Planaria EST Database


DrC_03015

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_03015
         (847 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q569K4|ZN533_HUMAN  Zinc finger protein 533                     58   4e-08
sp|Q9R0B7|ZN346_MOUSE  Zinc finger protein 346 (Just another...    50   6e-06
sp|Q9UL40|ZN346_HUMAN  Zinc finger protein 346 (Just another...    48   4e-05
sp|Q15911|ATBF1_HUMAN  Alpha-fetoprotein enhancer binding pr...    47   9e-05
sp|Q61329|ATBF1_MOUSE  Alpha-fetoprotein enhancer binding pr...    47   9e-05
sp|Q6PBT9|ZN533_BRARE  Zinc finger protein 533                     47   9e-05
sp|Q969S3|ZN622_HUMAN  Zinc finger protein 622 (Zinc finger-...    46   1e-04
sp|Q8BXJ8|ZN533_MOUSE  Zinc finger protein 533                     45   2e-04
sp|Q6AXX3|ZN659_RAT  Zinc finger protein 659                       45   2e-04
sp|Q90Y35|ZN622_CHICK  Zinc finger protein 622 (Zn-finger pr...    45   2e-04
>sp|Q569K4|ZN533_HUMAN Zinc finger protein 533
          Length = 471

 Score = 57.8 bits (138), Expect = 4e-08
 Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 8/180 (4%)
 Frame = +1

Query: 181 QLSGTNKKGFLVKCDVCNVSCSSQTAYEFHMKGKKHTKSLNKIALSSEESKNTSGIISNE 360
           QLS   KK     C+VCN+  +S    + H  GK H K + +++         +   SN 
Sbjct: 23  QLSKEKKKILFSFCEVCNIQLNSAAQAQVHSNGKSHRKRVKQLSDGQPPPPAQASPSSNS 82

Query: 361 SKGKSFPVVTVPATIEQSQILYNPNLTCE---ACQVSCSKLDQLQKHLEGARHQKKMKFN 531
           S G +    T+PA +    ++  P+L  +   +  V  S    L  +       +K   N
Sbjct: 83  STGSTCHTTTLPALVRTPTLMMQPSLDIKPFMSFPVDSSSAVGLFPNFNTMDPVQKAVIN 142

Query: 532 KF--IELKNKKDPSVYCDICDLCMTEESM-KLHKTSGKH--KRKSTDKTTDEPAAKKTKN 696
               + +  KK   + C++C L    +S  + H    KH  K K+ D T ++P    +K+
Sbjct: 143 HTFGVSIPPKKKQVISCNVCQLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPKMVPSKD 202

 Score = 39.3 bits (90), Expect = 0.014
 Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
 Frame = +1

Query: 211 LVKCDVCNVSCSSQTAYEFHMKGKKHTKSLNKIALSSEESKNTSGIISNESKGKSFPVVT 390
           L+ C +C V+ +S +  E H  G KH   +        E++N +G I      KS+P   
Sbjct: 284 LLYCSLCKVAVNSLSQLEAHNTGSKHKTMV--------EARNGAGPI------KSYPRPG 329

Query: 391 VPATIEQSQI---LYNPNLTCEACQVSCSKLDQLQKHLEGARHQKKM 522
               ++       L N    CE C V  +   QL++H+   RH+ ++
Sbjct: 330 SRLKMQNGSKGSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRV 376

 Score = 37.4 bits (85), Expect = 0.053
 Identities = 41/175 (23%), Positives = 67/175 (38%), Gaps = 36/175 (20%)
 Frame = +1

Query: 406 EQSQILYNPNLTCEACQVSCSKLDQLQKHLEGARHQKKMKFNKFIELKN-------KKDP 564
           E+ +IL++    CE C +  +   Q Q H  G  H+K++K     +L +       +  P
Sbjct: 27  EKKKILFS---FCEVCNIQLNSAAQAQVHSNGKSHRKRVK-----QLSDGQPPPPAQASP 78

Query: 565 SVYCDICDLCMTEESMKLHKTSGKHKRKSTDK--------------------TTDEPAAK 684
           S        C T     L +T     + S D                      T +P  K
Sbjct: 79  SSNSSTGSTCHTTTLPALVRTPTLMMQPSLDIKPFMSFPVDSSSAVGLFPNFNTMDPVQK 138

Query: 685 KTKN----VEIPTT---VENCGYCRINFKNTAEAVAHYQTQKHT--LNMINRSKN 822
              N    V IP     V +C  C++ F + ++A AHY+  KH   +  ++ +KN
Sbjct: 139 AVINHTFGVSIPPKKKQVISCNVCQLRFNSDSQAEAHYKGSKHAKKVKALDATKN 193
>sp|Q9R0B7|ZN346_MOUSE Zinc finger protein 346 (Just another zinc finger protein)
          Length = 294

 Score = 50.4 bits (119), Expect = 6e-06
 Identities = 34/159 (21%), Positives = 67/159 (42%), Gaps = 3/159 (1%)
 Frame = +1

Query: 52  NYRCVACNVFFSNFDEQKQHYF-TYHSRSVD--QGTFTAPMYSQYRQLSGTNKKGFLVKC 222
           N+ C  CN+ FS+    + HY    H++S+   Q +       Q R++   +K      C
Sbjct: 133 NHCCPICNMTFSSPAVAQSHYLGKTHAKSLKLKQQSTKGAALQQNREMLDPDKF-----C 187

Query: 223 DVCNVSCSSQTAYEFHMKGKKHTKSLNKIALSSEESKNTSGIISNESKGKSFPVVTVPAT 402
            +C+ + +     + H  GK+H K   K+ L +   +     +S+   GK +P       
Sbjct: 188 SLCHSTFNDPAMAQQHYMGKRHRKQETKLKLMAHYGRLADPAVSDLPAGKGYP------- 240

Query: 403 IEQSQILYNPNLTCEACQVSCSKLDQLQKHLEGARHQKK 519
                        C+ C++  + ++Q Q H+ G +H+ +
Sbjct: 241 -------------CKTCKIVLNSIEQYQAHVSGFKHKNQ 266

 Score = 38.9 bits (89), Expect = 0.018
 Identities = 39/203 (19%), Positives = 67/203 (33%), Gaps = 11/203 (5%)
 Frame = +1

Query: 217 KCDVCNVSCSSQTAYEFHMKGKKHTKSLNKIALSSEESKNTSGIISNESKGKSFPVVTVP 396
           +C VC     S++    H + KKH   + +  L+    +   G +               
Sbjct: 74  QCKVCCAMLISESQKLAHYQSKKHANKVKRY-LAIHGMETIKGDVKRLDSD--------- 123

Query: 397 ATIEQSQILYNPNLTCEACQVSCSKLDQLQKHLEGARHQKKMKFNK-------FIELKNK 555
              ++S    + N  C  C ++ S     Q H  G  H K +K  +         + +  
Sbjct: 124 ---QKSSRSKDKNHCCPICNMTFSSPAVAQSHYLGKTHAKSLKLKQQSTKGAALQQNREM 180

Query: 556 KDPSVYCDICDLCMTEESMKLHKTSGKHKRKSTDKTTDEPAAKKTKNVEIPTTVENCGY- 732
            DP  +C +C     + +M      GK  RK   K        +  +  +       GY 
Sbjct: 181 LDPDKFCSLCHSTFNDPAMAQQHYMGKRHRKQETKLKLMAHYGRLADPAVSDLPAGKGYP 240

Query: 733 ---CRINFKNTAEAVAHYQTQKH 792
              C+I   +  +  AH    KH
Sbjct: 241 CKTCKIVLNSIEQYQAHVSGFKH 263
>sp|Q9UL40|ZN346_HUMAN Zinc finger protein 346 (Just another zinc finger protein)
          Length = 294

 Score = 47.8 bits (112), Expect = 4e-05
 Identities = 33/159 (20%), Positives = 66/159 (41%), Gaps = 3/159 (1%)
 Frame = +1

Query: 52  NYRCVACNVFFSNFDEQKQHYF-TYHSRSVD--QGTFTAPMYSQYRQLSGTNKKGFLVKC 222
           N  C  CN+ FS+    + HY    H++++   Q +       Q R++   +K      C
Sbjct: 133 NQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALHQNREMIDPDKF-----C 187

Query: 223 DVCNVSCSSQTAYEFHMKGKKHTKSLNKIALSSEESKNTSGIISNESKGKSFPVVTVPAT 402
            +C+ + +     + H  GKKH K   K+ L +   +     +++   GK +P       
Sbjct: 188 SLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADPAVTDFPAGKGYP------- 240

Query: 403 IEQSQILYNPNLTCEACQVSCSKLDQLQKHLEGARHQKK 519
                        C+ C++  + ++Q Q H+ G +H+ +
Sbjct: 241 -------------CKTCKIVLNSIEQYQAHVSGFKHKNQ 266

 Score = 40.8 bits (94), Expect = 0.005
 Identities = 48/220 (21%), Positives = 67/220 (30%), Gaps = 28/220 (12%)
 Frame = +1

Query: 217 KCDVCNVSCSSQTAYEFHMKGKKHTKSLNKI-------ALSSEESKNTSGIISNESKGKS 375
           +C VC     S++    H + KKH   + +         L  E  K  S   S+ SK K 
Sbjct: 74  QCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDK- 132

Query: 376 FPVVTVPATIEQSQILYNPNLTCEACQVSCSKLDQLQKHLEGARHQKKMKFNK------- 534
                              N  C  C ++ S     Q H  G  H K +K  +       
Sbjct: 133 -------------------NQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEA 173

Query: 535 FIELKNKKDPSVYCDICDLCMTEESMKLHKTSGKHKRKSTDK--------------TTDE 672
             + +   DP  +C +C     +  M      GK  RK   K               TD 
Sbjct: 174 LHQNREMIDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADPAVTDF 233

Query: 673 PAAKKTKNVEIPTTVENCGYCRINFKNTAEAVAHYQTQKH 792
           PA K             C  C+I   +  +  AH    KH
Sbjct: 234 PAGKGYP----------CKTCKIVLNSIEQYQAHVSGFKH 263

 Score = 30.0 bits (66), Expect = 8.4
 Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 3/90 (3%)
 Frame = +1

Query: 61  CVACNVFFSNFDEQKQHYFTYHSRSVDQGTFTAPMYSQYRQLSGTN---KKGFLVKCDVC 231
           C  C+  F++    +QHY     R  +        Y +    + T+    KG+   C  C
Sbjct: 187 CSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADPAVTDFPAGKGY--PCKTC 244

Query: 232 NVSCSSQTAYEFHMKGKKHTKSLNKIALSS 321
            +  +S   Y+ H+ G KH     K   SS
Sbjct: 245 KIVLNSIEQYQAHVSGFKHKNQSPKTVASS 274
>sp|Q15911|ATBF1_HUMAN Alpha-fetoprotein enhancer binding protein (AT motif-binding factor)
            (AT-binding transcription factor 1)
          Length = 3703

 Score = 46.6 bits (109), Expect = 9e-05
 Identities = 49/207 (23%), Positives = 77/207 (37%), Gaps = 7/207 (3%)
 Frame = +1

Query: 55   YRCVACNVFFS-NFDEQKQHYFTYHSRSVDQGTFTAPMYSQYRQLSGTNKKGFLVKCDVC 231
            ++C  CN F + N D    H     S S D+  + A M   Y+             C +C
Sbjct: 945  FQCAVCNKFTTDNLDMLGLHMNVERSLSEDE--WKAVMGDSYQ-------------CKLC 989

Query: 232  NVSCSSQTAYEFHMKGKKHTKSLNKIALSSEESKNTSGIISNESKGKSFPVVTVPATIEQ 411
              +   +  ++ H K  KH +    +A   E  K      +NE + K   +         
Sbjct: 990  RYNTQLKANFQLHCKTDKHVQKYQLVAHIKEGGK------ANEWRLKCVAIG-------- 1035

Query: 412  SQILYNP-NLTCEACQVSCSKLDQLQKHLEGARHQKKMKFNKFIELKNKKDPSVYCDI-C 585
                 NP +L C AC    + L++L+ H   +RH+  +K  K ++          C   C
Sbjct: 1036 -----NPVHLKCNACDYYTNSLEKLRLHTVNSRHEASLKLYKHLQQHESGVEGESCYYHC 1090

Query: 586  DLCMTEESMKL----HKTSGKHKRKST 654
             LC      KL    H  S KH+R  +
Sbjct: 1091 VLCNYSTKAKLNLIQHVRSMKHQRSES 1117

 Score = 37.0 bits (84), Expect = 0.069
 Identities = 29/110 (26%), Positives = 44/110 (40%), Gaps = 1/110 (0%)
 Frame = +1

Query: 55   YRCVACNVFFSNFDEQKQHYFTYHSRSVDQGTFTAPMYSQYRQLSGTNKKGFLVKCDVCN 234
            Y+C  C   F+  +    HY +       +         Q    S  + K F  KC+ CN
Sbjct: 1545 YKCTVCKESFTQKNILLVHYNSVSHLHKLKRALQESATGQPEPTSSPDNKPF--KCNTCN 1602

Query: 235  VSCSSQTAYEFHMKGKKH-TKSLNKIALSSEESKNTSGIISNESKGKSFP 381
            V+ S  +  E HM+   H TK+      ++  S N +G  S+ S   S P
Sbjct: 1603 VAYSQSSTLEIHMRSVLHQTKARAAKLEAASGSSNGTGNSSSISLSSSTP 1652

 Score = 36.2 bits (82), Expect = 0.12
 Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 12/114 (10%)
 Frame = +1

Query: 217  KCDVCNVSCSSQTAYEFHMKGKKHTKSLNKI------------ALSSEESKNTSGIISNE 360
            +C+VCN S +++     HM+  KH  ++  +            A ++  +   +   +N 
Sbjct: 727  RCEVCNYSTTTKGNLSIHMQSDKHLNNMQNLQNGGGEQVFIHTAGAAAAAAAAAAAAANI 786

Query: 361  SKGKSFPVVTVPATIEQSQILYNPNLTCEACQVSCSKLDQLQKHLEGARHQKKM 522
            S     P  T P T         P   CE C    +    L+ H+   +H   M
Sbjct: 787  SSSCGAPSPTKPKT--------KPTWRCEVCDYETNVARNLRIHMTSEKHMHNM 832
>sp|Q61329|ATBF1_MOUSE Alpha-fetoprotein enhancer binding protein (AT motif-binding factor)
            (AT-binding transcription factor 1)
          Length = 3726

 Score = 46.6 bits (109), Expect = 9e-05
 Identities = 49/207 (23%), Positives = 77/207 (37%), Gaps = 7/207 (3%)
 Frame = +1

Query: 55   YRCVACNVFFS-NFDEQKQHYFTYHSRSVDQGTFTAPMYSQYRQLSGTNKKGFLVKCDVC 231
            ++C  CN F + N D    H     S S D+  + A M   Y+             C +C
Sbjct: 946  FQCAVCNKFTTDNLDMLGLHMNVERSLSEDE--WKAVMGDSYQ-------------CKLC 990

Query: 232  NVSCSSQTAYEFHMKGKKHTKSLNKIALSSEESKNTSGIISNESKGKSFPVVTVPATIEQ 411
              +   +  ++ H K  KH +    +A   E  K      +NE + K   +         
Sbjct: 991  RYNTQLKANFQLHCKTDKHVQKYQLVAHIKEGGK------ANEWRLKCVAIG-------- 1036

Query: 412  SQILYNP-NLTCEACQVSCSKLDQLQKHLEGARHQKKMKFNKFIELKNKKDPSVYCDI-C 585
                 NP +L C AC    + L++L+ H   +RH+  +K  K ++          C   C
Sbjct: 1037 -----NPVHLKCNACDYYTNSLEKLRLHTVNSRHEASLKLYKHLQQHESGVEGESCYYHC 1091

Query: 586  DLCMTEESMKL----HKTSGKHKRKST 654
             LC      KL    H  S KH+R  +
Sbjct: 1092 VLCNYSTKAKLNLIQHVRSMKHQRSES 1118

 Score = 34.7 bits (78), Expect = 0.34
 Identities = 23/114 (20%), Positives = 41/114 (35%), Gaps = 12/114 (10%)
 Frame = +1

Query: 217  KCDVCNVSCSSQTAYEFHMKGKKHTKSLNKI------------ALSSEESKNTSGIISNE 360
            +C+VCN S +++     HM+  KH  ++  +            A ++  +   +   +N 
Sbjct: 728  RCEVCNYSTTTKGNLSIHMQSDKHLNNMQNLQNGGGEQVFSHSAGAAAAAAAAAAAAANI 787

Query: 361  SKGKSFPVVTVPATIEQSQILYNPNLTCEACQVSCSKLDQLQKHLEGARHQKKM 522
                  P  T P T         P   CE C    +    L+ H+   +H   M
Sbjct: 788  GSSWGAPSPTKPKT--------KPTWRCEVCDYETNVARNLRIHMTSEKHMHNM 833

 Score = 34.3 bits (77), Expect = 0.45
 Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 4/111 (3%)
 Frame = +1

Query: 55   YRCVACNVFFSNFDEQKQHYFTYHSRSVDQGTFTAPMYSQYRQLSGTNKKGFLVKCDVCN 234
            Y+C  C   F+  +    HY +       +         Q    S  + K F  KC+ CN
Sbjct: 1555 YKCTVCKESFTQKNILLVHYNSVSHLHKLKRALQESATGQPEPTSSPDNKPF--KCNTCN 1612

Query: 235  VSCSSQTAYEFHMKGKKH-TKS-LNKIALSSEESKNT--SGIISNESKGKS 375
            V+ S  +  E HM+   H TK+   K+  +S  S  T  SG +S  S   S
Sbjct: 1613 VAYSQSSTLEIHMRSVLHQTKARAAKLEAASGNSNGTGNSGGVSLSSSTPS 1663
>sp|Q6PBT9|ZN533_BRARE Zinc finger protein 533
          Length = 492

 Score = 46.6 bits (109), Expect = 9e-05
 Identities = 44/186 (23%), Positives = 71/186 (38%), Gaps = 13/186 (6%)
 Frame = +1

Query: 181 QLSGTNKKGFLVKCDVCNVSCSSQTAYEFHMKGKKHTKSLNKI-------ALSSEESKNT 339
           QL    KK     CDVCN+   S    + H  GK H K + ++       A +S    + 
Sbjct: 2   QLQQEKKKLLYSLCDVCNIQLHSAAQAQVHYNGKSHLKRVKQLNNGEVPKASASLAPTSL 61

Query: 340 SGIISNESKGKSFPVVTVPATIEQSQILYNPNLTCEACQV----SCSKLDQLQKHLEGAR 507
             + S+ S+G S    T+P  +    ++    L  +        S S +           
Sbjct: 62  QSLSSSSSQGSSCHSNTLPTLVRTPSLMMQSGLDMKPFMTFPVESSSPVGLFPNFNTMDP 121

Query: 508 HQKKMKFNKF-IELKNKKDPSVYCDICDLCMTEESM-KLHKTSGKHKRKSTDKTTDEPAA 681
            QK +  + F + +  KK   + C+IC L    +S  + H    KH +K   K  + P  
Sbjct: 122 VQKAVINHTFGVSIPPKKKQVISCNICQLRFNSDSQAEAHYKGSKHAKKL--KAQESPKN 179

Query: 682 KKTKNV 699
           K+   V
Sbjct: 180 KQKSAV 185

 Score = 43.5 bits (101), Expect = 7e-04
 Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 5/109 (4%)
 Frame = +1

Query: 211 LVKCDVCNVSCSSQTAYEFHMKGKKHTKSLNKIALSSEESKNTSGIISNESKGKSFPVVT 390
           L+ C +C V+ +S +  E H  G KH   L        E++N +G I      K++P   
Sbjct: 305 LLYCSLCKVAVNSLSQLEAHNTGSKHKTML--------EARNGAGPI------KAYPRPG 350

Query: 391 VPATIEQSQI-----LYNPNLTCEACQVSCSKLDQLQKHLEGARHQKKM 522
               ++ +Q+     L N    CE C V  +   QL++H+   RH+ ++
Sbjct: 351 SKLKVQATQLNKGSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRV 399
>sp|Q969S3|ZN622_HUMAN Zinc finger protein 622 (Zinc finger-like protein 9)
          Length = 477

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 10/105 (9%)
 Frame = +1

Query: 49  SNYRCVACNVFFSNFDEQKQHYFT----YHSRS--VDQGTFTAPMYSQ----YRQLSGTN 198
           + Y C+ C V F + D Q+ HY T    Y+ R         TA  + +     R ++   
Sbjct: 2   ATYTCITCRVAFRDADMQRAHYKTDWHRYNLRRKVASMAPVTAEGFQERVRAQRAVAEEE 61

Query: 199 KKGFLVKCDVCNVSCSSQTAYEFHMKGKKHTKSLNKIALSSEESK 333
            KG    C VC+   +S  AYE H+K ++H + L K A+ +   K
Sbjct: 62  SKGSATYCTVCSKKFASFNAYENHLKSRRHVE-LEKKAVQAVNRK 105
>sp|Q8BXJ8|ZN533_MOUSE Zinc finger protein 533
          Length = 482

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 42/193 (21%), Positives = 75/193 (38%), Gaps = 21/193 (10%)
 Frame = +1

Query: 181 QLSGTNKKGFLVKCDVCNVSCSSQTAYEFHMKGKKHTKSLNKIALSSEESKNTSGII--- 351
           Q S   KK     C+VCN+  +S    + H  GK H K + +++   +      G +   
Sbjct: 23  QFSKEKKKILFSFCEVCNIQLNSAAQAQVHYDGKSHRKRVKQLS-DGQPPPPVQGSVPLL 81

Query: 352 ----------SNESKGKSFPVVTVPATIEQSQILYNPNLTCE---ACQVSCSKLDQLQKH 492
                      N S G +    T+PA +    ++  P+L  +   +  V  S    L  +
Sbjct: 82  AGPCPCPGPGPNTSTGSACHTTTLPALVRTPTLMMQPSLDIKPFMSFPVDSSSAVGLFPN 141

Query: 493 LEGARHQKKMKFNKF--IELKNKKDPSVYCDICDLCMTEESM-KLHKTSGKH--KRKSTD 657
                  +K   N    + +  KK   + C++C L    +S  + H    KH  K K+ +
Sbjct: 142 FNTMDPVQKAVINHTFGVSIPPKKKQVISCNVCQLRFNSDSQAEAHYKGSKHAKKVKALE 201

Query: 658 KTTDEPAAKKTKN 696
            T ++P    +K+
Sbjct: 202 ATKNKPKMVPSKD 214

 Score = 39.3 bits (90), Expect = 0.014
 Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
 Frame = +1

Query: 211 LVKCDVCNVSCSSQTAYEFHMKGKKHTKSLNKIALSSEESKNTSGIISNESKGKSFPVVT 390
           L+ C +C V+ +S +  E H  G KH   +        E++N +G I      KS+P   
Sbjct: 296 LLYCSLCKVAVNSLSQLEAHNTGSKHKTMV--------EARNGAGPI------KSYPRPG 341

Query: 391 VPATIEQSQI---LYNPNLTCEACQVSCSKLDQLQKHLEGARHQKKM 522
               ++       L N    CE C V  +   QL++H+   RH+ ++
Sbjct: 342 SRLKVQNGSKGSGLQNKMFHCEICDVHVNSEIQLKQHISSRRHKDRV 388

 Score = 38.9 bits (89), Expect = 0.018
 Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
 Frame = +1

Query: 199 KKGFLVKCDVCNVSCSSQTAYEFHMKGKKHTKSLNKIALSSEESKNTSGIISNESKGKSF 378
           KK  ++ C+VC +  +S +  E H KG KH K +  +    E +KN   ++ ++   K+ 
Sbjct: 164 KKKQVISCNVCQLRFNSDSQAEAHYKGSKHAKKVKAL----EATKNKPKMVPSKDSAKAN 219

Query: 379 PVVTV-PATIEQS 414
           P  ++ P T + S
Sbjct: 220 PSCSIRPGTGDSS 232
>sp|Q6AXX3|ZN659_RAT Zinc finger protein 659
          Length = 395

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 44/220 (20%), Positives = 84/220 (38%), Gaps = 21/220 (9%)
 Frame = +1

Query: 196 NKKGFLVKCDVCNVSCSSQTAYEFHMKGKKHTKSLNKIALSSEESKNTSGIISNESKGKS 375
           ++K  ++ C++C +  +S +    H KG KH K L   AL S ++K  S    + +K   
Sbjct: 74  HRKKQIISCNICQLRFNSDSQAAAHYKGTKHAKKLK--ALESMKNKQKSVTAKDSAKTTF 131

Query: 376 FPVVTVPATIEQ--------SQILYNPNLTCEACQVSCSKLDQLQKHLEGARHQKKMKFN 531
             + T P T           +Q++       ++ +V+       +K L  A         
Sbjct: 132 TSITTNPITTSSDKTESTAGTQVIARSADMRKSSEVTTELTSNAEKSLTAAVAAGNNSSP 191

Query: 532 KFIELKNKKDPSVYCDICDLCMTEES-MKLHKTSGKHK-----RKSTDKTTDEP-AAKKT 690
                + K    +YC +C + +   S ++ H +  KHK     R  +      P A  K 
Sbjct: 192 PTETEEEKAKRLLYCSLCKVAVNSASQLEAHNSGTKHKTMLEARNGSGTIKAFPRAGMKG 251

Query: 691 K------NVEIPTTVENCGYCRINFKNTAEAVAHYQTQKH 792
           K      N  +     +C  C ++  +  +   H  +++H
Sbjct: 252 KGPVNKGNTGLQNKTFHCEICDVHVNSETQLKQHISSRRH 291

 Score = 43.5 bits (101), Expect = 7e-04
 Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 10/128 (7%)
 Frame = +1

Query: 211 LVKCDVCNVSCSSQTAYEFHMKGKKHTKSLNKIALSSEESKNTSGIISNESKGKSFPVVT 390
           L+ C +C V+ +S +  E H  G KH   L        E++N SG I      K+FP   
Sbjct: 203 LLYCSLCKVAVNSASQLEAHNSGTKHKTML--------EARNGSGTI------KAFPRAG 248

Query: 391 VPA---TIEQSQILYNPNLTCEACQVSCSKLDQLQKHLEGARHQ-------KKMKFNKFI 540
           +       + +  L N    CE C V  +   QL++H+   RH+        K K++ + 
Sbjct: 249 MKGKGPVNKGNTGLQNKTFHCEICDVHVNSETQLKQHISSRRHKDRASGKPPKPKYSPYN 308

Query: 541 ELKNKKDP 564
           +L+    P
Sbjct: 309 KLQKAAHP 316
>sp|Q90Y35|ZN622_CHICK Zinc finger protein 622 (Zn-finger protein C47)
          Length = 405

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 10/105 (9%)
 Frame = +1

Query: 49  SNYRCVACNVFFSNFDEQKQHYFT-YHSRSV-----DQGTFTAPMYSQ----YRQLSGTN 198
           + Y C+ C V F + D Q+ HY T +H  ++     D    TA  + +     R ++   
Sbjct: 2   ATYTCITCRVAFKDADIQRAHYKTDWHRYNLKRKVADMPPVTAENFQERVLAQRAVAEER 61

Query: 199 KKGFLVKCDVCNVSCSSQTAYEFHMKGKKHTKSLNKIALSSEESK 333
            K     C VC+   S+  AYE H+K KKH + L K A+ +   K
Sbjct: 62  DKVTATYCTVCSKRFSTFNAYENHLKSKKHLE-LEKKAVQAVSKK 105
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,066,228
Number of Sequences: 369166
Number of extensions: 1683685
Number of successful extensions: 5789
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5682
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8293644780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)