Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_001_I10
(743 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P67962|KC1A_CHICK Casein kinase I, alpha isoform (CKI-al... 145 1e-34
sp|P48729|KC1A_HUMAN Casein kinase I, alpha isoform (CKI-al... 145 1e-34
sp|P67829|KC1A_SHEEP Casein kinase I, alpha isoform (CKI-al... 145 1e-34
sp|Q8N752|KC1AL_HUMAN Casein kinase I, alpha-like isoform (... 145 1e-34
sp|P97633|KC1A_RAT Casein kinase I, alpha isoform (CKI-alph... 145 1e-34
sp|P42168|YKL1_CAEEL Putative casein kinase I C03C10.1 in c... 137 4e-32
sp|P54367|KC1A_DROME Casein kinase I, alpha isoform (CKI-al... 132 7e-31
sp|P35507|KC1B_BOVIN Casein kinase I, beta isoform (CKI-beta) 108 2e-23
sp|P42158|KC1D_ARATH Casein kinase I, delta isoform-like (C... 104 3e-22
sp|P49674|KC1E_HUMAN Casein kinase I, epsilon isoform (CKI-... 103 4e-22
>sp|P67962|KC1A_CHICK Casein kinase I, alpha isoform (CKI-alpha) (CK1)
sp|P67963|KC1A_XENLA Casein kinase I, alpha isoform (CKI-alpha) (CK1)
Length = 337
Score = 145 bits (366), Expect = 1e-34
Identities = 65/82 (79%), Positives = 75/82 (91%)
Frame = +1
Query: 1 KYEKISEKKISTSIEMLCQRFPAEFTMYLNYCRGLRFEETPDYMYLRQLFRILFRTLNHQ 180
KYEKISEKK+ST +E+LC+ FPAEF MYLNYCRGLRFEE PDYMYLRQLFRILFRTLNHQ
Sbjct: 232 KYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQ 291
Query: 181 FDYTFDWTMLKQRAVMPSSNSN 246
+DYTFDWTMLKQ+A +++S+
Sbjct: 292 YDYTFDWTMLKQKAAQQAASSS 313
>sp|P48729|KC1A_HUMAN Casein kinase I, alpha isoform (CKI-alpha) (CK1)
sp|Q8BK63|KC1A_MOUSE Casein kinase I, alpha isoform (CKI-alpha) (CK1)
Length = 337
Score = 145 bits (366), Expect = 1e-34
Identities = 65/82 (79%), Positives = 75/82 (91%)
Frame = +1
Query: 1 KYEKISEKKISTSIEMLCQRFPAEFTMYLNYCRGLRFEETPDYMYLRQLFRILFRTLNHQ 180
KYEKISEKK+ST +E+LC+ FPAEF MYLNYCRGLRFEE PDYMYLRQLFRILFRTLNHQ
Sbjct: 232 KYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQ 291
Query: 181 FDYTFDWTMLKQRAVMPSSNSN 246
+DYTFDWTMLKQ+A +++S+
Sbjct: 292 YDYTFDWTMLKQKAAQQAASSS 313
>sp|P67829|KC1A_SHEEP Casein kinase I, alpha isoform (CKI-alpha) (CK1)
sp|P67828|KC1A_RABIT Casein kinase I, alpha isoform (CKI-alpha) (CK1)
sp|P67827|KC1A_BOVIN Casein kinase I, alpha isoform (CKI-alpha) (CK1)
Length = 325
Score = 145 bits (366), Expect = 1e-34
Identities = 65/82 (79%), Positives = 75/82 (91%)
Frame = +1
Query: 1 KYEKISEKKISTSIEMLCQRFPAEFTMYLNYCRGLRFEETPDYMYLRQLFRILFRTLNHQ 180
KYEKISEKK+ST +E+LC+ FPAEF MYLNYCRGLRFEE PDYMYLRQLFRILFRTLNHQ
Sbjct: 232 KYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQ 291
Query: 181 FDYTFDWTMLKQRAVMPSSNSN 246
+DYTFDWTMLKQ+A +++S+
Sbjct: 292 YDYTFDWTMLKQKAAQQAASSS 313
>sp|Q8N752|KC1AL_HUMAN Casein kinase I, alpha-like isoform (CKI-alpha-like) (CK1)
Length = 337
Score = 145 bits (366), Expect = 1e-34
Identities = 65/82 (79%), Positives = 75/82 (91%)
Frame = +1
Query: 1 KYEKISEKKISTSIEMLCQRFPAEFTMYLNYCRGLRFEETPDYMYLRQLFRILFRTLNHQ 180
KYEKISEKK+ST +E+LC+ FPAEF MYLNYCRGLRFEE PDYMYLRQLFRILFRTLNHQ
Sbjct: 232 KYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEVPDYMYLRQLFRILFRTLNHQ 291
Query: 181 FDYTFDWTMLKQRAVMPSSNSN 246
+DYTFDWTMLKQ+A +++S+
Sbjct: 292 YDYTFDWTMLKQKAAQQAASSS 313
>sp|P97633|KC1A_RAT Casein kinase I, alpha isoform (CKI-alpha) (CK1)
Length = 325
Score = 145 bits (366), Expect = 1e-34
Identities = 65/82 (79%), Positives = 75/82 (91%)
Frame = +1
Query: 1 KYEKISEKKISTSIEMLCQRFPAEFTMYLNYCRGLRFEETPDYMYLRQLFRILFRTLNHQ 180
KYEKISEKK+ST +E+LC+ FPAEF MYLNYCRGLRFEE PDYMYLRQLFRILFRTLNHQ
Sbjct: 232 KYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQ 291
Query: 181 FDYTFDWTMLKQRAVMPSSNSN 246
+DYTFDWTMLKQ+A +++S+
Sbjct: 292 YDYTFDWTMLKQKAAQQAASSS 313
>sp|P42168|YKL1_CAEEL Putative casein kinase I C03C10.1 in chromosome III
Length = 341
Score = 137 bits (344), Expect = 4e-32
Identities = 66/94 (70%), Positives = 77/94 (81%), Gaps = 5/94 (5%)
Frame = +1
Query: 1 KYEKISEKKISTSIEMLCQRFPAEFTMYLNYCRGLRFEETPDYMYLRQLFRILFRTLNHQ 180
KYEKISEKK++TS+E LC+ FPAEF MYL+Y RGLRF+E+PDYMYLRQLFRILFRTLNHQ
Sbjct: 231 KYEKISEKKMTTSVEHLCKGFPAEFPMYLSYTRGLRFDESPDYMYLRQLFRILFRTLNHQ 290
Query: 181 FDYTFDWTMLKQRAVMPSSN-----SNFANGATV 267
+DYTFDWTMLKQ+A S+ + GATV
Sbjct: 291 YDYTFDWTMLKQKAQQSQSSGVPGTNTTTQGATV 324
>sp|P54367|KC1A_DROME Casein kinase I, alpha isoform (CKI-alpha) (DmCK1)
Length = 337
Score = 132 bits (333), Expect = 7e-31
Identities = 60/73 (82%), Positives = 67/73 (91%)
Frame = +1
Query: 1 KYEKISEKKISTSIEMLCQRFPAEFTMYLNYCRGLRFEETPDYMYLRQLFRILFRTLNHQ 180
KYEKISEKK+ST IE+LC+ PAEF+MYLNYCR LRFEE PDYMYLRQLFRILFRTLNHQ
Sbjct: 235 KYEKISEKKMSTPIEVLCKGSPAEFSMYLNYCRSLRFEEQPDYMYLRQLFRILFRTLNHQ 294
Query: 181 FDYTFDWTMLKQR 219
+DY +DWTMLKQ+
Sbjct: 295 YDYIYDWTMLKQK 307
>sp|P35507|KC1B_BOVIN Casein kinase I, beta isoform (CKI-beta)
Length = 336
Score = 108 bits (270), Expect = 2e-23
Identities = 49/82 (59%), Positives = 63/82 (76%)
Frame = +1
Query: 1 KYEKISEKKISTSIEMLCQRFPAEFTMYLNYCRGLRFEETPDYMYLRQLFRILFRTLNHQ 180
K EKISE K++T +++LC+ FP EF MYL YC L FEE PDY YLRQLFR+LFR L++Q
Sbjct: 232 KCEKISEMKMTTPVDVLCKGFPIEFAMYLKYCLRLSFEEAPDYRYLRQLFRLLFRKLSYQ 291
Query: 181 FDYTFDWTMLKQRAVMPSSNSN 246
DY FDW +LKQ+A +S+S+
Sbjct: 292 HDYAFDWIVLKQKAEQQASSSS 313
>sp|P42158|KC1D_ARATH Casein kinase I, delta isoform-like (CKI-delta)
Length = 450
Score = 104 bits (259), Expect = 3e-22
Identities = 51/94 (54%), Positives = 64/94 (68%), Gaps = 4/94 (4%)
Frame = +1
Query: 1 KYEKISEKKISTSIEMLCQRFPAEFTMYLNYCRGLRFEETPDYMYLRQLFRILFRTLNHQ 180
KYE+ISEKK+STSIE LC+ +P+EF Y +YCR LRF++ PDY YL+++FR LF Q
Sbjct: 224 KYERISEKKVSTSIEALCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQ 283
Query: 181 FDYTFDWTMLK----QRAVMPSSNSNFANGATVA 270
FDY FDWT+LK Q PS N A G + A
Sbjct: 284 FDYVFDWTILKYQQSQLTAPPSRALNPAVGTSAA 317
>sp|P49674|KC1E_HUMAN Casein kinase I, epsilon isoform (CKI-epsilon) (CKIe)
Length = 416
Score = 103 bits (258), Expect = 4e-22
Identities = 45/71 (63%), Positives = 56/71 (78%)
Frame = +1
Query: 1 KYEKISEKKISTSIEMLCQRFPAEFTMYLNYCRGLRFEETPDYMYLRQLFRILFRTLNHQ 180
KYE+ISEKK+ST IE+LC+ +P+EF+ YLN+CR LRF++ PDY YLRQLFR LF
Sbjct: 224 KYERISEKKMSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS 283
Query: 181 FDYTFDWTMLK 213
+DY FDW MLK
Sbjct: 284 YDYVFDWNMLK 294
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,895,501
Number of Sequences: 369166
Number of extensions: 1428172
Number of successful extensions: 2902
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2899
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 6728100400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)