Planaria EST Database

DrC_00267

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00267
         (1332 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8N122|RPTOR_HUMAN  Regulatory associated protein of mTOR...   156   1e-37
sp|Q8K4Q0|RPTOR_MOUSE  Regulatory associated protein of mTOR...   155   3e-37
sp|P38873|YHY6_YEAST  Hypothetical 175.8 kDa Trp-Asp repeats...   114   8e-25
sp|P87141|MIP1_SCHPO  WD-repeat protein mip1                      113   1e-24
sp|Q00808|HETE1_PODAN  Vegetatible incompatibility protein H...    48   6e-05
sp|O02482|UNC37_CAEEL  Transcription factor unc-37 (Uncoordi...    48   6e-05
sp|Q9C1X1|PWP2_SCHPO  Periodic tryptophan protein 2 homolog        47   1e-04
sp|P73595|Y1410_SYNY3  Hypothetical WD-repeat protein slr1410      45   4e-04
sp|Q10051|PRP19_CAEEL  PRP19/PSO4 homolog                          44   0.001
sp|Q6PE01|WDR57_MOUSE  WD-repeat protein 57                        41   0.007

>sp|Q8N122|RPTOR_HUMAN Regulatory associated protein of mTOR (Raptor) (P150 target of
            rapamycin (TOR)-scaffold protein)
          Length = 1335

 Score =  156 bits (394), Expect = 1e-37
 Identities = 86/286 (30%), Positives = 154/286 (53%), Gaps = 2/286 (0%)
 Frame = +2

Query: 401  HVIDSARYQDRNQRLKKQRNIKIEGAQNWKASLNSGGTQLS-QIFLQKIDSRPELLKFHP 577
            H ++S   ++R  R  +   ++ +  Q     +  G T+L  QIFL +    P ++KFHP
Sbjct: 978  HDLESQIRKEREWRFLRNSRVRRQAQQ----VIQKGITRLDDQIFLNRNPGVPSVVKFHP 1033

Query: 578  YLNYLAVADKSGVSLWNWEYGQRAQYMLSQSVSCKEDVEIDSPYAETSGYITSLEFLNAE 757
            +   +AVADK  +  W+WE G++  Y  + +                   +T++E+LN +
Sbjct: 1034 FTPCIAVADKDSICFWDWEKGEKLDYFHNGNPRYTR--------------VTAMEYLNGQ 1079

Query: 758  EDRGGLILVGTMDGRIKIWRNYLRDMGQDPDIVTAWIALPDQICSNRPSGLITHWSQVMG 937
            +    L+L  T DG I++W+N+  D+ ++P++VTAW  L D + + R +G++  W Q  G
Sbjct: 1080 DC--SLLLTATDDGAIRVWKNFA-DLEKNPEMVTAWQGLSDMLPTTRGAGMVVDWEQETG 1136

Query: 938  QLTISGDVKYIRLWDSVQEGKISDMNTNSESCVSTIDRSQDGRLIVAGFGDGHIKMFDIR 1117
             L  SGDV+ +R+WD+ +E K+ D+ T ++SCV+++       LIVAG GDG I+++D R
Sbjct: 1137 LLMSSGDVRIVRIWDTDREMKVQDIPTGADSCVTSLSCDSHRSLIVAGLGDGSIRVYDRR 1196

Query: 1118 APPNECVVNAGIGDVGWIHKIAYSDLTN-QVYSIGIDGELTTWSLR 1252
               +EC V        W+ K +     +  + S+ ++G++  +  R
Sbjct: 1197 MALSECRVMTYREHTAWVVKASLQKRPDGHIVSVSVNGDVRIFDPR 1242

>sp|Q8K4Q0|RPTOR_MOUSE Regulatory associated protein of mTOR (Raptor) (P150 target of
            rapamycin (TOR)-scaffold protein)
          Length = 1335

 Score =  155 bits (391), Expect = 3e-37
 Identities = 87/281 (30%), Positives = 152/281 (54%), Gaps = 3/281 (1%)
 Frame = +2

Query: 401  HVIDSARYQDRNQRLKKQRNIKIEGAQNWKASLNSGGTQLS-QIFLQKIDSRPELLKFHP 577
            H ++S   ++R  R  +   ++ +  Q     +  G T+L  QIFL +    P ++KFHP
Sbjct: 978  HDLESQIRKEREWRFLRNTRVRKQAQQ----VIQKGITRLDDQIFLNRNPGVPSVVKFHP 1033

Query: 578  YLNYLAVADKSGVSLWNWEYGQRAQYMLSQSVSCKEDVEIDSPYAETSGYITSLEFLNAE 757
            +   +AVADK  +  W+WE G++  Y  + +                   +T++E+LN +
Sbjct: 1034 FTPCIAVADKDSICFWDWEKGEKLDYFHNGNPRYTR--------------VTAMEYLNGQ 1079

Query: 758  EDRGGLILVGTMDGRIKIWRNYLRDMGQDPDIVTAWIALPDQICSNRPSGLITHWSQVMG 937
            +    L+L  T DG I++W+N+  D+ ++P++VTAW  L D + + R +G++  W Q  G
Sbjct: 1080 DC--SLLLTATDDGAIRVWKNFA-DLEKNPEMVTAWQGLSDMLPTTRGAGMVVDWEQETG 1136

Query: 938  QLTISGDVKYIRLWDSVQEGKISDMNTNSESCVSTIDRSQDGRLIVAGFGDGHIKMFDIR 1117
             L  SGDV+ +R+WD+ +E K+ D+ T ++SCV+++       LIVAG GDG I+++D R
Sbjct: 1137 LLMSSGDVRIVRIWDTDRETKVQDIPTGADSCVTSLSCDSHRSLIVAGLGDGSIRVYDRR 1196

Query: 1118 APPNECVVNAGIGDVGWIHKIAY--SDLTNQVYSIGIDGEL 1234
               +EC V        W+ K AY        + S+ ++G++
Sbjct: 1197 MALSECRVMTYREHTAWVVK-AYLQKHPEGHIVSVSVNGDV 1236

>sp|P38873|YHY6_YEAST Hypothetical 175.8 kDa Trp-Asp repeats containing protein in
            GND1-IKI1 intergenic region
          Length = 1541

 Score =  114 bits (284), Expect = 8e-25
 Identities = 87/297 (29%), Positives = 147/297 (49%), Gaps = 15/297 (5%)
 Frame = +2

Query: 434  NQRL-KKQRNIKIEGAQNWKASLNSGGTQLSQIFLQKIDSRPELLKFHPYLNYLAVAD-K 607
            N RL ++ RN  I      +  L+  G    ++      S+P+L+KF  + + L  AD +
Sbjct: 1155 NARLWRRNRNETIIQETQGEKKLSIYGNWSKKLISLNNKSQPKLMKFAQFEDQLITADDR 1214

Query: 608  SGVSLWNWEYGQRAQYMLSQSVSCKEDVEIDSPYAETSGYITSLEFLNAEEDRGGLILVG 787
            S +++++WE G+      +            +P+      +T L+ +N  ED   L+L G
Sbjct: 1215 STITVFDWEKGKTLSKFSN-----------GTPFGTK---VTDLKLIN--EDDSALLLTG 1258

Query: 788  TMDGRIKIWRNYLRDMGQDPD---IVTAWIALPDQICSNRPSGLITHWSQVMGQLTISGD 958
            + DG IKI+R+Y     QD D   IV+AW  L D + + R +GL+T W Q+ G L  +GD
Sbjct: 1259 SSDGVIKIYRDY-----QDVDTFKIVSAWRGLTDMLLTPRSTGLLTEWLQIRGSLLTTGD 1313

Query: 959  VKYIRLWDSVQEGKISDMNTNSESCVSTIDRSQ-DGRLIVAGFGDGHIKMFDIRAPPNEC 1135
            VK IR+WD+  E    D+   + S ++++   Q  G + VAGF DG ++++D R  P + 
Sbjct: 1314 VKVIRVWDAHTETVEVDIPAKTSSLITSLTADQLAGNIFVAGFADGSLRVYDRRLDPRDS 1373

Query: 1136 VV---NAGIGDVG-WIHKI-----AYSDLTNQVYSIGIDGELTTWSLRHRHAPKTFI 1279
            ++    AG    G WI+ +      Y +L     S   +G +  W +R     ++F+
Sbjct: 1374 MIRRWRAGNDKQGVWINNVHLQRGGYRELV----SGATNGVVELWDIRSEDPVESFV 1426

>sp|P87141|MIP1_SCHPO WD-repeat protein mip1
          Length = 1313

 Score =  113 bits (283), Expect = 1e-24
 Identities = 81/295 (27%), Positives = 145/295 (49%), Gaps = 4/295 (1%)
 Frame = +2

Query: 434  NQRL-KKQRNIKIEGAQNWKASLNSGGTQLSQIFLQKIDSRPELLKFHPYLNYL-AVADK 607
            NQRL ++ RN K+       A  ++ G    Q+        P  L FH + + L  + DK
Sbjct: 952  NQRLWRRNRNEKLIYRTRPLAEYSTNGRWNQQLMTFNNTIAPRKLMFHQFEDQLITLGDK 1011

Query: 608  SGVSLWNWEYGQRAQYMLSQSVSCKEDVEIDSPYAETSGYITSLEFLNAEEDRGGLILVG 787
              + +W+W   +R + + S   S           A  +  +T ++ LN  ED   L++ G
Sbjct: 1012 DIIQVWDW---RRNRCLNSFKTS-----------ASATTNVTDMQLLN--EDDVALLMTG 1055

Query: 788  TMDGRIKIWRNYLRDMGQDPDIVTAWIALPDQICSNRPSGLITHWSQVMGQLTISGDVKY 967
            + DG IK++R+Y     +  ++VT+W +L D +  +R + L+  W Q  G L ++GDV+ 
Sbjct: 1056 SSDGTIKLYRDY---ENEKVELVTSWNSLSDLVFGDRNASLLMSWQQNCGHLLVAGDVRV 1112

Query: 968  IRLWDSVQEGKISDMNTNSESCVSTIDRSQDG-RLIVAGFGDGHIKMFDIRAPPNECVVN 1144
            IR+WD+ +E   +++   S + ++++     G  +IVAGF DG ++++D R P  + + +
Sbjct: 1113 IRIWDASKEICYANLPVRSSNSITSLTSDLVGCNIIVAGFSDGVLRVYDKRLPARDSLTD 1172

Query: 1145 AGIGDVGWIHKI-AYSDLTNQVYSIGIDGELTTWSLRHRHAPKTFITPSRRPVSL 1306
                    I  +   S    ++ S   DGE+  W +R  H+ +TF T +    SL
Sbjct: 1173 VWKEHSSEIVNVEMQSSGMRELISASSDGEVKLWDIRMNHSLQTFSTDNSGLTSL 1227

>sp|Q00808|HETE1_PODAN Vegetatible incompatibility protein HET-E-1
          Length = 1356

 Score = 48.1 bits (113), Expect = 6e-05
 Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
 Frame = +2

Query: 935  GQLTISG-DVKYIRLWDSVQEGKISDMNTNSESCVSTIDRSQDGRLIVAGFGDGHIKMFD 1111
            GQ   SG D   I++WD+V       +  + +S V ++  S DG+ + +G  DG IK++D
Sbjct: 1063 GQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDS-VWSVAFSPDGQRVASGSIDGTIKIWD 1121

Query: 1112 IRAPPNECVVNAGIGDVGWIHKIAYSDLTNQVYSIGIDGELTTW 1243
              A    C      G  GW+H +A+S    +V S  IDG +  W
Sbjct: 1122 --AASGTCTQTLE-GHGGWVHSVAFSPDGQRVASGSIDGTIKIW 1162


 Score = 38.1 bits (87), Expect = 0.058
 Identities = 38/159 (23%), Positives = 63/159 (39%)
 Frame = +2

Query: 767  GGLILVGTMDGRIKIWRNYLRDMGQDPDIVTAWIALPDQICSNRPSGLITHWSQVMGQLT 946
            G  +  G++DG IKIW        Q  +    W+       +  P G      Q +   +
Sbjct: 1105 GQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWV----HSVAFSPDG------QRVASGS 1154

Query: 947  ISGDVKYIRLWDSVQEGKISDMNTNSESCVSTIDRSQDGRLIVAGFGDGHIKMFDIRAPP 1126
            I G +K   +WD+   G  +         V ++  S DG+ + +G  D  IK++D  +  
Sbjct: 1155 IDGTIK---IWDAA-SGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDKTIKIWDTAS-- 1208

Query: 1127 NECVVNAGIGDVGWIHKIAYSDLTNQVYSIGIDGELTTW 1243
              C      G  GW+  +A+S    +V S   D  +  W
Sbjct: 1209 GTCTQTLE-GHGGWVQSVAFSPDGQRVASGSSDNTIKIW 1246


 Score = 33.1 bits (74), Expect = 1.9
 Identities = 35/144 (24%), Positives = 57/144 (39%), Gaps = 1/144 (0%)
 Frame = +2

Query: 722  GYITSLEFLNAEEDRGGLILVGTMDGRIKIWRNYLRDMGQDPDIVTAWIALPDQICSNRP 901
            G++ S+ F       G  +  G++DG IKIW        Q  +    W+    Q  +  P
Sbjct: 1136 GWVHSVAF----SPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWV----QSVAFSP 1187

Query: 902  SGLITHWSQVMGQLTISGDV-KYIRLWDSVQEGKISDMNTNSESCVSTIDRSQDGRLIVA 1078
             G          Q   SG   K I++WD+   G  +         V ++  S DG+ + +
Sbjct: 1188 DG----------QRVASGSSDKTIKIWDTAS-GTCTQTLEGHGGWVQSVAFSPDGQRVAS 1236

Query: 1079 GFGDGHIKMFDIRAPPNECVVNAG 1150
            G  D  IK++D  +      +N G
Sbjct: 1237 GSSDNTIKIWDTASGTCTQTLNVG 1260

>sp|O02482|UNC37_CAEEL Transcription factor unc-37 (Uncoordinated protein 37)
          Length = 612

 Score = 48.1 bits (113), Expect = 6e-05
 Identities = 31/106 (29%), Positives = 51/106 (48%)
 Frame = +2

Query: 941  LTISGDVKYIRLWDSVQEGKISDMNTNSESCVSTIDRSQDGRLIVAGFGDGHIKMFDIRA 1120
            L I G+   + LWD   E K  D+ T+S++C + +  S D +L+ A   DG+I ++DI  
Sbjct: 389  LLIGGEASTVALWDLTTETKTLDLETDSQACYA-LAMSPDEKLLFACLADGNILIYDIH- 446

Query: 1121 PPNECVVNAGIGDVGWIHKIAYSDLTNQVYSIGIDGELTTWSLRHR 1258
              N+  V    G       +  S    +++S G+D  +  W L  R
Sbjct: 447  --NKVKVGTLPGHQDGASCLDLSKDGTKLWSGGLDNSVRCWDLAQR 490

>sp|Q9C1X1|PWP2_SCHPO Periodic tryptophan protein 2 homolog
          Length = 854

 Score = 47.4 bits (111), Expect = 1e-04
 Identities = 35/138 (25%), Positives = 61/138 (44%)
 Frame = +2

Query: 878  DQICSNRPSGLITHWSQVMGQLTISGDVKYIRLWDSVQEGKISDMNTNSESCVSTIDRSQ 1057
            D +  N     I   S  +GQL +         W+   E  +    ++ ++ +ST+  S 
Sbjct: 300  DTLTVNSTGDWIAIGSSKLGQLLV---------WEWQSESYVLKQQSHYDA-LSTLQYSS 349

Query: 1058 DGRLIVAGFGDGHIKMFDIRAPPNECVVNAGIGDVGWIHKIAYSDLTNQVYSIGIDGELT 1237
            DG+ I+ G  DG IK++D+ +    C+V         +  + +S   N ++S  +DG + 
Sbjct: 350  DGQRIITGADDGKIKVWDMNS--GFCIVTF-TQHTSAVSGLCFSKRGNVLFSSSLDGSVR 406

Query: 1238 TWSLRHRHAPKTFITPSR 1291
             W L      +TF  PSR
Sbjct: 407  AWDLIRYRNFRTFTAPSR 424


 Score = 38.1 bits (87), Expect = 0.058
 Identities = 82/445 (18%), Positives = 165/445 (37%), Gaps = 58/445 (13%)
 Frame = +2

Query: 143  YQFDFKDITTDFFNWSSKYF-------------TQPLLSFHKLTNQSNTSLVLNNENFKS 283
            Y   F DI +  ++  S++F               P+  FH      + + V++    K 
Sbjct: 142  YTGHFDDIVSISWSADSRFFISTSKDLTARLHSVDPIEGFHPCALTGHKNTVVSGFFSKD 201

Query: 284  LNSFQSINQSKSFDKISYKRLPNLN--ISDSISKNSSRRLMHVIDSARYQDRNQRLK--- 448
              +  ++++  +     Y  L      I +   +N +R  + +I    Y ++N +L+   
Sbjct: 202  QQTIYTVSKDGALFVWKYSPLFQAGEVIDEEAEENKTRTHIWLIKERHYFNQNSKLRCAA 261

Query: 449  --KQRNIKIEGAQNWKASLNS--GGTQLSQIFLQKIDSRPELLKFHPYLNYLAVADKSGV 616
                 N+ + G  +    +      T L Q+ + +  S  + L  +   +++A+      
Sbjct: 262  FHPTSNLLVVGFSSGLFGIYELPSFTMLYQLSITQ--SNIDTLTVNSTGDWIAIGSSKLG 319

Query: 617  SLWNWEYGQRAQYMLSQSVSCKEDVEIDSPYAETSGYITSLEFLNAEEDRGGLILVGTMD 796
             L  WE+ Q   Y+L Q                   +  +L  L    D G  I+ G  D
Sbjct: 320  QLLVWEW-QSESYVLKQQ-----------------SHYDALSTLQYSSD-GQRIITGADD 360

Query: 797  GRIKIWRNYLRDMGQDPDIVT-----------AWIALPDQICSNRPSGLITHWSQV---- 931
            G+IK+W     DM     IVT            +    + + S+   G +  W  +    
Sbjct: 361  GKIKVW-----DMNSGFCIVTFTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDLIRYRN 415

Query: 932  -------------------MGQLTISG--DVKYIRLWDSVQEGKISDMNTNSESCVSTID 1048
                                G++  +G  D   I +W SVQ G++ +     E  VS++ 
Sbjct: 416  FRTFTAPSRVQFSCIAVDPSGEIVCAGSQDSFEIFMW-SVQTGQLLETLAGHEGPVSSLS 474

Query: 1049 RSQDGRLIVAGFGDGHIKMFDIRAPPNECVVNAGIGDVGWIHKIAYSDLTNQVYSIGIDG 1228
             +  G L+ +G  D  ++++DI +      +   +     +  +A+     +V    +DG
Sbjct: 475  FNSSGSLLASGSWDKTVRIWDIFSRSG---IVEPLPIPSDVLSLAFHPDGKEVCVASLDG 531

Query: 1229 ELTTWSLRHRHAPKTFITPSRRPVS 1303
            +LT W++  +   +T +   R+ +S
Sbjct: 532  QLTFWNV--QEGKQTSLIDGRKDLS 554

>sp|P73595|Y1410_SYNY3 Hypothetical WD-repeat protein slr1410
          Length = 334

 Score = 45.4 bits (106), Expect = 4e-04
 Identities = 52/242 (21%), Positives = 97/242 (40%), Gaps = 28/242 (11%)
 Frame = +2

Query: 611  GVSLWNWEYGQRAQYMLSQSVS--CKEDVEIDSPYAETSGYITSLEFLNAEEDRGGLILV 784
            G ++    Y Q   Y+LS +     K          E +G   ++ F  A    G  I+ 
Sbjct: 58   GEAIIQIHYSQDGNYLLSTATDGLAKLWTADGELVREFAGKPVAMIFNGAFSRDGKAIIT 117

Query: 785  GTMDGRIKIWR---NYLRDMGQDPDIVTAWIALPDQ--ICSNRPSGLITHWSQVMGQL-- 943
               +G  +IW    N L ++      VT  + L D   + ++   G I  WS +   L  
Sbjct: 118  AGYNGVARIWDVQGNVLGEILGHTSAVTDVVFLSDDMGVVTSSDDGTIEGWSNIKEPLFT 177

Query: 944  -------------------TISGDVKYIRLWDSVQEGKISDMNTNSESCVSTIDRSQDGR 1066
                                ++ D+  I L +    GK+  +    +  ++ +D SQDG+
Sbjct: 178  VTRPGVSRNMDFNAQTNLIAVTQDIGEITLLNPA--GKVVRIIETDQGRLNDVDFSQDGK 235

Query: 1067 LIVAGFGDGHIKMFDIRAPPNECVVNAGIGDVGWIHKIAYSDLTNQVYSIGIDGELTTWS 1246
            L+V    DG  ++F++     + ++   + D GW+  +A +   N + ++  DG L  W+
Sbjct: 236  LLVTAGFDGTARVFNL---DGQEILKIDVLDDGWVTGVAINQ-DNLIATVSDDGILRVWN 291

Query: 1247 LR 1252
            L+
Sbjct: 292  LQ 293

>sp|Q10051|PRP19_CAEEL PRP19/PSO4 homolog
          Length = 492

 Score = 43.5 bits (101), Expect = 0.001
 Identities = 57/255 (22%), Positives = 99/255 (38%), Gaps = 31/255 (12%)
 Frame = +2

Query: 632  EYGQRAQYMLSQSVSCKEDVEIDSPYAETSGYITSLEFLNAEEDRGGLILVGTMDGRIKI 811
            E  QR + +       +E  E+    + T  + T    + A + +G L L G +D  + +
Sbjct: 176  ERKQRGKNLPEGLAKTEELAELKQTASHTGIHSTGTPGITALDIKGNLSLTGGIDKTVVL 235

Query: 812  WRNYLRDMGQD--------------PDIVTAWIALPDQIC-------SNRPSGLITHWSQ 928
            +      + Q               PD +TA  A  D          S+  + +  H + 
Sbjct: 236  YDYEKEQVMQTFKGHNKKINAVVLHPDNITAISASADSHIRVWSATDSSSKAIIDVHQAP 295

Query: 929  VMG-QLTISGDVKYIRLWDS------VQEGKIS---DMNTNSESCVSTIDRSQDGRLIVA 1078
            V    L  SGD       DS      ++ GK      +   S+  V +I+   DG +   
Sbjct: 296  VTDISLNASGDYILSASDDSYWAFSDIRSGKSLCKVSVEPGSQIAVHSIEFHPDGLIFGT 355

Query: 1079 GFGDGHIKMFDIRAPPNECVVNAGIGDVGWIHKIAYSDLTNQVYSIGIDGELTTWSLRHR 1258
            G  D  +K++D++   N+ V  A  G    +  IA+S+    + +   DGE+  W LR  
Sbjct: 356  GAADAVVKIWDLK---NQTVAAAFPGHTAAVRSIAFSENGYYLATGSEDGEVKLWDLRKL 412

Query: 1259 HAPKTFITPSRRPVS 1303
               KTF    ++P++
Sbjct: 413  KNLKTFANEEKQPIN 427

>sp|Q6PE01|WDR57_MOUSE WD-repeat protein 57
          Length = 358

 Score = 41.2 bits (95), Expect = 0.007
 Identities = 25/112 (22%), Positives = 52/112 (46%)
 Frame = +2

Query: 917  HWSQVMGQLTISGDVKYIRLWDSVQEGKISDMNTNSESCVSTIDRSQDGRLIVAGFGDGH 1096
            H++     L  +   K + +WDS    ++  +  ++    S     +  +L+  G  DG 
Sbjct: 117  HYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 176

Query: 1097 IKMFDIRAPPNECVVNAGIGDVGWIHKIAYSDLTNQVYSIGIDGELTTWSLR 1252
            +K++DIR    +  V     +   +  + ++D ++Q+ S GID ++  W LR
Sbjct: 177  VKLWDIR---KKAAVQT-FQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLR 224

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 156,450,639
Number of Sequences: 369166
Number of extensions: 3385199
Number of successful extensions: 9099
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9056
length of database: 68,354,980
effective HSP length: 114
effective length of database: 47,295,190
effective search space used: 15560117510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00267

  1. Dr_sW_007_H17
  2. Dr_sW_011_K08