Planaria EST Database

DrC_00051

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00051
         (722 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O95995|GAS8_HUMAN  Growth-arrest-specific protein 8 (Grow...   283   3e-76
sp|Q60779|GAS8_MOUSE  Growth-arrest-specific protein 8 (Grow...   272   6e-73
sp|Q8MT08|GAS8_DROME  Growth-arrest-specific protein 8 homolog    147   4e-35
sp|O15697|GAS8_TRYBR  Trypanin (T lymphocyte-triggering fact...    98   2e-20
sp|Q91ZU8|BPAEA_MOUSE  Bullous pemphigoid antigen 1, isoform...    57   4e-08
sp|Q9JIR0|RIMB1_RAT  Peripheral-type benzodiazepine receptor...    50   6e-06
sp|Q8VDD5|MYH9_MOUSE  Myosin-9 (Myosin heavy chain, nonmuscl...    50   8e-06
sp|Q9NQX4|MYO5C_HUMAN  Myosin-5C (Myosin Vc)                       49   1e-05
sp|P14105|MYH9_CHICK  Myosin-9 (Myosin heavy chain, nonmuscl...    49   2e-05
sp|Q62812|MYH9_RAT  Myosin-9 (Myosin heavy chain, nonmuscle ...    49   2e-05

>sp|O95995|GAS8_HUMAN Growth-arrest-specific protein 8 (Growth arrest-specific 11)
          Length = 478

 Score =  283 bits (724), Expect = 3e-76
 Identities = 139/201 (69%), Positives = 169/201 (84%)
 Frame = +2

Query: 2   KRLVEPLRKAQEENSELKRQLTNYEKDKLALKNTKARLKIKEKEYRDLEWEHEVLEQRFS 181
           KRL +PL+KA+EE SE+++QL NYE+DK  L  TKARLK++EKE +DL+WEHEVLEQRF+
Sbjct: 277 KRLADPLQKAREEMSEMQKQLANYERDKQILLCTKARLKVREKELKDLQWEHEVLEQRFT 336

Query: 182 KVEEERDQLYNKFVKAIHEVQQKSGLKNVLLERKLNTLTESLEKKEAQLNEVLSASNLDP 361
           KV++ERD+LY KF  AI EVQQK+G KN++LERKL  L+ ++EKKE Q NEVL+ASNLDP
Sbjct: 337 KVQQERDELYRKFTAAIQEVQQKTGFKNLVLERKLQALSAAVEKKEVQFNEVLAASNLDP 396

Query: 362 NALAIVTRKLEDVLDSKNSAIKDLQYELARVCKAHNDQLRTYEAKLSQFGIPSEELGFKP 541
            AL +V+RKLEDVL+SKNS IKDLQYELA+VCKAHND LRTYEAKL  FGIP + +GFKP
Sbjct: 397 AALTLVSRKLEDVLESKNSTIKDLQYELAQVCKAHNDLLRTYEAKLLAFGIPLDNVGFKP 456

Query: 542 LESTVGNQSLGYGPAGLVSAP 604
           LE+ V  Q+LG GPAGLV  P
Sbjct: 457 LETAVIGQTLGQGPAGLVGTP 477

>sp|Q60779|GAS8_MOUSE Growth-arrest-specific protein 8 (Growth arrest-specific 11)
          Length = 478

 Score =  272 bits (696), Expect = 6e-73
 Identities = 133/201 (66%), Positives = 167/201 (83%)
 Frame = +2

Query: 2   KRLVEPLRKAQEENSELKRQLTNYEKDKLALKNTKARLKIKEKEYRDLEWEHEVLEQRFS 181
           +RL +PL+KA++E +E++++L N+E+DK  L  TKARLK+ E+E +DL+WEHEVLEQRF 
Sbjct: 277 RRLADPLQKAKDEMNEMQKRLGNHERDKQILVCTKARLKVAERELKDLKWEHEVLEQRFI 336

Query: 182 KVEEERDQLYNKFVKAIHEVQQKSGLKNVLLERKLNTLTESLEKKEAQLNEVLSASNLDP 361
           KV++ER++LY KF  AI EVQQK+G KN+LLERKL  L  ++EK+E Q NEVL+ASNLDP
Sbjct: 337 KVQQEREELYRKFADAIQEVQQKTGFKNLLLERKLQALNAAVEKREVQFNEVLAASNLDP 396

Query: 362 NALAIVTRKLEDVLDSKNSAIKDLQYELARVCKAHNDQLRTYEAKLSQFGIPSEELGFKP 541
            AL +V+RKLEDVL+SKN+ IKDLQYELARVCKAHND LRTYEAKL  FGIP + +GFKP
Sbjct: 397 TALTLVSRKLEDVLESKNTTIKDLQYELARVCKAHNDLLRTYEAKLLAFGIPLDNVGFKP 456

Query: 542 LESTVGNQSLGYGPAGLVSAP 604
           LE+ V  Q+LG GPAGLV AP
Sbjct: 457 LETAVIGQTLGQGPAGLVGAP 477

>sp|Q8MT08|GAS8_DROME Growth-arrest-specific protein 8 homolog
          Length = 479

 Score =  147 bits (370), Expect = 4e-35
 Identities = 83/201 (41%), Positives = 120/201 (59%), Gaps = 2/201 (0%)
 Frame = +2

Query: 2   KRLVEPLRKAQEENSELKRQLTNYEKDKLALKNTKARLKIKEKEYRDLEWEHEVLEQRFS 181
           +RL EPL  A  + +E +R+L  YE+DK  L   K R    EK+ + L WE E L  R  
Sbjct: 277 RRLKEPLEHANIQLNEYRRKLEFYERDKQQLSRLKTRNTRLEKKVKGLTWEAETLILRND 336

Query: 182 KVEEERDQLYNKFVKAIHEVQQKSGLKNVLLERKLNTLTESLEKKEAQLNEVLS--ASNL 355
            +  ER+ L  +F   I E+QQK+GLKNVLLERK+  L    EK+   L+E ++  A N 
Sbjct: 337 SLVAEREGLKERFNDVIVELQQKTGLKNVLLERKIAALMREDEKRSIVLHETIATCAPNF 396

Query: 356 DPNALAIVTRKLEDVLDSKNSAIKDLQYELARVCKAHNDQLRTYEAKLSQFGIPSEELGF 535
               L  +  ++ +++D KN  I DL+YE+ +  KAH+D L TYE KL Q+G+P++ELGF
Sbjct: 397 -AEKLTSLDERVGNIIDEKNKIILDLRYEVTKARKAHDDLLETYECKLKQYGVPTDELGF 455

Query: 536 KPLESTVGNQSLGYGPAGLVS 598
           KP+ +    Q    GPAG+++
Sbjct: 456 KPIRNRDQQQLYVCGPAGIIT 476

>sp|O15697|GAS8_TRYBR Trypanin (T lymphocyte-triggering factor) (TLTF)
          Length = 453

 Score = 98.2 bits (243), Expect = 2e-20
 Identities = 56/173 (32%), Positives = 97/173 (56%)
 Frame = +2

Query: 2   KRLVEPLRKAQEENSELKRQLTNYEKDKLALKNTKARLKIKEKEYRDLEWEHEVLEQRFS 181
           + LV PL +AQ E +EL+++    E++K  L+ T+ +L+   +E R    EH+ LE+R++
Sbjct: 274 QNLVAPLEEAQREVAELQQKRKQNEQNKRGLEVTRVKLRSLREEIRRQREEHQALEERYA 333

Query: 182 KVEEERDQLYNKFVKAIHEVQQKSGLKNVLLERKLNTLTESLEKKEAQLNEVLSASNLDP 361
            V  ER++L  KF  A+ +       +N +L++KL      +E+++ QL  VL A NL+P
Sbjct: 334 CVHREREELKGKFESALRQAVMVVEERNEVLQQKLIESHALVEERDVQLEGVLRAMNLEP 393

Query: 362 NALAIVTRKLEDVLDSKNSAIKDLQYELARVCKAHNDQLRTYEAKLSQFGIPS 520
             L ++  ++++ L  KN  IKDL +EL +  K ++  L   E +     I S
Sbjct: 394 KTLELIATEVDEWLQRKNQLIKDLHFELKKGEKLYSATLLEMERRCQTANIAS 446

>sp|Q91ZU8|BPAEA_MOUSE Bullous pemphigoid antigen 1, isoform 5 (BPA) (Hemidesmosomal plaque
            protein) (Dystonia musculorum protein) (Dystonin)
          Length = 2611

 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 51/182 (28%), Positives = 93/182 (51%), Gaps = 6/182 (3%)
 Frame = +2

Query: 2    KRLVEPLRKAQEENSELKRQLTNYEKDKLALKNTKARLKIKEKEYRDLEWEHEVLEQRFS 181
            + LVE L++ ++   EL R +   E+D LA +   A  ++KEK+  +LE   ++ E +FS
Sbjct: 1242 RALVEELQRKRDHEEELLRLVKQMERD-LAFQKQVAEKQLKEKQKVELEARRKITEIQFS 1300

Query: 182  KVEEERDQLYNKFVKAIHEVQQKSGLKNVLLERKLNTLTESLEKKEAQLNEV---LSASN 352
              E       +  V      +++   K   L+++++ LT +  K E ++ E+   LSA  
Sbjct: 1301 CRE-------SAAVAQARPQREQGRQKEEELKQQVDELTLANRKAEKEMRELKYELSAVQ 1353

Query: 353  LDPNALAIVTRKLEDVLDSKNSAIKDLQYELARVCKA---HNDQLRTYEAKLSQFGIPSE 523
            L+  +     R L+D LD  N+ +K L+ +L R  +A   ++ QLR    +L+Q    +E
Sbjct: 1354 LEKASSEEKARLLKDKLDETNNTLKCLKEDLERKDQAQERYSQQLRDLGGQLNQTTDKAE 1413

Query: 524  EL 529
            E+
Sbjct: 1414 EV 1415


 Score = 38.5 bits (88), Expect = 0.018
 Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 10/163 (6%)
 Frame = +2

Query: 23   RKAQEENSELKRQLTNYEKDKLALKNTKARLKIKEKE--------YRDLEWEHEVLEQRF 178
            RKA++E  ELK +L+  + +K + +     LK K  E          DLE + +  E+  
Sbjct: 1336 RKAEKEMRELKYELSAVQLEKASSEEKARLLKDKLDETNNTLKCLKEDLERKDQAQERYS 1395

Query: 179  SKVEEERDQLYNKFVKAIHEVQQKSGLKNV--LLERKLNTLTESLEKKEAQLNEVLSASN 352
             ++ +   QL     KA    Q+ + LK +    + +L +L +   K + +++ V  A  
Sbjct: 1396 QQLRDLGGQLNQTTDKAEEVRQEANDLKKIKHTYQLELESLHQEKGKLQREVDRVTRAHA 1455

Query: 353  LDPNALAIVTRKLEDVLDSKNSAIKDLQYELARVCKAHNDQLR 481
            L    +  +  ++    D      KDL  E  R+C+  +D L+
Sbjct: 1456 LAERNIQCLNSQVHASRDE-----KDLSEERRRLCQRKSDHLK 1493


 Score = 36.2 bits (82), Expect = 0.091
 Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 8/153 (5%)
 Frame = +2

Query: 8    LVEPLRKAQEENSELKRQLTNYEKDKLALKNTKARL-----KIKEKEYRDLEWEHEVLEQ 172
            L++  R    ENS+L  +++  E     LK  K+R+     K+KE    +L  +   +E 
Sbjct: 1093 LLQRQRATMVENSKLTGKISELETMVAELKKQKSRVEEELPKVKEAAENELRKQQRNVED 1152

Query: 173  ---RFSKVEEERDQLYNKFVKAIHEVQQKSGLKNVLLERKLNTLTESLEKKEAQLNEVLS 343
               +  + E E  Q Y + ++ I  V++K   +  L   ++  LT   E + A + E L 
Sbjct: 1153 IALQKLRAESEAKQ-YRRELETI--VREKEAAEREL--ERVRQLTAEAEARRAAVEENLR 1207

Query: 344  ASNLDPNALAIVTRKLEDVLDSKNSAIKDLQYE 442
                         + LED L  K+S++ DL+ +
Sbjct: 1208 NFRSQLQENTFTRQTLEDHLRRKDSSLSDLEQQ 1240


 Score = 34.3 bits (77), Expect = 0.35
 Identities = 31/149 (20%), Positives = 67/149 (44%)
 Frame = +2

Query: 26   KAQEENSELKRQLTNYEKDKLALKNTKARLKIKEKEYRDLEWEHEVLEQRFSKVEEERDQ 205
            + ++E ++LK+    Y+ +  +L   K +L   ++E   +   H + E+          Q
Sbjct: 1414 EVRQEANDLKKIKHTYQLELESLHQEKGKL---QREVDRVTRAHALAERNI--------Q 1462

Query: 206  LYNKFVKAIHEVQQKSGLKNVLLERKLNTLTESLEKKEAQLNEVLSASNLDPNALAIVTR 385
              N  V A  + +  S  +  L +RK + L E  E+  AQL + + A   + + +    +
Sbjct: 1463 CLNSQVHASRDEKDLSEERRRLCQRKSDHLKEEFERSHAQLLQNIQAEKENNDKI----Q 1518

Query: 386  KLEDVLDSKNSAIKDLQYELARVCKAHND 472
            KL   L+  N   + L+ ++  + + +N+
Sbjct: 1519 KLNKELEKSNECAETLKQKVDELTRQNNE 1547

>sp|Q9JIR0|RIMB1_RAT Peripheral-type benzodiazepine receptor-associated protein 1
           (PRAX-1) (RIM binding protein 1) (RIM-BP1)
          Length = 1847

 Score = 50.1 bits (118), Expect = 6e-06
 Identities = 46/201 (22%), Positives = 83/201 (41%), Gaps = 9/201 (4%)
 Frame = +2

Query: 8   LVEPLRKAQEENSELKRQLTNYEKDKLALKNTKARLKIKEKEYRDLEWEHEVLEQRFSKV 187
           L +  RK Q    EL+ QL   + +   L    +RL  K  E   +EWE+  L+ +   V
Sbjct: 351 LEQEARKKQRRCEELELQLRAAQNENARLVEENSRLSGKATEKEQVEWENAELKGQLLGV 410

Query: 188 EEERDQLYNK---------FVKAIHEVQQKSGLKNVLLERKLNTLTESLEKKEAQLNEVL 340
            +ERD    K          ++ + E  +K   +   LE +      SL++K+ ++  + 
Sbjct: 411 TQERDSALRKSQGLQSKLESLEQVLEHMRKVAQRRQQLEEEHEQARLSLQEKQEEVRRLQ 470

Query: 341 SASNLDPNALAIVTRKLEDVLDSKNSAIKDLQYELARVCKAHNDQLRTYEAKLSQFGIPS 520
            A            + LE  LDS  + +++L+ +    C++  ++      +L  F +  
Sbjct: 471 QAQAEAKREHEGAVQLLESTLDSMQARVRELEGQ----CRSQTERFSLLAQELQAFRLHP 526

Query: 521 EELGFKPLESTVGNQSLGYGP 583
             L    L S +G  +LG  P
Sbjct: 527 GPLDL--LTSALGCNALGDHP 545

>sp|Q8VDD5|MYH9_MOUSE Myosin-9 (Myosin heavy chain, nonmuscle IIa) (Nonmuscle myosin heavy
            chain IIa) (NMMHC II-a) (NMMHC-IIA) (Cellular myosin
            heavy chain, type A) (Nonmuscle myosin heavy chain-A)
            (NMMHC-A)
          Length = 1960

 Score = 49.7 bits (117), Expect = 8e-06
 Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 5/171 (2%)
 Frame = +2

Query: 8    LVEPLRKAQEENSELKRQLTNYEKDKLALKNTKARLKIKEKEYR-DLEWEHEVLEQRFSK 184
            L E LR+ +++  EL++     E D   L +  A L+ +  E +  L  + E L+   ++
Sbjct: 1032 LEERLRREEKQRQELEKTRRKLEGDSTDLSDQIAELQAQIAELKMQLAKKEEELQAALAR 1091

Query: 185  VEEERDQLYNKFVKAIHEVQQKSGLKNVLLERKLNTLTESLEKKEAQLNEVLSASNLDPN 364
            VEEE  Q  N  +K I E           LE +++ L E LE + A  N+          
Sbjct: 1092 VEEEAAQK-NMALKKIRE-----------LETQISELQEDLESERASRNKAEKQKRDLGE 1139

Query: 365  ALAIVTRKLEDVLDSKNSAIKDL----QYELARVCKAHNDQLRTYEAKLSQ 505
             L  +  +LED LDS  +A ++L    + E++ + K   D+ +T+EA++ +
Sbjct: 1140 ELEALKTELEDTLDS-TAAQQELRSKREQEVSILKKTLEDEAKTHEAQIQE 1189


 Score = 38.1 bits (87), Expect = 0.024
 Identities = 42/183 (22%), Positives = 84/183 (45%), Gaps = 18/183 (9%)
 Frame = +2

Query: 11   VEPLRKAQEENSELKRQLTNYEKDKLAL----KNTKARLKIKEKEYRDLEWEHEVLEQRF 178
            ++ LRK Q +  +  R+L +    +  +    K  + +LK  E E   L+ E    E+  
Sbjct: 1637 IKQLRKLQAQMKDCMRELDDTRASREEILAQAKENEKKLKSMEAEMIQLQEELAAAERAK 1696

Query: 179  SKVEEERDQLYNKFV----KAIHEVQQKSGL--KNVLLERKL-----NT--LTESLEKKE 319
             + ++ERD+L ++      K    +++K  L  +  LLE +L     NT  + + L+K  
Sbjct: 1697 RQAQQERDELADEIANSSGKGALALEEKRRLEARIALLEEELEEEQGNTELINDRLKKAN 1756

Query: 320  AQLNEVLSASNLDPNALAIVTRKLEDVLDSKNSAIKDLQYELARVCKA-HNDQLRTYEAK 496
             Q++++ +  NL+  + A         L+ +N  +K    E+    K+ +   +   EAK
Sbjct: 1757 LQIDQINTDLNLE-RSHAQKNENARQQLERQNKELKAKLQEMESAVKSKYKASIAALEAK 1815

Query: 497  LSQ 505
            ++Q
Sbjct: 1816 IAQ 1818

>sp|Q9NQX4|MYO5C_HUMAN Myosin-5C (Myosin Vc)
          Length = 1742

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 37/156 (23%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
 Frame = +2

Query: 23   RKAQEENSELKRQLTNYEKDKLALKNTKARLKIKEKEYRDLEWE-HEVLEQRFSKVEEER 199
            R+  + N  ++ ++T    + + + + K ++   EK+ +DLE   +E  E+   K+EE  
Sbjct: 1188 REENDINESIRHEVTRLTSENMMIPDFKQQISELEKQKQDLEIRLNEQAEKMKGKLEELS 1247

Query: 200  DQLY---------NKFVKAIHEVQQKSGLKNVLLERKLNTLTESLEKKEAQLNEVLSASN 352
            +QL+          K ++A +E+  K   K +   +++   ++ L+K+    +EV     
Sbjct: 1248 NQLHRSQEEEGTQRKALEAQNEIHTKEKEKLIDKIQEMQEASDHLKKQFETESEVKCNFR 1307

Query: 353  LDPNALAIVTRKLEDVLDSKNSAIKDLQYELARVCK 460
             + + L +  R LE+ LD K+  IK LQ ++  + K
Sbjct: 1308 QEASRLTLENRDLEEELDMKDRVIKKLQDQVKTLSK 1343

>sp|P14105|MYH9_CHICK Myosin-9 (Myosin heavy chain, nonmuscle IIa) (Nonmuscle myosin heavy
            chain IIa) (NMMHC II-a) (NMMHC-IIA) (Cellular myosin
            heavy chain, type A) (Nonmuscle myosin heavy chain-A)
            (NMMHC-A)
          Length = 1959

 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 5/171 (2%)
 Frame = +2

Query: 8    LVEPLRKAQEENSELKRQLTNYEKDKLALKNTKARLKIKEKEYR-DLEWEHEVLEQRFSK 184
            L E LR+ +++  EL++     E D   L +  A L+ +  E +  L  + E L+   ++
Sbjct: 1032 LEERLRREEKQRQELEKTRRKLEGDSSDLHDQIAELQAQIAELKIQLSKKEEELQAALAR 1091

Query: 185  VEEERDQLYNKFVKAIHEVQQKSGLKNVLLERKLNTLTESLEKKEAQLNEVLSASNLDPN 364
            VEEE  Q  N  +K I E           LE ++  L E LE + A  N+          
Sbjct: 1092 VEEEAAQK-NMALKKIRE-----------LESQITELQEDLESERASRNKAEKQKRDLGE 1139

Query: 365  ALAIVTRKLEDVLDSKNSAIKDL----QYELARVCKAHNDQLRTYEAKLSQ 505
             L  +  +LED LDS  +A ++L    + E+  + K   D+ +T+EA++ +
Sbjct: 1140 ELEALKTELEDTLDS-TAAQQELRSKREQEVTVLKKTLEDEAKTHEAQIQE 1189


 Score = 36.6 bits (83), Expect = 0.070
 Identities = 47/190 (24%), Positives = 82/190 (43%), Gaps = 25/190 (13%)
 Frame = +2

Query: 11   VEPLRKAQEENSELKRQL----TNYEKDKLALKNTKARLKIKEKEYRDLEWEHEVLEQRF 178
            ++ +RK Q +  +  R+L    T+ E+     K  + +LK  E E   L+ E    E+  
Sbjct: 1637 IKHVRKLQAQMKDYMRELEDTRTSREEILAQAKENEKKLKSMEAEMIQLQEELAAAERAK 1696

Query: 179  SKVEEERDQLYNKFVKAIHEVQQKSGLKNVL-------LERKLNTLTESLEKKEAQ---L 328
             + ++ERD+L +       E+   SG K  L       LE ++  L E LE+++     +
Sbjct: 1697 RQAQQERDELAD-------EIANSSG-KGALAMEEKRRLEARIAQLEEELEEEQGNTEII 1748

Query: 329  NEVLSASNL-------DPNALAIVTRKLEDVLDSKNSAIKDLQYEL----ARVCKAHNDQ 475
            N+ L  +NL       D NA     +K E+         K+L+ +L    + V   +   
Sbjct: 1749 NDRLKKANLQIDQMNADLNAERSNAQKNENARQQMERQNKELKLKLQEMESAVKSKYKAT 1808

Query: 476  LRTYEAKLSQ 505
            +   EAK+ Q
Sbjct: 1809 ITALEAKIVQ 1818


 Score = 30.0 bits (66), Expect = 6.5
 Identities = 38/174 (21%), Positives = 70/174 (40%), Gaps = 10/174 (5%)
 Frame = +2

Query: 38   ENSELKRQLTNYEKDKLALKNTKARLKIKEKEYR----DLEWEHEVLEQRFSKVEEERDQ 205
            E  +L+ QL    +     +  +ARL  K++E      DLE   E  E+R   ++ E+ +
Sbjct: 881  EKMQLQEQLQAEAELCAEAEEIRARLTAKKQELEEICHDLEARVEEEEERCQHLQAEKKK 940

Query: 206  LYNKFVKAIHEVQ------QKSGLKNVLLERKLNTLTESLEKKEAQLNEVLSASNLDPNA 367
            +     +   +++      QK  L+ V  E KL  L E +   E Q  ++     L  + 
Sbjct: 941  MQQNIQELEEQLEEEESARQKLQLEKVTTEAKLKKLEEDVIVLEDQNLKLAKEKKLLEDR 1000

Query: 368  LAIVTRKLEDVLDSKNSAIKDLQYELARVCKAHNDQLRTYEAKLSQFGIPSEEL 529
            ++  T  L +  +   S        LA++   H   +   E +L +     +EL
Sbjct: 1001 MSEFTTNLTEEEEKSKS--------LAKLKNKHEAMITDLEERLRREEKQRQEL 1046

>sp|Q62812|MYH9_RAT Myosin-9 (Myosin heavy chain, nonmuscle IIa) (Nonmuscle myosin heavy
            chain IIa) (NMMHC II-a) (NMMHC-IIA) (Cellular myosin
            heavy chain, type A) (Nonmuscle myosin heavy chain-A)
            (NMMHC-A)
          Length = 1961

 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 5/171 (2%)
 Frame = +2

Query: 8    LVEPLRKAQEENSELKRQLTNYEKDKLALKNTKARLKIKEKEYR-DLEWEHEVLEQRFSK 184
            L E LR+ +++  EL++     E D   L +  A L+ +  E +  L  + E L+   ++
Sbjct: 1032 LEERLRREEKQRQELEKTRRKLEGDSTDLSDQIAELQAQIAELKMQLAKKEEELQAALAR 1091

Query: 185  VEEERDQLYNKFVKAIHEVQQKSGLKNVLLERKLNTLTESLEKKEAQLNEVLSASNLDPN 364
            VEEE  Q  N  +K I E           LE +++ L E LE + A  N+          
Sbjct: 1092 VEEEAAQK-NMALKKIRE-----------LETQISELQEDLESERACRNKAEKQKRDLGE 1139

Query: 365  ALAIVTRKLEDVLDSKNSAIKDL----QYELARVCKAHNDQLRTYEAKLSQ 505
             L  +  +LED LDS  +A ++L    + E++ + K   D+ +T+EA++ +
Sbjct: 1140 ELEALKTELEDTLDS-TAAQQELRSKREQEVSILKKTLEDEAKTHEAQIQE 1189


 Score = 36.6 bits (83), Expect = 0.070
 Identities = 41/183 (22%), Positives = 84/183 (45%), Gaps = 18/183 (9%)
 Frame = +2

Query: 11   VEPLRKAQEENSELKRQLTNYEKDKLAL----KNTKARLKIKEKEYRDLEWEHEVLEQRF 178
            ++ LRK Q +  +  R + +    +  +    K  + +LK  E E   L+ E    E+  
Sbjct: 1638 IKQLRKLQAQMKDCMRDVDDTRASREEILAQAKENEKKLKSMEAEMIQLQEELAAAERAK 1697

Query: 179  SKVEEERDQLYNKFV----KAIHEVQQKSGLKNV--LLERKL-----NT--LTESLEKKE 319
             + ++ERD+L ++      K    +++K  L+ +  LLE +L     NT  + + L+K  
Sbjct: 1698 RQAQQERDELADEIANSSGKGALALEEKRRLEALIALLEEELEEEQGNTELINDRLKKAN 1757

Query: 320  AQLNEVLSASNLDPNALAIVTRKLEDVLDSKNSAIKDLQYELARVCKA-HNDQLRTYEAK 496
             Q++++ +  NL+  + A         L+ +N  +K    E+    K+ +   +   EAK
Sbjct: 1758 LQIDQINTDLNLE-RSHAQKNENARQQLERQNKELKAKLQEMESAVKSKYKASIAALEAK 1816

Query: 497  LSQ 505
            ++Q
Sbjct: 1817 IAQ 1819

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,867,627
Number of Sequences: 369166
Number of extensions: 1471395
Number of successful extensions: 6507
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6355
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 6462248555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00051

  1. Dr_sW_002_D08
  2. Dr_sW_021_P03