Planaria EST Database


DrC_00071

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00071
         (481 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9VJD2|MKI1_DROME  Probable mitogen-activated protein kin...    65   8e-11
sp|Q6C537|YKT6_YARLI  Synaptobrevin homolog YKT6                   31   1.7  
sp|Q99396|CY42_TRYBB  Receptor-type adenylate cyclase GRESAG...    31   1.7  
sp|P14735|IDE_HUMAN  Insulin-degrading enzyme (Insulysin) (I...    29   4.9  
sp|Q14202|ZN261_HUMAN  Zinc finger protein 261 (Zinc finger ...    29   6.4  
sp|Q9JLM4|ZN261_MOUSE  Zinc finger protein 261 (DXHXS6673E p...    29   6.4  
sp|P03593|V90K_AMVLE  90 kDa protein                               28   8.3  
>sp|Q9VJD2|MKI1_DROME Probable mitogen-activated protein kinase kinase interacting
           protein
          Length = 124

 Score = 65.1 bits (157), Expect = 8e-11
 Identities = 37/108 (34%), Positives = 58/108 (53%)
 Frame = +2

Query: 29  VSDYLKNFLSISDGIIGIYLCDKDGVIMVKETIDENVDQFVQPHMQTSFTTAIQQAAKMN 208
           +  YL   L    G+  I + D+DGV +++ + ++NVD  + P    +FTTA  QA+K+ 
Sbjct: 5   IKKYLDGLLQKVSGLYVIQITDRDGVPLLRVSQEKNVDFALMPSFIPTFTTACDQASKLG 64

Query: 209 MGSTKYIITRYTEFVICQFNFARDPTKPLIAVVVGNNMADIGMMLALE 352
           +G  K II+ Y+ + + Q N       PLI   VG    + G +LALE
Sbjct: 65  LGRNKTIISMYSNYQVVQMN-----KLPLILTFVGAENCNTGHILALE 107
>sp|Q6C537|YKT6_YARLI Synaptobrevin homolog YKT6
          Length = 200

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 15/79 (18%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
 Frame = +2

Query: 14  KSNMAVSDYLKNFLSISDGIIGIYLCDKDGVIMVKET-IDENVDQFVQPHMQTSFTTAIQ 190
           + ++  +DY+ +    SDG+ G+ + D++  + V  T +++ +++++  H +  +  A +
Sbjct: 56  RQSVEENDYVGHAYLRSDGLGGVIITDQEYPVRVAYTLLNKVLEEYLTKHPKAEWENAKE 115

Query: 191 QAAKMNMGSTKYIITRYTE 247
            ++K+ M   +  + RY +
Sbjct: 116 ASSKLAMPELEDYVKRYQD 134
>sp|Q99396|CY42_TRYBB Receptor-type adenylate cyclase GRESAG 4.2 (ATP
           pyrophosphate-lyase) (Adenylyl cyclase)
          Length = 572

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -1

Query: 340 HHSDIRHIIANYNCN*WLRGISCEIKLTNHKFCISCDYIFSATHI 206
           HHS +R +I NY+C         E+K     F I+C   F+A  +
Sbjct: 296 HHSMVRSLIENYDC--------YEVKTVGDSFMIACKSPFAAVQL 332
>sp|P14735|IDE_HUMAN Insulin-degrading enzyme (Insulysin) (Insulinase) (Insulin protease)
          Length = 1019

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 15/62 (24%), Positives = 33/62 (53%)
 Frame = +2

Query: 104  VIMVKETIDENVDQFVQPHMQTSFTTAIQQAAKMNMGSTKYIITRYTEFVICQFNFARDP 283
            +I ++++I++  ++  Q H+Q      + +  K++    KY    + E +  Q+NF RD 
Sbjct: 867  LITMEKSIEDMTEEAFQKHIQALAIRRLDKPKKLSAECAKY----WGEIISQQYNFDRDN 922

Query: 284  TK 289
            T+
Sbjct: 923  TE 924
>sp|Q14202|ZN261_HUMAN Zinc finger protein 261 (Zinc finger MYM-type protein 3) (DXS6673E
            protein)
          Length = 1370

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +2

Query: 143  QFVQPHMQTSFTTAIQQAAKMN--MGSTKYIITRY 241
            Q  + HMQ SFT  ++Q+ K     G+TK +  RY
Sbjct: 1223 QTAEEHMQLSFTNVVRQSRKCTTPRGTTKVVSIRY 1257
>sp|Q9JLM4|ZN261_MOUSE Zinc finger protein 261 (DXHXS6673E protein)
          Length = 1370

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +2

Query: 143  QFVQPHMQTSFTTAIQQAAKMN--MGSTKYIITRY 241
            Q  + HMQ SFT  ++Q+ K     G+TK +  RY
Sbjct: 1224 QTAEEHMQLSFTNVVRQSRKCTTPRGTTKVVSIRY 1258
>sp|P03593|V90K_AMVLE 90 kDa protein
          Length = 790

 Score = 28.5 bits (62), Expect = 8.3
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +2

Query: 281 PTKPLIAVVVGNNMADIGMMLALEPVLQHVGEFFSPL 391
           PTKP  AV+ GN+   +G ++   PV      FFS L
Sbjct: 248 PTKPYEAVISGNDWMTLGRIIPTTPVPTIRDVFFSGL 284
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,850,358
Number of Sequences: 369166
Number of extensions: 1056969
Number of successful extensions: 2379
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2378
length of database: 68,354,980
effective HSP length: 102
effective length of database: 49,512,010
effective search space used: 2822184570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00071

  1. Dr_sW_002_N10
  2. Dr_sW_019_C02