Planaria EST Database

DrC_00037

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00037
         (871 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P18687|CH60_CRIGR  60 kDa heat shock protein, mitochondri...   279   6e-75
sp|P63039|CH60_RAT  60 kDa heat shock protein, mitochondrial...   276   5e-74
sp|P10809|CH60_HUMAN  60 kDa heat shock protein, mitochondri...   275   2e-73
sp|Q9VMN5|CH60C_DROME  Probable 60 kDa heat shock protein ho...   273   5e-73
sp|Q5NVM5|CH60_PONPY  60 kDa heat shock protein, mitochondri...   272   1e-72
sp|O02649|CH60_DROME  60 kDa heat shock protein, mitochondri...   266   6e-71
sp|P25420|CH63_HELVI  63 kDa chaperonin, mitochondrial precu...   257   3e-68
sp|P50140|CH60_CAEEL  Chaperonin homolog HSP60, mitochondria...   250   3e-66
sp|Q05046|CH62_CUCMA  Chaperonin CPN60-2, mitochondrial prec...   244   2e-64
sp|P29197|CH60_ARATH  Chaperonin CPN60, mitochondrial precur...   241   2e-63

>sp|P18687|CH60_CRIGR 60 kDa heat shock protein, mitochondrial precursor (Hsp60) (60 kDa
            chaperonin) (CPN60) (Heat shock protein 60) (HSP-60)
            (Mitochondrial matrix protein P1)
          Length = 573

 Score =  279 bits (714), Expect = 6e-75
 Identities = 145/290 (50%), Positives = 198/290 (68%), Gaps = 1/290 (0%)
 Frame = +3

Query: 3    NVLSLVPVLELINSQQLPLLIIAEDVDSEXXXXXXXXXXXXXXQICAVKAPGFGDNRIEI 182
            +V S+VP LE+ N+ + PL+IIAEDVD E              Q+ AVKAPGFGDNR   
Sbjct: 253  SVQSIVPALEIANAHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAVKAPGFGDNRKNQ 312

Query: 183  LQDIATSTGAFLFGSEEETIQMEDMVLEHLGRAKEICVSRDDTLIVGGNGTLEKIQRRIE 362
            L+D+A +TG  +FG E   + +ED+    LG+  E+ V++DD +++ G G   +I++RI+
Sbjct: 313  LKDMAIATGGAVFGEEGLNLNLEDVQAHDLGKVGEVIVTKDDAMLLKGKGEKAQIEKRIQ 372

Query: 363  MLEDQLQIVTSNYERERVKERLSKLSDGVAVIKVGGSSEVEVNERTDRYXXXXXXXXXXX 542
             + +QL+I TS YE+E++ ERL+KLSDGVAV+KVGG+S+VEVNE+ DR            
Sbjct: 373  EITEQLEITTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDRVTDALNATRAAV 432

Query: 543  XEGIVVGGGLALLRCIPVLDVLNVSG-DEQIGLEVMKTALQSPCYTIATNAGINGDIVVD 719
             EGIV+GGG ALLRCIP LD L  S  D++IG+E++K AL+ P  TIA NAG+ G ++V+
Sbjct: 433  EEGIVLGGGCALLRCIPALDSLKPSNEDQKIGIEIIKRALKIPAMTIAKNAGVEGSLIVE 492

Query: 720  KLLKLDGNIGYDAFNDEYVDMFESGIIDPVKVVRTALTDAARAASLLITS 869
            K+L+    IGYDA   ++V+M E GIIDP KVVRTAL DAA  ASLL T+
Sbjct: 493  KILQSSSEIGYDAMLGDFVNMVEKGIIDPTKVVRTALLDAAGVASLLTTA 542

>sp|P63039|CH60_RAT 60 kDa heat shock protein, mitochondrial precursor (Hsp60) (60 kDa
            chaperonin) (CPN60) (Heat shock protein 60) (HSP-60)
            (Mitochondrial matrix protein P1) (HSP-65)
 sp|P63038|CH60_MOUSE 60 kDa heat shock protein, mitochondrial precursor (Hsp60) (60 kDa
            chaperonin) (CPN60) (Heat shock protein 60) (HSP-60)
            (Mitochondrial matrix protein P1) (HSP-65)
          Length = 573

 Score =  276 bits (706), Expect = 5e-74
 Identities = 143/290 (49%), Positives = 196/290 (67%), Gaps = 1/290 (0%)
 Frame = +3

Query: 3    NVLSLVPVLELINSQQLPLLIIAEDVDSEXXXXXXXXXXXXXXQICAVKAPGFGDNRIEI 182
            +V S+VP LE+ N+ + PL+IIAEDVD E              Q+ AVKAPGFGDNR   
Sbjct: 253  SVQSIVPALEIANAHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAVKAPGFGDNRKNQ 312

Query: 183  LQDIATSTGAFLFGSEEETIQMEDMVLEHLGRAKEICVSRDDTLIVGGNGTLEKIQRRIE 362
            L+D+A +TG  +FG E   + +ED+    LG+  E+ V++DD +++ G G    I++RI+
Sbjct: 313  LKDMAIATGGAVFGEEGLNLNLEDVQAHDLGKVGEVIVTKDDAMLLKGKGDKAHIEKRIQ 372

Query: 363  MLEDQLQIVTSNYERERVKERLSKLSDGVAVIKVGGSSEVEVNERTDRYXXXXXXXXXXX 542
             + +QL I TS YE+E++ ERL+KLSDGVAV+KVGG+S+VEVNE+ DR            
Sbjct: 373  EITEQLDITTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDRVTDALNATRAAV 432

Query: 543  XEGIVVGGGLALLRCIPVLDVLN-VSGDEQIGLEVMKTALQSPCYTIATNAGINGDIVVD 719
             EGIV+GGG ALLRCIP LD L   + D++IG+E++K AL+ P  TIA NAG+ G ++V+
Sbjct: 433  EEGIVLGGGCALLRCIPALDSLKPANEDQKIGIEIIKRALKIPAMTIAKNAGVEGSLIVE 492

Query: 720  KLLKLDGNIGYDAFNDEYVDMFESGIIDPVKVVRTALTDAARAASLLITS 869
            K+L+    +GYDA   ++V+M E GIIDP KVVRTAL DAA  ASLL T+
Sbjct: 493  KILQSSSEVGYDAMLGDFVNMVEKGIIDPTKVVRTALLDAAGVASLLTTA 542

>sp|P10809|CH60_HUMAN 60 kDa heat shock protein, mitochondrial precursor (Hsp60) (60 kDa
            chaperonin) (CPN60) (Heat shock protein 60) (HSP-60)
            (Mitochondrial matrix protein P1) (P60 lymphocyte
            protein) (HuCHA60)
          Length = 573

 Score =  275 bits (702), Expect = 2e-73
 Identities = 140/290 (48%), Positives = 197/290 (67%), Gaps = 1/290 (0%)
 Frame = +3

Query: 3    NVLSLVPVLELINSQQLPLLIIAEDVDSEXXXXXXXXXXXXXXQICAVKAPGFGDNRIEI 182
            ++ S+VP LE+ N+ + PL+IIAEDVD E              Q+ AVKAPGFGDNR   
Sbjct: 253  SIQSIVPALEIANAHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAVKAPGFGDNRKNQ 312

Query: 183  LQDIATSTGAFLFGSEEETIQMEDMVLEHLGRAKEICVSRDDTLIVGGNGTLEKIQRRIE 362
            L+D+A +TG  +FG E  T+ +ED+    LG+  E+ V++DD +++ G G   +I++RI+
Sbjct: 313  LKDMAIATGGAVFGEEGLTLNLEDVQPHDLGKVGEVIVTKDDAMLLKGKGDKAQIEKRIQ 372

Query: 363  MLEDQLQIVTSNYERERVKERLSKLSDGVAVIKVGGSSEVEVNERTDRYXXXXXXXXXXX 542
             + +QL + TS YE+E++ ERL+KLSDGVAV+KVGG+S+VEVNE+ DR            
Sbjct: 373  EIIEQLDVTTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDRVTDALNATRAAV 432

Query: 543  XEGIVVGGGLALLRCIPVLDVLN-VSGDEQIGLEVMKTALQSPCYTIATNAGINGDIVVD 719
             EGIV+GGG ALLRCIP LD L   + D++IG+E++K  L+ P  TIA NAG+ G ++V+
Sbjct: 433  EEGIVLGGGCALLRCIPALDSLTPANEDQKIGIEIIKRTLKIPAMTIAKNAGVEGSLIVE 492

Query: 720  KLLKLDGNIGYDAFNDEYVDMFESGIIDPVKVVRTALTDAARAASLLITS 869
            K+++    +GYDA   ++V+M E GIIDP KVVRTAL DAA  ASLL T+
Sbjct: 493  KIMQSSSEVGYDAMAGDFVNMVEKGIIDPTKVVRTALLDAAGVASLLTTA 542

>sp|Q9VMN5|CH60C_DROME Probable 60 kDa heat shock protein homolog 2, mitochondrial precursor
            (Hsp60) (60 kDa chaperonin) (CPN60) (Heat shock protein
            60) (HSP-60)
          Length = 576

 Score =  273 bits (698), Expect = 5e-73
 Identities = 139/287 (48%), Positives = 199/287 (69%), Gaps = 1/287 (0%)
 Frame = +3

Query: 12   SLVPVLELINSQQLPLLIIAEDVDSEXXXXXXXXXXXXXXQICAVKAPGFGDNRIEILQD 191
            S+VP LEL N+Q+ PL+IIAED+++E              Q+CAVKAPGFGDNR E L D
Sbjct: 256  SIVPALELANAQRKPLVIIAEDLEAEALSTLVVNRLKVGLQVCAVKAPGFGDNRKENLMD 315

Query: 192  IATSTGAFLFGSEEETIQMEDMVLEHLGRAKEICVSRDDTLIVGGNGTLEKIQRRIEMLE 371
            +A +TG  +FG E   +++ED+ +   GR  E+ VS+DDT+++ G G   ++++R+E L 
Sbjct: 316  MAVATGGIVFGDEANMVRLEDIKMSDFGRVGEVVVSKDDTMLLKGKGQKAEVEKRVEGLR 375

Query: 372  DQLQIVTSNYERERVKERLSKLSDGVAVIKVGGSSEVEVNERTDRYXXXXXXXXXXXXEG 551
            + ++  TS+YE+E+++ERL++LS GVA+++VGGSS+VEV+E+ DR             EG
Sbjct: 376  EAIKESTSSYEKEKMQERLARLSSGVALLRVGGSSDVEVSEKKDRVIDALNATRAAVEEG 435

Query: 552  IVVGGGLALLRCIPVL-DVLNVSGDEQIGLEVMKTALQSPCYTIATNAGINGDIVVDKLL 728
            IV GGG ALLRCI  L D+   + D+ +G+E+++ AL+ PC TIA NAG++G +VV K+ 
Sbjct: 436  IVPGGGTALLRCIQKLNDLKGANEDQNMGIEIIRRALRMPCLTIAKNAGVDGAMVVAKVE 495

Query: 729  KLDGNIGYDAFNDEYVDMFESGIIDPVKVVRTALTDAARAASLLITS 869
             LDG+ GYDA   EY +M E GIIDP KVVRTA++DAA  ASLL T+
Sbjct: 496  ILDGDYGYDALKGEYGNMIERGIIDPTKVVRTAISDAAGVASLLTTA 542

>sp|Q5NVM5|CH60_PONPY 60 kDa heat shock protein, mitochondrial precursor (Hsp60) (60 kDa
            chaperonin) (CPN60) (Heat shock protein 60) (HSP-60)
          Length = 573

 Score =  272 bits (695), Expect = 1e-72
 Identities = 140/290 (48%), Positives = 196/290 (67%), Gaps = 1/290 (0%)
 Frame = +3

Query: 3    NVLSLVPVLELINSQQLPLLIIAEDVDSEXXXXXXXXXXXXXXQICAVKAPGFGDNRIEI 182
            +V S+VP LE+ N+ + PL+IIAEDVD E              Q+ AVKAPGFGDNR   
Sbjct: 253  SVQSIVPALEIANAHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAVKAPGFGDNRKNQ 312

Query: 183  LQDIATSTGAFLFGSEEETIQMEDMVLEHLGRAKEICVSRDDTLIVGGNGTLEKIQRRIE 362
            L+D+A +TG  +FG E  T+ +ED+    LG+  E+ V++DD +++ G G   +I++RI+
Sbjct: 313  LKDMAIATGGAVFGEEGLTLNLEDVQPHDLGKVGEVIVTKDDAMLLEGKGDKAQIEKRIQ 372

Query: 363  MLEDQLQIVTSNYERERVKERLSKLSDGVAVIKVGGSSEVEVNERTDRYXXXXXXXXXXX 542
             + +QL + TS YE+E++ ERL+KLSDGVAV+KVGG+S+VEVNE+ DR            
Sbjct: 373  EIIEQLDVTTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDRVTDALNATRAAA 432

Query: 543  XEGIVVGGGLALLRCIPVLDVLN-VSGDEQIGLEVMKTALQSPCYTIATNAGINGDIVVD 719
             EGIV+GGG ALLRCIP LD L   + D++IG+E++K  L+ P  TIA NAG+ G ++V+
Sbjct: 433  EEGIVLGGGCALLRCIPALDSLTPANEDQKIGIEIIKRTLKIPAMTIAKNAGVEGSLIVE 492

Query: 720  KLLKLDGNIGYDAFNDEYVDMFESGIIDPVKVVRTALTDAARAASLLITS 869
            K+++    +GYDA   ++V+M   GIIDP KVVRTAL DAA  ASLL T+
Sbjct: 493  KIMQSSSEVGYDAMVGDFVNMVGKGIIDPTKVVRTALLDAAGVASLLTTA 542

>sp|O02649|CH60_DROME 60 kDa heat shock protein, mitochondrial precursor (Hsp60) (60 kDa
            chaperonin) (CPN60) (Heat shock protein 60) (HSP-60)
            (Mitochondrial matrix protein P1)
          Length = 573

 Score =  266 bits (680), Expect = 6e-71
 Identities = 134/290 (46%), Positives = 197/290 (67%), Gaps = 1/290 (0%)
 Frame = +3

Query: 3    NVLSLVPVLELINSQQLPLLIIAEDVDSEXXXXXXXXXXXXXXQICAVKAPGFGDNRIEI 182
            +V S++P LEL N+Q+ PL+IIAED+D E              Q+ AVKAPGFGDNR   
Sbjct: 249  SVQSIIPALELANAQRKPLVIIAEDIDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKST 308

Query: 183  LQDIATSTGAFLFGSEEETIQMEDMVLEHLGRAKEICVSRDDTLIVGGNGTLEKIQRRIE 362
            L D+A ++G  +FG + + +++ED+ +  LG+  E+ +++DDTL++ G G  + + RR  
Sbjct: 309  LTDMAIASGGIVFGDDADLVKLEDVKVSDLGQVGEVVITKDDTLLLKGKGKKDDVLRRAN 368

Query: 363  MLEDQLQIVTSNYERERVKERLSKLSDGVAVIKVGGSSEVEVNERTDRYXXXXXXXXXXX 542
             ++DQ++  TS YE+E+++ERL++L+ GVA+++VGGSSEVEVNE+ DR            
Sbjct: 369  QIKDQIEDTTSEYEKEKLQERLARLASGVALLRVGGSSEVEVNEKKDRVHDALNATRAAV 428

Query: 543  XEGIVVGGGLALLRCIPVLD-VLNVSGDEQIGLEVMKTALQSPCYTIATNAGINGDIVVD 719
             EGIV GGG ALLRCI  L+ V   + D+++G+E+++ AL+ PC TIA NAG++G +VV 
Sbjct: 429  EEGIVPGGGTALLRCIEKLEGVETTNEDQKLGVEIVRRALRMPCMTIAKNAGVDGAMVVA 488

Query: 720  KLLKLDGNIGYDAFNDEYVDMFESGIIDPVKVVRTALTDAARAASLLITS 869
            K+    G+ GYDA   EY ++ E GIIDP KVVRTA+TDA+  ASLL T+
Sbjct: 489  KVENQAGDYGYDALKGEYGNLIEKGIIDPTKVVRTAITDASGVASLLTTA 538

>sp|P25420|CH63_HELVI 63 kDa chaperonin, mitochondrial precursor (p63)
          Length = 569

 Score =  257 bits (657), Expect = 3e-68
 Identities = 135/286 (47%), Positives = 188/286 (65%), Gaps = 1/286 (0%)
 Frame = +3

Query: 15   LVPVLELINSQQLPLLIIAEDVDSEXXXXXXXXXXXXXXQICAVKAPGFGDNRIEILQDI 194
            +VP LEL NSQ+ PL+IIAED D E               + AVKAPGFG+ R   L D+
Sbjct: 260  VVPALELANSQKKPLVIIAEDYDGEPLSVLVVNKLKIGLPVVAVKAPGFGEYRTNALLDM 319

Query: 195  ATSTGAFLFGSEEETIQMEDMVLEHLGRAKEICVSRDDTLIVGGNGTLEKIQRRIEMLED 374
            A +TG  +F  +   +++ED   E  G+  E+ +++D TL++ G G   +I++RI+ +++
Sbjct: 320  AAATGG-VFEDDTNLVRLEDCQAESFGQVGEVIITKDSTLLLKGKGDPNEIKQRIDQIKE 378

Query: 375  QLQIVTSNYERERVKERLSKLSDGVAVIKVGGSSEVEVNERTDRYXXXXXXXXXXXXEGI 554
            +L+  TSNY+RER+ +RL +L  GVAV+ +GG SEVEVNE+ DR             EGI
Sbjct: 379  ELETATSNYDRERLIDRLGRLQSGVAVLLIGGCSEVEVNEKKDRVNDALNATRAAVEEGI 438

Query: 555  VVGGGLALLRCIPVLDVLN-VSGDEQIGLEVMKTALQSPCYTIATNAGINGDIVVDKLLK 731
            V GGG ALLRCIP LD+L   + D++IG+ ++K AL++PC TIA+NAG +G +VV K+  
Sbjct: 439  VPGGGAALLRCIPALDLLKPANKDQEIGVSIIKKALRTPCITIASNAGFDGAVVVSKVED 498

Query: 732  LDGNIGYDAFNDEYVDMFESGIIDPVKVVRTALTDAARAASLLITS 869
            +    GYDA N+EYV+M E GIIDP KVVR ALTDA+  ASLL T+
Sbjct: 499  MGPEYGYDALNNEYVNMIEKGIIDPTKVVRRALTDASGVASLLTTA 544

>sp|P50140|CH60_CAEEL Chaperonin homolog HSP60, mitochondrial precursor (Heat shock protein
            60) (HSP-60)
          Length = 568

 Score =  250 bits (639), Expect = 3e-66
 Identities = 133/290 (45%), Positives = 186/290 (64%), Gaps = 2/290 (0%)
 Frame = +3

Query: 6    VLSLVPVLELINSQQLPLLIIAEDVDSEXXXXXXXXXXXXXXQICAVKAPGFGDNRIEIL 185
            V  +VP LEL N  + PL+IIAEDVD E              Q+ A+KAPGFGDNR   L
Sbjct: 245  VQDIVPALELANKLRRPLVIIAEDVDGEALTTLVLNRLKVGLQVVAIKAPGFGDNRKNTL 304

Query: 186  QDIATSTGAFLFGSEEETIQMEDMVLEHLGRAKEICVSRDDTLIVGGNGTLEKIQRRIEM 365
            +D+  +TGA +FG +   I++ED+    LG   E+ +++DDTL++ G G   +I++RIE 
Sbjct: 305  KDMGIATGATIFGDDSNLIKIEDITANDLGEVDEVTITKDDTLLLRGRGDQTEIEKRIEH 364

Query: 366  LEDQLQIVTSNYERERVKERLSKLSDGVAVIKVGGSSEVEVNERTDRYXXXXXXXXXXXX 545
            + D+++  TS+YE+E++ ERL+KLS GVAV+K+GG SEVEV E+ DR             
Sbjct: 365  ITDEIEQSTSDYEKEKLNERLAKLSKGVAVLKIGGGSEVEVGEKKDRVTDALCATRAAVE 424

Query: 546  EGIVVGGGLALLRCIPVLDVLNVSG-DEQIGLEVMKTALQSPCYTIATNAGINGDIVVDK 722
            EGIV GGG+ALLR +  L     +  D+QIG+ ++K AL  P  TI  NAG+    ++D+
Sbjct: 425  EGIVPGGGVALLRSLTALKNYKAANEDQQIGVNIVKKALTQPIATIVKNAGLEPSSIIDE 484

Query: 723  LL-KLDGNIGYDAFNDEYVDMFESGIIDPVKVVRTALTDAARAASLLITS 869
            +    + + GYDA N ++VDMFE+GIIDP KVVRTAL DA+  ASLL T+
Sbjct: 485  VTGNSNTSYGYDALNGKFVDMFEAGIIDPTKVVRTALQDASGVASLLATT 534

>sp|Q05046|CH62_CUCMA Chaperonin CPN60-2, mitochondrial precursor (HSP60-2)
          Length = 575

 Score =  244 bits (623), Expect = 2e-64
 Identities = 131/291 (45%), Positives = 197/291 (67%), Gaps = 2/291 (0%)
 Frame = +3

Query: 3    NVLSLVPVLELINSQQLPLLIIAEDVDSEXXXXXXXXXXXXXXQICAVKAPGFGDNRIEI 182
            ++ S+V VLEL   +Q PLLI++EDV+S+              ++CA+KAPGFG+NR   
Sbjct: 260  SINSVVKVLELALKRQRPLLIVSEDVESDALATLILNKLRAGIKVCAIKAPGFGENRKAG 319

Query: 183  LQDIATSTGAFLFGSEEETIQMEDMVLEHLGRAKEICVSRDDTLIVGGNGTLEKIQRRIE 362
            L D+A  TG  L  +EE  + +E + L+ LG  K+I +S+DDT+I+ G G  + I+ R E
Sbjct: 320  LHDLAVLTGGQLI-TEELGMNLEKVDLDMLGSCKKITISKDDTVILDGAGDKKSIEERCE 378

Query: 363  MLEDQLQIVTSNYERERVKERLSKLSDGVAVIKVGGSSEVEVNERTDRYXXXXXXXXXXX 542
             +   +++ TS+Y++E+++ERL+KLS GVAV+K+GG+SE EV E+ DR            
Sbjct: 379  QIRSAIELSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAV 438

Query: 543  XEGIVVGGGLALLRCIPVLDVLNVSG-DEQIGLEVMKTALQSPCYTIATNAGINGDIVVD 719
             EGIV GGG+ALL     LD L+ +  D++IG+++++ AL++P +TIA+NAG+ G +VV 
Sbjct: 439  EEGIVPGGGVALLYASKELDKLSTANFDQKIGVQIIQNALKTPVHTIASNAGVEGAVVVG 498

Query: 720  KLLKLDG-NIGYDAFNDEYVDMFESGIIDPVKVVRTALTDAARAASLLITS 869
            KLL+ D  ++GYDA   EYVDM ++GIIDP+KV+RTAL DAA  +SL+ T+
Sbjct: 499  KLLEQDNPDLGYDAAKGEYVDMIKAGIIDPLKVIRTALVDAASVSSLMTTT 549

>sp|P29197|CH60_ARATH Chaperonin CPN60, mitochondrial precursor (HSP60)
          Length = 577

 Score =  241 bits (615), Expect = 2e-63
 Identities = 129/291 (44%), Positives = 196/291 (67%), Gaps = 2/291 (0%)
 Frame = +3

Query: 3    NVLSLVPVLELINSQQLPLLIIAEDVDSEXXXXXXXXXXXXXXQICAVKAPGFGDNRIEI 182
            ++ S+V VLEL   +Q PLLI++EDV+S+              ++CA+KAPGFG+NR   
Sbjct: 259  SINSIVKVLELALKRQRPLLIVSEDVESDALATLILNKLRAGIKVCAIKAPGFGENRKAN 318

Query: 183  LQDIATSTGAFLFGSEEETIQMEDMVLEHLGRAKEICVSRDDTLIVGGNGTLEKIQRRIE 362
            LQD+A  TG  +  ++E  + +E + L  LG  K++ VS+DDT+I+ G G  + I+ R E
Sbjct: 319  LQDLAALTGGEVI-TDELGMNLEKVDLSMLGTCKKVTVSKDDTVILDGAGDKKGIEERCE 377

Query: 363  MLEDQLQIVTSNYERERVKERLSKLSDGVAVIKVGGSSEVEVNERTDRYXXXXXXXXXXX 542
             +   +++ TS+Y++E+++ERL+KLS GVAV+K+GG+SE EV E+ DR            
Sbjct: 378  QIRSAIELSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEVGEKKDRVTDALNATKAAV 437

Query: 543  XEGIVVGGGLALLRCIPVLDVLNVSG-DEQIGLEVMKTALQSPCYTIATNAGINGDIVVD 719
             EGI+ GGG+ALL     L+ L  +  D++IG+++++ AL++P YTIA+NAG+ G ++V 
Sbjct: 438  EEGILPGGGVALLYAARELEKLPTANFDQKIGVQIIQNALKTPVYTIASNAGVEGAVIVG 497

Query: 720  KLLKLDG-NIGYDAFNDEYVDMFESGIIDPVKVVRTALTDAARAASLLITS 869
            KLL+ D  ++GYDA   EYVDM ++GIIDP+KV+RTAL DAA  +SLL T+
Sbjct: 498  KLLEQDNPDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAASVSSLLTTT 548

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,122,091
Number of Sequences: 369166
Number of extensions: 1946648
Number of successful extensions: 6963
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6141
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8598109270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00037

  1. Dr_sW_001_O18
  2. Dr_sW_025_K05