Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_002_N10
(481 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9VJD2|MKI1_DROME Probable mitogen-activated protein kin... 65 8e-11
sp|Q6C537|YKT6_YARLI Synaptobrevin homolog YKT6 31 1.7
sp|Q99396|CY42_TRYBB Receptor-type adenylate cyclase GRESAG... 31 1.7
sp|P14735|IDE_HUMAN Insulin-degrading enzyme (Insulysin) (I... 29 4.9
sp|Q14202|ZN261_HUMAN Zinc finger protein 261 (Zinc finger ... 29 6.4
sp|Q9JLM4|ZN261_MOUSE Zinc finger protein 261 (DXHXS6673E p... 29 6.4
sp|P03593|V90K_AMVLE 90 kDa protein 28 8.3
>sp|Q9VJD2|MKI1_DROME Probable mitogen-activated protein kinase kinase interacting
protein
Length = 124
Score = 65.1 bits (157), Expect = 8e-11
Identities = 37/108 (34%), Positives = 58/108 (53%)
Frame = +2
Query: 29 VSDYLKNFLSISDGIIGIYLCDKDGVIMVKETIDENVDQFVQPHMQTSFTTAIQQAAKMN 208
+ YL L G+ I + D+DGV +++ + ++NVD + P +FTTA QA+K+
Sbjct: 5 IKKYLDGLLQKVSGLYVIQITDRDGVPLLRVSQEKNVDFALMPSFIPTFTTACDQASKLG 64
Query: 209 MGSTKYIITRYTEFVICQFNFARDPTKPLIAVVVGNNMADIGMMLALE 352
+G K II+ Y+ + + Q N PLI VG + G +LALE
Sbjct: 65 LGRNKTIISMYSNYQVVQMN-----KLPLILTFVGAENCNTGHILALE 107
>sp|Q6C537|YKT6_YARLI Synaptobrevin homolog YKT6
Length = 200
Score = 30.8 bits (68), Expect = 1.7
Identities = 15/79 (18%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +2
Query: 14 KSNMAVSDYLKNFLSISDGIIGIYLCDKDGVIMVKET-IDENVDQFVQPHMQTSFTTAIQ 190
+ ++ +DY+ + SDG+ G+ + D++ + V T +++ +++++ H + + A +
Sbjct: 56 RQSVEENDYVGHAYLRSDGLGGVIITDQEYPVRVAYTLLNKVLEEYLTKHPKAEWENAKE 115
Query: 191 QAAKMNMGSTKYIITRYTE 247
++K+ M + + RY +
Sbjct: 116 ASSKLAMPELEDYVKRYQD 134
>sp|Q99396|CY42_TRYBB Receptor-type adenylate cyclase GRESAG 4.2 (ATP
pyrophosphate-lyase) (Adenylyl cyclase)
Length = 572
Score = 30.8 bits (68), Expect = 1.7
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -1
Query: 340 HHSDIRHIIANYNCN*WLRGISCEIKLTNHKFCISCDYIFSATHI 206
HHS +R +I NY+C E+K F I+C F+A +
Sbjct: 296 HHSMVRSLIENYDC--------YEVKTVGDSFMIACKSPFAAVQL 332
>sp|P14735|IDE_HUMAN Insulin-degrading enzyme (Insulysin) (Insulinase) (Insulin protease)
Length = 1019
Score = 29.3 bits (64), Expect = 4.9
Identities = 15/62 (24%), Positives = 33/62 (53%)
Frame = +2
Query: 104 VIMVKETIDENVDQFVQPHMQTSFTTAIQQAAKMNMGSTKYIITRYTEFVICQFNFARDP 283
+I ++++I++ ++ Q H+Q + + K++ KY + E + Q+NF RD
Sbjct: 867 LITMEKSIEDMTEEAFQKHIQALAIRRLDKPKKLSAECAKY----WGEIISQQYNFDRDN 922
Query: 284 TK 289
T+
Sbjct: 923 TE 924
>sp|Q14202|ZN261_HUMAN Zinc finger protein 261 (Zinc finger MYM-type protein 3) (DXS6673E
protein)
Length = 1370
Score = 28.9 bits (63), Expect = 6.4
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +2
Query: 143 QFVQPHMQTSFTTAIQQAAKMN--MGSTKYIITRY 241
Q + HMQ SFT ++Q+ K G+TK + RY
Sbjct: 1223 QTAEEHMQLSFTNVVRQSRKCTTPRGTTKVVSIRY 1257
>sp|Q9JLM4|ZN261_MOUSE Zinc finger protein 261 (DXHXS6673E protein)
Length = 1370
Score = 28.9 bits (63), Expect = 6.4
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +2
Query: 143 QFVQPHMQTSFTTAIQQAAKMN--MGSTKYIITRY 241
Q + HMQ SFT ++Q+ K G+TK + RY
Sbjct: 1224 QTAEEHMQLSFTNVVRQSRKCTTPRGTTKVVSIRY 1258
>sp|P03593|V90K_AMVLE 90 kDa protein
Length = 790
Score = 28.5 bits (62), Expect = 8.3
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 281 PTKPLIAVVVGNNMADIGMMLALEPVLQHVGEFFSPL 391
PTKP AV+ GN+ +G ++ PV FFS L
Sbjct: 248 PTKPYEAVISGNDWMTLGRIIPTTPVPTIRDVFFSGL 284
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,850,358
Number of Sequences: 369166
Number of extensions: 1056969
Number of successful extensions: 2379
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2378
length of database: 68,354,980
effective HSP length: 102
effective length of database: 49,512,010
effective search space used: 2822184570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)