Planarian EST Database

DrC_00021

Cluster detail
GO Category :
Consensus Sequence :
>DrC_00021 AAATATGAAAAGATTAGTGAAAAGAAAATATCTACATCAATTGAGATGTTATGCCAACGA TTCCCAGCTGAGTTTACTATGTATTTGAACTATTGCAGAGGTCTACGTTTCGAAGAAACT CCAGACTACATGTATTTGAGACAACTTTTTAGAATTCTCTTTCGCACTCTTAATCATCAG TTTGATTATACTTTCGATTGGACGATGCTCAAACAAAGAGCAGTAATGCCAAGTTCGAAC TCGAATTTTGCCAATGGAGCGACTGTTGCAGCTAATCAAACCACAGCAGCTATGGTCTGC ACAAATCCAGGCCCATCAGCAGTTAATATGACTTTGTCATCACAAACTGCTCTTAAACCG GGTGTACCTATCAATAATAATCCCGGTGGTGGTCTTTACTCAAGTGCGGATCCAAGCTCT TCTCAATTCAATCTGACACATACTGGCGCTGTTCCATTGTCTGCCAAGAAAGCTGGCGGT GGTTACTAGAGCGATTTAATATATGTATAAATATAGTGTGTGATTATTTCATATTGGTAA AATTGATGATGAAACTAATGCAAAAAACTGTATATTATTATAATTTAAATTTATTTCGTT TGTAAAGATATTTCAATCAGACCCATCGTATTATTAAATCGAGCAAAAGTTTATTGTAAA AATATCAAAGTAGTTGTTTAATATCGTTCATATCTTGTTTTTTATTGAAATCGTTAAACT TTAGAGAATAAAAGCGACGTTTA

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00021
         (743 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P67962|KC1A_CHICK  Casein kinase I, alpha isoform (CKI-al...   145   1e-34
sp|P48729|KC1A_HUMAN  Casein kinase I, alpha isoform (CKI-al...   145   1e-34
sp|P67829|KC1A_SHEEP  Casein kinase I, alpha isoform (CKI-al...   145   1e-34
sp|Q8N752|KC1AL_HUMAN  Casein kinase I, alpha-like isoform (...   145   1e-34
sp|P97633|KC1A_RAT  Casein kinase I, alpha isoform (CKI-alph...   145   1e-34
sp|P42168|YKL1_CAEEL  Putative casein kinase I C03C10.1 in c...   137   4e-32
sp|P54367|KC1A_DROME  Casein kinase I, alpha isoform (CKI-al...   132   7e-31
sp|P35507|KC1B_BOVIN  Casein kinase I, beta isoform (CKI-beta)    108   2e-23
sp|P42158|KC1D_ARATH  Casein kinase I, delta isoform-like (C...   104   3e-22
sp|P49674|KC1E_HUMAN  Casein kinase I, epsilon isoform (CKI-...   103   4e-22

>sp|P67962|KC1A_CHICK Casein kinase I, alpha isoform (CKI-alpha) (CK1)
 sp|P67963|KC1A_XENLA Casein kinase I, alpha isoform (CKI-alpha) (CK1)
          Length = 337

 Score =  145 bits (366), Expect = 1e-34
 Identities = 65/82 (79%), Positives = 75/82 (91%)
 Frame = +1

Query: 1   KYEKISEKKISTSIEMLCQRFPAEFTMYLNYCRGLRFEETPDYMYLRQLFRILFRTLNHQ 180
           KYEKISEKK+ST +E+LC+ FPAEF MYLNYCRGLRFEE PDYMYLRQLFRILFRTLNHQ
Sbjct: 232 KYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQ 291

Query: 181 FDYTFDWTMLKQRAVMPSSNSN 246
           +DYTFDWTMLKQ+A   +++S+
Sbjct: 292 YDYTFDWTMLKQKAAQQAASSS 313

>sp|P48729|KC1A_HUMAN Casein kinase I, alpha isoform (CKI-alpha) (CK1)
 sp|Q8BK63|KC1A_MOUSE Casein kinase I, alpha isoform (CKI-alpha) (CK1)
          Length = 337

 Score =  145 bits (366), Expect = 1e-34
 Identities = 65/82 (79%), Positives = 75/82 (91%)
 Frame = +1

Query: 1   KYEKISEKKISTSIEMLCQRFPAEFTMYLNYCRGLRFEETPDYMYLRQLFRILFRTLNHQ 180
           KYEKISEKK+ST +E+LC+ FPAEF MYLNYCRGLRFEE PDYMYLRQLFRILFRTLNHQ
Sbjct: 232 KYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQ 291

Query: 181 FDYTFDWTMLKQRAVMPSSNSN 246
           +DYTFDWTMLKQ+A   +++S+
Sbjct: 292 YDYTFDWTMLKQKAAQQAASSS 313

>sp|P67829|KC1A_SHEEP Casein kinase I, alpha isoform (CKI-alpha) (CK1)
 sp|P67828|KC1A_RABIT Casein kinase I, alpha isoform (CKI-alpha) (CK1)
 sp|P67827|KC1A_BOVIN Casein kinase I, alpha isoform (CKI-alpha) (CK1)
          Length = 325

 Score =  145 bits (366), Expect = 1e-34
 Identities = 65/82 (79%), Positives = 75/82 (91%)
 Frame = +1

Query: 1   KYEKISEKKISTSIEMLCQRFPAEFTMYLNYCRGLRFEETPDYMYLRQLFRILFRTLNHQ 180
           KYEKISEKK+ST +E+LC+ FPAEF MYLNYCRGLRFEE PDYMYLRQLFRILFRTLNHQ
Sbjct: 232 KYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQ 291

Query: 181 FDYTFDWTMLKQRAVMPSSNSN 246
           +DYTFDWTMLKQ+A   +++S+
Sbjct: 292 YDYTFDWTMLKQKAAQQAASSS 313

>sp|Q8N752|KC1AL_HUMAN Casein kinase I, alpha-like isoform (CKI-alpha-like) (CK1)
          Length = 337

 Score =  145 bits (366), Expect = 1e-34
 Identities = 65/82 (79%), Positives = 75/82 (91%)
 Frame = +1

Query: 1   KYEKISEKKISTSIEMLCQRFPAEFTMYLNYCRGLRFEETPDYMYLRQLFRILFRTLNHQ 180
           KYEKISEKK+ST +E+LC+ FPAEF MYLNYCRGLRFEE PDYMYLRQLFRILFRTLNHQ
Sbjct: 232 KYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEVPDYMYLRQLFRILFRTLNHQ 291

Query: 181 FDYTFDWTMLKQRAVMPSSNSN 246
           +DYTFDWTMLKQ+A   +++S+
Sbjct: 292 YDYTFDWTMLKQKAAQQAASSS 313

>sp|P97633|KC1A_RAT Casein kinase I, alpha isoform (CKI-alpha) (CK1)
          Length = 325

 Score =  145 bits (366), Expect = 1e-34
 Identities = 65/82 (79%), Positives = 75/82 (91%)
 Frame = +1

Query: 1   KYEKISEKKISTSIEMLCQRFPAEFTMYLNYCRGLRFEETPDYMYLRQLFRILFRTLNHQ 180
           KYEKISEKK+ST +E+LC+ FPAEF MYLNYCRGLRFEE PDYMYLRQLFRILFRTLNHQ
Sbjct: 232 KYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQ 291

Query: 181 FDYTFDWTMLKQRAVMPSSNSN 246
           +DYTFDWTMLKQ+A   +++S+
Sbjct: 292 YDYTFDWTMLKQKAAQQAASSS 313

>sp|P42168|YKL1_CAEEL Putative casein kinase I C03C10.1 in chromosome III
          Length = 341

 Score =  137 bits (344), Expect = 4e-32
 Identities = 66/94 (70%), Positives = 77/94 (81%), Gaps = 5/94 (5%)
 Frame = +1

Query: 1   KYEKISEKKISTSIEMLCQRFPAEFTMYLNYCRGLRFEETPDYMYLRQLFRILFRTLNHQ 180
           KYEKISEKK++TS+E LC+ FPAEF MYL+Y RGLRF+E+PDYMYLRQLFRILFRTLNHQ
Sbjct: 231 KYEKISEKKMTTSVEHLCKGFPAEFPMYLSYTRGLRFDESPDYMYLRQLFRILFRTLNHQ 290

Query: 181 FDYTFDWTMLKQRAVMPSSN-----SNFANGATV 267
           +DYTFDWTMLKQ+A    S+     +    GATV
Sbjct: 291 YDYTFDWTMLKQKAQQSQSSGVPGTNTTTQGATV 324

>sp|P54367|KC1A_DROME Casein kinase I, alpha isoform (CKI-alpha) (DmCK1)
          Length = 337

 Score =  132 bits (333), Expect = 7e-31
 Identities = 60/73 (82%), Positives = 67/73 (91%)
 Frame = +1

Query: 1   KYEKISEKKISTSIEMLCQRFPAEFTMYLNYCRGLRFEETPDYMYLRQLFRILFRTLNHQ 180
           KYEKISEKK+ST IE+LC+  PAEF+MYLNYCR LRFEE PDYMYLRQLFRILFRTLNHQ
Sbjct: 235 KYEKISEKKMSTPIEVLCKGSPAEFSMYLNYCRSLRFEEQPDYMYLRQLFRILFRTLNHQ 294

Query: 181 FDYTFDWTMLKQR 219
           +DY +DWTMLKQ+
Sbjct: 295 YDYIYDWTMLKQK 307

>sp|P35507|KC1B_BOVIN Casein kinase I, beta isoform (CKI-beta)
          Length = 336

 Score =  108 bits (270), Expect = 2e-23
 Identities = 49/82 (59%), Positives = 63/82 (76%)
 Frame = +1

Query: 1   KYEKISEKKISTSIEMLCQRFPAEFTMYLNYCRGLRFEETPDYMYLRQLFRILFRTLNHQ 180
           K EKISE K++T +++LC+ FP EF MYL YC  L FEE PDY YLRQLFR+LFR L++Q
Sbjct: 232 KCEKISEMKMTTPVDVLCKGFPIEFAMYLKYCLRLSFEEAPDYRYLRQLFRLLFRKLSYQ 291

Query: 181 FDYTFDWTMLKQRAVMPSSNSN 246
            DY FDW +LKQ+A   +S+S+
Sbjct: 292 HDYAFDWIVLKQKAEQQASSSS 313

>sp|P42158|KC1D_ARATH Casein kinase I, delta isoform-like (CKI-delta)
          Length = 450

 Score =  104 bits (259), Expect = 3e-22
 Identities = 51/94 (54%), Positives = 64/94 (68%), Gaps = 4/94 (4%)
 Frame = +1

Query: 1   KYEKISEKKISTSIEMLCQRFPAEFTMYLNYCRGLRFEETPDYMYLRQLFRILFRTLNHQ 180
           KYE+ISEKK+STSIE LC+ +P+EF  Y +YCR LRF++ PDY YL+++FR LF     Q
Sbjct: 224 KYERISEKKVSTSIEALCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQ 283

Query: 181 FDYTFDWTMLK----QRAVMPSSNSNFANGATVA 270
           FDY FDWT+LK    Q    PS   N A G + A
Sbjct: 284 FDYVFDWTILKYQQSQLTAPPSRALNPAVGTSAA 317

>sp|P49674|KC1E_HUMAN Casein kinase I, epsilon isoform (CKI-epsilon) (CKIe)
          Length = 416

 Score =  103 bits (258), Expect = 4e-22
 Identities = 45/71 (63%), Positives = 56/71 (78%)
 Frame = +1

Query: 1   KYEKISEKKISTSIEMLCQRFPAEFTMYLNYCRGLRFEETPDYMYLRQLFRILFRTLNHQ 180
           KYE+ISEKK+ST IE+LC+ +P+EF+ YLN+CR LRF++ PDY YLRQLFR LF      
Sbjct: 224 KYERISEKKMSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS 283

Query: 181 FDYTFDWTMLK 213
           +DY FDW MLK
Sbjct: 284 YDYVFDWNMLK 294

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,895,501
Number of Sequences: 369166
Number of extensions: 1428172
Number of successful extensions: 2902
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2899
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 6728100400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00021

Planaria EST Database

DrC_00021

BLASTX 2.2.13 [Nov-27-2005]

Cluster detail