Planarian EST Database


Dr_sW_004_P21

BLASTX 2.2.12 [Aug-07-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dr_sW_004_P21
         (840 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P28812|Y3568_PSEAE  Hypothetical protein PA3568                261   2e-69
sp|P55912|PRPE_SALTY  Propionate--CoA ligase (Propionyl-CoA ...   176   7e-44
sp|P77495|PRPE_ECOLI  Propionate--CoA ligase (Propionyl-CoA ...   175   1e-43
sp|Q758X0|ACS1_ASHGO  Acetyl-coenzyme A synthetase 1 (Acetat...   157   3e-38
sp|Q01574|ACS1_YEAST  Acetyl-coenzyme A synthetase 1 (Acetat...   156   6e-38
sp|O60011|ACS1_KLULA  Acetyl-coenzyme A synthetase 1 (Acetat...   154   3e-37
sp|Q6FLU2|ACS1_CANGA  Acetyl-coenzyme A synthetase 1 (Acetat...   152   1e-36
sp|Q8NJN3|ACS2_CANAL  Acetyl-coenzyme A synthetase 2 (Acetat...   143   7e-34
sp|Q8KBY0|ACSA_CHLTE  Acetyl-coenzyme A synthetase (Acetate-...   141   2e-33
sp|Q6BS00|ACS2_DEBHA  Acetyl-coenzyme A synthetase 2 (Acetat...   139   1e-32
>sp|P28812|Y3568_PSEAE Hypothetical protein PA3568
          Length = 628

 Score =  261 bits (666), Expect = 2e-69
 Identities = 133/275 (48%), Positives = 176/275 (64%)
 Frame = +2

Query: 2    CTTIIYEGKPVGTPDSSQYFRVLNWHNPVSLFVAPTALRAIRREDPQAIHGVKYRHPRFR 181
            CTT+ YEGKPV TPD+  Y+RV+  H   SLF APTA+RAIR+EDP      +Y     R
Sbjct: 300  CTTVFYEGKPVRTPDAGAYWRVIEEHRVNSLFCAPTAIRAIRKEDPHGERVKRYDLGSLR 359

Query: 182  SLFLAGEHCDVDTLSWAKEIFKVPVLDHWWQTETGWPITCPAAGLETRADLVPPPGSAGR 361
             LFLAGE  D  T  W +E    PV DHWWQTETGWP+T P  G+    DL    GS  R
Sbjct: 360  HLFLAGEKLDSSTQHWLEEHTGRPVHDHWWQTETGWPVTAPCIGIAGH-DL--RAGSTNR 416

Query: 362  PVPGYDVKVLDTNTGVQLGPNQLGRIVVKLPMPPGMASTLYNNDEMFYKIFFTKFPGYYD 541
             VPGY V+VLD + G  LG N+ G IV+ LP+PPG A TL+ +   + + +   +PGYY 
Sbjct: 417  AVPGYHVQVLD-DEGRPLGANRQGAIVIALPLPPGCAQTLWGDHPRYLQAYLGNYPGYYH 475

Query: 542  TMDAGMVTEFGHIMVMARDDDVLNIAGHRISSGALEEACLENPCVVECAVIGLDDQLKGQ 721
            T D G + E G + +M R DDV+N++GHR+S+G +EE   ++  V ECAVIG+ D+LKG 
Sbjct: 476  TGDGGYLDEDGFVYIMGRTDDVINVSGHRLSTGEMEERVAQHQAVAECAVIGVRDELKGH 535

Query: 722  VPLALLVPDTDTIKAPEEIVSDTIKIVRDRIGAVA 826
            VPL L+V   D   A E++  + + +VR++IGA+A
Sbjct: 536  VPLGLVVLKDDAGIAAEQLQRELVALVREQIGALA 570
>sp|P55912|PRPE_SALTY Propionate--CoA ligase (Propionyl-CoA synthetase)
          Length = 628

 Score =  176 bits (446), Expect = 7e-44
 Identities = 97/261 (37%), Positives = 148/261 (56%), Gaps = 1/261 (0%)
 Frame = +2

Query: 8    TIIYEGKPVGTPDSSQYFRVLNWHNPVSLFVAPTALRAIRREDPQAIHGVKYRHPRFRSL 187
            TI+YEG P   PD   +++++  +    +F APTA+R +++     I    +      +L
Sbjct: 303  TIVYEGLPT-YPDCGVWWKIVEKYQVNRMFSAPTAIRVLKKFPTAQIRN--HDLSSLEAL 359

Query: 188  FLAGEHCDVDTLSWAKEIFKVPVLDHWWQTETGWPITCPAAGLETRADLVPPPGSAGRPV 367
            +LAGE  D  T SW  E   VPV+D++WQTE+GWPI   A  L+ R   +   GS G P+
Sbjct: 360  YLAGEPLDEPTASWVTETLGVPVIDNYWQTESGWPIMALARALDDRPSRL---GSPGVPM 416

Query: 368  PGYDVKVLDTNTGVQLGPNQLGRIVVKLPMPPGMASTLYNNDEMFYKIFFTKFPGY-YDT 544
             GY+V++L+  TG   G N+ G +V++ P+PPG   T++ +D  F K +++ F    Y T
Sbjct: 417  YGYNVQLLNEVTGEPCGINEKGMLVIEGPLPPGCIQTIWGDDARFVKTYWSLFNRQVYAT 476

Query: 545  MDAGMVTEFGHIMVMARDDDVLNIAGHRISSGALEEACLENPCVVECAVIGLDDQLKGQV 724
             D G+    G+  ++ R DDV+NIAGHR+ +  +EE+    P V E AV+G+ D LKGQV
Sbjct: 477  FDWGIRDAEGYYFILGRTDDVINIAGHRLGTREIEESISSYPNVAEVAVVGIKDALKGQV 536

Query: 725  PLALLVPDTDTIKAPEEIVSD 787
             +A ++P      A  E   D
Sbjct: 537  AVAFVIPKQSDTLADREAARD 557
>sp|P77495|PRPE_ECOLI Propionate--CoA ligase (Propionyl-CoA synthetase)
          Length = 628

 Score =  175 bits (444), Expect = 1e-43
 Identities = 96/254 (37%), Positives = 151/254 (59%), Gaps = 2/254 (0%)
 Frame = +2

Query: 8    TIIYEGKPVGTPDSSQYFRVLNWHNPVSLFVAPTALRAIRREDPQAIHGVKYRHPRFRSL 187
            TI+YEG P   PD   ++ ++  +    +F APTA+R +++     I   K+       L
Sbjct: 303  TIVYEGLPTW-PDCGVWWTIVEKYQVSRMFSAPTAIRVLKKFPTAEIR--KHDLSSLEVL 359

Query: 188  FLAGEHCDVDTLSWAKEIFKVPVLDHWWQTETGWPITCPAAGLETRADLVPPPGSAGRPV 367
            +LAGE  D  T SW      VPV+D++WQTE+GWPI   A GL+ R   +   GS G P+
Sbjct: 360  YLAGEPLDEPTASWVSNTLDVPVIDNYWQTESGWPIMAIARGLDDRPTRL---GSPGVPM 416

Query: 368  PGYDVKVLDTNTGVQLGPNQLGRIVVKLPMPPGMASTLYNNDEMFYKIFFTKFPG-YYDT 544
             GY+V++L+  TG   G N+ G +VV+ P+PPG   T++ +D  F K +++ F    Y T
Sbjct: 417  YGYNVQLLNEVTGEPCGVNEKGMLVVEGPLPPGCIQTIWGDDGRFVKTYWSLFSRPVYAT 476

Query: 545  MDAGMVTEFGHIMVMARDDDVLNIAGHRISSGALEEACLENPCVVECAVIGLDDQLKGQV 724
             D G+    G+  ++ R DDV+N+AGHR+ +  +EE+   +P V E AV+G+ D LKGQV
Sbjct: 477  FDWGIRDADGYHFILGRTDDVINVAGHRLGTREIEESISSHPGVAEVAVVGVKDALKGQV 536

Query: 725  PLALLVP-DTDTIK 763
             +A ++P ++D+++
Sbjct: 537  AVAFVIPKESDSLE 550
>sp|Q758X0|ACS1_ASHGO Acetyl-coenzyme A synthetase 1 (Acetate--CoA ligase 1)
            (Acyl-activating enzyme 1)
          Length = 694

 Score =  157 bits (397), Expect = 3e-38
 Identities = 98/285 (34%), Positives = 147/285 (51%), Gaps = 10/285 (3%)
 Frame = +2

Query: 2    CTTIIYEGKPVGTPDSSQYFRVLNWHNPVSLFVAPTALRAIRREDPQAIHGVKYRHPRFR 181
            CTT+++EG P   P  S+Y+ +++ ++    +VAPTALR ++R     + G   R    R
Sbjct: 362  CTTVVFEGTPA-YPSYSRYWDIIDKYSVTQFYVAPTALRLLKRAGDSYVDGYSLR--TLR 418

Query: 182  SLFLAGEHCDVDTLSWAKEIF---KVPVLDHWWQTETGWPITCPAAGLETRADLVPPPGS 352
            SL   GE    +   W   +    ++PV+D +WQTE+G  +  P AG  T       PGS
Sbjct: 419  SLGTVGEPIAAEVWEWYYTVIGKREIPVIDTYWQTESGAHLVTPLAGGSTPMK----PGS 474

Query: 353  AGRPVPGYDVKVLDTNTGVQL-GPNQLGRIVVKLPMPPGMASTLYNNDEMFYKIFFTKFP 529
            A  P  G D+ +LD  TG +L GPN  G + VK P P     T++NN + +   +   + 
Sbjct: 475  ASFPFFGIDLAILDPQTGEELLGPNVEGVLAVKQPWP-SFTRTIWNNHDRYLDTYLNPYK 533

Query: 530  GYYDTMDAGMVTEFGHIMVMARDDDVLNIAGHRISSGALEEACLENPCVVECAVIGLDDQ 709
            GYY   D       G I ++ R DDV+N++GHR+S+  +E A ++   V ECAV+G  D+
Sbjct: 534  GYYFAGDGAARDSQGFIWILGRVDDVVNVSGHRLSTAEVEAAIIQESMVAECAVVGFADE 593

Query: 710  LKGQVPLALLVP------DTDTIKAPEEIVSDTIKIVRDRIGAVA 826
            L GQ   A +V       +T + +  +EI    I  VR  IG  A
Sbjct: 594  LTGQAIAAFVVLKQKSSWNTASERELQEIKKHLILSVRRDIGPFA 638
>sp|Q01574|ACS1_YEAST Acetyl-coenzyme A synthetase 1 (Acetate--CoA ligase 1)
            (Acyl-activating enzyme 1)
          Length = 713

 Score =  156 bits (395), Expect = 6e-38
 Identities = 96/286 (33%), Positives = 145/286 (50%), Gaps = 11/286 (3%)
 Frame = +2

Query: 2    CTTIIYEGKPVGTPDSSQYFRVLNWHNPVSLFVAPTALRAIRREDPQAI--HGVKYRHPR 175
            C T+++EG P   P+ S+Y+ +++ H     +VAPTALR ++R     I  H +K     
Sbjct: 381  CATLVFEGTPA-YPNYSRYWDIIDEHKVTQFYVAPTALRLLKRAGDSYIENHSLK----S 435

Query: 176  FRSLFLAGEHCDVDTLSWAKEIF---KVPVLDHWWQTETGWPITCPAAGLETRADLVPPP 346
             R L   GE    +   W  E     ++P++D +WQTE+G  +  P AG  T       P
Sbjct: 436  LRCLGSVGEPIAAEVWEWYSEKIGKNEIPIVDTYWQTESGSHLVTPLAGGVTPMK----P 491

Query: 347  GSAGRPVPGYDVKVLDTNTGVQLGPNQLGRIVVKLPMPPGMASTLYNNDEMFYKIFFTKF 526
            GSA  P  G D  VLD NTG +L  +    ++      P  A T++ N + +   +   +
Sbjct: 492  GSASFPFFGIDAVVLDPNTGEELNTSHAEGVLAVKAAWPSFARTIWKNHDRYLDTYLNPY 551

Query: 527  PGYYDTMDAGMVTEFGHIMVMARDDDVLNIAGHRISSGALEEACLENPCVVECAVIGLDD 706
            PGYY T D     + G+I ++ R DDV+N++GHR+S+  +E A +E+P V ECAV+G +D
Sbjct: 552  PGYYFTGDGAAKDKDGYIWILGRVDDVVNVSGHRLSTAEIEAAIIEDPIVAECAVVGFND 611

Query: 707  QLKGQVPLALLVP------DTDTIKAPEEIVSDTIKIVRDRIGAVA 826
             L GQ   A +V        T T    ++I    +  VR  IG  A
Sbjct: 612  DLTGQAVAAFVVLKNKSSWSTATDDELQDIKKHLVFTVRKDIGPFA 657
>sp|O60011|ACS1_KLULA Acetyl-coenzyme A synthetase 1 (Acetate--CoA ligase 1)
            (Acyl-activating enzyme 1)
          Length = 707

 Score =  154 bits (389), Expect = 3e-37
 Identities = 88/251 (35%), Positives = 137/251 (54%), Gaps = 4/251 (1%)
 Frame = +2

Query: 2    CTTIIYEGKPVGTPDSSQYFRVLNWHNPVSLFVAPTALRAIRREDPQAIHGVKYRHPRFR 181
            CTT+++EG P   P+ S+Y+ +++ +     +VAPTALR ++R       G   +    R
Sbjct: 375  CTTLVFEGTPA-YPNFSRYWEIVDKYQVTQFYVAPTALRLLKRAGDSFTEGFSLKS--LR 431

Query: 182  SLFLAGEHCDVDTLSWAKEIF---KVPVLDHWWQTETGWPITCPAAGLETRADLVPPPGS 352
            SL   GE    +   W  E     ++P++D +WQTE+G  +  P AG  T       PG+
Sbjct: 432  SLGSVGEPIAAEVWEWYSEKIGKNELPIVDTYWQTESGSHLVTPLAGGATPMK----PGA 487

Query: 353  AGRPVPGYDVKVLDTNTGV-QLGPNQLGRIVVKLPMPPGMASTLYNNDEMFYKIFFTKFP 529
            A  P  G D+ VLD  TG+ Q G +  G + +K P P   A T++ N++ F   +   +P
Sbjct: 488  AAFPFFGIDLAVLDPTTGIEQTGEHAEGVLAIKRPWP-SFARTIWKNNDRFLDTYLKPYP 546

Query: 530  GYYDTMDAGMVTEFGHIMVMARDDDVLNIAGHRISSGALEEACLENPCVVECAVIGLDDQ 709
            GYY T D     + G   ++ R DDV+N++GHR+S+  +E A +E+  V ECAV+G +D+
Sbjct: 547  GYYFTGDGVARDKDGFFWILGRVDDVVNVSGHRLSTAEIEAAIIEDDMVAECAVVGFNDE 606

Query: 710  LKGQVPLALLV 742
            L GQ   A +V
Sbjct: 607  LTGQAVAAFVV 617
>sp|Q6FLU2|ACS1_CANGA Acetyl-coenzyme A synthetase 1 (Acetate--CoA ligase 1)
            (Acyl-activating enzyme 1)
          Length = 704

 Score =  152 bits (384), Expect = 1e-36
 Identities = 97/285 (34%), Positives = 147/285 (51%), Gaps = 10/285 (3%)
 Frame = +2

Query: 2    CTTIIYEGKPVGTPDSSQYFRVLNWHNPVSLFVAPTALRAIRREDPQAIHGVKYRHPRFR 181
            CTT+++EG P   P+ S+Y+ +++ H     +VAPTALR ++R     I G   +    R
Sbjct: 372  CTTLVFEGTPA-YPNFSRYWEIIDKHQVTQFYVAPTALRLLKRAGDSFIDGFSLKS--LR 428

Query: 182  SLFLAGEHCDVDTLSWAKEIF---KVPVLDHWWQTETGWPITCPAAGLETRADLVPPPGS 352
             L   GE    +   W  +     ++P++D +WQTE+G  +  P AG  T       PGS
Sbjct: 429  CLGSVGEPIAAEVWEWYSDKIGKNEIPIVDTYWQTESGSHLVTPLAGGVTPMK----PGS 484

Query: 353  AGRPVPGYDVKVLDTNTGVQLGPNQL-GRIVVKLPMPPGMASTLYNNDEMFYKIFFTKFP 529
            A  P  G +  +LD  TG ++  +   G + +K P P   A T++ N + F   +   + 
Sbjct: 485  ASLPFFGIETVILDPTTGEEINDSHAEGVLAIKRPWP-SFARTIWKNHDRFLDTYLNPYK 543

Query: 530  GYYDTMDAGMVTEFGHIMVMARDDDVLNIAGHRISSGALEEACLENPCVVECAVIGLDDQ 709
            GYY T D     + G+I ++ R DDV+N++GHR+S+  +E A +E+  V ECAV+G +D 
Sbjct: 544  GYYFTGDGAARDKDGYIWILGRVDDVVNVSGHRLSTAEIEAAIIEDRMVAECAVVGFNDD 603

Query: 710  LKGQVPLALLV-PDTDT-IKAPEEIVSD----TIKIVRDRIGAVA 826
            L GQ   A +V  D  T   A EE + D     I  VR  IG  A
Sbjct: 604  LTGQAVAAFVVLKDKSTWASASEEELQDIKKHLILTVRKDIGPFA 648
>sp|Q8NJN3|ACS2_CANAL Acetyl-coenzyme A synthetase 2 (Acetate--CoA ligase 2)
            (Acyl-activating enzyme 2)
          Length = 581

 Score =  143 bits (360), Expect = 7e-34
 Identities = 87/248 (35%), Positives = 127/248 (51%), Gaps = 4/248 (1%)
 Frame = +2

Query: 8    TIIYEGKPVGTPDSSQYFRVLNWHNPVSLFVAPTALRAIRREDPQAIHGVKYRHPRFRSL 187
            TII+EG P   PD  ++++++  H     +VAPTALR +R+   Q I  VKY     R+L
Sbjct: 342  TIIFEGTPA-YPDYGRFWQIVEKHKATHFYVAPTALRLLRKAGEQEI--VKYDLSSLRTL 398

Query: 188  FLAGEHCDVDTLSWAKEIF---KVPVLDHWWQTETGWPITCPAAGLETRADLVP-PPGSA 355
               GE    D   W  E     +  + D +WQTE+G  +  P AG+      VP  PGSA
Sbjct: 399  GSVGEPISPDIWEWYNEFVGKNQCHISDTYWQTESGSHLIAPLAGV------VPNKPGSA 452

Query: 356  GRPVPGYDVKVLDTNTGVQLGPNQLGRIVVKLPMPPGMASTLYNNDEMFYKIFFTKFPGY 535
              P  G D  ++D  TGV++  N    ++      P MA T+Y N   +   +   +PGY
Sbjct: 453  SYPFFGIDAALIDPVTGVEIEGNDAEGVLAIKDHWPSMARTVYKNHTKYMDTYMNPYPGY 512

Query: 536  YDTMDAGMVTEFGHIMVMARDDDVLNIAGHRISSGALEEACLENPCVVECAVIGLDDQLK 715
            Y T D       G+  +  R DDV+N++GHR+S+  +E A +E+  V E AV+G+ D + 
Sbjct: 513  YFTGDGAARDHDGYYWIRGRVDDVVNVSGHRLSTAEIEAALIEDKKVSEAAVVGIHDDIT 572

Query: 716  GQVPLALL 739
            GQ  L  L
Sbjct: 573  GQAALLTL 580
>sp|Q8KBY0|ACSA_CHLTE Acetyl-coenzyme A synthetase (Acetate--CoA ligase) (Acyl-activating
            enzyme)
          Length = 659

 Score =  141 bits (356), Expect = 2e-33
 Identities = 91/277 (32%), Positives = 140/277 (50%), Gaps = 3/277 (1%)
 Frame = +2

Query: 5    TTIIYEGKPVGTPDSSQYFRVLNWHNPVSLFVAPTALRAIRREDPQAIHGVKYRHPRFRS 184
            T  +YEG P   P   +++ ++N H    L+ APTA+RA  R   + +   K+     R 
Sbjct: 338  TVFMYEGAP-NYPQWDRFWDIINRHKITILYTAPTAIRAFIRAGNEWV--TKHDLSSLRL 394

Query: 185  LFLAGEHCDVDTLSWAKEIF---KVPVLDHWWQTETGWPITCPAAGLETRADLVPPPGSA 355
            L   GE  + +   W  +     K P++D WWQTETG  +  P  G          PG+A
Sbjct: 395  LGTVGEPINPEAWMWYHKYVGQEKCPIVDTWWQTETGGIMISPMPGATPTK-----PGTA 449

Query: 356  GRPVPGYDVKVLDTNTGVQLGPNQLGRIVVKLPMPPGMASTLYNNDEMFYKIFFTKFPGY 535
             RP+PG  V V+  + G     N+ G +VVK P P  M  T+Y ++E + K ++++FPG 
Sbjct: 450  TRPLPGIMVDVVRKD-GTPCNANEGGYLVVKRPWP-SMLRTIYGDNERYEKTYWSEFPGM 507

Query: 536  YDTMDAGMVTEFGHIMVMARDDDVLNIAGHRISSGALEEACLENPCVVECAVIGLDDQLK 715
            Y T D     + G+I +M R DDV+N++GHR+ +  +E A + +  V E AV+   D++K
Sbjct: 508  YFTGDGARKDDDGYIWIMGRVDDVVNVSGHRLGTSEVESALVSHEAVAEAAVVSRPDEIK 567

Query: 716  GQVPLALLVPDTDTIKAPEEIVSDTIKIVRDRIGAVA 826
            G   L   V   D  +   ++     K V   IGA+A
Sbjct: 568  GNA-LVAFVTLKDGYEGDAKLRDSLGKHVAKEIGAIA 603
>sp|Q6BS00|ACS2_DEBHA Acetyl-coenzyme A synthetase 2 (Acetate--CoA ligase 2)
            (Acyl-activating enzyme 2)
          Length = 679

 Score =  139 bits (349), Expect = 1e-32
 Identities = 90/290 (31%), Positives = 144/290 (49%), Gaps = 13/290 (4%)
 Frame = +2

Query: 8    TIIYEGKPVGTPDSSQYFRVLNWHNPVSLFVAPTALRAIRREDPQAIHGVKYRHPRFRSL 187
            T+++EG P   PD  + ++++  H     +VAPTALR +R+   Q I   KY     R+L
Sbjct: 342  TVVFEGTPA-FPDYGRLWQIVEKHKATHFYVAPTALRLLRKSGEQEIE--KYDLSSLRTL 398

Query: 188  FLAGEHCDVDTLSWAKEIF---KVPVLDHWWQTETGWPITCPAAGLETRADLVP-PPGSA 355
               GE    D   W  E     +  V D +WQTE+G     P AG+      VP  PGSA
Sbjct: 399  GSVGEPISPDIWEWYNEKVGKGQCHVTDTYWQTESGSHFIAPIAGV------VPNKPGSA 452

Query: 356  GRPVPGYDVKVLDTNTGVQLGPNQLGRIVVKLPMPPGMASTLYNNDEMFYKIFFTKFPGY 535
              P  G    ++D  +G+++  N +  ++      P MA ++Y N   +   +   +PGY
Sbjct: 453  AVPFFGIQTCLIDPVSGIEIQGNDVEGVLAVKDTWPSMARSVYKNHTKYMDTYLNPYPGY 512

Query: 536  YDTMDAGMVTEFGHIMVMARDDDVLNIAGHRISSGALEEACLENPCVVECAVIGLDDQLK 715
            Y T D       G+  +  R DDV+N++GHR+S+  +E A +E+  + E AV+G++D L 
Sbjct: 513  YFTGDGAARDHDGYYWIRGRVDDVVNVSGHRLSTAEIEAALIEHNAISEAAVVGMNDDLT 572

Query: 716  GQVPLAL------LVPDTDTIKAPEE---IVSDTIKIVRDRIGAVAGMRN 838
            GQ  +A       L+ +    ++PEE   +  + I  VR +IG  A  ++
Sbjct: 573  GQTVVAFVALKEHLIANLKADESPEEALKLKKEMILQVRTQIGPFAAPKS 622
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,963,475
Number of Sequences: 369166
Number of extensions: 2431249
Number of successful extensions: 6961
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6795
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8197207050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)