Planaria EST Database


DrC_03045

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_03045
         (629 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P36404|ARL2_HUMAN  ADP-ribosylation factor-like protein 2      315   5e-86
sp|Q9D0J4|ARL2_MOUSE  ADP-ribosylation factor-like protein 2      311   7e-85
sp|O08697|ARL2_RAT  ADP-ribosylation factor-like protein 2        311   7e-85
sp|Q06849|ARL2_DROME  GTP-binding ADP-ribosylation factor ho...   270   3e-72
sp|Q9ZPX1|ARF5_ARATH  Probable ADP-ribosylation factor At2g1...   259   5e-69
sp|Q19705|ARFM_CAEEL  GTP-binding ADP-ribosylation factor ho...   240   2e-63
sp|Q09767|ARL_SCHPO  ADP-ribosylation factor-like protein al...   197   2e-50
sp|P36405|ARL3_HUMAN  ADP-ribosylation factor-like protein 3      196   5e-50
sp|Q9WUL7|ARL3_MOUSE  ADP-ribosylation factor-like protein 3      195   9e-50
sp|P37996|ARL3_RAT  ADP-ribosylation factor-like protein 3 (...   194   1e-49
>sp|P36404|ARL2_HUMAN ADP-ribosylation factor-like protein 2
          Length = 184

 Score =  315 bits (808), Expect = 5e-86
 Identities = 150/183 (81%), Positives = 171/183 (93%)
 Frame = +1

Query: 1   GLLTILKKLKQKEKEVRILILGLDNAGKTTIVKKFNGEDISTISPTLGFSIKTLEHRKFK 180
           GLLTILKK+KQKE+E+R+L+LGLDNAGKTTI+KKFNGEDI TISPTLGF+IKTLEHR FK
Sbjct: 2   GLLTILKKMKQKERELRLLMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRGFK 61

Query: 181 LNIWDVGGQKSLRSYWRNYFEATDGLIWVVDSSDRHRMKDCVKELSNLLVEERLAGATLL 360
           LNIWDVGGQKSLRSYWRNYFE+TDGLIWVVDS+DR RM+DC +EL +LLVEERLAGATLL
Sbjct: 62  LNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLL 121

Query: 361 VFANKQDLPGALGIDEIRTALNLDTIRSHHWTIKGCSAVTGDNLLEGVDWLIDDIASRIF 540
           +FANKQDLPGAL  + IR AL LD+IRSHHW I+GCSAVTG+NLL G+DWL+DDI+SRIF
Sbjct: 122 IFANKQDLPGALSSNAIREALELDSIRSHHWCIQGCSAVTGENLLPGIDWLLDDISSRIF 181

Query: 541 SAD 549
           +AD
Sbjct: 182 TAD 184
>sp|Q9D0J4|ARL2_MOUSE ADP-ribosylation factor-like protein 2
          Length = 184

 Score =  311 bits (798), Expect = 7e-85
 Identities = 146/183 (79%), Positives = 171/183 (93%)
 Frame = +1

Query: 1   GLLTILKKLKQKEKEVRILILGLDNAGKTTIVKKFNGEDISTISPTLGFSIKTLEHRKFK 180
           GLLTILKK+KQKE+E+R+L+LGLDNAGKTTI+KKFNGED+ TISPTLGF+IKTLEHR FK
Sbjct: 2   GLLTILKKMKQKERELRLLMLGLDNAGKTTILKKFNGEDVDTISPTLGFNIKTLEHRGFK 61

Query: 181 LNIWDVGGQKSLRSYWRNYFEATDGLIWVVDSSDRHRMKDCVKELSNLLVEERLAGATLL 360
           LNIWDVGGQKSLRSYWRNYFE+TDGLIWVVDS+DR RM+DC +EL +LLVEERLAGATLL
Sbjct: 62  LNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLL 121

Query: 361 VFANKQDLPGALGIDEIRTALNLDTIRSHHWTIKGCSAVTGDNLLEGVDWLIDDIASRIF 540
           +FANKQDLPGAL  + I+ AL LD+IRSHHW I+GCSAVTG++LL G+DWL+DDI+SR+F
Sbjct: 122 IFANKQDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDISSRVF 181

Query: 541 SAD 549
           +AD
Sbjct: 182 TAD 184
>sp|O08697|ARL2_RAT ADP-ribosylation factor-like protein 2
          Length = 184

 Score =  311 bits (798), Expect = 7e-85
 Identities = 146/183 (79%), Positives = 171/183 (93%)
 Frame = +1

Query: 1   GLLTILKKLKQKEKEVRILILGLDNAGKTTIVKKFNGEDISTISPTLGFSIKTLEHRKFK 180
           GLLTILKK+KQKE++VR+L+LGLDNAGKTTI+KKFNGED+ TISPTLGF+IKTLEHR FK
Sbjct: 2   GLLTILKKMKQKERDVRLLMLGLDNAGKTTILKKFNGEDVDTISPTLGFNIKTLEHRGFK 61

Query: 181 LNIWDVGGQKSLRSYWRNYFEATDGLIWVVDSSDRHRMKDCVKELSNLLVEERLAGATLL 360
           LNIWDVGGQKSLRSYWRNYFE+TDGLIWVVDS+DR RM+DC +EL +LLVEERLAGATLL
Sbjct: 62  LNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLL 121

Query: 361 VFANKQDLPGALGIDEIRTALNLDTIRSHHWTIKGCSAVTGDNLLEGVDWLIDDIASRIF 540
           +FANKQDLPGAL  + I+ AL LD+IRSHHW I+GCSAVTG++LL G+DWL+DDI+SR+F
Sbjct: 122 IFANKQDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDISSRVF 181

Query: 541 SAD 549
           +AD
Sbjct: 182 TAD 184
>sp|Q06849|ARL2_DROME GTP-binding ADP-ribosylation factor homolog 2 protein
          Length = 184

 Score =  270 bits (689), Expect = 3e-72
 Identities = 128/183 (69%), Positives = 154/183 (84%)
 Frame = +1

Query: 1   GLLTILKKLKQKEKEVRILILGLDNAGKTTIVKKFNGEDISTISPTLGFSIKTLEHRKFK 180
           G LT+LKK++QKE+E+RIL+LGLDNAGKTTI+K+FNGE I TISPTLGF+IKTLEH  + 
Sbjct: 2   GFLTVLKKMRQKEREMRILLLGLDNAGKTTILKRFNGEPIDTISPTLGFNIKTLEHNGYT 61

Query: 181 LNIWDVGGQKSLRSYWRNYFEATDGLIWVVDSSDRHRMKDCVKELSNLLVEERLAGATLL 360
           LN+WDVGGQKSLRSYWRNYFE+TDGL+WVVDS+DR R++ C +EL  LL EERLAGATLL
Sbjct: 62  LNMWDVGGQKSLRSYWRNYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGATLL 121

Query: 361 VFANKQDLPGALGIDEIRTALNLDTIRSHHWTIKGCSAVTGDNLLEGVDWLIDDIASRIF 540
           V  NKQDLPGAL  +EI+  L+L+ I +HHW + G SAVTG+ LL  +DWLI DIA RIF
Sbjct: 122 VLCNKQDLPGALSSNEIKEILHLEDITTHHWLVAGVSAVTGEKLLSSMDWLIADIAKRIF 181

Query: 541 SAD 549
           + D
Sbjct: 182 TLD 184
>sp|Q9ZPX1|ARF5_ARATH Probable ADP-ribosylation factor At2g18390
          Length = 185

 Score =  259 bits (661), Expect = 5e-69
 Identities = 124/184 (67%), Positives = 153/184 (83%), Gaps = 1/184 (0%)
 Frame = +1

Query: 1   GLLTILKKLKQKEKEVRILILGLDNAGKTTIVKKFNGEDISTISPTLGFSIKTLEHRKFK 180
           GLL+I++K+K+KEKE+RIL++GLDN+GKTTIV K NGED S ISPTLGF+IKT+ ++K+ 
Sbjct: 2   GLLSIIRKIKKKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYQKYT 61

Query: 181 LNIWDVGGQKSLRSYWRNYFEATDGLIWVVDSSDRHRMKDCVKELSNLLVEERLAGATLL 360
           LNIWDVGGQK++RSYWRNYFE TDGL+WVVDSSD  R+ DC  EL NLL EERLAG++LL
Sbjct: 62  LNIWDVGGQKTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLAGSSLL 121

Query: 361 VFANKQDLPGALGIDEIRTALNLDTI-RSHHWTIKGCSAVTGDNLLEGVDWLIDDIASRI 537
           + ANKQD+ GAL  DEI   LNL+++ +S HW I GCSA TG+ LLEG DWL+ DIASRI
Sbjct: 122 ILANKQDIQGALTPDEIGKVLNLESMDKSRHWKIVGCSAYTGEGLLEGFDWLVQDIASRI 181

Query: 538 FSAD 549
           +  D
Sbjct: 182 YMLD 185
>sp|Q19705|ARFM_CAEEL GTP-binding ADP-ribosylation factor homolog protein evl-20
          Length = 184

 Score =  240 bits (613), Expect = 2e-63
 Identities = 113/183 (61%), Positives = 142/183 (77%)
 Frame = +1

Query: 1   GLLTILKKLKQKEKEVRILILGLDNAGKTTIVKKFNGEDISTISPTLGFSIKTLEHRKFK 180
           G L IL+K + +E+E+RILILGLDNAGKTT++KKF  E   TI PTLGF IKT+  + F+
Sbjct: 2   GFLKILRKQRAREREMRILILGLDNAGKTTLMKKFLDEPTDTIEPTLGFDIKTVHFKDFQ 61

Query: 181 LNIWDVGGQKSLRSYWRNYFEATDGLIWVVDSSDRHRMKDCVKELSNLLVEERLAGATLL 360
           LN+WDVGGQKSLRSYW+NYFE+TD LIWVVDSSDR R+  C +EL  LL EERLAGA+LL
Sbjct: 62  LNLWDVGGQKSLRSYWKNYFESTDALIWVVDSSDRERLLQCSEELKKLLGEERLAGASLL 121

Query: 361 VFANKQDLPGALGIDEIRTALNLDTIRSHHWTIKGCSAVTGDNLLEGVDWLIDDIASRIF 540
           V ANK DLPGA+ ++ I   L+L +I+SHHW I  C A++GD L++ + WL DD+ SR+F
Sbjct: 122 VLANKSDLPGAIDVNSIAQVLDLHSIKSHHWKIFSCCALSGDRLVQAMTWLCDDVGSRLF 181

Query: 541 SAD 549
             D
Sbjct: 182 ILD 184
>sp|Q09767|ARL_SCHPO ADP-ribosylation factor-like protein alp41 (Altered polarity
           protein 41)
          Length = 186

 Score =  197 bits (500), Expect = 2e-50
 Identities = 92/175 (52%), Positives = 127/175 (72%)
 Frame = +1

Query: 1   GLLTILKKLKQKEKEVRILILGLDNAGKTTIVKKFNGEDISTISPTLGFSIKTLEHRKFK 180
           GLLTIL++ K KE+EVR+L+LGLDNAGKTTI+K    ED++ +SPT GF I+TLE    +
Sbjct: 2   GLLTILRQQKLKEREVRVLLLGLDNAGKTTILKCLLNEDVNEVSPTFGFQIRTLEVEGLR 61

Query: 181 LNIWDVGGQKSLRSYWRNYFEATDGLIWVVDSSDRHRMKDCVKELSNLLVEERLAGATLL 360
             IWD+GGQK+LR++W+NYFE+T+ +IWVVDS D  R+++C   L  LLVEE+L   ++L
Sbjct: 62  FTIWDIGGQKTLRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELLVEEKLLFTSIL 121

Query: 361 VFANKQDLPGALGIDEIRTALNLDTIRSHHWTIKGCSAVTGDNLLEGVDWLIDDI 525
           V ANK D+ GAL  +EI   LN+   +S HW I   SA+TG N+ + + WL +D+
Sbjct: 122 VLANKSDVSGALSSEEISKILNISKYKSSHWRIFSVSALTGLNIKDAISWLANDL 176
>sp|P36405|ARL3_HUMAN ADP-ribosylation factor-like protein 3
          Length = 182

 Score =  196 bits (497), Expect = 5e-50
 Identities = 94/179 (52%), Positives = 136/179 (75%), Gaps = 1/179 (0%)
 Frame = +1

Query: 1   GLLTILKKLKQK-EKEVRILILGLDNAGKTTIVKKFNGEDISTISPTLGFSIKTLEHRKF 177
           GLL+IL+KLK   ++EVRIL+LGLDNAGKTT++K+   EDIS I+PT GF+IK+++ + F
Sbjct: 2   GLLSILRKLKSAPDQEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGF 61

Query: 178 KLNIWDVGGQKSLRSYWRNYFEATDGLIWVVDSSDRHRMKDCVKELSNLLVEERLAGATL 357
           KLN+WD+GGQ+ +R YW+NYFE TD LI+V+DS+DR R ++  +EL+ LL EE+L+   +
Sbjct: 62  KLNVWDIGGQRKIRPYWKNYFENTDILIYVIDSADRKRFEETGQELAELLEEEKLSCVPV 121

Query: 358 LVFANKQDLPGALGIDEIRTALNLDTIRSHHWTIKGCSAVTGDNLLEGVDWLIDDIASR 534
           L+FANKQDL  A    EI   LNL TIR   W I+ CSA+TG+ + +G++W+  ++ ++
Sbjct: 122 LIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAK 180
>sp|Q9WUL7|ARL3_MOUSE ADP-ribosylation factor-like protein 3
          Length = 182

 Score =  195 bits (495), Expect = 9e-50
 Identities = 94/179 (52%), Positives = 136/179 (75%), Gaps = 1/179 (0%)
 Frame = +1

Query: 1   GLLTILKKLKQK-EKEVRILILGLDNAGKTTIVKKFNGEDISTISPTLGFSIKTLEHRKF 177
           GLL+IL+KLK   ++EVRIL+LGLDNAGKTT++K+   EDIS I+PT GF+IK+++ + F
Sbjct: 2   GLLSILRKLKSAPDQEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGF 61

Query: 178 KLNIWDVGGQKSLRSYWRNYFEATDGLIWVVDSSDRHRMKDCVKELSNLLVEERLAGATL 357
           KLN+WD+GGQ+ +R YWR+YFE TD LI+V+DS+DR R ++  +EL+ LL EE+L+   +
Sbjct: 62  KLNVWDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPV 121

Query: 358 LVFANKQDLPGALGIDEIRTALNLDTIRSHHWTIKGCSAVTGDNLLEGVDWLIDDIASR 534
           L+FANKQDL  A    EI   LNL TIR   W I+ CSA+TG+ + +G++W+  ++ ++
Sbjct: 122 LIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAK 180
>sp|P37996|ARL3_RAT ADP-ribosylation factor-like protein 3 (ARD3)
          Length = 182

 Score =  194 bits (494), Expect = 1e-49
 Identities = 95/179 (53%), Positives = 136/179 (75%), Gaps = 1/179 (0%)
 Frame = +1

Query: 1   GLLTILKKLKQK-EKEVRILILGLDNAGKTTIVKKFNGEDISTISPTLGFSIKTLEHRKF 177
           GLL+IL+KLK   ++EVRIL+LGLDNAGKTT++K+   EDIS I+PT GF+IK+++ + F
Sbjct: 2   GLLSILRKLKSAPDQEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGF 61

Query: 178 KLNIWDVGGQKSLRSYWRNYFEATDGLIWVVDSSDRHRMKDCVKELSNLLVEERLAGATL 357
           KLN+WD+GGQ+ +R YWR+YFE TD LI+V+DS+DR R ++  +EL+ LL EE+L+   +
Sbjct: 62  KLNVWDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPV 121

Query: 358 LVFANKQDLPGALGIDEIRTALNLDTIRSHHWTIKGCSAVTGDNLLEGVDWLIDDIASR 534
           LVFANKQDL  A    EI   LNL TIR   W I+ CSA+TG+ + +G++W+  ++ ++
Sbjct: 122 LVFANKQDLLTAAPAAEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAK 180
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,160,387
Number of Sequences: 369166
Number of extensions: 1158227
Number of successful extensions: 5015
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4921
length of database: 68,354,980
effective HSP length: 106
effective length of database: 48,773,070
effective search space used: 5023626210
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)