Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_006_L21
(467 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P67962|KC1A_CHICK Casein kinase I, alpha isoform (CKI-al... 116 2e-26
sp|P48729|KC1A_HUMAN Casein kinase I, alpha isoform (CKI-al... 116 2e-26
sp|P67829|KC1A_SHEEP Casein kinase I, alpha isoform (CKI-al... 116 2e-26
sp|Q8N752|KC1AL_HUMAN Casein kinase I, alpha-like isoform (... 116 2e-26
sp|P97633|KC1A_RAT Casein kinase I, alpha isoform (CKI-alph... 116 2e-26
sp|P42168|YKL1_CAEEL Putative casein kinase I C03C10.1 in c... 108 6e-24
sp|P54367|KC1A_DROME Casein kinase I, alpha isoform (CKI-al... 104 1e-22
sp|P35507|KC1B_BOVIN Casein kinase I, beta isoform (CKI-beta) 88 1e-17
sp|P49674|KC1E_HUMAN Casein kinase I, epsilon isoform (CKI-... 76 4e-14
sp|Q9JMK2|KC1E_MOUSE Casein kinase I, epsilon isoform (CKI-... 76 4e-14
>sp|P67962|KC1A_CHICK Casein kinase I, alpha isoform (CKI-alpha) (CK1)
sp|P67963|KC1A_XENLA Casein kinase I, alpha isoform (CKI-alpha) (CK1)
Length = 337
Score = 116 bits (291), Expect = 2e-26
Identities = 51/62 (82%), Positives = 57/62 (91%)
Frame = +3
Query: 12 FPAEFTMYLNYCRGLRFEETPDYMYLRQLFRILFRTLNHQFDYTFDWTMLKQRAVMPSSN 191
FPAEF MYLNYCRGLRFEE PDYMYLRQLFRILFRTLNHQ+DYTFDWTMLKQ+A +++
Sbjct: 252 FPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQQAAS 311
Query: 192 SN 197
S+
Sbjct: 312 SS 313
>sp|P48729|KC1A_HUMAN Casein kinase I, alpha isoform (CKI-alpha) (CK1)
sp|Q8BK63|KC1A_MOUSE Casein kinase I, alpha isoform (CKI-alpha) (CK1)
Length = 337
Score = 116 bits (291), Expect = 2e-26
Identities = 51/62 (82%), Positives = 57/62 (91%)
Frame = +3
Query: 12 FPAEFTMYLNYCRGLRFEETPDYMYLRQLFRILFRTLNHQFDYTFDWTMLKQRAVMPSSN 191
FPAEF MYLNYCRGLRFEE PDYMYLRQLFRILFRTLNHQ+DYTFDWTMLKQ+A +++
Sbjct: 252 FPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQQAAS 311
Query: 192 SN 197
S+
Sbjct: 312 SS 313
>sp|P67829|KC1A_SHEEP Casein kinase I, alpha isoform (CKI-alpha) (CK1)
sp|P67828|KC1A_RABIT Casein kinase I, alpha isoform (CKI-alpha) (CK1)
sp|P67827|KC1A_BOVIN Casein kinase I, alpha isoform (CKI-alpha) (CK1)
Length = 325
Score = 116 bits (291), Expect = 2e-26
Identities = 51/62 (82%), Positives = 57/62 (91%)
Frame = +3
Query: 12 FPAEFTMYLNYCRGLRFEETPDYMYLRQLFRILFRTLNHQFDYTFDWTMLKQRAVMPSSN 191
FPAEF MYLNYCRGLRFEE PDYMYLRQLFRILFRTLNHQ+DYTFDWTMLKQ+A +++
Sbjct: 252 FPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQQAAS 311
Query: 192 SN 197
S+
Sbjct: 312 SS 313
>sp|Q8N752|KC1AL_HUMAN Casein kinase I, alpha-like isoform (CKI-alpha-like) (CK1)
Length = 337
Score = 116 bits (291), Expect = 2e-26
Identities = 51/62 (82%), Positives = 57/62 (91%)
Frame = +3
Query: 12 FPAEFTMYLNYCRGLRFEETPDYMYLRQLFRILFRTLNHQFDYTFDWTMLKQRAVMPSSN 191
FPAEF MYLNYCRGLRFEE PDYMYLRQLFRILFRTLNHQ+DYTFDWTMLKQ+A +++
Sbjct: 252 FPAEFAMYLNYCRGLRFEEVPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQQAAS 311
Query: 192 SN 197
S+
Sbjct: 312 SS 313
>sp|P97633|KC1A_RAT Casein kinase I, alpha isoform (CKI-alpha) (CK1)
Length = 325
Score = 116 bits (291), Expect = 2e-26
Identities = 51/62 (82%), Positives = 57/62 (91%)
Frame = +3
Query: 12 FPAEFTMYLNYCRGLRFEETPDYMYLRQLFRILFRTLNHQFDYTFDWTMLKQRAVMPSSN 191
FPAEF MYLNYCRGLRFEE PDYMYLRQLFRILFRTLNHQ+DYTFDWTMLKQ+A +++
Sbjct: 252 FPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQQAAS 311
Query: 192 SN 197
S+
Sbjct: 312 SS 313
>sp|P42168|YKL1_CAEEL Putative casein kinase I C03C10.1 in chromosome III
Length = 341
Score = 108 bits (270), Expect = 6e-24
Identities = 52/74 (70%), Positives = 59/74 (79%), Gaps = 5/74 (6%)
Frame = +3
Query: 12 FPAEFTMYLNYCRGLRFEETPDYMYLRQLFRILFRTLNHQFDYTFDWTMLKQRAVMPSSN 191
FPAEF MYL+Y RGLRF+E+PDYMYLRQLFRILFRTLNHQ+DYTFDWTMLKQ+A S+
Sbjct: 251 FPAEFPMYLSYTRGLRFDESPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAQQSQSS 310
Query: 192 -----SNFANGATV 218
+ GATV
Sbjct: 311 GVPGTNTTTQGATV 324
>sp|P54367|KC1A_DROME Casein kinase I, alpha isoform (CKI-alpha) (DmCK1)
Length = 337
Score = 104 bits (259), Expect = 1e-22
Identities = 45/52 (86%), Positives = 49/52 (94%)
Frame = +3
Query: 15 PAEFTMYLNYCRGLRFEETPDYMYLRQLFRILFRTLNHQFDYTFDWTMLKQR 170
PAEF+MYLNYCR LRFEE PDYMYLRQLFRILFRTLNHQ+DY +DWTMLKQ+
Sbjct: 256 PAEFSMYLNYCRSLRFEEQPDYMYLRQLFRILFRTLNHQYDYIYDWTMLKQK 307
>sp|P35507|KC1B_BOVIN Casein kinase I, beta isoform (CKI-beta)
Length = 336
Score = 87.8 bits (216), Expect = 1e-17
Identities = 39/62 (62%), Positives = 47/62 (75%)
Frame = +3
Query: 12 FPAEFTMYLNYCRGLRFEETPDYMYLRQLFRILFRTLNHQFDYTFDWTMLKQRAVMPSSN 191
FP EF MYL YC L FEE PDY YLRQLFR+LFR L++Q DY FDW +LKQ+A +S+
Sbjct: 252 FPIEFAMYLKYCLRLSFEEAPDYRYLRQLFRLLFRKLSYQHDYAFDWIVLKQKAEQQASS 311
Query: 192 SN 197
S+
Sbjct: 312 SS 313
>sp|P49674|KC1E_HUMAN Casein kinase I, epsilon isoform (CKI-epsilon) (CKIe)
Length = 416
Score = 75.9 bits (185), Expect = 4e-14
Identities = 31/51 (60%), Positives = 38/51 (74%)
Frame = +3
Query: 12 FPAEFTMYLNYCRGLRFEETPDYMYLRQLFRILFRTLNHQFDYTFDWTMLK 164
+P+EF+ YLN+CR LRF++ PDY YLRQLFR LF +DY FDW MLK
Sbjct: 244 YPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK 294
>sp|Q9JMK2|KC1E_MOUSE Casein kinase I, epsilon isoform (CKI-epsilon) (CKIe)
Length = 416
Score = 75.9 bits (185), Expect = 4e-14
Identities = 31/51 (60%), Positives = 38/51 (74%)
Frame = +3
Query: 12 FPAEFTMYLNYCRGLRFEETPDYMYLRQLFRILFRTLNHQFDYTFDWTMLK 164
+P+EF+ YLN+CR LRF++ PDY YLRQLFR LF +DY FDW MLK
Sbjct: 244 YPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK 294
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,460,195
Number of Sequences: 369166
Number of extensions: 889965
Number of successful extensions: 1985
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1983
length of database: 68,354,980
effective HSP length: 101
effective length of database: 49,696,745
effective search space used: 2683624230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)