome AAA-ATPase subunit RPT1) (Regulatory particle
triple-A ATPase subunit 1)
Length = 426
Score = 436 bits (1121), Expect = e-122
Identities = 212/261 (81%), Positives = 234/261 (89%)
Frame = +2
Query: 2 TYSDVGGCKEQIEKLREVVEMPMLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANR 181
TY+DVGGCKEQIEK+REVVE+PMLHPEKFV LGI+PPKGVL +GPPGTGKTL ARAVANR
Sbjct: 166 TYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANR 225
Query: 182 TDACFIRVIGSELVQKYVGEGARMVRELFELARSKKACIIFFDEIXXXXXXXXXXXXXXX 361
TDACFIRVIGSELVQKYVGEGARMVRELF++ARSKKACI+FFDE+
Sbjct: 226 TDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGD 285
Query: 362 NEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALVRPGRLDRKVEFGLPDLDGRT 541
NEVQRTMLE++NQLDGFD RGNIKVLMATNRPDTLDPAL+RPGRLDRKVEFGLPDL+GRT
Sbjct: 286 NEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRT 345
Query: 542 QIFKIHARSMSVEKDIRYELLSRLCPNSTGAEIRSVCTEAGMFAIRSRRKMATEKDFLDA 721
QIFKIH R+M+ E+DIR+ELL+RLCPNSTGA+IRSVCTEAGM+AIR+RRK TEKDFLDA
Sbjct: 346 QIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDA 405
Query: 722 VTKVIKGCAKFSATPRYMTYN 784
V KVIKG KFSATP+YM YN
Sbjct: 406 VNKVIKGYQKFSATPKYMVYN 426
>sp|Q41365|PRS7_SPIOL 26S protease regulatory subunit 7 (26S proteasome subunit 7) (26S
proteasome AAA-ATPase subunit RPT1) (Regulatory particle
triple-A ATPase subunit 1)
Length = 426
Score = 436 bits (1121), Expect = e-122
Identities = 212/261 (81%), Positives = 234/261 (89%)
Frame = +2
Query: 2 TYSDVGGCKEQIEKLREVVEMPMLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANR 181
TY+DVGGCKEQIEK+REVVE+PMLHPEKFV LGI+PPKGVL +GPPGTGKTL ARAVANR
Sbjct: 166 TYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANR 225
Query: 182 TDACFIRVIGSELVQKYVGEGARMVRELFELARSKKACIIFFDEIXXXXXXXXXXXXXXX 361
TDACFIRVIGSELVQKYVGEGARMVRELF++ARSKKACI+FFDE+
Sbjct: 226 TDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGD 285
Query: 362 NEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALVRPGRLDRKVEFGLPDLDGRT 541
NEVQRTMLE++NQLDGFD RGNIKVLMATNRPDTLDPAL+RPGRLDRKVEFGLPDL+GRT
Sbjct: 286 NEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRT 345
Query: 542 QIFKIHARSMSVEKDIRYELLSRLCPNSTGAEIRSVCTEAGMFAIRSRRKMATEKDFLDA 721
QIFKIH R+M+ E+DIR+ELL+RLCPNSTGA+IRSVCTEAGM+AIR+RRK TEKDFLDA
Sbjct: 346 QIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDA 405
Query: 722 VTKVIKGCAKFSATPRYMTYN 784
V KVIKG KFSATP+YM YN
Sbjct: 406 VNKVIKGYQKFSATPKYMVYN 426
>sp|Q9SSB5|PRS7_ARATH 26S protease regulatory subunit 7 (26S proteasome subunit 7) (26S
proteasome AAA-ATPase subunit RPT1a) (Regulatory
particle triple-A ATPase subunit 1a)
Length = 426
Score = 434 bits (1115), Expect = e-121
Identities = 211/261 (80%), Positives = 233/261 (89%)
Frame = +2
Query: 2 TYSDVGGCKEQIEKLREVVEMPMLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANR 181
TY+DVGGCKEQIEK+REVVE+PMLHPEKFV LGI+PPKGVL +GPPGTGKTL ARAVANR
Sbjct: 166 TYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANR 225
Query: 182 TDACFIRVIGSELVQKYVGEGARMVRELFELARSKKACIIFFDEIXXXXXXXXXXXXXXX 361
TDACFIRVIGSELVQKYVGEGARMVRELF++ARSKKACI+FFDE+
Sbjct: 226 TDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGD 285
Query: 362 NEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALVRPGRLDRKVEFGLPDLDGRT 541
NEVQRTMLE++NQLDGFD RGNIKVLMATNRPDTLDPAL+RPGRLDRKVEFGLPDL+ RT
Sbjct: 286 NEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRT 345
Query: 542 QIFKIHARSMSVEKDIRYELLSRLCPNSTGAEIRSVCTEAGMFAIRSRRKMATEKDFLDA 721
QIFKIH R+M+ E+DIR+ELL+RLCPNSTGA+IRSVCTEAGM+AIR+RRK TEKDFLDA
Sbjct: 346 QIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDA 405
Query: 722 VTKVIKGCAKFSATPRYMTYN 784
V KVIKG KFSATP+YM YN
Sbjct: 406 VNKVIKGYQKFSATPKYMVYN 426
>sp|O64982|PRS7_PRUPE 26S protease regulatory subunit 7 (26S proteasome subunit 7) (26S
proteasome AAA-ATPase subunit RPT1) (Regulatory particle
triple-A ATPase subunit 1)
Length = 425
Score = 434 bits (1115), Expect = e-121
Identities = 211/261 (80%), Positives = 233/261 (89%)
Frame = +2
Query: 2 TYSDVGGCKEQIEKLREVVEMPMLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANR 181
TY+DVGGCKEQIEK+REVVE+PMLHPEKFV LGI+PPKGVL +GPPGTGKTL ARAVANR
Sbjct: 165 TYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANR 224
Query: 182 TDACFIRVIGSELVQKYVGEGARMVRELFELARSKKACIIFFDEIXXXXXXXXXXXXXXX 361
TDACFIRVIGSELVQKYVGEGARMVRELF++ARSKKACI+FFDE+
Sbjct: 225 TDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGD 284
Query: 362 NEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALVRPGRLDRKVEFGLPDLDGRT 541
NEVQRTMLE++NQLDGFD RGNIKVLMATNRPDTLDPAL+RPGRLDRKVEFGLPDL+ RT
Sbjct: 285 NEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRT 344
Query: 542 QIFKIHARSMSVEKDIRYELLSRLCPNSTGAEIRSVCTEAGMFAIRSRRKMATEKDFLDA 721
QIFKIH R+M+ E+DIR+ELL+RLCPNSTGA+IRSVCTEAGM+AIR+RRK TEKDFLDA
Sbjct: 345 QIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDA 404
Query: 722 VTKVIKGCAKFSATPRYMTYN 784
V KVIKG KFSATP+YM YN
Sbjct: 405 VNKVIKGYQKFSATPKYMVYN 425
>sp|P33299|PRS7_YEAST 26S protease regulatory subunit 7 homolog (CIM5 protein)
(TAT-binding homolog 3)
Length = 467
Score = 417 bits (1072), Expect = e-116
Identities = 205/261 (78%), Positives = 229/261 (87%)
Frame = +2
Query: 2 TYSDVGGCKEQIEKLREVVEMPMLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANR 181
TYSDVGGCK+QIEKLREVVE+P+L PE+F LGI+PPKG+LL+GPPGTGKTLCARAVANR
Sbjct: 207 TYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANR 266
Query: 182 TDACFIRVIGSELVQKYVGEGARMVRELFELARSKKACIIFFDEIXXXXXXXXXXXXXXX 361
TDA FIRVIGSELVQKYVGEGARMVRELFE+AR+KKACIIFFDEI
Sbjct: 267 TDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGD 326
Query: 362 NEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALVRPGRLDRKVEFGLPDLDGRT 541
NEVQRTMLELI QLDGFDPRGNIKV+ ATNRP+TLDPAL+RPGR+DRKVEF LPDL+GR
Sbjct: 327 NEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRA 386
Query: 542 QIFKIHARSMSVEKDIRYELLSRLCPNSTGAEIRSVCTEAGMFAIRSRRKMATEKDFLDA 721
IF+IH++SMSVE+ IR+EL+SRLCPNSTGAE+RSVCTEAGMFAIR+RRK+ATEKDFL A
Sbjct: 387 NIFRIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKDFLKA 446
Query: 722 VTKVIKGCAKFSATPRYMTYN 784
V KVI G KFS+T RYM YN
Sbjct: 447 VDKVISGYKKFSSTSRYMQYN 467
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,516,924
Number of Sequences: 369166
Number of extensions: 1689439
Number of successful extensions: 6996
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6753
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7811456130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)