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Planaria EST Database

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00202
         (874 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q13347|IF32_HUMAN  Eukaryotic translation initiation fact...   295   1e-79
sp|Q9QZD9|IF32_MOUSE  Eukaryotic translation initiation fact...   292   7e-79
sp|O02195|IF32_DROME  Eukaryotic translation initiation fact...   283   6e-76
sp|P79083|IF32_SCHPO  Eukaryotic translation initiation fact...   212   1e-54
sp|P40217|IF32_YEAST  Eukaryotic translation initiation fact...   202   8e-52
sp|Q38884|IF32_ARATH  Eukaryotic translation initiation fact...   194   2e-49
sp|Q9Z1Z2|STRAP_MOUSE  Serine-threonine kinase receptor-asso...    96   1e-19
sp|Q9Y3F4|STRAP_HUMAN  Serine-threonine kinase receptor-asso...    95   2e-19
sp|Q96DI7|WDR57_HUMAN  WD-repeat protein 57 (Prp8-binding pr...    55   3e-07
sp|Q00808|HETE1_PODAN  Vegetatible incompatibility protein H...    55   3e-07

>sp|Q13347|IF32_HUMAN Eukaryotic translation initiation factor 3 subunit 2 (eIF-3 beta)
           (eIF3 p36) (eIF3i) (TGF-beta receptor-interacting
           protein 1) (TRIP-1)
          Length = 325

 Score =  295 bits (754), Expect = 1e-79
 Identities = 136/266 (51%), Positives = 192/266 (72%)
 Frame = +2

Query: 2   GHKGAVWCLDIDWETRFLITGAADDTLNIWDVETGTLMNSIKTLTSVRSCQFDYSGNSIL 181
           GH GAVWC+D DW+T+ ++TG+AD++  +WD ETG  +  +KT ++VR+C FD+ GN I+
Sbjct: 50  GHTGAVWCVDADWDTKHVLTGSADNSCRLWDCETGKQLALLKTNSAVRTCGFDFGGNIIM 109

Query: 182 MTTDNIKNQKCEMMVFDIRDKSQIENSEPIWRVDCPSDSKITNCLWGPLDSVIYTSHDNG 361
            +TD     +C +  FD+RD SQI+N+EP  ++ C +DSKIT+ +WGPL   I   H++G
Sbjct: 110 FSTDKQMGYQCFVSFFDLRDPSQIDNNEPYMKIPC-NDSKITSAVWGPLGECIIAGHESG 168

Query: 362 QLCRFNMKAMAFDNVTKPHNMSITDMQCSRDNTLFITSSKDQTAKLYNAYDMEVIKTFTA 541
           +L +++ K+       K H+  I D+Q SRD T+F+T+SKD TAKL+++  +E  KTF  
Sbjct: 169 ELNQYSAKSGEVLVNVKEHSRQINDIQLSRDMTMFVTASKDNTAKLFDSTTLEHQKTFRT 228

Query: 542 DRPINSAAISPNREHVLLGGGQEAADVTKTAASKGKFEALFYHMIFENEITSVKGHFGPI 721
           +RP+NSAA+SPN +HV+LGGGQEA DVT T+   GKFEA F+H+ FE E   VKGHFGPI
Sbjct: 229 ERPVNSAALSPNYDHVVLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEFGRVKGHFGPI 288

Query: 722 NSVAFNPTGMGYASGGEEGLVRMYQF 799
           NSVAF+P G  Y+SGGE+G VR++ F
Sbjct: 289 NSVAFHPDGKSYSSGGEDGYVRIHYF 314

>sp|Q9QZD9|IF32_MOUSE Eukaryotic translation initiation factor 3 subunit 2 (eIF-3 beta)
           (eIF3 p36) (eIF3i) (TGF-beta receptor-interacting
           protein 1) (TRIP-1)
          Length = 325

 Score =  292 bits (748), Expect = 7e-79
 Identities = 134/266 (50%), Positives = 192/266 (72%)
 Frame = +2

Query: 2   GHKGAVWCLDIDWETRFLITGAADDTLNIWDVETGTLMNSIKTLTSVRSCQFDYSGNSIL 181
           GH GAVWC+D DW+T+ ++TG+AD++  +WD ETG  +  +KT ++VR+C FD+ GN I+
Sbjct: 50  GHTGAVWCVDADWDTKHVLTGSADNSCRLWDCETGKQLALLKTNSAVRTCGFDFGGNIIM 109

Query: 182 MTTDNIKNQKCEMMVFDIRDKSQIENSEPIWRVDCPSDSKITNCLWGPLDSVIYTSHDNG 361
            +TD     +C +  FD+RD SQI+++EP  ++ C +DSKIT+ +WGPL   +   H++G
Sbjct: 110 FSTDKQMGYQCFVSFFDLRDPSQIDSNEPYMKIPC-NDSKITSAVWGPLGECVIAGHESG 168

Query: 362 QLCRFNMKAMAFDNVTKPHNMSITDMQCSRDNTLFITSSKDQTAKLYNAYDMEVIKTFTA 541
           +L +++ K+       K H+  I D+Q SRD T+F+T+SKD TAKL+++  +E  KTF  
Sbjct: 169 ELNQYSAKSGEVLVNVKEHSRQINDIQLSRDMTMFVTASKDNTAKLFDSTTLEHQKTFRT 228

Query: 542 DRPINSAAISPNREHVLLGGGQEAADVTKTAASKGKFEALFYHMIFENEITSVKGHFGPI 721
           +RP+NSAA+SPN +HV+LGGGQEA DVT T+   GKFEA F+H+ FE E   VKGHFGPI
Sbjct: 229 ERPVNSAALSPNYDHVVLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEFGRVKGHFGPI 288

Query: 722 NSVAFNPTGMGYASGGEEGLVRMYQF 799
           NSVAF+P G  Y+SGGE+G VR++ F
Sbjct: 289 NSVAFHPDGKSYSSGGEDGYVRIHYF 314

>sp|O02195|IF32_DROME Eukaryotic translation initiation factor 3 subunit 2 (eIF-3 beta)
           (eIF3i) (TRIP-1 homolog)
          Length = 326

 Score =  283 bits (723), Expect = 6e-76
 Identities = 135/268 (50%), Positives = 186/268 (69%), Gaps = 2/268 (0%)
 Frame = +2

Query: 2   GHKGAVWCLDIDWETRFLITGAADDTLNIWDVETGTLMNSIKTLTSVRSCQFDYSGNSIL 181
           GH+GAVWCLD+DWE+R LITGA D T  IWDVE GT++ SI T +SVR+  F +SGN   
Sbjct: 50  GHQGAVWCLDVDWESRKLITGAGDMTAKIWDVEYGTVIASIPTKSSVRTSNFSFSGNQAA 109

Query: 182 MTTDNIKNQKCEMMVFDIRDK-SQIENSEPIWRVDCPSDSKITNCLWGPLDSVIYTSHDN 358
            +TD    Q CE+ + D+R+  S +   EP  R+   ++SKIT+ LWGPLD  I T HDN
Sbjct: 110 YSTDKAMGQSCELFLIDVRNADSSLSEQEPTLRIPM-TESKITSMLWGPLDETIITGHDN 168

Query: 359 GQLCRFNM-KAMAFDNVTKPHNMSITDMQCSRDNTLFITSSKDQTAKLYNAYDMEVIKTF 535
           G +  +++ K     +    H+  I DMQ S+D T+F+T+SKD TAKL+++  +  +KT+
Sbjct: 169 GNIAIWDIRKGQKVVDSGTDHSAGINDMQLSKDGTMFVTASKDTTAKLFDSESLMCLKTY 228

Query: 536 TADRPINSAAISPNREHVLLGGGQEAADVTKTAASKGKFEALFYHMIFENEITSVKGHFG 715
             +RP+NSAAISP  +HV+LGGGQ+A +VT T+   GKF++ F+H+I+E E   +KGHFG
Sbjct: 229 KTERPVNSAAISPIMDHVVLGGGQDAMEVTTTSTKAGKFDSRFFHLIYEEEFARLKGHFG 288

Query: 716 PINSVAFNPTGMGYASGGEEGLVRMYQF 799
           PINS+AF+P G  YASGGE+G VR+  F
Sbjct: 289 PINSLAFHPDGKSYASGGEDGFVRVQTF 316

>sp|P79083|IF32_SCHPO Eukaryotic translation initiation factor 3 39 kDa subunit (eIF3
           p39) (Translation initiation factor eIF3, p39 subunit)
           (Suppressor of uncontrolled mitosis 1)
          Length = 328

 Score =  212 bits (539), Expect = 1e-54
 Identities = 111/268 (41%), Positives = 160/268 (59%), Gaps = 2/268 (0%)
 Frame = +2

Query: 2   GHKGAVWCLDIDWETRFLITGAADDTLNIWDVETGTLMNSIKTLTSVRSCQFDYSGNSIL 181
           GH GA+W  DI+  +  +++GAAD+T+ +WDV+TG  +   +  T+V+  +F+     IL
Sbjct: 50  GHTGAIWTCDINKSSTLMVSGAADNTMRLWDVKTGKQLYKWEFPTAVKRVEFNEDDTRIL 109

Query: 182 MTTDNIKNQKCEMMVFDIRDKSQIENSEPIWRVDCPSDSKITNCLWGPLDSVIYTSHDNG 361
             T+        + VF +        +E    V    +SK T   W  L   ++T H++G
Sbjct: 110 AVTEERMGYAGTVTVFRVPISESDAAAETPLYVITTRESKATVAGWSYLSKFLFTGHEDG 169

Query: 362 QLCRFNMKAMAFDNVTKPHNM--SITDMQCSRDNTLFITSSKDQTAKLYNAYDMEVIKTF 535
            + R++     F    + HN   +ITD+Q   D T FITS KD TAK  +    EVIKT+
Sbjct: 170 SVSRYDAITGEFVESKQVHNSGSTITDLQFYPDRTYFITSCKDTTAKAIDVDSFEVIKTY 229

Query: 536 TADRPINSAAISPNREHVLLGGGQEAADVTKTAASKGKFEALFYHMIFENEITSVKGHFG 715
             D P+N+++ +P ++ V+LGGGQEA DVT TAA +GKFEA FYH I E E+  VKGHFG
Sbjct: 230 LTDTPLNTSSFTPVQDFVILGGGQEARDVTTTAARQGKFEARFYHAILEEELGRVKGHFG 289

Query: 716 PINSVAFNPTGMGYASGGEEGLVRMYQF 799
           PIN++A +P G GYASGGE+G VR++ F
Sbjct: 290 PINTIAVHPKGTGYASGGEDGYVRVHFF 317

>sp|P40217|IF32_YEAST Eukaryotic translation initiation factor 3 39 kDa subunit (eIF3
           p39) (Translation initiation factor eIF3, p39 subunit)
          Length = 347

 Score =  202 bits (515), Expect = 8e-52
 Identities = 105/273 (38%), Positives = 163/273 (59%), Gaps = 7/273 (2%)
 Frame = +2

Query: 2   GHKGAVWCLDIDWETRFLITGAADDTLNIWDVETGTLMNSIKTLTSVRSCQFDYSGNSIL 181
           GH G +W +D+D  T++ +TG+AD ++ +WDV  G  + + K+   V+  +F   GN  L
Sbjct: 50  GHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFL 109

Query: 182 MTTDNIKNQKCEMMVFDI-RDKSQIE----NSEPIWRVDCPSD-SKITNCLWGPLDSVIY 343
              DN+      + +++I RD +  E    + EPI ++         T   W      I 
Sbjct: 110 AILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYII 169

Query: 344 TSHDNGQLCRFNMKA-MAFDNVTKPHNMSITDMQCSRDNTLFITSSKDQTAKLYNAYDME 520
             H +G++ ++++     + +    H  SI+DMQ S D T FITSS+D  + L +   ++
Sbjct: 170 AGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQ 229

Query: 521 VIKTFTADRPINSAAISPNREHVLLGGGQEAADVTKTAASKGKFEALFYHMIFENEITSV 700
           V+K +  D P+N+A I+P +E ++LGGGQEA DVT T+A++GKFEA FYH IFE EI  V
Sbjct: 230 VLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRV 289

Query: 701 KGHFGPINSVAFNPTGMGYASGGEEGLVRMYQF 799
           +GHFGP+N+VA +P G  YASGGE+G +R++ F
Sbjct: 290 QGHFGPLNTVAISPQGTSYASGGEDGFIRLHHF 322

>sp|Q38884|IF32_ARATH Eukaryotic translation initiation factor 3 subunit 2 (eIF-3 beta)
           (eIF3 p36) (eIF3i) (TGF-beta receptor interacting
           protein 1) (TRIP-1)
          Length = 328

 Score =  194 bits (494), Expect = 2e-49
 Identities = 101/270 (37%), Positives = 160/270 (59%), Gaps = 4/270 (1%)
 Frame = +2

Query: 2   GHKGAVWCLDIDWETRFLITGAADDTLNIWDVETGTLMNSIKTLTSVRSCQFDYSGNSIL 181
           GH GAVWC D+  ++  LITG+AD T  +WDV++G  + + K     RS  F       +
Sbjct: 50  GHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAV 109

Query: 182 MTTDNIKNQKCEMMVFDIRDKSQIENSEPIWRVDCPSDSK-ITNCLWGPLDSVIYTSHDN 358
           +TTD+  ++   + V  I +  + +++E +  + CP   K I   +WGPL+  I +  ++
Sbjct: 110 ITTDHFVDRTAAIHVKRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGED 169

Query: 359 GQLCRFNM---KAMAFDNVTKPHNMSITDMQCSRDNTLFITSSKDQTAKLYNAYDMEVIK 529
             +  ++    K +   +    H   IT +  + D++ F+T S D+TAKL++   + ++K
Sbjct: 170 KVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLK 229

Query: 530 TFTADRPINSAAISPNREHVLLGGGQEAADVTKTAASKGKFEALFYHMIFENEITSVKGH 709
           T+T   P+N+ ++SP   HV+LGGGQ+A+ VT T    GKFEA FY  I + EI  VKGH
Sbjct: 230 TYTTVVPVNAVSLSPLLNHVVLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGH 289

Query: 710 FGPINSVAFNPTGMGYASGGEEGLVRMYQF 799
           FGPIN++AFNP G  ++SGGE+G VR++ F
Sbjct: 290 FGPINALAFNPDGKSFSSGGEDGYVRLHHF 319

>sp|Q9Z1Z2|STRAP_MOUSE Serine-threonine kinase receptor-associated protein
           (UNR-interacting protein)
          Length = 351

 Score = 95.9 bits (237), Expect = 1e-19
 Identities = 75/265 (28%), Positives = 121/265 (45%)
 Frame = +2

Query: 2   GHKGAVWCLDIDWETRFLITGAADDTLNIWDVETGTLMNSIKTLTSVRSCQFDYSGNSIL 181
           GHKGAVW   ++ +     T AAD T  +WD  +G  + ++     V++  F    N +L
Sbjct: 57  GHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMTLAHKHIVKTVDFTQDSNYLL 116

Query: 182 MTTDNIKNQKCEMMVFDIRDKSQIENSEPIWRVDCPSDSKITNCLWGPLDSVIYTSHDNG 361
                   Q   + ++D+ +K + E  E          S I   LW   D  I ++ D  
Sbjct: 117 TG-----GQDKLLRIYDL-NKPEAEPKEISGHT-----SGIKKALWCSDDKQILSADD-- 163

Query: 362 QLCRFNMKAMAFDNVTKPHNMSITDMQCSRDNTLFITSSKDQTAKLYNAYDMEVIKTFTA 541
           +  R    A   +  +   NMS++ M+   +  + + +     A  ++A  +E IK+F A
Sbjct: 164 KTVRLWDHATMTEVKSLNFNMSVSSMEYIPEGEILVITYGRSIA-FHSAVSLEPIKSFEA 222

Query: 542 DRPINSAAISPNREHVLLGGGQEAADVTKTAASKGKFEALFYHMIFENEITSVKGHFGPI 721
              INSA++ P +E ++ GG                F+   Y      E+ S KGHFGPI
Sbjct: 223 PATINSASLHPEKEFLVAGGED--------------FKLYKYDYNSGEELESYKGHFGPI 268

Query: 722 NSVAFNPTGMGYASGGEEGLVRMYQ 796
           + V F+P G  YASG E+G +R++Q
Sbjct: 269 HCVRFSPDGELYASGSEDGTLRLWQ 293

>sp|Q9Y3F4|STRAP_HUMAN Serine-threonine kinase receptor-associated protein
           (UNR-interacting protein) (WD-40 repeat protein PT-WD)
           (MAP activator with WD repeats)
          Length = 350

 Score = 95.1 bits (235), Expect = 2e-19
 Identities = 74/265 (27%), Positives = 121/265 (45%)
 Frame = +2

Query: 2   GHKGAVWCLDIDWETRFLITGAADDTLNIWDVETGTLMNSIKTLTSVRSCQFDYSGNSIL 181
           GHKGAVW   ++ +     T AAD T  +WD  +G  + ++     V++  F    N +L
Sbjct: 57  GHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMTLAHKHIVKTVDFTQDSNYLL 116

Query: 182 MTTDNIKNQKCEMMVFDIRDKSQIENSEPIWRVDCPSDSKITNCLWGPLDSVIYTSHDNG 361
                   Q   + ++D+ +K + E  E          S I   LW   D  I ++ D  
Sbjct: 117 TG-----GQDKLLRIYDL-NKPEAEPKEISGHT-----SGIKKALWCSEDKQILSADD-- 163

Query: 362 QLCRFNMKAMAFDNVTKPHNMSITDMQCSRDNTLFITSSKDQTAKLYNAYDMEVIKTFTA 541
           +  R    A   +  +   NMS++ M+   +  + + +     A  ++A  ++ IK+F A
Sbjct: 164 KTVRLWDHATMTEVKSLNFNMSVSSMEYIPEGEILVITYGRSIA-FHSAVSLDPIKSFEA 222

Query: 542 DRPINSAAISPNREHVLLGGGQEAADVTKTAASKGKFEALFYHMIFENEITSVKGHFGPI 721
              INSA++ P +E ++ GG                F+   Y      E+ S KGHFGPI
Sbjct: 223 PATINSASLHPEKEFLVAGGED--------------FKLYKYDYNSGEELESYKGHFGPI 268

Query: 722 NSVAFNPTGMGYASGGEEGLVRMYQ 796
           + V F+P G  YASG E+G +R++Q
Sbjct: 269 HCVRFSPDGELYASGSEDGTLRLWQ 293

>sp|Q96DI7|WDR57_HUMAN WD-repeat protein 57 (Prp8-binding protein) (hPRP8BP) (U5
           snRNP-specific 40 kDa protein) (38 kDa splicing factor)
          Length = 357

 Score = 55.1 bits (131), Expect = 3e-07
 Identities = 57/257 (22%), Positives = 109/257 (42%), Gaps = 10/257 (3%)
 Frame = +2

Query: 2   GHKGAVWCLDIDWETRFLITGAADDTLNIWDVETGTLMNSIKTLTS-VRSCQFDYSGNSI 178
           GH GAV  L  + +   L + + D T+ +WD ETG  +  +K  TS V SC     G  +
Sbjct: 107 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL 166

Query: 179 LMTTDNIKNQKCEMMVFDIRDKSQIENSEPIWRVDCPSDSKITNCLWGPLDSVIYTSHDN 358
           + T  +    K    ++DIR K+ I+  +  ++V   + +  +       D +I    DN
Sbjct: 167 VCTGSDDGTVK----LWDIRKKAAIQTFQNTYQVLAVTFNDTS-------DQIISGGIDN 215

Query: 359 GQLCRFNMKAMAFDNVTKPHNMSITDMQCSRDNTLFITSSKDQTAKLYN----AYDMEVI 526
             +  ++++        + H  S+T +  S + +  ++++ D T ++++    A     +
Sbjct: 216 -DIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCV 274

Query: 527 KTFTA-----DRPINSAAISPNREHVLLGGGQEAADVTKTAASKGKFEALFYHMIFENEI 691
           K F       ++ +   + SP+   +  G       V  T + +     + Y        
Sbjct: 275 KIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRR-----ILY-------- 321

Query: 692 TSVKGHFGPINSVAFNP 742
             + GH G IN VAF+P
Sbjct: 322 -KLPGHAGSINEVAFHP 337

>sp|Q00808|HETE1_PODAN Vegetatible incompatibility protein HET-E-1
          Length = 1356

 Score = 55.1 bits (131), Expect = 3e-07
 Identities = 56/266 (21%), Positives = 104/266 (39%), Gaps = 2/266 (0%)
 Frame = +2

Query: 2    GHKGAVWCLDIDWETRFLITGAADDTLNIWDVETGTLMNSIKTLTS-VRSCQFDYSGNSI 178
            GH G+VW +    + + + +G+ D T+ IWD  +GT   +++     V+S  F   G  +
Sbjct: 1007 GHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRV 1066

Query: 179  LMTTDNIKNQKCEMMVFDIRDKSQIENSEPIWRVDCPSDSKITNCLWGPLDSVIYTSHDN 358
               +D+    K    V     ++   + + +W V    D +      G +D  I      
Sbjct: 1067 ASGSDD-HTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQ--RVASGSIDGTIKIWDAA 1123

Query: 359  GQLCRFNMKAMAFDNVTKPHNMSITDMQCSRDNTLFITSSKDQTAKLYNAYDMEVIKTFT 538
               C   ++          H   +  +  S D     + S D T K+++A      +T  
Sbjct: 1124 SGTCTQTLEG---------HGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLE 1174

Query: 539  ADRP-INSAAISPNREHVLLGGGQEAADVTKTAASKGKFEALFYHMIFENEITSVKGHFG 715
                 + S A SP+ + V  G   +   +  TA+                   +++GH G
Sbjct: 1175 GHGGWVQSVAFSPDGQRVASGSSDKTIKIWDTASG--------------TCTQTLEGHGG 1220

Query: 716  PINSVAFNPTGMGYASGGEEGLVRMY 793
             + SVAF+P G   ASG  +  ++++
Sbjct: 1221 WVQSVAFSPDGQRVASGSSDNTIKIW 1246

 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 48/266 (18%), Positives = 103/266 (38%), Gaps = 2/266 (0%)
 Frame = +2

Query: 2    GHKGAVWCLDIDWETRFLITGAADDTLNIWDVETGTLMNSIKTLTS-VRSCQFDYSGNSI 178
            GH G+VW +    +   + +G+ D T+ IWD  +GT   +++     V+S  F   G  +
Sbjct: 881  GHGGSVWSVAFSPDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRV 940

Query: 179  LMTTDNIKNQKCEMMVFDIRDKSQIENSEPIWRVDCPSDSKITNCLWGPLDSVIYTSHDN 358
               +D+       + ++D    +  +  E          S + +  + P    + +   +
Sbjct: 941  ASGSDD-----HTIKIWDAASGTCTQTLE-------GHGSSVLSVAFSPDGQRVASGSGD 988

Query: 359  GQLCRFNMKAMAFDNVTKPHNMSITDMQCSRDNTLFITSSKDQTAKLYNAYDMEVIKTFT 538
              +  ++  +       + H  S+  +  S D     + S D+T K+++       +T  
Sbjct: 989  KTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLE 1048

Query: 539  ADRP-INSAAISPNREHVLLGGGQEAADVTKTAASKGKFEALFYHMIFENEITSVKGHFG 715
                 + S   SP+ + V  G       +              +  +      +++GH  
Sbjct: 1049 GHGGWVQSVVFSPDGQRVASGSDDHTIKI--------------WDAVSGTCTQTLEGHGD 1094

Query: 716  PINSVAFNPTGMGYASGGEEGLVRMY 793
             + SVAF+P G   ASG  +G ++++
Sbjct: 1095 SVWSVAFSPDGQRVASGSIDGTIKIW 1120

 Score = 43.9 bits (102), Expect = 6e-04
 Identities = 37/176 (21%), Positives = 74/176 (42%), Gaps = 7/176 (3%)
 Frame = +2

Query: 287  PSDSKITNCLWGPLDSVI---YTSHDNGQLCRFNMKAMAFDNVTKP---HNMSITDMQCS 448
            P  +  +  ++ P DS+I   +   + G +   ++    ++  T+    H  S+  +  S
Sbjct: 791  PLQAYTSALVFAPTDSMIKKIFKKEEPGWISTISVVEAEWNACTQTLEGHGSSVLSVAFS 850

Query: 449  RDNTLFITSSKDQTAKLYNAYDMEVIKTFTADR-PINSAAISPNREHVLLGGGQEAADVT 625
             D     + S D+T K+++       +T       + S A SP+RE V  G   +   + 
Sbjct: 851  ADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRERVASGSDDKTIKIW 910

Query: 626  KTAASKGKFEALFYHMIFENEITSVKGHFGPINSVAFNPTGMGYASGGEEGLVRMY 793
              A+                   +++GH G + SVAF+P G   ASG ++  ++++
Sbjct: 911  DAASGTCT--------------QTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIW 952

 Score = 35.4 bits (80), Expect = 0.21
 Identities = 15/55 (27%), Positives = 30/55 (54%)
 Frame = +2

Query: 2    GHKGAVWCLDIDWETRFLITGAADDTLNIWDVETGTLMNSIKTLTSVRSCQFDYS 166
            GH G V  +    + + + +G++D+T+ IWD  +GT   ++   ++     FDY+
Sbjct: 1217 GHGGWVQSVAFSPDGQRVASGSSDNTIKIWDTASGTCTQTLNVGSTATCLSFDYT 1271

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,678,109
Number of Sequences: 369166
Number of extensions: 1788349
Number of successful extensions: 6381
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6036
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8646143400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

1. Dr_sW_006_A18
2. Dr_sW_014_O18