Planarian EST Database

DrC_00063

Cluster detail
GO Category : Not Available
Consensus Sequence :
>DrC_00063 AATGATTCAGATCAATTAGAACATGATATAATATTTATGATAAGTGATGAATCACCTGGT AGAGAAAAAATGTTTGTAATTAATCCAGTAACAGCTGAAAATCGTGAGCAATGGGTTATT CAACTTAGGGATATTCAAAGAATGCAACAAGATTTCTTATTAGCACTCCAAGACCCGAAA AGATTTGCTAGTAAAGTTGATTCTGGAGGAAAAGATTCAAATTTTCTAAAACCAGTATCA GATTCATCTCGTGATGGAAATTCTGGCTCTAAAAAGAAACAAAAATGGCCGACTTTCAAT GCTGGAAAAAGTGGGAGTATGTTAATTAAACATTTACGGCCACACAGTGAAAAATTTGCC GATAATTCAACAGTTACCTCACCCAGAGGAAGTAGCGCGGATCGAAAAGGATTGCACTCT GATGATAAATTATCAAGAATTAATTGCCTGAATACCAGTGACAGTGAATTAAATAAATCT CCTGATTCTATGAGTGTAAATGCTAAAGACATGAAGAAAACTACATGTGATCTTTTAAAT GATGATGACTCATCTGCGATCAAACCGCGTGCTTACAGGTCGGCATTTTCATTTCGATTG AAACGCTCCAAATGTGATACAAAAATCAATACCCATTGTCATTCTAAATCAGATGAACTT GGTGTTGCCAATAGTCAGCCATTGAGTCCCGGTGCTAATACTGCCCCTGTTAGTGCAACG TCTCATAAGAAGAAAGGTTCAAATATTTTGCACATATTTACCTCTAATCGCAATAAAAAC AAAACCCCATCAACTCCTCAAAACAATGACTGATAGTACTCATGACCATGCCCATTTCTT TCCTTGTAATTATTATTCTATGAAATATTGAGAGATCATTTCTGGTTCAGTCAATTGCTG ATGATTATGATTATCATACTGAAAATGGTGATGATGTTAAACTGACCGTTATTAATGATA TTGTT

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00063
         (965 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9NZW4|DSPP_HUMAN  Dentin sialophosphoprotein precursor [...    40   0.013
sp|P87137|YDM6_SCHPO  Hypothetical protein C57A7.06 in chrom...    39   0.017
sp|O42970|YB95_SCHPO  Hypothetical serine-rich protein C1E8....    37   0.083
sp|Q9U9I5|SWA_DROPS  Swallow protein                               37   0.11 
sp|P32583|SRP40_YEAST  Suppressor protein SRP40                    36   0.19 
sp|O15234|CASC3_HUMAN  Cancer susceptibility candidate gene ...    35   0.41 
sp|P29148|Npre_PAEPO  Bacillolysin precursor (Neutral protease)    34   0.54 
sp|Q6KI49|RS3_MYCMO  30S ribosomal protein S3                      34   0.54 
sp|Q14669|TRI12_HUMAN  Thyroid receptor interacting protein ...    34   0.54 
sp|P97399|DSPP_MOUSE  Dentin sialophosphoprotein precursor (...    34   0.70

>sp|Q9NZW4|DSPP_HUMAN Dentin sialophosphoprotein precursor [Contains: Dentin phosphoprotein
            (Dentin phosphophoryn) (DPP); Dentin sialoprotein (DSP)]
          Length = 1253

 Score = 39.7 bits (91), Expect = 0.013
 Identities = 49/203 (24%), Positives = 80/203 (39%), Gaps = 1/203 (0%)
 Frame = +1

Query: 190  SKVDSGGKDSNFLKPVSDSSRDGNSGSKKKQKWPTFNAGKSGSMLIKHLRPHSEKFADNS 369
            S   S   DS+     SDSS   NS         + ++  S S    +    S+     S
Sbjct: 758  SSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSD-----S 812

Query: 370  TVTSPRGSSADRKGLHSDDKLSRINCLNTSDS-ELNKSPDSMSVNAKDMKKTTCDLLNDD 546
            + +S   SS      +S D     N  ++SDS + + S DS S N  D   ++ D  +  
Sbjct: 813  SDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDSSDSDSSNRSDSSNSS-DSSDSS 871

Query: 547  DSSAIKPRAYRSAFSFRLKRSKCDTKINTHCHSKSDELGVANSQPLSPGANTAPVSATSH 726
            DSS     +  S  S   + S      ++   S SD    +NS   S  +N++  S +S+
Sbjct: 872  DSSNSSDSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSN 931

Query: 727  KKKGSNILHIFTSNRNKNKTPST 795
                SN      S+ + + + S+
Sbjct: 932  SSDNSNSSDSSNSSDSSDSSDSS 954


 Score = 36.6 bits (83), Expect = 0.11
 Identities = 49/209 (23%), Positives = 81/209 (38%), Gaps = 3/209 (1%)
 Frame = +1

Query: 190  SKVDSGGKDSNFLKPVSDSSRDGNSGSKKKQKWPTFNAGKSGSMLIKHLRPHSEKFADNS 369
            S   S   DS+     SDSS D  S S K +   + +  KS S         S   +D+S
Sbjct: 601  SSDSSDSSDSSDSSDSSDSS-DSKSDSSKSESDSSDSDSKSDSS--DSNSSDSSDNSDSS 657

Query: 370  TVTSPRGSSADRKGLHSDDKLSRINCLNTSDSELNKSPDSMSVNAKDMKKTTCDLLNDDD 549
              ++   SS       S D  S  +  ++SDS  +      S ++   + +     +D D
Sbjct: 658  DSSNSSNSSDSSDSSDSSDSSSSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSD 717

Query: 550  SSAIKPRAYRSAFSFRLKRSKCDTKINTHCHSKSDELGVAN---SQPLSPGANTAPVSAT 720
            SS        S+ S     S  D+  ++     SD    +N   S   S  +N++  S +
Sbjct: 718  SS-------DSSDSSNSNSSDSDSSNSSDSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDS 770

Query: 721  SHKKKGSNILHIFTSNRNKNKTPSTPQNN 807
            S     S+  +   SN + N + S+  +N
Sbjct: 771  SDSSDSSDSSNSSDSNDSSNSSDSSDSSN 799


 Score = 35.8 bits (81), Expect = 0.19
 Identities = 41/212 (19%), Positives = 74/212 (34%)
 Frame = +1

Query: 172  DPKRFASKVDSGGKDSNFLKPVSDSSRDGNSGSKKKQKWPTFNAGKSGSMLIKHLRPHSE 351
            D    +   DS     +     SDSS   +S S       + ++  S           S 
Sbjct: 700  DSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSDSSDSSNSSDSSDSS 759

Query: 352  KFADNSTVTSPRGSSADRKGLHSDDKLSRINCLNTSDSELNKSPDSMSVNAKDMKKTTCD 531
              +++S  +    SS      +S D     N  ++SDS  +    + S ++     +  D
Sbjct: 760  DSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSD 819

Query: 532  LLNDDDSSAIKPRAYRSAFSFRLKRSKCDTKINTHCHSKSDELGVANSQPLSPGANTAPV 711
              N  DSS     +  S  S     S      ++   ++SD    ++S   S  +N++  
Sbjct: 820  SSNSSDSSNSSDSSDSSNSSDSSDSSDSSDSSDSDSSNRSDSSNSSDSSDSSDSSNSSDS 879

Query: 712  SATSHKKKGSNILHIFTSNRNKNKTPSTPQNN 807
            S +S             SN + N + S+  +N
Sbjct: 880  SDSSDSS---------DSNESSNSSDSSDSSN 902


 Score = 33.9 bits (76), Expect = 0.70
 Identities = 45/207 (21%), Positives = 78/207 (37%)
 Frame = +1

Query: 190  SKVDSGGKDSNFLKPVSDSSRDGNSGSKKKQKWPTFNAGKSGSMLIKHLRPHSEKFADNS 369
            S   S   DS+     SDSS   NS         + ++  SGS         S+  +D+S
Sbjct: 1024 SSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSGSSDSSDSSDSSDS-SDSS 1082

Query: 370  TVTSPRGSSADRKGLHSDDKLSRINCLNTSDSELNKSPDSMSVNAKDMKKTTCDLLNDDD 549
              +    SS   +   S D     +  ++SDS  + S DS   +       + D  +  D
Sbjct: 1083 DSSDSSDSSDSSESSDSSDSSDSSDSSDSSDS--SDSSDSSDSSDSSDSSNSSDSSDSSD 1140

Query: 550  SSAIKPRAYRSAFSFRLKRSKCDTKINTHCHSKSDELGVANSQPLSPGANTAPVSATSHK 729
            SS     +  S  S        D+  ++     SD    ++S   S  +++   S +S  
Sbjct: 1141 SSDSSDSSDSSDSS--------DSSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSDSSDS 1192

Query: 730  KKGSNILHIFTSNRNKNKTPSTPQNND 810
               S+  +   S+ + + + ST  +ND
Sbjct: 1193 SDSSDSSNSSDSSDSSDSSDSTSDSND 1219


 Score = 31.6 bits (70), Expect = 3.5
 Identities = 47/202 (23%), Positives = 78/202 (38%)
 Frame = +1

Query: 187  ASKVDSGGKDSNFLKPVSDSSRDGNSGSKKKQKWPTFNAGKSGSMLIKHLRPHSEKFADN 366
            +S   S   DS+     SDSS   NS S+      + ++  S S         S+    N
Sbjct: 679  SSSDSSSSSDSSNSSDSSDSSDSSNS-SESSDSSDSSDSDSSDS---------SDSSNSN 728

Query: 367  STVTSPRGSSADRKGLHSDDKLSRINCLNTSDSELNKSPDSMSVNAKDMKKTTCDLLNDD 546
            S+ +    SS       S D  +  +  ++SDS  N S  S S ++ D    + D  N  
Sbjct: 729  SSDSDSSNSSDSSDSSDSSDSSNSSDSSDSSDSS-NSSDSSDSSDSSD----SSDSSNSS 783

Query: 547  DSSAIKPRAYRSAFSFRLKRSKCDTKINTHCHSKSDELGVANSQPLSPGANTAPVSATSH 726
            DS+     +  S  S     S      ++   S SD    ++S   S  ++++  S +S 
Sbjct: 784  DSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSD 843

Query: 727  KKKGSNILHIFTSNRNKNKTPS 792
                S+     +SNR+ +   S
Sbjct: 844  SSDSSDSSDSDSSNRSDSSNSS 865


 Score = 31.2 bits (69), Expect = 4.6
 Identities = 45/227 (19%), Positives = 81/227 (35%), Gaps = 21/227 (9%)
 Frame = +1

Query: 190  SKVDSGGKDSNFLKPVSDSSRDGNSGSKKKQKWPTFNAGKSGSMLIKHLRPHSEKFADNS 369
            S   S   DSN     SDSS   NS         + ++  S S         +   + +S
Sbjct: 776  SSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDS 835

Query: 370  TVTSPRGSSADRKGLHSDDKLSRINCLNTSDSE-----LNKSPDSMSVNAKDMKKTT--- 525
            + +S    S+D       D  +R +  N+SDS       N S  S S ++ D  +++   
Sbjct: 836  SNSSDSSDSSDSSDSSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSNESSNSS 895

Query: 526  -------------CDLLNDDDSSAIKPRAYRSAFSFRLKRSKCDTKINTHCHSKSDELGV 666
                          D  N  DSS     +  S  S     S      N+   S S +   
Sbjct: 896  DSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSN 955

Query: 667  ANSQPLSPGANTAPVSATSHKKKGSNILHIFTSNRNKNKTPSTPQNN 807
            ++    S  ++ +  S+ S+    S+  +   S+ + + + S+  ++
Sbjct: 956  SSDSSNSGDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSD 1002


 Score = 30.8 bits (68), Expect = 6.0
 Identities = 42/195 (21%), Positives = 79/195 (40%), Gaps = 5/195 (2%)
 Frame = +1

Query: 238  SDSSRDGNSGSKKKQKWPTFNAGKSGSMLIKHLRPHSEKFADNS-TVTSPRGSSADRKGL 414
            SDS+ +GN+G+    K  +       S        +S   +D+S + +S   SS+D    
Sbjct: 524  SDSNGNGNNGNDDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSS 583

Query: 415  HSDDKLSR----INCLNTSDSELNKSPDSMSVNAKDMKKTTCDLLNDDDSSAIKPRAYRS 582
             SD   S      +  N+SDS  + S  S S ++ D   +  D    +  S+       S
Sbjct: 584  DSDSSDSSDSDSSDSSNSSDSS-DSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDS 642

Query: 583  AFSFRLKRSKCDTKINTHCHSKSDELGVANSQPLSPGANTAPVSATSHKKKGSNILHIFT 762
            + S     +  D+  N+     S+    ++S   S  ++++  S +S     SN      
Sbjct: 643  SDS-----NSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSSSSDSSNSSDSSD 697

Query: 763  SNRNKNKTPSTPQNN 807
            S+ + N + S+  ++
Sbjct: 698  SSDSSNSSESSDSSD 712

>sp|P87137|YDM6_SCHPO Hypothetical protein C57A7.06 in chromosome I
          Length = 929

 Score = 39.3 bits (90), Expect = 0.017
 Identities = 55/235 (23%), Positives = 93/235 (39%), Gaps = 31/235 (13%)
 Frame = +1

Query: 13  QLEHDIIFMISDESPGREKMFVINPVTAENREQ---WVIQLRDIQRMQQDFLLALQDPKR 183
           QLE+ I+    +ES G +     +    +N EQ   + +   D + +  D     +D KR
Sbjct: 24  QLENKILHSYEEESAGFD-----SEELEDNDEQGYSFGVNSEDDEEIDSDEAFDEEDEKR 78

Query: 184 FAS---------KVDSGGKDSNFLKPVSDSSRDGNSGSKKKQKWPTFNAGKSGSM----- 321
           FA          K +   K+ N  K +S +  D +  S    K    N G  GS      
Sbjct: 79  FADWSFNASKSGKSNKDHKNLNNTKEISLNEEDDSDDSVNSDKLE--NEGSVGSSIDENE 136

Query: 322 ------LIKHLRPHSEKFADNSTVTSP----RGSSADRKGLHSDDKLSRINCLNTSDSEL 471
                 L+ + +P   +    ST+  P       + D++ L   D  S     N S+SEL
Sbjct: 137 LVDLDTLLDNDQPEKNESNTASTIRPPWIGNNDHATDKENLLESDASSS----NDSESEL 192

Query: 472 NKSPDSMSVNAKDMKKTTCDLLNDD----DSSAIKPRAYRSAFSFRLKRSKCDTK 624
             S D+M+ +  + +  + D  +DD    DS     R Y  + + + K+ + D +
Sbjct: 193 TDSADNMNESDSESEIESSDSDHDDGENSDSKLDNLRNYIVSLNQKRKKDEADAE 247

>sp|O42970|YB95_SCHPO Hypothetical serine-rich protein C1E8.05 in chromosome II precursor
          Length = 317

 Score = 37.0 bits (84), Expect = 0.083
 Identities = 34/138 (24%), Positives = 57/138 (41%), Gaps = 8/138 (5%)
 Frame = +1

Query: 175 PKRFASKVDSGGKDSNFLKPVSDSSRDGNSGSKKKQKWPTFNAGKSGSMLIKHLRPHSEK 354
           P   +SK  S  K S+     S SS   +S SK        ++  S S         S K
Sbjct: 165 PSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSS----SSSSSKSSASPSSSKSSSK 220

Query: 355 FADNSTVTS--PRGSS------ADRKGLHSDDKLSRINCLNTSDSELNKSPDSMSVNAKD 510
           F+ +S +TS  P  SS      ++ K   +DD  S  +  ++  S ++ +  ++S +A  
Sbjct: 221 FSSSSFITSTTPASSSSSGAIVSNAKTASTDDSSSASSATSSVSSVVSSASSALSASASS 280

Query: 511 MKKTTCDLLNDDDSSAIK 564
              +     + D S A+K
Sbjct: 281 ASASVSSSASSDASPALK 298

>sp|Q9U9I5|SWA_DROPS Swallow protein
          Length = 529

 Score = 36.6 bits (83), Expect = 0.11
 Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
 Frame = +1

Query: 298 NAGKSGSMLIKHLRPHSEKFADNSTVTSPRGSSADRKGLHSDDK--LSRINCLNTSDSEL 471
           NAGK    L K+++PHS  F+++ST   P G+     G HS  +   SR    N S+S  
Sbjct: 339 NAGK----LKKNIQPHSLDFSNDSTEAEPNGNGTTSTG-HSSSRAITSRAAAPNNSESSH 393

Query: 472 NKSPDS-MSVNAKDMK 516
             S DS + V A D++
Sbjct: 394 PSSNDSAIEVEALDLR 409

>sp|P32583|SRP40_YEAST Suppressor protein SRP40
          Length = 406

 Score = 35.8 bits (81), Expect = 0.19
 Identities = 45/207 (21%), Positives = 78/207 (37%), Gaps = 16/207 (7%)
 Frame = +1

Query: 238 SDSSRDGNSGSKKKQKWPTFNAGKSGSMLIKHLRPHSEKFADNS--TVTSPRGSSADRKG 411
           SDSS  G+S S       + +  +S     K  R    + A  +    T P  SS+    
Sbjct: 98  SDSSSSGSSSSSSSSSDESSSESESEDETKKRARESDNEDAKETKKAKTEPESSSSSESS 157

Query: 412 LHSDDKLSRINCLNTSDSELNKSPDSMSVNAKDMK--------KTTCDLLNDDDSSAIKP 567
                  S     + SDS+ + S  S S +  D +         ++ D  +D DSS+   
Sbjct: 158 SSGSSSSSESESGSESDSDSSSSSSSSSDSESDSESDSQSSSSSSSSDSSSDSDSSS-SD 216

Query: 568 RAYRSAFSFRLKRSKCDTKINTHCHSKSDELGVANSQPLSPGANTAPVSATSHKKK---- 735
            +  S  S     S  D+  ++   S SD  G ++S   S  ++    S+ S        
Sbjct: 217 SSSDSDSSSSSSSSSSDSDSDSDSSSDSDSSGSSDSSSSSDSSSDESTSSDSSDSDSDSD 276

Query: 736 --GSNILHIFTSNRNKNKTPSTPQNND 810
              S+ L    +  +++K   TP +++
Sbjct: 277 SGSSSELETKEATADESKAEETPASSN 303


 Score = 33.9 bits (76), Expect = 0.70
 Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 5/197 (2%)
 Frame = +1

Query: 202 SGGKDSNFLKPVSDSSRDGNSGSKKKQKWPTFNAGKSGSMLIKHLRPHSEKFADNSTVTS 381
           SG   S+  +  S+S  D +S S          +  S S         S   + +S  +S
Sbjct: 159 SGSSSSSESESGSESDSDSSSSS----------SSSSDSESDSESDSQSSSSSSSSDSSS 208

Query: 382 PRGSSADRKGLHSDDKLSRINCLNTSDSELNKSPDSMSVNAKDMKKTTCDLLNDDDSSAI 561
              SS+      SD   S  +  + SDS+ + S DS S  + D   ++ D  +D+ +S+ 
Sbjct: 209 DSDSSSSDSSSDSDSSSSSSSSSSDSDSDSDSSSDSDSSGSSD-SSSSSDSSSDESTSSD 267

Query: 562 KPRAYRSAFSFRLKRSKCDTKINTHCHSKSDELGVANSQPL-----SPGANTAPVSATSH 726
              +   + S     S+ +TK  T   SK++E   ++++       S  AN   + A + 
Sbjct: 268 SSDSDSDSDSG--SSSELETKEATADESKAEETPASSNESTPSASSSSSANKLNIPAGTD 325

Query: 727 KKKGSNILHIFTSNRNK 777
           + K     H    +R+K
Sbjct: 326 EIKEGQRKHFSRVDRSK 342


 Score = 32.7 bits (73), Expect = 1.6
 Identities = 37/170 (21%), Positives = 63/170 (37%), Gaps = 4/170 (2%)
 Frame = +1

Query: 238 SDSSRDGNSGSKKKQKWPTFNAGKSGSMLIKHLRPHSEKFADNSTVTSPRGSSADRKGLH 417
           S SS   +SGS    +  + +   S S         SE  +++ + +S   SS+D     
Sbjct: 151 SSSSESSSSGSSSSSESESGSESDSDSSSSSSSSSDSESDSESDSQSSSSSSSSDSS--- 207

Query: 418 SDDKLSRINCLNTSDSELNKSPDSMSVNAKDMKKTTCDLLNDDDSSAIKPRAYRSAFSFR 597
           SD   S  +  + SDS  + S  S   ++     +  D     DSS+    +   + S  
Sbjct: 208 SDSDSSSSDSSSDSDSSSSSSSSSSDSDSDSDSSSDSDSSGSSDSSSSSDSSSDESTSSD 267

Query: 598 LKRSKCDTKINTHCHSKSDEL----GVANSQPLSPGANTAPVSATSHKKK 735
              S  D+   +    ++ E       A   P S   +T   S++S   K
Sbjct: 268 SSDSDSDSDSGSSSELETKEATADESKAEETPASSNESTPSASSSSSANK 317

>sp|O15234|CASC3_HUMAN Cancer susceptibility candidate gene 3 protein (Metastatic lymph
           node protein 51) (MLN 51 protein) (Barentsz protein)
           (Btz)
          Length = 703

 Score = 34.7 bits (78), Expect = 0.41
 Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 14/144 (9%)
 Frame = +1

Query: 136 QRMQQDFLLALQDPKRFASKVDSGGKDSNFLKPVSDSSRDGNSGSKKKQKWPTFNAGKSG 315
           QR  QD     +D +  AS  DSGG         S S+  G SGS   Q+      G++G
Sbjct: 7   QRASQD----TEDEESGASGSDSGGSPLRGGGSCSGSAGGGGSGSLPSQR-----GGRTG 57

Query: 316 SMLIKHLRPHSEKFADNSTVTSPRGSSAD--------------RKGLHSDDKLSRINCLN 453
           ++ ++ +     K A+ S   S  G   D               +G +S+++ S++   +
Sbjct: 58  ALHLRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKS 117

Query: 454 TSDSELNKSPDSMSVNAKDMKKTT 525
            ++  +N S        K   K+T
Sbjct: 118 EANDAVNSSTKEEKGEEKPDTKST 141

>sp|P29148|Npre_PAEPO Bacillolysin precursor (Neutral protease)
          Length = 590

 Score = 34.3 bits (77), Expect = 0.54
 Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 1/162 (0%)
 Frame = +1

Query: 292 TFNAGKSGSMLIKHLRPHSEKFADNSTV-TSPRGSSADRKGLHSDDKLSRINCLNTSDSE 468
           T + GKSG +        +E   + +T  T+P+ S+++       +  +RI  L TSD  
Sbjct: 110 TIHVGKSGEVTSYLGAVINEDQQEEATQGTTPKISASEAVYTAYKEAAARIEALPTSDDT 169

Query: 469 LNKSPDSMSVNAKDMKKTTCDLLNDDDSSAIKPRAYRSAFSFRLKRSKCDTKINTHCHSK 648
           ++K  +  S  +KD   T  +  N+D + ++     +   S        D+KI      K
Sbjct: 170 ISKDAEEPSSVSKD---TYAEAANNDKTLSVD----KDELSLDKASVLKDSKIEAVEAEK 222

Query: 649 SDELGVANSQPLSPGANTAPVSATSHKKKGSNILHIFTSNRN 774
           S    +AN QP        P +   +  KG ++L ++ +  N
Sbjct: 223 SSIAKIANLQP-----EVDPKAELYYYPKGDDLLLVYVTEVN 259

>sp|Q6KI49|RS3_MYCMO 30S ribosomal protein S3
          Length = 225

 Score = 34.3 bits (77), Expect = 0.54
 Identities = 27/108 (25%), Positives = 54/108 (50%)
 Frame = +2

Query: 119 FNLGIFKECNKISY*HSKTRKDLLVKLILEEKIQIF*NQYQIHLVMEILALKRNKNGRLS 298
           F  G+ K+ N + Y   K   D+L++   ++KI  F N++    ++  + ++RN+NG LS
Sbjct: 10  FRYGVTKKHNTLWYADKKDFADILLQ---DDKIYRFFNKFTREYLIGKVEIRRNQNGHLS 66

Query: 299 MLEKVGVC*LNIYGHTVKNLPIIQQLPHPEEVARIEKDCTLMINYQEL 442
           +L            H+ K   I+ Q  + E + ++ +D   ++  +EL
Sbjct: 67  VLV-----------HSAKPGAILGQ--NGENINKLTQDIQKLLRNKEL 101

>sp|Q14669|TRI12_HUMAN Thyroid receptor interacting protein 12 (TRIP12)
          Length = 1992

 Score = 34.3 bits (77), Expect = 0.54
 Identities = 38/181 (20%), Positives = 75/181 (41%), Gaps = 1/181 (0%)
 Frame = +1

Query: 259 NSGSKKKQKWPTFNAGKSGSMLIKHLRPHSEKFADNSTVTSPRGSSADRKGLHSDDKLSR 438
           NS   K+   P +N   S S   K   P + +  ++ + T+   S + ++ L  + +L  
Sbjct: 68  NSRGVKRSASPDYNRTNSPSSAKK---PKALQHTESPSETNKPHSKSKKRHLDQEQQLKS 124

Query: 439 INCLNTSDSELNKSPDSMSVNAKDMKKTTCDLLNDDDSSAIKPRAYRSAFSFRLKRSKCD 618
               +TS +   KS  +    ++  K+T    +     S       RSA   +L  SK  
Sbjct: 125 AQSPSTSKAHTRKSGATGGSRSQKRKRTESSCVKSGSGSESTGAEERSAKPTKL-ASKSA 183

Query: 619 TKINTHCHSKSDELGVANSQPLSPGANTAPVSATSHKKKGSNILHIFTSNR-NKNKTPST 795
           T     C + +D    A++      +++A  SA+S    G+ +      N+  ++++ S+
Sbjct: 184 TSAKAGCSTITDSSSAASTS----SSSSAVASASSTVPPGARVKQGKDQNKARRSRSASS 239

Query: 796 P 798
           P
Sbjct: 240 P 240

>sp|P97399|DSPP_MOUSE Dentin sialophosphoprotein precursor (Dentin matrix protein 3)
            (DMP-3) [Contains: Dentin phosphoprotein (Dentin
            phosphophoryn) (DPP); Dentin sialoprotein (DSP)]
          Length = 934

 Score = 33.9 bits (76), Expect = 0.70
 Identities = 42/185 (22%), Positives = 76/185 (41%)
 Frame = +1

Query: 238  SDSSRDGNSGSKKKQKWPTFNAGKSGSMLIKHLRPHSEKFADNSTVTSPRGSSADRKGLH 417
            SDS+ DG+S S+ K +  + +   S        +  S   +D+S+ +S    S+D     
Sbjct: 515  SDSNGDGDSESEDKDESDSSDHDNSSD---SESKSDSSDSSDDSSDSSDSSDSSDSSDSS 571

Query: 418  SDDKLSRINCLNTSDSELNKSPDSMSVNAKDMKKTTCDLLNDDDSSAIKPRAYRSAFSFR 597
                 S  +  + S+S  + S  S S ++ D    TCD  +  DSS     +  S  S  
Sbjct: 572  DSSDSSDSSDSSDSNSSSDSSDSSGSSDSSD-SSDTCDSSDSSDSSDSSDSSDSSDSSDS 630

Query: 598  LKRSKCDTKINTHCHSKSDELGVANSQPLSPGANTAPVSATSHKKKGSNILHIFTSNRNK 777
               S  D+  ++   S SD    ++    S  ++++  S +S     S+     +SN + 
Sbjct: 631  SDSS--DSSDSSDSSSSSDSSDSSSCSDSSDSSDSSDSSDSSDSSDSSSSDSSSSSNSSD 688

Query: 778  NKTPS 792
            +   S
Sbjct: 689  SSDSS 693


 Score = 33.9 bits (76), Expect = 0.70
 Identities = 44/206 (21%), Positives = 77/206 (37%)
 Frame = +1

Query: 190  SKVDSGGKDSNFLKPVSDSSRDGNSGSKKKQKWPTFNAGKSGSMLIKHLRPHSEKFADNS 369
            S   SG  DS+      DSS   +S         + ++  S S             +D+S
Sbjct: 591  SSDSSGSSDSSDSSDTCDSSDSSDSSDSSDSSDSSDSSDSSDS----------SDSSDSS 640

Query: 370  TVTSPRGSSADRKGLHSDDKLSRINCLNTSDSELNKSPDSMSVNAKDMKKTTCDLLNDDD 549
              +S   SS       S D     +  ++SDS  + S DS S +       + D  +  D
Sbjct: 641  DSSSSSDSSDSSSCSDSSDSSDSSDSSDSSDSSDSSSSDSSSSSNSSDSSDSSDSSSSSD 700

Query: 550  SSAIKPRAYRSAFSFRLKRSKCDTKINTHCHSKSDELGVANSQPLSPGANTAPVSATSHK 729
            SS     +  S  S     S  D+  ++   S SD    ++S   S  ++++  S +S  
Sbjct: 701  SSDSSDSSDSSDSSGSSDSS--DSSASSDSSSSSDSSDSSSSSDSSDSSDSSDSSDSSES 758

Query: 730  KKGSNILHIFTSNRNKNKTPSTPQNN 807
               SN      S+ + + + S+  ++
Sbjct: 759  SDSSNSSDSSDSSDSSDSSDSSDSSD 784

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,190,778
Number of Sequences: 369166
Number of extensions: 1960819
Number of successful extensions: 5337
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5308
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 10048372950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00063

Planaria EST Database

DrC_00063

BLASTX 2.2.13 [Nov-27-2005]

Cluster detail