DrC_00141
- Cluster detail
- GO Category :
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_00141 (657 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|P15845|SM20_SCHMA 20 kDa calcium-binding protein (Antige... 265 8e-71 sp|Q9BLG0|TNNC_TODPA Troponin C (TN-C) 143 3e-34 sp|P35622|TNNC_PATYE Troponin C (TN-C) 143 4e-34 sp|Q95NR9|CALM_METSE Calmodulin (CaM) 119 7e-27 sp|P02594|CALM_ELEEL Calmodulin (CaM) 118 2e-26 sp|P62184|CALM_RENRE Calmodulin (CaM) 118 2e-26 sp|P60204|CALM_EMENI Calmodulin (CaM) >gi|41018622|sp|P6020... 117 2e-26 sp|P61860|CALM_COLTR Calmodulin (CaM) >gi|48428807|sp|P6186... 117 2e-26 sp|O97341|CALM_SUBDO Calmodulin (CaM) 117 2e-26 sp|Q9UB37|CALM2_BRALA Calmodulin-2 (CaM 2) 117 3e-26
>sp|P15845|SM20_SCHMA 20 kDa calcium-binding protein (Antigen SM20) Length = 154 Score = 265 bits (677), Expect = 8e-71 Identities = 123/153 (80%), Positives = 140/153 (91%) Frame = +1 Query: 58 MAFKVDDYTIPEEKVKVAKETFKKFDKRGQEKISTNDLGPAFRAMNANVKPDSLKEWADM 237 MAFK+DD+TI E++VK+AK+ FK+FDKRGQEKIST DLGPAFRA+N VKPD+LKEWAD Sbjct: 1 MAFKIDDFTIQEDQVKIAKDVFKRFDKRGQEKISTTDLGPAFRALNLTVKPDTLKEWADQ 60 Query: 238 VDDDATGFIDLNGFLTCYGKILIDEQDERDMREAFRVLDKKNRGEIDVEDLRWILKSLGD 417 VDDDATGFID NGFL CYGK L ++QDERD+R+AFRVLDK RGEIDVEDLRWILK LGD Sbjct: 61 VDDDATGFIDFNGFLICYGKKLQEDQDERDLRDAFRVLDKNKRGEIDVEDLRWILKGLGD 120 Query: 418 DLTEEDVEEMIRDTDTDGSGFVDFDEFYKLMTS 516 DLTEE++++MIRDTDTDGSGFVDFDEFYKLMTS Sbjct: 121 DLTEEEIDDMIRDTDTDGSGFVDFDEFYKLMTS 153
>sp|Q9BLG0|TNNC_TODPA Troponin C (TN-C) Length = 148 Score = 143 bits (361), Expect = 3e-34 Identities = 67/142 (47%), Positives = 100/142 (70%) Frame = +1 Query: 85 IPEEKVKVAKETFKKFDKRGQEKISTNDLGPAFRAMNANVKPDSLKEWADMVDDDATGFI 264 I E++ A + FK DK+ + +S +L F+++ +V D L++W D +D+DATG I Sbjct: 5 ISEKQFNDAHQAFKLHDKKDEGAVSNKELTNLFKSLALHVSDDKLQQWVDEMDEDATGVI 64 Query: 265 DLNGFLTCYGKILIDEQDERDMREAFRVLDKKNRGEIDVEDLRWILKSLGDDLTEEDVEE 444 F + + + +++DER++R AFRVLDK N+G IDVEDLRWILKSLGDDL ++++++ Sbjct: 65 RWEKFKILFERKVQEDEDERELRSAFRVLDKNNQGVIDVEDLRWILKSLGDDLNDDEIQD 124 Query: 445 MIRDTDTDGSGFVDFDEFYKLM 510 MI +TDTDGSG VD++EF LM Sbjct: 125 MINETDTDGSGTVDYEEFSALM 146
Score = 43.5 bits (101), Expect = 5e-04
Identities = 17/67 (25%), Positives = 42/67 (62%)
Frame = +1
Query: 298 ILIDEQDERDMREAFRVLDKKNRGEIDVEDLRWILKSLGDDLTEEDVEEMIRDTDTDGSG 477
++I E+ D +AF++ DKK+ G + ++L + KSL ++++ +++ + + D D +G
Sbjct: 3 VVISEKQFNDAHQAFKLHDKKDEGAVSNKELTNLFKSLALHVSDDKLQQWVDEMDEDATG 62
Query: 478 FVDFDEF 498
+ +++F
Sbjct: 63 VIRWEKF 69
>sp|P35622|TNNC_PATYE Troponin C (TN-C) Length = 152 Score = 143 bits (360), Expect = 4e-34 Identities = 66/148 (44%), Positives = 106/148 (71%) Frame = +1 Query: 73 DDYTIPEEKVKVAKETFKKFDKRGQEKISTNDLGPAFRAMNANVKPDSLKEWADMVDDDA 252 +++ E+++ AK+ F DK+ + +S DLG F+++ VK D +K+W+D +D++A Sbjct: 2 EEFRASEKQILDAKQAFCNVDKKKEGTVSCKDLGAIFKSLGLLVKDDKIKDWSDEMDEEA 61 Query: 253 TGFIDLNGFLTCYGKILIDEQDERDMREAFRVLDKKNRGEIDVEDLRWILKSLGDDLTEE 432 TG ++ + ++ + + L ++ DER+++EAFRVLDK+ +G I V+ LRWIL SLGD+LTEE Sbjct: 62 TGRLNCDAWIQLFERKLKEDLDERELKEAFRVLDKEKKGVIKVDVLRWILSSLGDELTEE 121 Query: 433 DVEEMIRDTDTDGSGFVDFDEFYKLMTS 516 ++E MI +TDTDGSG VD++EF LM S Sbjct: 122 EIENMIAETDTDGSGTVDYEEFKCLMMS 149
>sp|Q95NR9|CALM_METSE Calmodulin (CaM) Length = 149 Score = 119 bits (298), Expect = 7e-27 Identities = 60/144 (41%), Positives = 87/144 (60%) Frame = +1 Query: 85 IPEEKVKVAKETFKKFDKRGQEKISTNDLGPAFRAMNANVKPDSLKEWADMVDDDATGFI 264 + EE++ KE F FDK G I+T +LG R++ N L++ + VD D G I Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64 Query: 265 DLNGFLTCYGKILIDEQDERDMREAFRVLDKKNRGEIDVEDLRWILKSLGDDLTEEDVEE 444 D FLT + + D E ++REAFRV DK G I +LR ++ +LG+ LT+E+V+E Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 124 Query: 445 MIRDTDTDGSGFVDFDEFYKLMTS 516 MIR+ D DG G V+++EF K+MTS Sbjct: 125 MIREADIDGDGQVNYEEFVKMMTS 148
>sp|P02594|CALM_ELEEL Calmodulin (CaM) Length = 149 Score = 118 bits (295), Expect = 2e-26 Identities = 59/144 (40%), Positives = 87/144 (60%) Frame = +1 Query: 85 IPEEKVKVAKETFKKFDKRGQEKISTNDLGPAFRAMNANVKPDSLKEWADMVDDDATGFI 264 + EE++ KE F FDK G I+T +LG R++ N L++ + VD D G I Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64 Query: 265 DLNGFLTCYGKILIDEQDERDMREAFRVLDKKNRGEIDVEDLRWILKSLGDDLTEEDVEE 444 D FLT K + D E ++REAFRV DK G I +LR ++ +LG+ LT+E+V+E Sbjct: 65 DFPEFLTMMAKKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 124 Query: 445 MIRDTDTDGSGFVDFDEFYKLMTS 516 MIR+ D DG G V+++EF ++MT+ Sbjct: 125 MIREADIDGDGQVNYEEFVQMMTA 148
>sp|P62184|CALM_RENRE Calmodulin (CaM) Length = 148 Score = 118 bits (295), Expect = 2e-26 Identities = 60/144 (41%), Positives = 87/144 (60%) Frame = +1 Query: 85 IPEEKVKVAKETFKKFDKRGQEKISTNDLGPAFRAMNANVKPDSLKEWADMVDDDATGFI 264 + EE++ KE F FDK G I+T +LG R++ N L++ + VD D G I Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 63 Query: 265 DLNGFLTCYGKILIDEQDERDMREAFRVLDKKNRGEIDVEDLRWILKSLGDDLTEEDVEE 444 D FLT + + D E ++REAFRV DK G I +LR ++ +LG+ LT+E+V+E Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDE 123 Query: 445 MIRDTDTDGSGFVDFDEFYKLMTS 516 MIR+ D DG G V+++EF K+MTS Sbjct: 124 MIREADIDGDGQVNYEEFVKMMTS 147
>sp|P60204|CALM_EMENI Calmodulin (CaM) sp|P60205|CALM_ASPOR Calmodulin (CaM) sp|P60206|CALM_AJECA Calmodulin (CaM) Length = 149 Score = 117 bits (294), Expect = 2e-26 Identities = 57/143 (39%), Positives = 88/143 (61%) Frame = +1 Query: 82 TIPEEKVKVAKETFKKFDKRGQEKISTNDLGPAFRAMNANVKPDSLKEWADMVDDDATGF 261 ++ EE+V KE F FDK G +I+T +LG R++ N L++ + VD D G Sbjct: 4 SLTEEQVSEYKEAFSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGT 63 Query: 262 IDLNGFLTCYGKILIDEQDERDMREAFRVLDKKNRGEIDVEDLRWILKSLGDDLTEEDVE 441 ID FLT + + D E ++REAF+V D+ N G I +LR ++ S+G+ LT+++V+ Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVD 123 Query: 442 EMIRDTDTDGSGFVDFDEFYKLM 510 EMIR+ D DG G +D++EF +LM Sbjct: 124 EMIREADQDGDGRIDYNEFVQLM 146
>sp|P61860|CALM_COLTR Calmodulin (CaM) sp|P61861|CALM_COLGL Calmodulin (CaM) sp|P61859|CALM_NEUCR Calmodulin (CaM) Length = 149 Score = 117 bits (294), Expect = 2e-26 Identities = 57/143 (39%), Positives = 88/143 (61%) Frame = +1 Query: 82 TIPEEKVKVAKETFKKFDKRGQEKISTNDLGPAFRAMNANVKPDSLKEWADMVDDDATGF 261 ++ EE+V KE F FDK G +I+T +LG R++ N L++ + VD D G Sbjct: 4 SLTEEQVSEFKEAFSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGT 63 Query: 262 IDLNGFLTCYGKILIDEQDERDMREAFRVLDKKNRGEIDVEDLRWILKSLGDDLTEEDVE 441 ID FLT + + D E ++REAF+V D+ N G I +LR ++ S+G+ LT+++V+ Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVD 123 Query: 442 EMIRDTDTDGSGFVDFDEFYKLM 510 EMIR+ D DG G +D++EF +LM Sbjct: 124 EMIREADQDGDGRIDYNEFVQLM 146
>sp|O97341|CALM_SUBDO Calmodulin (CaM) Length = 149 Score = 117 bits (294), Expect = 2e-26 Identities = 59/144 (40%), Positives = 87/144 (60%) Frame = +1 Query: 85 IPEEKVKVAKETFKKFDKRGQEKISTNDLGPAFRAMNANVKPDSLKEWADMVDDDATGFI 264 + EE++ KE F FDK G I+T +LG R++ N L++ + VD D G I Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDTDGNGTI 64 Query: 265 DLNGFLTCYGKILIDEQDERDMREAFRVLDKKNRGEIDVEDLRWILKSLGDDLTEEDVEE 444 D FLT + + + E ++REAFRV DK G I +LR ++ +LG+ LT+E+V+E Sbjct: 65 DFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 124 Query: 445 MIRDTDTDGSGFVDFDEFYKLMTS 516 MIR+ DTDG G V+++EF +MTS Sbjct: 125 MIREADTDGDGQVNYEEFVGMMTS 148
>sp|Q9UB37|CALM2_BRALA Calmodulin-2 (CaM 2) Length = 149 Score = 117 bits (293), Expect = 3e-26 Identities = 58/144 (40%), Positives = 87/144 (60%) Frame = +1 Query: 85 IPEEKVKVAKETFKKFDKRGQEKISTNDLGPAFRAMNANVKPDSLKEWADMVDDDATGFI 264 + EE++ KE F FDK G I+T +LG R++ N L++ + VD D G I Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64 Query: 265 DLNGFLTCYGKILIDEQDERDMREAFRVLDKKNRGEIDVEDLRWILKSLGDDLTEEDVEE 444 D FLT + + D E ++REAFRV DK G I +LR ++ +LG+ LT+E+V+E Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 124 Query: 445 MIRDTDTDGSGFVDFDEFYKLMTS 516 M+R+ D DG G V+++EF ++MTS Sbjct: 125 MVREADIDGDGQVNYEEFVEMMTS 148
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,679,918
Number of Sequences: 369166
Number of extensions: 1013866
Number of successful extensions: 4526
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4154
length of database: 68,354,980
effective HSP length: 106
effective length of database: 48,773,070
effective search space used: 5462583840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Cluster detail
