DrC_00161
- Cluster detail
- GO Category :
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_00161 (1107 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|P28812|Y3568_PSEAE Hypothetical protein PA3568 305 2e-82 sp|P77495|PRPE_ECOLI Propionate--CoA ligase (Propionyl-CoA ... 203 8e-52 sp|P55912|PRPE_SALTY Propionate--CoA ligase (Propionyl-CoA ... 202 2e-51 sp|Q758X0|ACS1_ASHGO Acetyl-coenzyme A synthetase 1 (Acetat... 178 2e-44 sp|Q01574|ACS1_YEAST Acetyl-coenzyme A synthetase 1 (Acetat... 177 5e-44 sp|O60011|ACS1_KLULA Acetyl-coenzyme A synthetase 1 (Acetat... 175 2e-43 sp|Q6FLU2|ACS1_CANGA Acetyl-coenzyme A synthetase 1 (Acetat... 173 7e-43 sp|O93730|ACSA_PYRAE Acetyl-coenzyme A synthetase (Acetate-... 173 9e-43 sp|Q6BS00|ACS2_DEBHA Acetyl-coenzyme A synthetase 2 (Acetat... 164 4e-40 sp|P36333|ACSA_PENCH Acetyl-coenzyme A synthetase (Acetate-... 162 1e-39
>sp|P28812|Y3568_PSEAE Hypothetical protein PA3568 Length = 628 Score = 305 bits (781), Expect = 2e-82 Identities = 156/323 (48%), Positives = 208/323 (64%) Frame = +2 Query: 2 CTTIIYEGKPVGTPDSSQYFRVLNWHNPVSLFVAPTALRAIRREDPQAIHGVKYRHPRFR 181 CTT+ YEGKPV TPD+ Y+RV+ H SLF APTA+RAIR+EDP +Y R Sbjct: 300 CTTVFYEGKPVRTPDAGAYWRVIEEHRVNSLFCAPTAIRAIRKEDPHGERVKRYDLGSLR 359 Query: 182 SLFLAGEHCDVDTLSWAKEIFKVPVLDHWWQTETGWPITCPAAGLETRADLVPPPGSAGR 361 LFLAGE D T W +E PV DHWWQTETGWP+T P G+ DL GS R Sbjct: 360 HLFLAGEKLDSSTQHWLEEHTGRPVHDHWWQTETGWPVTAPCIGIAGH-DL--RAGSTNR 416 Query: 362 PVPGYDVKVLDTNTGVQLGPNQLGRIVVKLPMPPGMASTLYNNDEMFYKIFFTKFPGYYD 541 VPGY V+VLD + G LG N+ G IV+ LP+PPG A TL+ + + + + +PGYY Sbjct: 417 AVPGYHVQVLD-DEGRPLGANRQGAIVIALPLPPGCAQTLWGDHPRYLQAYLGNYPGYYH 475 Query: 542 TMDAGMVTEFGHIMVMARDDDVLNIAGHRISSGALEEACLENPCVVECAVIGLDDQLKGQ 721 T D G + E G + +M R DDV+N++GHR+S+G +EE ++ V ECAVIG+ D+LKG Sbjct: 476 TGDGGYLDEDGFVYIMGRTDDVINVSGHRLSTGEMEERVAQHQAVAECAVIGVRDELKGH 535 Query: 722 VPLALLVPDTDTIKAPEEIVSDTIKIVRDRIGAVAGMRNAVVVHRLPKTRSGKISRNAIA 901 VPL L+V D A E++ + + +VR++IGA+A + VVV RLPKTRSGKI R + Sbjct: 536 VPLGLVVLKDDAGIAAEQLQRELVALVREQIGALACFQRVVVVKRLPKTRSGKILRAVLR 595 Query: 902 AMANGKPFKAPVTLEDPTVFDPI 970 +A+G+ + AP T++DPT+ I Sbjct: 596 KIADGEDYAAPSTIDDPTILGEI 618
>sp|P77495|PRPE_ECOLI Propionate--CoA ligase (Propionyl-CoA synthetase) Length = 628 Score = 203 bits (516), Expect = 8e-52 Identities = 120/332 (36%), Positives = 183/332 (55%), Gaps = 8/332 (2%) Frame = +2 Query: 8 TIIYEGKPVGTPDSSQYFRVLNWHNPVSLFVAPTALRAIRREDPQAIHGVKYRHPRFRSL 187 TI+YEG P PD ++ ++ + +F APTA+R +++ I K+ L Sbjct: 303 TIVYEGLPTW-PDCGVWWTIVEKYQVSRMFSAPTAIRVLKKFPTAEIR--KHDLSSLEVL 359 Query: 188 FLAGEHCDVDTLSWAKEIFKVPVLDHWWQTETGWPITCPAAGLETRADLVPPPGSAGRPV 367 +LAGE D T SW VPV+D++WQTE+GWPI A GL+ R + GS G P+ Sbjct: 360 YLAGEPLDEPTASWVSNTLDVPVIDNYWQTESGWPIMAIARGLDDRPTRL---GSPGVPM 416 Query: 368 PGYDVKVLDTNTGVQLGPNQLGRIVVKLPMPPGMASTLYNNDEMFYKIFFTKFPG-YYDT 544 GY+V++L+ TG G N+ G +VV+ P+PPG T++ +D F K +++ F Y T Sbjct: 417 YGYNVQLLNEVTGEPCGVNEKGMLVVEGPLPPGCIQTIWGDDGRFVKTYWSLFSRPVYAT 476 Query: 545 MDAGMVTEFGHIMVMARDDDVLNIAGHRISSGALEEACLENPCVVECAVIGLDDQLKGQV 724 D G+ G+ ++ R DDV+N+AGHR+ + +EE+ +P V E AV+G+ D LKGQV Sbjct: 477 FDWGIRDADGYHFILGRTDDVINVAGHRLGTREIEESISSHPGVAEVAVVGVKDALKGQV 536 Query: 725 PLALLVP-------DTDTIKAPEEIVSDTIKIVRDRIGAVAGMRNAVVVHRLPKTRSGKI 883 +A ++P D D + E+ + + +V +IG + V +LPKTRSGK+ Sbjct: 537 AVAFVIPKESDSLEDRDVAHSQEKAI---MALVDSQIGNFGRPAHVWFVSQLPKTRSGKM 593 Query: 884 SRNAIAAMANGKPFKAPVTLEDPTVFDPIYNA 979 R I A+ G+ T++DP D I A Sbjct: 594 LRRTIQAICEGRDPGDLTTIDDPASLDQIRQA 625
>sp|P55912|PRPE_SALTY Propionate--CoA ligase (Propionyl-CoA synthetase) Length = 628 Score = 202 bits (513), Expect = 2e-51 Identities = 118/329 (35%), Positives = 180/329 (54%), Gaps = 5/329 (1%) Frame = +2 Query: 8 TIIYEGKPVGTPDSSQYFRVLNWHNPVSLFVAPTALRAIRREDPQAIHGVKYRHPRFRSL 187 TI+YEG P PD +++++ + +F APTA+R +++ I + +L Sbjct: 303 TIVYEGLPT-YPDCGVWWKIVEKYQVNRMFSAPTAIRVLKKFPTAQIRN--HDLSSLEAL 359 Query: 188 FLAGEHCDVDTLSWAKEIFKVPVLDHWWQTETGWPITCPAAGLETRADLVPPPGSAGRPV 367 +LAGE D T SW E VPV+D++WQTE+GWPI A L+ R + GS G P+ Sbjct: 360 YLAGEPLDEPTASWVTETLGVPVIDNYWQTESGWPIMALARALDDRPSRL---GSPGVPM 416 Query: 368 PGYDVKVLDTNTGVQLGPNQLGRIVVKLPMPPGMASTLYNNDEMFYKIFFTKFPGY-YDT 544 GY+V++L+ TG G N+ G +V++ P+PPG T++ +D F K +++ F Y T Sbjct: 417 YGYNVQLLNEVTGEPCGINEKGMLVIEGPLPPGCIQTIWGDDARFVKTYWSLFNRQVYAT 476 Query: 545 MDAGMVTEFGHIMVMARDDDVLNIAGHRISSGALEEACLENPCVVECAVIGLDDQLKGQV 724 D G+ G+ ++ R DDV+NIAGHR+ + +EE+ P V E AV+G+ D LKGQV Sbjct: 477 FDWGIRDAEGYYFILGRTDDVINIAGHRLGTREIEESISSYPNVAEVAVVGIKDALKGQV 536 Query: 725 PLALLVPDTDTIKAPEEIVSD----TIKIVRDRIGAVAGMRNAVVVHRLPKTRSGKISRN 892 +A ++P A E D + +V ++IG + V +LPKTRSGK+ R Sbjct: 537 AVAFVIPKQSDTLADREAARDEENAIMALVDNQIGHFGRPAHVWFVSQLPKTRSGKMLRR 596 Query: 893 AIAAMANGKPFKAPVTLEDPTVFDPIYNA 979 I A+ G+ T++DP I A Sbjct: 597 TIQAICEGRDPGDLTTIDDPASLQQIRQA 625
>sp|Q758X0|ACS1_ASHGO Acetyl-coenzyme A synthetase 1 (Acetate--CoA ligase 1) (Acyl-activating enzyme 1) Length = 694 Score = 178 bits (452), Expect = 2e-44 Identities = 111/316 (35%), Positives = 165/316 (52%), Gaps = 10/316 (3%) Frame = +2 Query: 2 CTTIIYEGKPVGTPDSSQYFRVLNWHNPVSLFVAPTALRAIRREDPQAIHGVKYRHPRFR 181 CTT+++EG P P S+Y+ +++ ++ +VAPTALR ++R + G R R Sbjct: 362 CTTVVFEGTPA-YPSYSRYWDIIDKYSVTQFYVAPTALRLLKRAGDSYVDGYSLR--TLR 418 Query: 182 SLFLAGEHCDVDTLSWAKEIF---KVPVLDHWWQTETGWPITCPAAGLETRADLVPPPGS 352 SL GE + W + ++PV+D +WQTE+G + P AG T PGS Sbjct: 419 SLGTVGEPIAAEVWEWYYTVIGKREIPVIDTYWQTESGAHLVTPLAGGSTPMK----PGS 474 Query: 353 AGRPVPGYDVKVLDTNTGVQL-GPNQLGRIVVKLPMPPGMASTLYNNDEMFYKIFFTKFP 529 A P G D+ +LD TG +L GPN G + VK P P T++NN + + + + Sbjct: 475 ASFPFFGIDLAILDPQTGEELLGPNVEGVLAVKQPWP-SFTRTIWNNHDRYLDTYLNPYK 533 Query: 530 GYYDTMDAGMVTEFGHIMVMARDDDVLNIAGHRISSGALEEACLENPCVVECAVIGLDDQ 709 GYY D G I ++ R DDV+N++GHR+S+ +E A ++ V ECAV+G D+ Sbjct: 534 GYYFAGDGAARDSQGFIWILGRVDDVVNVSGHRLSTAEVEAAIIQESMVAECAVVGFADE 593 Query: 710 LKGQVPLALLVP------DTDTIKAPEEIVSDTIKIVRDRIGAVAGMRNAVVVHRLPKTR 871 L GQ A +V +T + + +EI I VR IG A + V+V LPKTR Sbjct: 594 LTGQAIAAFVVLKQKSSWNTASERELQEIKKHLILSVRRDIGPFAAPKLIVLVDDLPKTR 653 Query: 872 SGKISRNAIAAMANGK 919 SGKI R + + G+ Sbjct: 654 SGKIMRRILRKILAGE 669
>sp|Q01574|ACS1_YEAST Acetyl-coenzyme A synthetase 1 (Acetate--CoA ligase 1) (Acyl-activating enzyme 1) Length = 713 Score = 177 bits (449), Expect = 5e-44 Identities = 108/317 (34%), Positives = 163/317 (51%), Gaps = 11/317 (3%) Frame = +2 Query: 2 CTTIIYEGKPVGTPDSSQYFRVLNWHNPVSLFVAPTALRAIRREDPQAI--HGVKYRHPR 175 C T+++EG P P+ S+Y+ +++ H +VAPTALR ++R I H +K Sbjct: 381 CATLVFEGTPA-YPNYSRYWDIIDEHKVTQFYVAPTALRLLKRAGDSYIENHSLK----S 435 Query: 176 FRSLFLAGEHCDVDTLSWAKEIF---KVPVLDHWWQTETGWPITCPAAGLETRADLVPPP 346 R L GE + W E ++P++D +WQTE+G + P AG T P Sbjct: 436 LRCLGSVGEPIAAEVWEWYSEKIGKNEIPIVDTYWQTESGSHLVTPLAGGVTPMK----P 491 Query: 347 GSAGRPVPGYDVKVLDTNTGVQLGPNQLGRIVVKLPMPPGMASTLYNNDEMFYKIFFTKF 526 GSA P G D VLD NTG +L + ++ P A T++ N + + + + Sbjct: 492 GSASFPFFGIDAVVLDPNTGEELNTSHAEGVLAVKAAWPSFARTIWKNHDRYLDTYLNPY 551 Query: 527 PGYYDTMDAGMVTEFGHIMVMARDDDVLNIAGHRISSGALEEACLENPCVVECAVIGLDD 706 PGYY T D + G+I ++ R DDV+N++GHR+S+ +E A +E+P V ECAV+G +D Sbjct: 552 PGYYFTGDGAAKDKDGYIWILGRVDDVVNVSGHRLSTAEIEAAIIEDPIVAECAVVGFND 611 Query: 707 QLKGQVPLALLVP------DTDTIKAPEEIVSDTIKIVRDRIGAVAGMRNAVVVHRLPKT 868 L GQ A +V T T ++I + VR IG A + ++V LPKT Sbjct: 612 DLTGQAVAAFVVLKNKSSWSTATDDELQDIKKHLVFTVRKDIGPFAAPKLIILVDDLPKT 671 Query: 869 RSGKISRNAIAAMANGK 919 RSGKI R + + G+ Sbjct: 672 RSGKIMRRILRKILAGE 688
>sp|O60011|ACS1_KLULA Acetyl-coenzyme A synthetase 1 (Acetate--CoA ligase 1) (Acyl-activating enzyme 1) Length = 707 Score = 175 bits (444), Expect = 2e-43 Identities = 110/316 (34%), Positives = 167/316 (52%), Gaps = 10/316 (3%) Frame = +2 Query: 2 CTTIIYEGKPVGTPDSSQYFRVLNWHNPVSLFVAPTALRAIRREDPQAIHGVKYRHPRFR 181 CTT+++EG P P+ S+Y+ +++ + +VAPTALR ++R G + R Sbjct: 375 CTTLVFEGTPA-YPNFSRYWEIVDKYQVTQFYVAPTALRLLKRAGDSFTEGFSLKS--LR 431 Query: 182 SLFLAGEHCDVDTLSWAKEIF---KVPVLDHWWQTETGWPITCPAAGLETRADLVPPPGS 352 SL GE + W E ++P++D +WQTE+G + P AG T PG+ Sbjct: 432 SLGSVGEPIAAEVWEWYSEKIGKNELPIVDTYWQTESGSHLVTPLAGGATPMK----PGA 487 Query: 353 AGRPVPGYDVKVLDTNTGV-QLGPNQLGRIVVKLPMPPGMASTLYNNDEMFYKIFFTKFP 529 A P G D+ VLD TG+ Q G + G + +K P P A T++ N++ F + +P Sbjct: 488 AAFPFFGIDLAVLDPTTGIEQTGEHAEGVLAIKRPWP-SFARTIWKNNDRFLDTYLKPYP 546 Query: 530 GYYDTMDAGMVTEFGHIMVMARDDDVLNIAGHRISSGALEEACLENPCVVECAVIGLDDQ 709 GYY T D + G ++ R DDV+N++GHR+S+ +E A +E+ V ECAV+G +D+ Sbjct: 547 GYYFTGDGVARDKDGFFWILGRVDDVVNVSGHRLSTAEIEAAIIEDDMVAECAVVGFNDE 606 Query: 710 LKGQVPLALLV-PDTDTIKAPEEIVSDTIK-----IVRDRIGAVAGMRNAVVVHRLPKTR 871 L GQ A +V + ++ A E IK VR IG A + V+V LPKTR Sbjct: 607 LTGQAVAAFVVLKNKSSLTAASESELQDIKKHLIITVRKDIGPFAAPKLIVLVDDLPKTR 666 Query: 872 SGKISRNAIAAMANGK 919 SGKI R + + G+ Sbjct: 667 SGKIMRRILRKILAGE 682
>sp|Q6FLU2|ACS1_CANGA Acetyl-coenzyme A synthetase 1 (Acetate--CoA ligase 1) (Acyl-activating enzyme 1) Length = 704 Score = 173 bits (439), Expect = 7e-43 Identities = 110/316 (34%), Positives = 165/316 (52%), Gaps = 10/316 (3%) Frame = +2 Query: 2 CTTIIYEGKPVGTPDSSQYFRVLNWHNPVSLFVAPTALRAIRREDPQAIHGVKYRHPRFR 181 CTT+++EG P P+ S+Y+ +++ H +VAPTALR ++R I G + R Sbjct: 372 CTTLVFEGTPA-YPNFSRYWEIIDKHQVTQFYVAPTALRLLKRAGDSFIDGFSLKS--LR 428 Query: 182 SLFLAGEHCDVDTLSWAKEIF---KVPVLDHWWQTETGWPITCPAAGLETRADLVPPPGS 352 L GE + W + ++P++D +WQTE+G + P AG T PGS Sbjct: 429 CLGSVGEPIAAEVWEWYSDKIGKNEIPIVDTYWQTESGSHLVTPLAGGVTPMK----PGS 484 Query: 353 AGRPVPGYDVKVLDTNTGVQLGPNQL-GRIVVKLPMPPGMASTLYNNDEMFYKIFFTKFP 529 A P G + +LD TG ++ + G + +K P P A T++ N + F + + Sbjct: 485 ASLPFFGIETVILDPTTGEEINDSHAEGVLAIKRPWP-SFARTIWKNHDRFLDTYLNPYK 543 Query: 530 GYYDTMDAGMVTEFGHIMVMARDDDVLNIAGHRISSGALEEACLENPCVVECAVIGLDDQ 709 GYY T D + G+I ++ R DDV+N++GHR+S+ +E A +E+ V ECAV+G +D Sbjct: 544 GYYFTGDGAARDKDGYIWILGRVDDVVNVSGHRLSTAEIEAAIIEDRMVAECAVVGFNDD 603 Query: 710 LKGQVPLALLV-PDTDT-IKAPEEIVSD----TIKIVRDRIGAVAGMRNAVVVHRLPKTR 871 L GQ A +V D T A EE + D I VR IG A + V+V LPKTR Sbjct: 604 LTGQAVAAFVVLKDKSTWASASEEELQDIKKHLILTVRKDIGPFAAPKLIVLVDDLPKTR 663 Query: 872 SGKISRNAIAAMANGK 919 SGKI R + + G+ Sbjct: 664 SGKIMRRILRKILAGE 679
>sp|O93730|ACSA_PYRAE Acetyl-coenzyme A synthetase (Acetate--CoA ligase) (Acyl-activating enzyme) Length = 670 Score = 173 bits (438), Expect = 9e-43 Identities = 111/333 (33%), Positives = 173/333 (51%), Gaps = 4/333 (1%) Frame = +2 Query: 5 TTIIYEGKPVGTPDSSQYFRVLNWHNPVSLFVAPTALRAIRREDPQAIHGVKYRHPRFRS 184 T +IYEG P P +++ ++ + + +PTA+R R + K+ R Sbjct: 341 TEVIYEGAP-DYPQPDRWWSIIERYGVTIFYTSPTAIRMFMRYGEEWPR--KHDLSTLRI 397 Query: 185 LFLAGEHCDVDTLSWAKEIF---KVPVLDHWWQTETGWPITCPAAGLETRADLVP-PPGS 352 + GE + + WA + KV WW TETG + A GL LVP PG+ Sbjct: 398 IHSVGEPINPEAWRWAYRVLGNEKVAFGSTWWMTETGGIVISHAPGLY----LVPMKPGT 453 Query: 353 AGRPVPGYDVKVLDTNTGVQLGPNQLGRIVVKLPMPPGMASTLYNNDEMFYKIFFTKFPG 532 G P+PG++V V+D N G P G +V+K P P GM ++ + E + K ++++FPG Sbjct: 454 NGPPLPGFEVDVVDEN-GNPAPPGVKGYLVIKKPWP-GMLHGIWGDPERYIKTYWSRFPG 511 Query: 533 YYDTMDAGMVTEFGHIMVMARDDDVLNIAGHRISSGALEEACLENPCVVECAVIGLDDQL 712 + D + + G+I V+ R D+V+ +AGHR+ + LE A + +P V E AV+G+ D + Sbjct: 512 MFYAGDYAIKDKDGYIWVLGRADEVIKVAGHRLGTYELESALISHPAVAESAVVGVPDAI 571 Query: 713 KGQVPLALLVPDTDTIKAPEEIVSDTIKIVRDRIGAVAGMRNAVVVHRLPKTRSGKISRN 892 KG+VP+A +V + +E+ + + VR IG +A V +LPKTRSGKI R Sbjct: 572 KGEVPIAFVVL-KQGVAPSDELRKELREHVRRTIGPIAEPAQIFFVTKLPKTRSGKIMRR 630 Query: 893 AIAAMANGKPFKAPVTLEDPTVFDPIYNAFIQI 991 + A+A G P TLED T + A+ +I Sbjct: 631 LLKAVATGAPLGDVTTLEDETSVEEAKRAYEEI 663
>sp|Q6BS00|ACS2_DEBHA Acetyl-coenzyme A synthetase 2 (Acetate--CoA ligase 2) (Acyl-activating enzyme 2) Length = 679 Score = 164 bits (415), Expect = 4e-40 Identities = 103/317 (32%), Positives = 162/317 (51%), Gaps = 13/317 (4%) Frame = +2 Query: 8 TIIYEGKPVGTPDSSQYFRVLNWHNPVSLFVAPTALRAIRREDPQAIHGVKYRHPRFRSL 187 T+++EG P PD + ++++ H +VAPTALR +R+ Q I KY R+L Sbjct: 342 TVVFEGTPA-FPDYGRLWQIVEKHKATHFYVAPTALRLLRKSGEQEIE--KYDLSSLRTL 398 Query: 188 FLAGEHCDVDTLSWAKEIF---KVPVLDHWWQTETGWPITCPAAGLETRADLVP-PPGSA 355 GE D W E + V D +WQTE+G P AG+ VP PGSA Sbjct: 399 GSVGEPISPDIWEWYNEKVGKGQCHVTDTYWQTESGSHFIAPIAGV------VPNKPGSA 452 Query: 356 GRPVPGYDVKVLDTNTGVQLGPNQLGRIVVKLPMPPGMASTLYNNDEMFYKIFFTKFPGY 535 P G ++D +G+++ N + ++ P MA ++Y N + + +PGY Sbjct: 453 AVPFFGIQTCLIDPVSGIEIQGNDVEGVLAVKDTWPSMARSVYKNHTKYMDTYLNPYPGY 512 Query: 536 YDTMDAGMVTEFGHIMVMARDDDVLNIAGHRISSGALEEACLENPCVVECAVIGLDDQLK 715 Y T D G+ + R DDV+N++GHR+S+ +E A +E+ + E AV+G++D L Sbjct: 513 YFTGDGAARDHDGYYWIRGRVDDVVNVSGHRLSTAEIEAALIEHNAISEAAVVGMNDDLT 572 Query: 716 GQVPLAL------LVPDTDTIKAPEE---IVSDTIKIVRDRIGAVAGMRNAVVVHRLPKT 868 GQ +A L+ + ++PEE + + I VR +IG A ++ ++V LPKT Sbjct: 573 GQTVVAFVALKEHLIANLKADESPEEALKLKKEMILQVRTQIGPFAAPKSVIIVEDLPKT 632 Query: 869 RSGKISRNAIAAMANGK 919 RSGKI R + +A G+ Sbjct: 633 RSGKIMRRILRKIAAGE 649
>sp|P36333|ACSA_PENCH Acetyl-coenzyme A synthetase (Acetate--CoA ligase) (Acyl-activating enzyme) Length = 669 Score = 162 bits (411), Expect = 1e-39 Identities = 109/329 (33%), Positives = 164/329 (49%), Gaps = 6/329 (1%) Frame = +2 Query: 2 CTTIIYEGKPVGTPDSSQYFRVLNWHNPVSLFVAPTALRAIRREDPQAIHGVKYRHPRFR 181 C T+++E P P+ S+Y+ V++ H+ +VAPTALR ++R + IH ++ R Sbjct: 343 CATVVFESTPA-YPNFSRYWDVIDKHDVTQFYVAPTALRLLKRAGDEHIH---HKMHSLR 398 Query: 182 SLFLAGEHCDVDTLSWAKEIF---KVPVLDHWWQTETGWPITCPAAGLETRADLVPPPGS 352 L GE + W E + + D +WQTETG + P G+ PGS Sbjct: 399 ILGSVGEPIAAEVWKWYFECVGKEEAHICDTYWQTETGSHVITPLGGITPTK-----PGS 453 Query: 353 AGRPVPGYDVKVLDTNTGVQLGPNQL-GRIVVKLPMPPGMASTLYNNDEMFYKIFFTKFP 529 A P G + ++D +G ++ N + G + K P P MA T++ + + + + Sbjct: 454 ASLPFFGIEPAIIDPVSGEEIVGNDVEGVLAFKQPWP-SMARTVWGAHKRYMDTYLNVYK 512 Query: 530 GYYDTMDAGMVTEFGHIMVMARDDDVLNIAGHRISSGALEEACLENPCVVECAVIGLDDQ 709 GYY T D G+ + R DDV+N++GHR+S+ +E A LE+P V E AV+G+ D+ Sbjct: 513 GYYFTGDGAGRDHDGYYWIRGRVDDVVNVSGHRLSTAEIEAALLEHPSVAEAAVVGIADE 572 Query: 710 LKGQVPLALLVPDTDTIKAPEEIVSDTIKIVRDRIGAVAGMRNAVVVHRLPKTRSGKISR 889 L GQ A + K E+I D VR IG A + VV LPKTRSGKI R Sbjct: 573 LTGQAVNAFV--SLKEGKPTEQISKDLAMQVRKSIGPFAAPKAVFVVDDLPKTRSGKIMR 630 Query: 890 NAIAAMANGK--PFKAPVTLEDPTVFDPI 970 + + +G+ TL DP+V D I Sbjct: 631 RILRKILSGEEDSLGDTSTLSDPSVVDKI 659
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 136,649,188
Number of Sequences: 369166
Number of extensions: 3092779
Number of successful extensions: 8598
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8340
length of database: 68,354,980
effective HSP length: 112
effective length of database: 47,664,660
effective search space used: 12202152960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Cluster detail
